AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene46927

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46927.t1 MTR_4g065080 94.787 422 18 2 1 419 1 421 0.0 785
MS.gene46927.t1 MTR_2g098240 62.438 402 100 8 4 401 6 360 8.00e-171 483
MS.gene46927.t1 MTR_8g011780 43.236 377 167 8 10 369 15 361 1.61e-98 301
MS.gene46927.t1 MTR_7g053200 39.378 386 211 6 10 391 8 374 8.72e-93 286
MS.gene46927.t1 MTR_7g104180 39.037 374 203 7 10 373 489 847 1.27e-76 255
MS.gene46927.t1 MTR_1g060790 39.572 374 193 9 10 369 467 821 3.25e-76 253
MS.gene46927.t1 MTR_2g085065 38.968 349 190 7 21 359 97 432 7.83e-76 243
MS.gene46927.t1 MTR_3g010260 39.418 378 198 9 10 373 412 772 8.46e-76 251
MS.gene46927.t1 MTR_4g113790 38.342 386 194 10 12 370 90 458 2.47e-75 243
MS.gene46927.t1 MTR_7g033640 37.435 382 196 9 10 369 229 589 1.41e-74 244
MS.gene46927.t1 MTR_2g027240 38.624 378 197 9 10 369 201 561 2.17e-74 243
MS.gene46927.t1 MTR_8g446990 36.979 384 197 8 10 373 129 487 3.11e-74 241
MS.gene46927.t1 MTR_2g062850 37.500 400 182 11 10 380 166 526 3.54e-74 242
MS.gene46927.t1 MTR_2g018990 37.466 371 204 7 10 370 74 426 3.59e-74 239
MS.gene46927.t1 MTR_6g004720 37.802 373 200 8 10 369 248 601 5.47e-74 243
MS.gene46927.t1 MTR_8g006870 39.118 363 191 8 10 359 367 712 1.53e-72 242
MS.gene46927.t1 MTR_7g081665 38.441 372 199 8 10 369 361 714 3.83e-72 241
MS.gene46927.t1 MTR_8g089420 37.903 372 201 9 10 369 70 423 5.80e-72 233
MS.gene46927.t1 MTR_2g095980 39.726 365 172 6 9 370 367 686 1.99e-69 233
MS.gene46927.t1 MTR_8g070530 36.188 362 176 7 9 367 593 902 2.79e-68 233
MS.gene46927.t1 MTR_2g095980 39.726 365 172 6 9 370 622 941 3.05e-68 233
MS.gene46927.t1 MTR_2g095980 39.726 365 172 6 9 370 622 941 7.44e-68 233
MS.gene46927.t1 MTR_2g069990 38.904 365 177 10 10 366 91 417 2.58e-67 222
MS.gene46927.t1 MTR_4g061610 39.091 330 145 7 47 370 666 945 1.18e-64 223
MS.gene46927.t1 MTR_6g470940 32.507 363 189 10 12 370 874 1184 7.44e-50 182
MS.gene46927.t1 MTR_5g069000 30.653 398 211 13 12 398 760 1103 4.53e-45 167
MS.gene46927.t1 MTR_1g019340 30.833 360 201 11 9 362 102 419 8.07e-45 162
MS.gene46927.t1 MTR_4g035835 30.402 398 212 13 12 398 756 1099 8.13e-45 167
MS.gene46927.t1 MTR_1g019340 30.833 360 201 11 9 362 102 419 1.14e-44 162
MS.gene46927.t1 MTR_2g040150 31.111 360 199 12 12 361 110 430 1.06e-43 160
MS.gene46927.t1 MTR_1g069735 28.649 370 215 11 10 374 115 440 1.73e-41 153
MS.gene46927.t1 MTR_1g069735 28.649 370 215 11 10 374 115 440 2.07e-41 152
MS.gene46927.t1 MTR_1g069735 28.649 370 215 11 10 374 115 440 5.48e-41 153
MS.gene46927.t1 MTR_3g104700 28.726 369 198 10 12 362 91 412 9.55e-41 151
MS.gene46927.t1 MTR_7g097150 28.495 372 213 12 10 374 115 440 6.76e-40 150
MS.gene46927.t1 MTR_1g075880 27.520 367 218 10 13 374 115 438 4.55e-38 144
MS.gene46927.t1 MTR_3g104700 27.720 386 197 11 12 362 91 429 7.13e-38 144
MS.gene46927.t1 MTR_1g442790 26.893 383 211 12 8 374 103 432 2.31e-37 142
MS.gene46927.t1 MTR_1g442790 26.893 383 211 12 8 374 103 432 2.61e-37 142
MS.gene46927.t1 MTR_1g042700 27.763 371 222 10 8 374 108 436 3.09e-37 142
MS.gene46927.t1 MTR_1g090917 28.021 389 204 10 6 392 42 356 4.14e-28 116
MS.gene46927.t1 MTR_1g090917 28.286 350 178 8 12 359 48 326 4.68e-28 116
MS.gene46927.t1 MTR_7g073520 35.152 165 98 3 12 176 145 300 1.11e-24 106
MS.gene46927.t1 MTR_7g073520 40.769 130 70 4 245 369 296 423 3.04e-21 95.9
MS.gene46927.t1 MTR_4g107280 35.625 160 99 3 14 172 88 244 1.10e-23 102
MS.gene46927.t1 MTR_4g107280 39.259 135 72 5 249 378 248 377 1.98e-21 95.9
MS.gene46927.t1 MTR_1g090917 29.630 297 140 8 98 392 2 231 1.21e-23 101
MS.gene46927.t1 MTR_1g090917 29.924 264 119 6 98 359 2 201 1.76e-23 101
MS.gene46927.t1 MTR_4g107280 39.370 127 70 4 249 370 209 333 1.31e-21 96.3
MS.gene46927.t1 MTR_4g107280 30.625 160 68 3 14 172 88 205 8.04e-15 75.9
MS.gene46927.t1 MTR_2g020380 30.939 181 105 4 12 192 1 161 7.23e-17 83.6
MS.gene46927.t1 MTR_6g087000 33.784 148 80 5 249 381 911 1055 9.22e-17 83.2
MS.gene46927.t1 MTR_3g088715 39.450 109 55 3 249 352 24 126 1.44e-16 76.3
MS.gene46927.t1 MTR_5g045190 29.050 179 111 5 21 193 245 413 2.10e-16 82.0
MS.gene46927.t1 MTR_7g113490 29.677 155 103 3 19 172 72 221 1.35e-14 76.3
MS.gene46927.t1 MTR_2g016340 30.573 157 99 3 19 175 16 162 2.67e-14 74.7
MS.gene46927.t1 MTR_8g035890 38.136 118 64 3 244 354 161 276 2.98e-14 73.2
MS.gene46927.t1 MTR_8g035890 26.543 162 108 4 9 169 10 161 2.52e-11 64.3
MS.gene46927.t1 MTR_3g466400 26.257 179 117 5 19 195 18 183 3.58e-14 74.3
MS.gene46927.t1 MTR_3g110405 29.747 158 102 3 12 169 34 182 4.44e-14 72.8
MS.gene46927.t1 MTR_3g110405 36.667 90 54 1 250 336 188 277 1.67e-12 68.2
MS.gene46927.t1 MTR_1g105290 29.677 155 103 3 19 172 59 208 6.76e-14 73.9
MS.gene46927.t1 MTR_1g105290 29.677 155 103 3 19 172 59 208 8.78e-14 73.6
MS.gene46927.t1 MTR_1g105290 29.677 155 103 3 19 172 59 208 8.79e-14 73.6
MS.gene46927.t1 MTR_1g076370 30.409 171 101 7 3 169 11 167 1.16e-13 72.8
MS.gene46927.t1 MTR_2g005290 31.492 181 99 7 19 188 14 180 1.49e-13 72.0
MS.gene46927.t1 MTR_3g096230 30.539 167 99 4 16 177 245 399 1.61e-13 72.8
MS.gene46927.t1 MTR_7g072575 27.219 169 110 4 1 169 1 156 1.84e-13 72.4
MS.gene46927.t1 MTR_3g466480 26.136 176 116 4 19 190 25 190 1.92e-13 72.0
MS.gene46927.t1 MTR_1g096490 32.749 171 101 6 19 184 34 195 2.21e-13 72.0
MS.gene46927.t1 MTR_7g116390 38.776 98 54 3 245 336 166 263 2.64e-13 70.5
MS.gene46927.t1 MTR_3g096230 30.539 167 99 4 16 177 245 399 2.89e-13 72.0
MS.gene46927.t1 MTR_5g075100 31.126 151 95 3 19 169 27 168 3.83e-13 71.2
MS.gene46927.t1 MTR_8g095440 31.609 174 96 6 21 185 36 195 4.52e-13 71.2
MS.gene46927.t1 MTR_8g086380 28.758 153 95 4 19 169 30 170 4.71e-13 71.2
MS.gene46927.t1 MTR_4g029020 27.815 151 99 3 19 169 16 156 5.23e-13 70.9
MS.gene46927.t1 MTR_8g095440 31.609 174 96 6 21 185 36 195 5.55e-13 70.5
MS.gene46927.t1 MTR_8g040300 36.111 108 62 2 244 348 155 258 5.71e-13 69.3
MS.gene46927.t1 MTR_8g093730 28.834 163 107 3 11 172 295 449 9.77e-13 70.5
MS.gene46927.t1 MTR_3g095620 32.192 146 91 5 51 190 51 194 1.30e-12 68.6
MS.gene46927.t1 MTR_5g075060 28.105 153 96 5 19 169 16 156 2.46e-12 68.9
MS.gene46927.t1 MTR_4g131060 28.105 153 96 4 19 169 22 162 3.61e-12 68.2
MS.gene46927.t1 MTR_8g024100 30.496 141 90 4 48 184 42 178 5.05e-12 68.2
MS.gene46927.t1 MTR_1g048630 27.807 187 119 5 18 203 10 181 5.86e-12 68.2
MS.gene46927.t1 MTR_1g081000 24.862 181 126 4 12 190 1 173 6.02e-12 67.8
MS.gene46927.t1 MTR_6g048250 28.481 158 104 3 12 169 16 164 6.56e-12 67.0
MS.gene46927.t1 MTR_1g081000 25.275 182 124 4 12 190 1 173 6.61e-12 67.8
MS.gene46927.t1 MTR_1g100250 29.375 160 100 4 16 172 412 561 7.11e-12 67.8
MS.gene46927.t1 MTR_7g092360 24.309 181 127 4 12 190 13 185 1.09e-11 67.0
MS.gene46927.t1 MTR_3g101210 30.357 168 109 3 19 185 311 471 1.15e-11 67.0
MS.gene46927.t1 MTR_3g101210 30.357 168 109 3 19 185 311 471 1.21e-11 67.0
MS.gene46927.t1 MTR_6g048250 28.481 158 104 3 12 169 16 164 1.24e-11 66.6
MS.gene46927.t1 MTR_6g048250 27.222 180 121 4 12 190 16 186 1.36e-11 66.2
MS.gene46927.t1 MTR_7g095450 25.275 182 124 4 12 190 1 173 1.57e-11 66.6
MS.gene46927.t1 MTR_1g103760 28.477 151 96 4 19 168 16 155 1.64e-11 66.2
MS.gene46927.t1 MTR_1g080020 34.021 97 59 1 245 336 157 253 1.75e-11 64.7
MS.gene46927.t1 MTR_4g051648 23.464 179 127 4 8 184 1 171 1.84e-11 66.6
MS.gene46927.t1 MTR_3g054080 27.895 190 107 6 19 207 18 178 1.95e-11 65.9
MS.gene46927.t1 MTR_8g024600 28.758 153 96 5 19 169 21 162 2.66e-11 65.5
MS.gene46927.t1 MTR_4g006970 26.797 153 98 4 19 169 24 164 3.32e-11 65.1
MS.gene46927.t1 MTR_5g067150 26.452 155 97 5 19 169 13 154 3.55e-11 65.1
MS.gene46927.t1 MTR_5g067150 26.452 155 97 5 19 169 13 154 3.79e-11 65.1
MS.gene46927.t1 MTR_2g078740 26.471 170 112 4 17 184 17 175 4.73e-11 65.1
MS.gene46927.t1 MTR_5g067150 26.452 155 97 5 19 169 13 154 4.80e-11 64.3
MS.gene46927.t1 MTR_2g078740 26.471 170 112 4 17 184 17 175 4.90e-11 65.1
MS.gene46927.t1 MTR_1g052115 26.061 165 109 6 12 173 1 155 4.96e-11 65.5
MS.gene46927.t1 MTR_2g078740 26.471 170 112 4 17 184 17 175 5.08e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46927.t1 AT1G51170 59.756 410 124 9 6 406 13 390 1.11e-164 469
MS.gene46927.t1 AT3G20830 57.783 424 134 9 10 419 16 408 4.13e-160 457
MS.gene46927.t1 AT3G25250 43.351 376 173 6 10 378 12 354 1.16e-99 303
MS.gene46927.t1 AT4G13000 42.368 380 175 6 10 384 15 355 8.08e-99 300
MS.gene46927.t1 AT3G44610 40.974 349 194 5 21 359 75 421 1.73e-82 260
MS.gene46927.t1 AT3G12690 38.386 409 217 13 9 408 179 561 5.22e-81 260
MS.gene46927.t1 AT3G12690 38.386 409 217 13 9 408 179 561 5.22e-81 260
MS.gene46927.t1 AT3G12690 38.386 409 217 13 9 408 179 561 5.22e-81 260
MS.gene46927.t1 AT5G03640 40.957 376 198 10 10 373 536 899 4.57e-79 262
MS.gene46927.t1 AT5G03640 40.957 376 198 10 10 373 536 899 4.57e-79 262
MS.gene46927.t1 AT2G26700 37.681 414 191 10 10 369 82 482 1.50e-78 252
MS.gene46927.t1 AT2G36350 40.204 393 205 9 10 386 554 932 1.88e-78 261
MS.gene46927.t1 AT3G52890 40.415 386 198 10 10 377 533 904 5.96e-78 259
MS.gene46927.t1 AT3G52890 40.415 386 198 10 10 377 533 904 5.96e-78 259
MS.gene46927.t1 AT3G52890 40.415 386 198 10 10 377 533 904 5.96e-78 259
MS.gene46927.t1 AT3G52890 40.415 386 198 10 10 377 533 904 5.96e-78 259
MS.gene46927.t1 AT1G79250 38.642 383 198 9 8 373 139 501 7.53e-78 251
MS.gene46927.t1 AT1G79250 38.642 383 198 9 8 373 139 501 7.53e-78 251
MS.gene46927.t1 AT1G79250 38.642 383 198 9 8 373 139 501 7.53e-78 251
MS.gene46927.t1 AT1G79250 38.642 383 198 9 8 373 139 501 7.53e-78 251
MS.gene46927.t1 AT5G47750 38.501 387 205 9 10 380 186 555 5.95e-77 250
MS.gene46927.t1 AT5G55910 38.564 376 213 7 10 376 104 470 2.05e-76 246
MS.gene46927.t1 AT5G55910 38.564 376 213 7 10 376 104 470 2.05e-76 246
MS.gene46927.t1 AT1G16440 36.968 376 203 8 8 373 106 457 7.71e-76 244
MS.gene46927.t1 AT5G40030 38.442 385 189 10 9 373 108 464 2.71e-75 243
MS.gene46927.t1 AT2G44830 39.840 374 202 7 10 373 358 718 6.51e-75 248
MS.gene46927.t1 AT2G44830 39.840 374 202 7 10 373 358 718 6.51e-75 248
MS.gene46927.t1 AT2G44830 39.840 374 202 7 10 373 358 718 6.51e-75 248
MS.gene46927.t1 AT4G26610 37.795 381 199 10 10 373 118 477 1.59e-74 241
MS.gene46927.t1 AT2G34650 38.587 368 194 10 10 370 70 412 3.83e-73 236
MS.gene46927.t1 AT5G58140 38.827 358 154 7 12 361 574 874 3.69e-72 243
MS.gene46927.t1 AT5G58140 38.462 364 159 7 12 367 574 880 3.81e-72 243
MS.gene46927.t1 AT5G58140 38.462 364 159 7 12 367 574 880 3.81e-72 243
MS.gene46927.t1 AT5G58140 38.462 364 159 7 12 367 574 880 3.81e-72 243
MS.gene46927.t1 AT5G58140 38.462 364 159 7 12 367 574 880 3.81e-72 243
MS.gene46927.t1 AT5G58140 38.462 364 159 7 12 367 574 880 3.81e-72 243
MS.gene46927.t1 AT3G27580 35.787 394 229 8 10 392 177 557 9.52e-72 236
MS.gene46927.t1 AT3G27580 35.787 394 229 8 10 392 177 557 9.52e-72 236
MS.gene46927.t1 AT1G53700 39.612 361 180 10 10 366 88 414 1.15e-70 230
MS.gene46927.t1 AT3G17850 32.086 374 194 10 3 370 870 1189 1.26e-47 175
MS.gene46927.t1 AT1G45160 32.418 364 186 12 10 369 665 972 2.19e-45 168
MS.gene46927.t1 AT1G45160 32.418 364 186 12 10 369 665 972 1.17e-44 166
MS.gene46927.t1 AT5G62310 29.843 382 206 11 12 386 751 1077 2.08e-42 160
MS.gene46927.t1 AT5G09890 30.362 359 206 11 9 362 96 415 3.31e-42 155
MS.gene46927.t1 AT5G09890 30.447 358 205 11 10 362 97 415 3.80e-42 155
MS.gene46927.t1 AT1G30640 28.042 378 225 10 9 379 21 358 1.06e-41 153
MS.gene46927.t1 AT1G30640 28.042 378 225 10 9 379 114 451 3.82e-41 154
MS.gene46927.t1 AT1G30640 28.042 378 225 10 9 379 114 451 3.82e-41 154
MS.gene46927.t1 AT4G33080 27.493 371 205 9 10 362 89 413 8.61e-41 152
MS.gene46927.t1 AT4G33080 27.493 371 205 9 10 362 89 413 8.68e-41 152
MS.gene46927.t1 AT2G19400 28.846 364 210 11 10 362 100 425 1.29e-38 146
MS.gene46927.t1 AT3G10540 31.003 329 160 7 43 369 67 330 2.00e-38 145
MS.gene46927.t1 AT5G04510 30.028 353 174 8 19 369 48 329 3.19e-38 143
MS.gene46927.t1 AT5G04510 30.028 353 174 8 19 369 48 329 7.02e-38 143
MS.gene46927.t1 AT3G45780 57.025 121 48 2 251 368 849 968 2.06e-37 145
MS.gene46927.t1 AT3G45780 41.875 160 86 2 10 169 658 810 1.99e-31 127
MS.gene46927.t1 AT3G45780 57.025 121 48 2 251 368 849 968 2.06e-37 145
MS.gene46927.t1 AT3G45780 41.875 160 86 2 10 169 658 810 1.99e-31 127
MS.gene46927.t1 AT3G23310 27.419 372 214 12 13 374 118 443 2.39e-37 143
MS.gene46927.t1 AT4G14350 26.415 371 217 11 13 374 117 440 3.04e-36 140
MS.gene46927.t1 AT4G14350 26.415 371 217 11 13 374 117 440 3.74e-36 139
MS.gene46927.t1 AT4G14350 26.415 371 217 11 13 374 117 440 3.74e-36 139
MS.gene46927.t1 AT4G14350 26.415 371 217 11 13 374 117 440 3.74e-36 139
MS.gene46927.t1 AT1G03920 27.493 371 212 10 13 374 22 344 6.60e-36 137
MS.gene46927.t1 AT1G03920 27.200 375 216 10 9 374 131 457 2.52e-35 137
MS.gene46927.t1 AT1G03920 27.200 375 216 10 9 374 131 457 2.52e-35 137
MS.gene46927.t1 AT2G20470 27.901 362 207 12 20 374 129 443 2.30e-34 134
MS.gene46927.t1 AT2G20470 27.419 372 216 12 10 374 119 443 3.16e-34 134
MS.gene46927.t1 AT2G20470 27.419 372 216 12 10 374 119 443 3.16e-34 134
MS.gene46927.t1 AT3G14370 52.500 120 52 3 251 366 292 410 1.96e-33 131
MS.gene46927.t1 AT3G14370 40.123 162 90 2 10 171 83 237 2.99e-29 119
MS.gene46927.t1 AT5G04510 28.882 322 157 7 19 339 48 298 8.57e-31 120
MS.gene46927.t1 AT3G08720 45.802 131 63 5 245 370 288 415 5.18e-26 110
MS.gene46927.t1 AT3G08720 34.545 165 99 3 12 176 137 292 6.69e-24 103
MS.gene46927.t1 AT3G08720 45.802 131 63 5 245 370 288 415 5.18e-26 110
MS.gene46927.t1 AT3G08720 34.545 165 99 3 12 176 137 292 6.69e-24 103
MS.gene46927.t1 AT3G08720 45.802 131 63 5 245 370 288 415 5.18e-26 110
MS.gene46927.t1 AT3G08720 34.545 165 99 3 12 176 137 292 6.69e-24 103
MS.gene46927.t1 AT3G08720 45.802 131 63 5 245 370 288 415 5.18e-26 110
MS.gene46927.t1 AT3G08720 34.545 165 99 3 12 176 137 292 6.69e-24 103
MS.gene46927.t1 AT3G08730 45.385 130 63 5 245 369 282 408 1.47e-25 108
MS.gene46927.t1 AT3G08730 35.758 165 97 3 12 176 131 286 3.74e-25 107
MS.gene46927.t1 AT3G08730 45.385 130 63 5 245 369 282 408 1.47e-25 108
MS.gene46927.t1 AT3G08730 35.758 165 97 3 12 176 131 286 3.74e-25 107
MS.gene46927.t1 AT1G48490 40.650 123 63 4 253 369 1011 1129 5.67e-23 102
MS.gene46927.t1 AT1G48490 34.161 161 97 3 10 170 824 975 4.00e-20 93.6
MS.gene46927.t1 AT1G48490 40.650 123 63 4 253 369 1010 1128 5.94e-23 102
MS.gene46927.t1 AT1G48490 34.161 161 97 3 10 170 823 974 4.11e-20 93.6
MS.gene46927.t1 AT1G48490 40.650 123 63 4 253 369 1010 1128 5.94e-23 102
MS.gene46927.t1 AT1G48490 34.161 161 97 3 10 170 823 974 4.11e-20 93.6
MS.gene46927.t1 AT1G48490 40.650 123 63 4 253 369 1010 1128 5.94e-23 102
MS.gene46927.t1 AT1G48490 34.161 161 97 3 10 170 823 974 4.11e-20 93.6
MS.gene46927.t1 AT2G20050 40.000 125 65 4 241 360 925 1044 2.92e-20 94.0
MS.gene46927.t1 AT2G20050 40.000 125 65 4 241 360 928 1047 2.92e-20 94.0
MS.gene46927.t1 AT5G18700 32.716 162 94 3 12 173 1 147 1.33e-18 89.0
MS.gene46927.t1 AT2G45490 40.000 100 57 1 244 340 167 266 3.95e-16 79.0
MS.gene46927.t1 AT2G45490 30.667 150 93 5 21 169 28 167 1.82e-13 70.9
MS.gene46927.t1 AT1G54960 31.646 158 96 3 19 172 72 221 5.14e-16 80.5
MS.gene46927.t1 AT1G54960 31.646 158 96 3 19 172 72 221 5.14e-16 80.5
MS.gene46927.t1 AT1G09000 29.379 177 110 5 3 172 54 222 5.23e-16 80.5
MS.gene46927.t1 AT1G09000 29.379 177 110 5 3 172 54 222 9.71e-16 79.7
MS.gene46927.t1 AT5G45820 29.677 155 91 4 19 169 16 156 2.80e-15 77.8
MS.gene46927.t1 AT5G25110 22.419 339 179 9 1 336 29 286 1.35e-14 75.9
MS.gene46927.t1 AT3G06030 29.609 179 104 4 3 172 56 221 2.98e-14 75.1
MS.gene46927.t1 AT1G69220 28.916 166 106 4 21 184 255 410 6.77e-14 74.3
MS.gene46927.t1 AT1G49180 35.294 119 71 3 70 184 54 170 8.11e-14 72.8
MS.gene46927.t1 AT2G45490 30.667 150 93 5 21 169 28 167 9.78e-14 71.2
MS.gene46927.t1 AT2G45490 43.750 64 36 0 244 307 167 230 1.91e-12 67.4
MS.gene46927.t1 AT1G49180 34.400 125 76 3 70 190 54 176 1.07e-13 72.8
MS.gene46927.t1 AT4G18700 28.485 165 104 4 7 169 18 170 2.04e-13 72.4
MS.gene46927.t1 AT1G69220 28.161 174 113 4 13 184 220 383 3.21e-13 72.0
MS.gene46927.t1 AT2G34180 28.402 169 107 4 3 169 45 201 4.40e-13 71.2
MS.gene46927.t1 AT2G25090 26.829 164 112 3 12 175 12 167 4.47e-13 71.2
MS.gene46927.t1 AT2G30360 27.815 151 101 3 19 169 25 167 4.60e-13 70.9
MS.gene46927.t1 AT5G57630 28.402 169 109 4 19 187 16 172 5.65e-13 70.5
MS.gene46927.t1 AT4G26070 30.220 182 106 6 4 177 39 207 5.93e-13 70.1
MS.gene46927.t1 AT5G57630 28.402 169 109 4 19 187 16 172 6.69e-13 70.5
MS.gene46927.t1 AT1G35670 32.955 176 95 7 19 185 30 191 6.78e-13 70.5
MS.gene46927.t1 AT4G26070 30.220 182 106 6 4 177 51 219 6.84e-13 70.1
MS.gene46927.t1 AT4G26070 30.220 182 106 6 4 177 52 220 8.18e-13 69.3
MS.gene46927.t1 AT2G26980 29.801 151 97 3 19 169 18 159 8.24e-13 70.1
MS.gene46927.t1 AT2G26980 29.801 151 97 3 19 169 18 159 8.40e-13 70.1
MS.gene46927.t1 AT2G26980 29.801 151 97 3 19 169 28 169 9.28e-13 70.1
MS.gene46927.t1 AT4G26070 30.220 182 106 6 4 177 52 220 9.47e-13 69.7
MS.gene46927.t1 AT4G26070 30.220 182 106 6 4 177 52 220 9.47e-13 69.7
MS.gene46927.t1 AT4G24400 29.412 153 95 5 19 169 13 154 1.18e-12 69.7
MS.gene46927.t1 AT4G24400 29.412 153 95 5 19 169 13 154 1.49e-12 69.3
MS.gene46927.t1 AT2G26980 29.801 151 97 3 19 169 18 159 1.52e-12 69.3
MS.gene46927.t1 AT2G25880 37.363 91 54 1 250 337 189 279 1.68e-12 68.2
MS.gene46927.t1 AT2G25880 28.859 149 97 3 21 169 44 183 4.84e-11 63.9
MS.gene46927.t1 AT4G09570 32.386 176 96 7 19 185 29 190 1.75e-12 69.3
MS.gene46927.t1 AT2G25880 37.363 91 54 1 250 337 144 234 1.89e-12 67.4
MS.gene46927.t1 AT2G25880 37.363 91 54 1 250 337 176 266 1.93e-12 67.8
MS.gene46927.t1 AT2G25880 28.859 149 97 3 21 169 31 170 3.48e-11 64.3
MS.gene46927.t1 AT2G26980 29.801 151 97 3 19 169 18 159 2.39e-12 67.4
MS.gene46927.t1 AT3G44200 24.581 179 125 4 8 184 1 171 2.64e-12 69.3
MS.gene46927.t1 AT3G44200 24.581 179 125 4 8 184 1 171 2.64e-12 69.3
MS.gene46927.t1 AT3G63280 25.824 182 123 4 12 190 1 173 2.88e-12 68.9
MS.gene46927.t1 AT3G63280 25.824 182 123 4 12 190 1 173 2.88e-12 68.9
MS.gene46927.t1 AT3G63280 25.824 182 123 4 12 190 1 173 2.88e-12 68.9
MS.gene46927.t1 AT2G25880 37.363 91 54 1 250 337 237 327 2.92e-12 68.2
MS.gene46927.t1 AT2G25880 28.859 149 97 3 21 169 92 231 9.75e-11 63.2
MS.gene46927.t1 AT5G01810 27.815 151 99 3 19 169 16 156 3.69e-12 68.2
MS.gene46927.t1 AT5G01810 27.815 151 99 3 19 169 16 156 3.69e-12 68.2
MS.gene46927.t1 AT3G63280 25.543 184 125 4 10 190 53 227 4.59e-12 68.2
MS.gene46927.t1 AT5G01810 27.815 151 99 3 19 169 16 156 5.16e-12 67.4
MS.gene46927.t1 AT3G04810 24.862 181 126 4 12 190 1 173 5.46e-12 68.2
MS.gene46927.t1 AT3G04810 24.862 181 126 4 12 190 1 173 5.46e-12 68.2
MS.gene46927.t1 AT3G04810 24.862 181 126 4 12 190 1 173 5.46e-12 68.2
MS.gene46927.t1 AT5G45810 26.797 153 98 4 19 169 32 172 5.47e-12 67.8
MS.gene46927.t1 AT1G29230 27.451 153 97 4 19 169 78 218 7.31e-12 67.4
MS.gene46927.t1 AT1G18350 27.607 163 102 4 10 170 40 188 7.53e-12 66.2
MS.gene46927.t1 AT1G01140 27.108 166 112 4 4 169 8 164 8.36e-12 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 8.50e-12 67.4
MS.gene46927.t1 AT3G04530 35.789 95 56 1 247 336 164 258 8.59e-12 65.9
MS.gene46927.t1 AT5G21326 28.049 164 109 3 6 169 4 158 8.63e-12 67.0
MS.gene46927.t1 AT3G17510 28.846 156 92 4 19 169 24 165 8.83e-12 67.0
MS.gene46927.t1 AT1G01140 27.108 166 112 4 4 169 8 164 9.19e-12 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 1.05e-11 67.0
MS.gene46927.t1 AT1G01140 27.108 166 112 4 4 169 8 164 1.06e-11 67.0
MS.gene46927.t1 AT5G66850 30.409 171 107 4 7 172 334 497 1.13e-11 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 1.25e-11 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 1.26e-11 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 1.31e-11 67.0
MS.gene46927.t1 AT1G53570 28.931 159 102 4 16 172 215 364 1.31e-11 67.0
MS.gene46927.t1 AT5G66850 30.409 171 107 4 7 172 334 497 1.38e-11 67.0
MS.gene46927.t1 AT5G28290 24.000 175 124 3 12 185 1 167 1.43e-11 66.6
MS.gene46927.t1 AT4G32830 28.481 158 104 3 12 169 28 176 1.52e-11 65.5
MS.gene46927.t1 AT4G32830 35.556 90 55 1 250 336 182 271 3.70e-11 64.3
MS.gene46927.t1 AT1G54510 23.757 181 128 4 12 190 1 173 1.52e-11 66.6
MS.gene46927.t1 AT1G54510 23.757 181 128 4 12 190 1 173 1.52e-11 66.6
MS.gene46927.t1 AT1G54510 23.757 181 128 4 12 190 1 173 1.52e-11 66.6
MS.gene46927.t1 AT1G54510 23.757 181 128 4 12 190 1 173 1.52e-11 66.6
MS.gene46927.t1 AT5G28290 24.000 175 124 3 12 185 1 167 1.59e-11 66.6
MS.gene46927.t1 AT5G28290 24.000 175 124 3 12 185 1 167 1.59e-11 66.6
MS.gene46927.t1 AT1G07150 32.026 153 87 6 20 166 14 155 1.80e-11 66.2
MS.gene46927.t1 AT5G10930 23.841 151 106 2 19 169 16 157 2.07e-11 65.9
MS.gene46927.t1 AT1G08650 38.298 94 53 2 248 336 169 262 2.25e-11 64.7
MS.gene46927.t1 AT3G01090 26.543 162 110 3 8 169 35 187 2.27e-11 65.9
MS.gene46927.t1 AT1G08650 37.113 97 56 2 245 336 166 262 2.41e-11 64.7
MS.gene46927.t1 AT3G01090 26.543 162 110 3 8 169 12 164 2.41e-11 65.9
MS.gene46927.t1 AT3G01090 26.543 162 110 3 8 169 12 164 2.41e-11 65.9
MS.gene46927.t1 AT2G32510 28.125 192 110 8 19 203 7 177 2.59e-11 65.1
MS.gene46927.t1 AT1G07150 32.026 153 87 6 20 166 28 169 2.63e-11 65.9
MS.gene46927.t1 AT4G14480 27.273 165 114 3 8 172 6 164 2.93e-11 65.5
MS.gene46927.t1 AT2G37840 27.083 144 97 4 45 184 36 175 3.85e-11 65.5
MS.gene46927.t1 AT5G35410 28.205 156 93 5 19 169 15 156 4.05e-11 64.7
MS.gene46927.t1 AT5G14720 29.814 161 102 5 10 169 11 161 4.17e-11 65.5
MS.gene46927.t1 AT5G14720 29.814 161 102 5 10 169 11 161 4.17e-11 65.5
MS.gene46927.t1 AT5G35410 28.205 156 93 5 19 169 15 156 5.05e-11 64.7
MS.gene46927.t1 AT5G58950 29.915 117 80 1 53 169 243 357 5.10e-11 64.7
MS.gene46927.t1 AT3G07980 30.000 170 101 6 21 184 26 183 5.14e-11 65.5
MS.gene46927.t1 AT3G07980 30.000 170 101 6 21 184 26 183 5.44e-11 65.5
MS.gene46927.t1 AT1G53050 33.333 132 65 3 70 187 181 303 6.70e-11 64.7
MS.gene46927.t1 AT1G53050 33.333 132 65 3 70 187 181 303 6.70e-11 64.7

Find 131 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACATACGAAATGCTTTA+TGG 0.124822 4.3:-38353872 MS.gene46927:CDS
TTATGGTACAACACCGTTTA+AGG 0.147798 4.3:-38353855 MS.gene46927:CDS
GACTGGTGGTGTGGGTATTA+AGG 0.276142 4.3:-38353558 MS.gene46927:CDS
CCTTTCCTCCCTTCAATCCT+TGG 0.281062 4.3:-38354481 MS.gene46927:CDS
GTGGTGGTTGTTGTGGTGGT+GGG 0.296295 4.3:+38354616 None:intergenic
GAGGAAAGGATGGGAGAGGG+TGG 0.309672 4.3:+38354495 None:intergenic
GGTGGTGGTTGTTGTGGTGG+TGG 0.317285 4.3:+38354615 None:intergenic
GGGAGAGGGTGGAGAGGACT+TGG 0.327997 4.3:+38354506 None:intergenic
GAATAACCTAATCTCTTCTT+AGG 0.330840 4.3:+38353725 None:intergenic
GATTCTGGAAACTTTGAATC+TGG 0.336949 4.3:+38354154 None:intergenic
CGCTGAACGTCGCGCCCGTT+GGG 0.357408 4.3:-38354533 MS.gene46927:CDS
GATTCGGCCGCCGTTTCTTC+CGG 0.357637 4.3:-38353633 MS.gene46927:CDS
TTGTTGTGGTGGTGGGGTTG+TGG 0.370614 4.3:+38354623 None:intergenic
TTCCGGTCACGTCACGTTAA+CGG 0.379675 4.3:-38354248 MS.gene46927:CDS
AGCTCCAATGGTGGTGGAGC+TGG 0.382912 4.3:+38354712 None:intergenic
GCCGTTGATTGGTGGGCGCT+AGG 0.384672 4.3:-38353899 MS.gene46927:CDS
TGGTGGTGGGGTTGTGGACG+AGG 0.393844 4.3:+38354629 None:intergenic
TTCCTATTCTTCCCCTTAAA+CGG 0.397634 4.3:+38353842 None:intergenic
ACGCTGAACGTCGCGCCCGT+TGG 0.403364 4.3:-38354534 MS.gene46927:CDS
TATGGTACAACACCGTTTAA+GGG 0.404386 4.3:-38353854 MS.gene46927:CDS
AGGTCACCACCGGGACAATA+AGG 0.412366 4.3:+38354421 None:intergenic
GCGACGTTCAGCGTCGAGTT+TGG 0.419935 4.3:+38354543 None:intergenic
CACCGTTTAAGGGGAAGAAT+AGG 0.424851 4.3:-38353844 MS.gene46927:CDS
ATATATTGACGGAGGTGATT+CGG 0.426007 4.3:-38353649 MS.gene46927:CDS
TCGTCGGAGAAGTTATCAAA+TGG 0.438085 4.3:-38353581 MS.gene46927:CDS
AAAGAGGGTGATGTTGGTGG+TGG 0.449154 4.3:+38354600 None:intergenic
TCTCGACCACCTTCATTCAA+TGG 0.449496 4.3:-38354317 MS.gene46927:CDS
AAGGATCCTAAGAAGAGATT+AGG 0.449695 4.3:-38353731 MS.gene46927:CDS
CCGGAGGTTGTTCGCGGCGA+TGG 0.450150 4.3:-38353932 MS.gene46927:CDS
GACACGAGTTTGCCGTTGAT+TGG 0.450162 4.3:-38353910 MS.gene46927:CDS
GATGTTGGTGGTGGTTGTTG+TGG 0.454610 4.3:+38354609 None:intergenic
GTCGAGTTTGGCGTGGATAG+AGG 0.454885 4.3:+38354555 None:intergenic
AAGGATGGGAGAGGGTGGAG+AGG 0.454887 4.3:+38354500 None:intergenic
GGATTTGATAGAGAAATTGT+TGG 0.456111 4.3:-38353756 MS.gene46927:CDS
CGAGATACGACGATGATGCC+GGG 0.457242 4.3:-38353610 MS.gene46927:CDS
GAGGACTTGGATTTCCCAAC+GGG 0.459252 4.3:+38354519 None:intergenic
CTCGACCACCTTCATTCAAT+GGG 0.459910 4.3:-38354316 MS.gene46927:CDS
AATGTTCTCATACAACATTC+CGG 0.459976 4.3:-38354265 MS.gene46927:CDS
GTTGGTGGTGGTTGTTGTGG+TGG 0.463237 4.3:+38354612 None:intergenic
ATCCGTTAACGTGACGTGAC+CGG 0.467839 4.3:+38354246 None:intergenic
GGATTGAAGGGAGGAAAGGA+TGG 0.474909 4.3:+38354485 None:intergenic
CGAGTTTGCCGTTGATTGGT+GGG 0.475316 4.3:-38353906 MS.gene46927:CDS
GGAAACTTTGAATCTGGTAA+AGG 0.475851 4.3:+38354160 None:intergenic
TCGTATCTCGCCGGAAGAAA+CGG 0.477301 4.3:+38353623 None:intergenic
GAAGATTCAGTTGGAAGAAG+AGG 0.480968 4.3:+38354094 None:intergenic
TGGTGGTTGTTGTGGTGGTG+GGG 0.482994 4.3:+38354617 None:intergenic
TCATATGTGCCAAGGATTGA+AGG 0.487124 4.3:+38354472 None:intergenic
GGATTTCAGCTAGGTAGAAC+CGG 0.488491 4.3:+38354347 None:intergenic
CGTGCATTAGAATTCCGTTA+AGG 0.488881 4.3:+38353475 None:intergenic
GCGAGATACGACGATGATGC+CGG 0.490002 4.3:-38353611 MS.gene46927:CDS
CCATCGCCGCGAACAACCTC+CGG 0.491113 4.3:+38353932 None:intergenic
CCGTTGATTGGTGGGCGCTA+GGG 0.492424 4.3:-38353898 MS.gene46927:CDS
CTTAAAGCATTCAAAATCCT+AGG 0.493116 4.3:-38354676 MS.gene46927:CDS
CGTCGGAGAAGTTATCAAAT+GGG 0.494423 4.3:-38353580 MS.gene46927:CDS
ACGAGTTTGCCGTTGATTGG+TGG 0.494517 4.3:-38353907 MS.gene46927:CDS
TAAGTCGGCACGAGTTAGTC+CGG 0.501622 4.3:-38354029 MS.gene46927:CDS
TGATTATGAGAAGATTCAGT+TGG 0.504069 4.3:+38354085 None:intergenic
ATCCCCACAGTTTCTTGCAT+GGG 0.507388 4.3:-38354449 MS.gene46927:CDS
GGCAAAGAGGGTGATGTTGG+TGG 0.509921 4.3:+38354597 None:intergenic
GGAACCAGCTCCACCACCAT+TGG 0.510209 4.3:-38354716 MS.gene46927:CDS
GATAGAGAAATTGTTGGAGA+AGG 0.514447 4.3:-38353750 MS.gene46927:CDS
TGAGTTTCTCAAACGGCGAA+CGG 0.514898 4.3:-38353991 MS.gene46927:CDS
GCATTCAAAATCCTAGGAAA+AGG 0.515694 4.3:-38354670 MS.gene46927:CDS
AAGGGAGGAAAGGATGGGAG+AGG 0.524691 4.3:+38354491 None:intergenic
ACCGTCGGAATTTCTCTCGT+TGG 0.524921 4.3:-38354120 MS.gene46927:CDS
AGGGAGGAAAGGATGGGAGA+GGG 0.526126 4.3:+38354492 None:intergenic
TAGGGCAAAGAGGGTGATGT+TGG 0.527080 4.3:+38354594 None:intergenic
GATTGAAGGGAGGAAAGGAT+GGG 0.527884 4.3:+38354486 None:intergenic
AATCCCCACAGTTTCTTGCA+TGG 0.528125 4.3:-38354450 MS.gene46927:CDS
TGAATGCTTTAAGATTATCA+AGG 0.538098 4.3:+38354686 None:intergenic
GTCTAACTCGTTCGTCGGAA+CGG 0.541279 4.3:-38353969 MS.gene46927:CDS
TGGGCCCTACCTTATTGTCC+CGG 0.541341 4.3:-38354430 MS.gene46927:CDS
GTTTCACCGGAGGTTGTTCG+CGG 0.542329 4.3:-38353938 MS.gene46927:CDS
TCAAATGGGACTGGTGGTGT+GGG 0.549284 4.3:-38353566 MS.gene46927:CDS
CGAAAATTGAGTTTCTCAAA+CGG 0.549771 4.3:-38353998 MS.gene46927:CDS
ATCAAATGGGACTGGTGGTG+TGG 0.553672 4.3:-38353567 MS.gene46927:CDS
GAGGACATTGAGGTCACCAC+CGG 0.553986 4.3:+38354411 None:intergenic
AGGTCTAGCTCCAATGGTGG+TGG 0.554861 4.3:+38354706 None:intergenic
ATCCTAGGAAAAGGTGCCAT+GGG 0.555020 4.3:-38354661 MS.gene46927:CDS
TAGGGTTAAGTTTACGTGAG+AGG 0.555263 4.3:+38354218 None:intergenic
GAATCTGGTAAAGGTGGTGG+TGG 0.562043 4.3:+38354169 None:intergenic
TTATCAAGGTCTAGCTCCAA+TGG 0.564148 4.3:+38354700 None:intergenic
GAACGGTCTAACTCGTTCGT+CGG 0.570467 4.3:-38353974 MS.gene46927:CDS
GAACTTGAAGAAGGCTAAGT+CGG 0.571455 4.3:-38354044 MS.gene46927:CDS
GAGCGCAGAGGATTTCAGCT+AGG 0.571698 4.3:+38354338 None:intergenic
AACGGAGGAATATGTTTCAC+CGG 0.576639 4.3:-38353951 MS.gene46927:CDS
AATCCTAGGAAAAGGTGCCA+TGG 0.577179 4.3:-38354662 MS.gene46927:CDS
GACGGTAACGGAGGACATTG+AGG 0.580195 4.3:+38354401 None:intergenic
AAACAATGCCCATTGAATGA+AGG 0.581073 4.3:+38354308 None:intergenic
TGTACGTTGGGATATATTGA+CGG 0.584593 4.3:-38353660 MS.gene46927:CDS
CATATGTGCCAAGGATTGAA+GGG 0.586489 4.3:+38354473 None:intergenic
AGGTAGAACCGGACAACGGA+CGG 0.588021 4.3:+38354358 None:intergenic
TGGTGGTGGTGCTGCAACAA+CGG 0.590400 4.3:+38354183 None:intergenic
CCCTAGCGCCCACCAATCAA+CGG 0.593746 4.3:+38353898 None:intergenic
AAATGTGCTGATGAAGTCGC+CGG 0.594698 4.3:-38353807 MS.gene46927:CDS
CCAAGGATTGAAGGGAGGAA+AGG 0.594881 4.3:+38354481 None:intergenic
GACGAGGAAGACAGTGCCCA+TGG 0.596502 4.3:+38354645 None:intergenic
ATGGTACAACACCGTTTAAG+GGG 0.596720 4.3:-38353853 MS.gene46927:CDS
ATGAAGTCGCCGGAGTTCGT+CGG 0.601089 4.3:-38353797 MS.gene46927:CDS
AACTTACAAGACGGCGACGG+CGG 0.601947 4.3:+38353512 None:intergenic
CTCAACTTACAAGACGGCGA+CGG 0.604669 4.3:+38353509 None:intergenic
CACCACCGGGACAATAAGGT+AGG 0.606462 4.3:+38354425 None:intergenic
GAGAAGTTATCAAATGGGAC+TGG 0.607235 4.3:-38353575 MS.gene46927:CDS
GGGCCCATGCAAGAAACTGT+GGG 0.611196 4.3:+38354446 None:intergenic
AAGTTATCAAATGGGACTGG+TGG 0.616181 4.3:-38353572 MS.gene46927:CDS
AGGGCCCATGCAAGAAACTG+TGG 0.617983 4.3:+38354445 None:intergenic
GCATCATCGTCGTATCTCGC+CGG 0.620999 4.3:+38353614 None:intergenic
CAACGGACGGAGAGAAAACA+CGG 0.621535 4.3:+38354371 None:intergenic
GTGGGGATTCATATGTGCCA+AGG 0.621710 4.3:+38354464 None:intergenic
GTTCAGCGTCGAGTTTGGCG+TGG 0.624479 4.3:+38354548 None:intergenic
TAACTCGTTCGTCGGAACGG+AGG 0.625008 4.3:-38353966 MS.gene46927:CDS
CTTCTCCGACGAAAATTCCC+CGG 0.626589 4.3:+38353592 None:intergenic
CAATGCCCATTGAATGAAGG+TGG 0.629498 4.3:+38354311 None:intergenic
AGGACATTGAGGTCACCACC+GGG 0.629962 4.3:+38354412 None:intergenic
AGAGGACTTGGATTTCCCAA+CGG 0.630595 4.3:+38354518 None:intergenic
TTTGAATCTGGTAAAGGTGG+TGG 0.639756 4.3:+38354166 None:intergenic
AGCTAGGTAGAACCGGACAA+CGG 0.647073 4.3:+38354354 None:intergenic
ACCACCGGGACAATAAGGTA+GGG 0.648173 4.3:+38354426 None:intergenic
AACTTTGAATCTGGTAAAGG+TGG 0.650483 4.3:+38354163 None:intergenic
GCCCTACCTTATTGTCCCGG+TGG 0.652832 4.3:-38354427 MS.gene46927:CDS
GGAGGAATATGTTTCACCGG+AGG 0.668658 4.3:-38353948 MS.gene46927:CDS
TCAAGGTCTAGCTCCAATGG+TGG 0.679357 4.3:+38354703 None:intergenic
GAGATACGACGATGATGCCG+GGG 0.680841 4.3:-38353609 MS.gene46927:CDS
AAGAGATTAGGTTATTCACG+TGG 0.689273 4.3:-38353719 MS.gene46927:CDS
TATCTCGCCGGAAGAAACGG+CGG 0.693953 4.3:+38353626 None:intergenic
AATCTTCGCGAAAACACCGT+CGG 0.699149 4.3:-38354135 MS.gene46927:CDS
ATGTGCCAAGGATTGAAGGG+AGG 0.700312 4.3:+38354476 None:intergenic
GGCCCATGCAAGAAACTGTG+GGG 0.713060 4.3:+38354447 None:intergenic
GAAGGTGGTCGAGAGCGCAG+AGG 0.728926 4.3:+38354326 None:intergenic
TCCAACGAGAGAAATTCCGA+CGG 0.753906 4.3:+38354119 None:intergenic
ACGTTGGGATATATTGACGG+AGG 0.766330 4.3:-38353657 MS.gene46927:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GAGAAAAAATGTTTCCTTAA+CGG - chr4.3:38354710-38354729 MS.gene46927:CDS 25.0%
!!! TGAATGCTTTAAGATTATCA+AGG + chr4.3:38353516-38353535 None:intergenic 25.0%
!!! TTTTTTCTCAACTTACAAGA+CGG + chr4.3:38354699-38354718 None:intergenic 25.0%
AATGTTCTCATACAACATTC+CGG - chr4.3:38353934-38353953 MS.gene46927:CDS 30.0%
CGAAAATTGAGTTTCTCAAA+CGG - chr4.3:38354201-38354220 MS.gene46927:CDS 30.0%
CTTACATACGAAATGCTTTA+TGG - chr4.3:38354327-38354346 MS.gene46927:CDS 30.0%
GAATAACCTAATCTCTTCTT+AGG + chr4.3:38354477-38354496 None:intergenic 30.0%
GGATTTGATAGAGAAATTGT+TGG - chr4.3:38354443-38354462 MS.gene46927:CDS 30.0%
TGATTATGAGAAGATTCAGT+TGG + chr4.3:38354117-38354136 None:intergenic 30.0%
! CTTAAAGCATTCAAAATCCT+AGG - chr4.3:38353523-38353542 MS.gene46927:CDS 30.0%
! TGTTGTATGAGAACATTTTC+TGG + chr4.3:38353931-38353950 None:intergenic 30.0%
! TTGAGAAACTCAATTTTCGT+CGG + chr4.3:38354200-38354219 None:intergenic 30.0%
!! AAAGAGCATGCATTTTTCAA+AGG - chr4.3:38354516-38354535 MS.gene46927:CDS 30.0%
!! ATTTTTCAAAGGTGTACGTT+GGG - chr4.3:38354527-38354546 MS.gene46927:CDS 30.0%
!!! ACAACGGTTTTAGAAGTTTT+AGG + chr4.3:38354003-38354022 None:intergenic 30.0%
!!! CAACGGTTTTAGAAGTTTTA+GGG + chr4.3:38354002-38354021 None:intergenic 30.0%
!!! TGAGAACATTTTCTGGTTTT+AGG + chr4.3:38353924-38353943 None:intergenic 30.0%
AAACAATGCCCATTGAATGA+AGG + chr4.3:38353894-38353913 None:intergenic 35.0%
AACTTTGAATCTGGTAAAGG+TGG + chr4.3:38354039-38354058 None:intergenic 35.0%
AAGAGATTAGGTTATTCACG+TGG - chr4.3:38354480-38354499 MS.gene46927:CDS 35.0%
AAGGATCCTAAGAAGAGATT+AGG - chr4.3:38354468-38354487 MS.gene46927:CDS 35.0%
ATATATTGACGGAGGTGATT+CGG - chr4.3:38354550-38354569 MS.gene46927:CDS 35.0%
GATAGAGAAATTGTTGGAGA+AGG - chr4.3:38354449-38354468 MS.gene46927:CDS 35.0%
GCATTCAAAATCCTAGGAAA+AGG - chr4.3:38353529-38353548 MS.gene46927:CDS 35.0%
GGAAACTTTGAATCTGGTAA+AGG + chr4.3:38354042-38354061 None:intergenic 35.0%
TATGGTACAACACCGTTTAA+GGG - chr4.3:38354345-38354364 MS.gene46927:CDS 35.0%
TGTACGTTGGGATATATTGA+CGG - chr4.3:38354539-38354558 MS.gene46927:CDS 35.0%
TTATGGTACAACACCGTTTA+AGG - chr4.3:38354344-38354363 MS.gene46927:CDS 35.0%
TTCCTATTCTTCCCCTTAAA+CGG + chr4.3:38354360-38354379 None:intergenic 35.0%
! GATTCTGGAAACTTTGAATC+TGG + chr4.3:38354048-38354067 None:intergenic 35.0%
!! CATTTTTCAAAGGTGTACGT+TGG - chr4.3:38354526-38354545 MS.gene46927:CDS 35.0%
!! GCATGTTTTGAACTTGAAGA+AGG - chr4.3:38354146-38354165 MS.gene46927:CDS 35.0%
!!! CATTTTCTGGTTTTAGGTCA+CGG + chr4.3:38353918-38353937 None:intergenic 35.0%
AACGGAGGAATATGTTTCAC+CGG - chr4.3:38354248-38354267 MS.gene46927:CDS 40.0%
AAGTTATCAAATGGGACTGG+TGG - chr4.3:38354627-38354646 MS.gene46927:CDS 40.0%
ATGGTACAACACCGTTTAAG+GGG - chr4.3:38354346-38354365 MS.gene46927:CDS 40.0%
CATATGTGCCAAGGATTGAA+GGG + chr4.3:38353729-38353748 None:intergenic 40.0%
CGTCGGAGAAGTTATCAAAT+GGG - chr4.3:38354619-38354638 MS.gene46927:CDS 40.0%
GAACTTGAAGAAGGCTAAGT+CGG - chr4.3:38354155-38354174 MS.gene46927:CDS 40.0%
GAAGATTCAGTTGGAAGAAG+AGG + chr4.3:38354108-38354127 None:intergenic 40.0%
GAGAAGTTATCAAATGGGAC+TGG - chr4.3:38354624-38354643 MS.gene46927:CDS 40.0%
TAGGGTTAAGTTTACGTGAG+AGG + chr4.3:38353984-38354003 None:intergenic 40.0%
TCATATGTGCCAAGGATTGA+AGG + chr4.3:38353730-38353749 None:intergenic 40.0%
TCGTCGGAGAAGTTATCAAA+TGG - chr4.3:38354618-38354637 MS.gene46927:CDS 40.0%
TTTGAATCTGGTAAAGGTGG+TGG + chr4.3:38354036-38354055 None:intergenic 40.0%
! TTATCAAGGTCTAGCTCCAA+TGG + chr4.3:38353502-38353521 None:intergenic 40.0%
!! AGAAAACACGGTCGTTTTGA+CGG + chr4.3:38353819-38353838 None:intergenic 40.0%
!! AGGTTTTGTCGACGACTTTT+AGG + chr4.3:38353627-38353646 None:intergenic 40.0%
!! GGTTTTGTCGACGACTTTTA+GGG + chr4.3:38353626-38353645 None:intergenic 40.0%
AATCCCCACAGTTTCTTGCA+TGG - chr4.3:38353749-38353768 MS.gene46927:CDS 45.0%
AATCTTCGCGAAAACACCGT+CGG - chr4.3:38354064-38354083 MS.gene46927:CDS 45.0%
ACGTTGGGATATATTGACGG+AGG - chr4.3:38354542-38354561 MS.gene46927:CDS 45.0%
AGAGGACTTGGATTTCCCAA+CGG + chr4.3:38353684-38353703 None:intergenic 45.0%
ATCCCCACAGTTTCTTGCAT+GGG - chr4.3:38353750-38353769 MS.gene46927:CDS 45.0%
CAATGCCCATTGAATGAAGG+TGG + chr4.3:38353891-38353910 None:intergenic 45.0%
CACCGTTTAAGGGGAAGAAT+AGG - chr4.3:38354355-38354374 MS.gene46927:CDS 45.0%
CGGAAAAAAGACGGAGTTGA+CGG - chr4.3:38354422-38354441 MS.gene46927:CDS 45.0%
CTCGACCACCTTCATTCAAT+GGG - chr4.3:38353883-38353902 MS.gene46927:CDS 45.0%
GATTGAAGGGAGGAAAGGAT+GGG + chr4.3:38353716-38353735 None:intergenic 45.0%
GGAGTTCGTCGGAAAAAAGA+CGG - chr4.3:38354413-38354432 MS.gene46927:CDS 45.0%
GGATTTCAGCTAGGTAGAAC+CGG + chr4.3:38353855-38353874 None:intergenic 45.0%
TCCAACGAGAGAAATTCCGA+CGG + chr4.3:38354083-38354102 None:intergenic 45.0%
TCTCGACCACCTTCATTCAA+TGG - chr4.3:38353882-38353901 MS.gene46927:CDS 45.0%
TGAGTTTCTCAAACGGCGAA+CGG - chr4.3:38354208-38354227 MS.gene46927:CDS 45.0%
! AAATGTGCTGATGAAGTCGC+CGG - chr4.3:38354392-38354411 MS.gene46927:CDS 45.0%
!! AATCCTAGGAAAAGGTGCCA+TGG - chr4.3:38353537-38353556 MS.gene46927:CDS 45.0%
!! ATCCTAGGAAAAGGTGCCAT+GGG - chr4.3:38353538-38353557 MS.gene46927:CDS 45.0%
!!! GACGACTTTTAGGGCAAAGA+GGG + chr4.3:38353617-38353636 None:intergenic 45.0%
!!! GTCTTTTTTCCGACGAACTC+CGG + chr4.3:38354414-38354433 None:intergenic 45.0%
ACCACCGGGACAATAAGGTA+GGG + chr4.3:38353776-38353795 None:intergenic 50.0%
ACCGTCGGAATTTCTCTCGT+TGG - chr4.3:38354079-38354098 MS.gene46927:CDS 50.0%
AGCTAGGTAGAACCGGACAA+CGG + chr4.3:38353848-38353867 None:intergenic 50.0%
ATCCGTTAACGTGACGTGAC+CGG + chr4.3:38353956-38353975 None:intergenic 50.0%
ATGTGCCAAGGATTGAAGGG+AGG + chr4.3:38353726-38353745 None:intergenic 50.0%
CAACGGACGGAGAGAAAACA+CGG + chr4.3:38353831-38353850 None:intergenic 50.0%
CCAAGGATTGAAGGGAGGAA+AGG + chr4.3:38353721-38353740 None:intergenic 50.0%
CCTTTCCTCCCTTCAATCCT+TGG - chr4.3:38353718-38353737 MS.gene46927:CDS 50.0%
CTCAACTTACAAGACGGCGA+CGG + chr4.3:38354693-38354712 None:intergenic 50.0%
CTTCTCCGACGAAAATTCCC+CGG + chr4.3:38354610-38354629 None:intergenic 50.0%
GAACGGTCTAACTCGTTCGT+CGG - chr4.3:38354225-38354244 MS.gene46927:CDS 50.0%
GACACGAGTTTGCCGTTGAT+TGG - chr4.3:38354289-38354308 MS.gene46927:CDS 50.0%
GAGGACTTGGATTTCCCAAC+GGG + chr4.3:38353683-38353702 None:intergenic 50.0%
GGAGGAATATGTTTCACCGG+AGG - chr4.3:38354251-38354270 MS.gene46927:CDS 50.0%
GGATTGAAGGGAGGAAAGGA+TGG + chr4.3:38353717-38353736 None:intergenic 50.0%
GTCTAACTCGTTCGTCGGAA+CGG - chr4.3:38354230-38354249 MS.gene46927:CDS 50.0%
GTGGGGATTCATATGTGCCA+AGG + chr4.3:38353738-38353757 None:intergenic 50.0%
TAAGTCGGCACGAGTTAGTC+CGG - chr4.3:38354170-38354189 MS.gene46927:CDS 50.0%
TAGGGCAAAGAGGGTGATGT+TGG + chr4.3:38353608-38353627 None:intergenic 50.0%
TCGTATCTCGCCGGAAGAAA+CGG + chr4.3:38354579-38354598 None:intergenic 50.0%
TTCCGGTCACGTCACGTTAA+CGG - chr4.3:38353951-38353970 MS.gene46927:CDS 50.0%
! AAAGAGGGTGATGTTGGTGG+TGG + chr4.3:38353602-38353621 None:intergenic 50.0%
! ACGAGTTTGCCGTTGATTGG+TGG - chr4.3:38354292-38354311 MS.gene46927:CDS 50.0%
! ATCAAATGGGACTGGTGGTG+TGG - chr4.3:38354632-38354651 MS.gene46927:CDS 50.0%
! CGAGTTTGCCGTTGATTGGT+GGG - chr4.3:38354293-38354312 MS.gene46927:CDS 50.0%
! CGGTGTTTTCGCGAAGATTC+TGG + chr4.3:38354063-38354082 None:intergenic 50.0%
! GAATCTGGTAAAGGTGGTGG+TGG + chr4.3:38354033-38354052 None:intergenic 50.0%
! GACTGGTGGTGTGGGTATTA+AGG - chr4.3:38354641-38354660 MS.gene46927:CDS 50.0%
! TCAAATGGGACTGGTGGTGT+GGG - chr4.3:38354633-38354652 MS.gene46927:CDS 50.0%
! TCAAGGTCTAGCTCCAATGG+TGG + chr4.3:38353499-38353518 None:intergenic 50.0%
! TGATGCCGGGGAATTTTCGT+CGG - chr4.3:38354602-38354621 MS.gene46927:CDS 50.0%
! TTTTCTCTCCGTCCGTTGTC+CGG - chr4.3:38353833-38353852 MS.gene46927:CDS 50.0%
!! CACGGTCGTTTTGACGGTAA+CGG + chr4.3:38353813-38353832 None:intergenic 50.0%
!! GATGTTGGTGGTGGTTGTTG+TGG + chr4.3:38353593-38353612 None:intergenic 50.0%
!!! CGACGACTTTTAGGGCAAAG+AGG + chr4.3:38353618-38353637 None:intergenic 50.0%
!!! CTCAATTTTCGTCGGCTCAC+CGG + chr4.3:38354192-38354211 None:intergenic 50.0%
AACTTACAAGACGGCGACGG+CGG + chr4.3:38354690-38354709 None:intergenic 55.0%
AAGGGAGGAAAGGATGGGAG+AGG + chr4.3:38353711-38353730 None:intergenic 55.0%
AGGACATTGAGGTCACCACC+GGG + chr4.3:38353790-38353809 None:intergenic 55.0%
AGGGAGGAAAGGATGGGAGA+GGG + chr4.3:38353710-38353729 None:intergenic 55.0%
AGGGCCCATGCAAGAAACTG+TGG + chr4.3:38353757-38353776 None:intergenic 55.0%
AGGTAGAACCGGACAACGGA+CGG + chr4.3:38353844-38353863 None:intergenic 55.0%
AGGTCACCACCGGGACAATA+AGG + chr4.3:38353781-38353800 None:intergenic 55.0%
ATGAAGTCGCCGGAGTTCGT+CGG - chr4.3:38354402-38354421 MS.gene46927:CDS 55.0%
CACCACCGGGACAATAAGGT+AGG + chr4.3:38353777-38353796 None:intergenic 55.0%
CGAGATACGACGATGATGCC+GGG - chr4.3:38354589-38354608 MS.gene46927:CDS 55.0%
GAGATACGACGATGATGCCG+GGG - chr4.3:38354590-38354609 MS.gene46927:CDS 55.0%
GAGCGCAGAGGATTTCAGCT+AGG + chr4.3:38353864-38353883 None:intergenic 55.0%
GAGGACATTGAGGTCACCAC+CGG + chr4.3:38353791-38353810 None:intergenic 55.0%
GCATCATCGTCGTATCTCGC+CGG + chr4.3:38354588-38354607 None:intergenic 55.0%
GCGAGATACGACGATGATGC+CGG - chr4.3:38354588-38354607 MS.gene46927:CDS 55.0%
GGCAAAGAGGGTGATGTTGG+TGG + chr4.3:38353605-38353624 None:intergenic 55.0%
GGCCCATGCAAGAAACTGTG+GGG + chr4.3:38353755-38353774 None:intergenic 55.0%
GGGCCCATGCAAGAAACTGT+GGG + chr4.3:38353756-38353775 None:intergenic 55.0%
GTCGAGTTTGGCGTGGATAG+AGG + chr4.3:38353647-38353666 None:intergenic 55.0%
GTGGTGGTTGTTGTGGTGGT+GGG + chr4.3:38353586-38353605 None:intergenic 55.0%
GTTTCACCGGAGGTTGTTCG+CGG - chr4.3:38354261-38354280 MS.gene46927:CDS 55.0%
TAACTCGTTCGTCGGAACGG+AGG - chr4.3:38354233-38354252 MS.gene46927:CDS 55.0%
TATCTCGCCGGAAGAAACGG+CGG + chr4.3:38354576-38354595 None:intergenic 55.0%
TGGGCCCTACCTTATTGTCC+CGG - chr4.3:38353769-38353788 MS.gene46927:CDS 55.0%
! AGGTCTAGCTCCAATGGTGG+TGG + chr4.3:38353496-38353515 None:intergenic 55.0%
! TGCCCATGGCACCTTTTCCT+AGG + chr4.3:38353543-38353562 None:intergenic 55.0%
! TGGTGGTTGTTGTGGTGGTG+GGG + chr4.3:38353585-38353604 None:intergenic 55.0%
!! GACGGTAACGGAGGACATTG+AGG + chr4.3:38353801-38353820 None:intergenic 55.0%
!! GGTCGTTTTGACGGTAACGG+AGG + chr4.3:38353810-38353829 None:intergenic 55.0%
!! GTTGGTGGTGGTTGTTGTGG+TGG + chr4.3:38353590-38353609 None:intergenic 55.0%
!! TGGTGGTGGTGCTGCAACAA+CGG + chr4.3:38354019-38354038 None:intergenic 55.0%
!! TTGTTGTGGTGGTGGGGTTG+TGG + chr4.3:38353579-38353598 None:intergenic 55.0%
AAGGATGGGAGAGGGTGGAG+AGG + chr4.3:38353702-38353721 None:intergenic 60.0%
CCCTAGCGCCCACCAATCAA+CGG + chr4.3:38354304-38354323 None:intergenic 60.0%
GACGAGGAAGACAGTGCCCA+TGG + chr4.3:38353557-38353576 None:intergenic 60.0%
GAGGAAAGGATGGGAGAGGG+TGG + chr4.3:38353707-38353726 None:intergenic 60.0%
GATTCGGCCGCCGTTTCTTC+CGG - chr4.3:38354566-38354585 MS.gene46927:CDS 60.0%
GCCCTACCTTATTGTCCCGG+TGG - chr4.3:38353772-38353791 MS.gene46927:CDS 60.0%
GGAACCAGCTCCACCACCAT+TGG - chr4.3:38353483-38353502 MS.gene46927:CDS 60.0%
! CCGTTGATTGGTGGGCGCTA+GGG - chr4.3:38354301-38354320 MS.gene46927:CDS 60.0%
! GCGACGTTCAGCGTCGAGTT+TGG + chr4.3:38353659-38353678 None:intergenic 60.0%
! GGTGGTGGTTGTTGTGGTGG+TGG + chr4.3:38353587-38353606 None:intergenic 60.0%
! GTTCAGCGTCGAGTTTGGCG+TGG + chr4.3:38353654-38353673 None:intergenic 60.0%
!! AGCTCCAATGGTGGTGGAGC+TGG + chr4.3:38353490-38353509 None:intergenic 60.0%
CCATCGCCGCGAACAACCTC+CGG + chr4.3:38354270-38354289 None:intergenic 65.0%
GGGAGAGGGTGGAGAGGACT+TGG + chr4.3:38353696-38353715 None:intergenic 65.0%
! GAAGGTGGTCGAGAGCGCAG+AGG + chr4.3:38353876-38353895 None:intergenic 65.0%
! GCCGTTGATTGGTGGGCGCT+AGG - chr4.3:38354300-38354319 MS.gene46927:CDS 65.0%
!! TGGTGGTGGGGTTGTGGACG+AGG + chr4.3:38353573-38353592 None:intergenic 65.0%
ACGCTGAACGTCGCGCCCGT+TGG - chr4.3:38353665-38353684 MS.gene46927:CDS 70.0%
CCGGAGGTTGTTCGCGGCGA+TGG - chr4.3:38354267-38354286 MS.gene46927:CDS 70.0%
CGCTGAACGTCGCGCCCGTT+GGG - chr4.3:38353666-38353685 MS.gene46927:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 38353481 38354740 38353481 ID=MS.gene46927
chr4.3 mRNA 38353481 38354740 38353481 ID=MS.gene46927.t1;Parent=MS.gene46927
chr4.3 exon 38353481 38354740 38353481 ID=MS.gene46927.t1.exon1;Parent=MS.gene46927.t1
chr4.3 CDS 38353481 38354740 38353481 ID=cds.MS.gene46927.t1;Parent=MS.gene46927.t1
Gene Sequence

>MS.gene46927

ATGGAACCAGCTCCACCACCATTGGAGCTAGACCTTGATAATCTTAAAGCATTCAAAATCCTAGGAAAAGGTGCCATGGGCACTGTCTTCCTCGTCCACAACCCCACCACCACAACAACCACCACCAACATCACCCTCTTTGCCCTAAAAGTCGTCGACAAAACCTCTATCCACGCCAAACTCGACGCTGAACGTCGCGCCCGTTGGGAAATCCAAGTCCTCTCCACCCTCTCCCATCCTTTCCTCCCTTCAATCCTTGGCACATATGAATCCCCACAGTTTCTTGCATGGGCCCTACCTTATTGTCCCGGTGGTGACCTCAATGTCCTCCGTTACCGTCAAAACGACCGTGTTTTCTCTCCGTCCGTTGTCCGGTTCTACCTAGCTGAAATCCTCTGCGCTCTCGACCACCTTCATTCAATGGGCATTGTTTACCGTGACCTAAAACCAGAAAATGTTCTCATACAACATTCCGGTCACGTCACGTTAACGGATTTCGACCTCTCACGTAAACTTAACCCTAAAACTTCTAAAACCGTTGTTGCAGCACCACCACCACCTTTACCAGATTCAAAGTTTCCAGAATCTTCGCGAAAACACCGTCGGAATTTCTCTCGTTGGATACCTCTTCTTCCAACTGAATCTTCTCATAATCATAATAAGATGCATGTTTTGAACTTGAAGAAGGCTAAGTCGGCACGAGTTAGTCCGGTGAGCCGACGAAAATTGAGTTTCTCAAACGGCGAACGGTCTAACTCGTTCGTCGGAACGGAGGAATATGTTTCACCGGAGGTTGTTCGCGGCGATGGACACGAGTTTGCCGTTGATTGGTGGGCGCTAGGGATACTTACATACGAAATGCTTTATGGTACAACACCGTTTAAGGGGAAGAATAGGAAAGAAACGTTTAAAAATGTGCTGATGAAGTCGCCGGAGTTCGTCGGAAAAAAGACGGAGTTGACGGATTTGATAGAGAAATTGTTGGAGAAGGATCCTAAGAAGAGATTAGGTTATTCACGTGGAGCTGTTGAGATTAAAGAGCATGCATTTTTCAAAGGTGTACGTTGGGATATATTGACGGAGGTGATTCGGCCGCCGTTTCTTCCGGCGAGATACGACGATGATGCCGGGGAATTTTCGTCGGAGAAGTTATCAAATGGGACTGGTGGTGTGGGTATTAAGGACTATTTTGAAAATTTGAAATCGCCGCCGTCGCCGTCTTGTAAGTTGAGAAAAAATGTTTCCTTAACGGAATTCTAA
Protein sequence

>MS.gene46927.t1

MEPAPPPLELDLDNLKAFKILGKGAMGTVFLVHNPTTTTTTTNITLFALKVVDKTSIHAKLDAERRARWEIQVLSTLSHPFLPSILGTYESPQFLAWALPYCPGGDLNVLRYRQNDRVFSPSVVRFYLAEILCALDHLHSMGIVYRDLKPENVLIQHSGHVTLTDFDLSRKLNPKTSKTVVAAPPPPLPDSKFPESSRKHRRNFSRWIPLLPTESSHNHNKMHVLNLKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFKNVLMKSPEFVGKKTELTDLIEKLLEKDPKKRLGYSRGAVEIKEHAFFKGVRWDILTEVIRPPFLPARYDDDAGEFSSEKLSNGTGGVGIKDYFENLKSPPSPSCKLRKNVSLTEF