Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47005.t1 | XP_003617203.2 | 98.2 | 341 | 6 | 0 | 1 | 341 | 1 | 341 | 1.80E-179 | 638.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47005.t1 | Q6PDI5 | 25.8 | 353 | 228 | 7 | 22 | 341 | 8 | 359 | 2.0e-22 | 108.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47005.t1 | G7KCU1 | 98.2 | 341 | 6 | 0 | 1 | 341 | 1 | 341 | 1.3e-179 | 638.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060349 | MS.gene47005 | 0.826737 | 2.30E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47005.t1 | MTR_5g089000 | 98.240 | 341 | 6 | 0 | 1 | 341 | 1 | 341 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47005.t1 | AT2G26780 | 68.862 | 334 | 103 | 1 | 17 | 349 | 15 | 348 | 7.30e-145 | 451 |
| MS.gene47005.t1 | AT2G26780 | 68.862 | 334 | 103 | 1 | 17 | 349 | 15 | 348 | 7.51e-145 | 451 |
Find 74 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAGAAGCTTGGAGAGTA+AGG | 0.282026 | 5.2:-75465608 | None:intergenic |
| GCTCAAGTCAATCGTGTTAC+AGG | 0.302814 | 5.2:+75468549 | MS.gene47005:CDS |
| TATAAAGGATAAACAAGTTC+AGG | 0.317773 | 5.2:-75469121 | None:intergenic |
| GTGAAGCTTCAGTCTGATAT+TGG | 0.328680 | 5.2:+75466709 | MS.gene47005:CDS |
| ATACCTTAACAATGATTCTA+AGG | 0.337710 | 5.2:-75467178 | None:intergenic |
| TGGACGTTGTATTCGGAATC+TGG | 0.343907 | 5.2:+75466751 | MS.gene47005:CDS |
| TGATTAGGTAAAGGAAGATT+TGG | 0.345530 | 5.2:+75467100 | MS.gene47005:intron |
| ATAATTTCCTGGTGTTGAAT+AGG | 0.353700 | 5.2:-75467155 | None:intergenic |
| ACAGAAGCAGCGACATATAA+AGG | 0.363564 | 5.2:-75469136 | None:intergenic |
| AACAACACTGAGAGCGAAAT+CGG | 0.391486 | 5.2:+75465513 | MS.gene47005:CDS |
| TGATTCTAAGGATAATTTCC+TGG | 0.392915 | 5.2:-75467166 | None:intergenic |
| GAATGCCACTCTGGTCAAAT+TGG | 0.409343 | 5.2:+75468276 | MS.gene47005:CDS |
| TATCCTTAGAATCATTGTTA+AGG | 0.414585 | 5.2:+75467175 | MS.gene47005:CDS |
| CCCGCTGGTACAACATTGTA+TGG | 0.418876 | 5.2:-75468371 | None:intergenic |
| GTAGGTACTGTTGGAGTTGA+AGG | 0.433691 | 5.2:+75470265 | MS.gene47005:intron |
| GAGTCTTGGCATTCAGATCA+TGG | 0.434047 | 5.2:+75471183 | MS.gene47005:CDS |
| TGAGTTGTGGACGTTGTATT+CGG | 0.440466 | 5.2:+75466744 | MS.gene47005:CDS |
| GATTGTGAGAGGAAGAAGCT+TGG | 0.441023 | 5.2:-75465617 | None:intergenic |
| ATGTCGCTGCTTCTGTAGAT+TGG | 0.451965 | 5.2:+75469143 | MS.gene47005:CDS |
| CTGGTGCTGCTCCGATGATA+AGG | 0.456084 | 5.2:+75466770 | MS.gene47005:CDS |
| GCCTTTAGAGCATGACTCCC+AGG | 0.461451 | 5.2:-75470313 | None:intergenic |
| ATATTATCACAGGAAATTGC+AGG | 0.464249 | 5.2:+75471148 | MS.gene47005:CDS |
| GAGATGTTCAACAATAGATC+GGG | 0.468946 | 5.2:-75467125 | None:intergenic |
| TTCAGAAATCGAAGAAATGC+TGG | 0.468972 | 5.2:+75465537 | MS.gene47005:CDS |
| TCCTGGGAGTCATGCTCTAA+AGG | 0.469129 | 5.2:+75470312 | MS.gene47005:CDS |
| ATCATCTAAGTTAGCACCAC+TGG | 0.476416 | 5.2:-75469340 | None:intergenic |
| AGTGAACAATTCTCAAGATA+AGG | 0.485556 | 5.2:+75468326 | MS.gene47005:CDS |
| AATCTGGTTGCCACTTCAGC+AGG | 0.492277 | 5.2:-75471223 | None:intergenic |
| TTTGAATGTTATTCAAGCCA+TGG | 0.492400 | 5.2:+75469090 | MS.gene47005:CDS |
| TGAGATGTTCAACAATAGAT+CGG | 0.494495 | 5.2:-75467126 | None:intergenic |
| AAAATGCACTGCAAAGTGGA+TGG | 0.507396 | 5.2:-75470385 | None:intergenic |
| CAGAGTCAAGAGTGAGTCCT+GGG | 0.508251 | 5.2:+75470296 | MS.gene47005:CDS |
| GCTTGGAGAGTAAGGGTTCG+AGG | 0.514854 | 5.2:-75465600 | None:intergenic |
| TTTGAATCCACCTGCTGAAG+TGG | 0.518682 | 5.2:+75471213 | MS.gene47005:CDS |
| TCCTCGCCTCTCTTTACCAC+AGG | 0.519911 | 5.2:-75469300 | None:intergenic |
| TGAGTACCGAGTCTAGAATC+TGG | 0.522708 | 5.2:-75471239 | None:intergenic |
| TAATGAACTTCTATTAAGAA+AGG | 0.523159 | 5.2:+75468590 | MS.gene47005:CDS |
| ATGGTGAATGTAGGTACTGT+TGG | 0.531641 | 5.2:+75470256 | MS.gene47005:intron |
| TTGCATTGTCTATATAGAGA+TGG | 0.533042 | 5.2:+75466798 | MS.gene47005:CDS |
| ATAAAGGATAAACAAGTTCA+GGG | 0.533327 | 5.2:-75469120 | None:intergenic |
| CACAATGCTCATATTATCAC+AGG | 0.539525 | 5.2:+75471138 | MS.gene47005:CDS |
| TCAGAGTCAAGAGTGAGTCC+TGG | 0.539724 | 5.2:+75470295 | MS.gene47005:CDS |
| GGAGAGTAAGGGTTCGAGGT+TGG | 0.542538 | 5.2:-75465596 | None:intergenic |
| GAGAGAGAAGAGATTGTGAG+AGG | 0.543380 | 5.2:-75465628 | None:intergenic |
| GGATGTGAGGTCTTGAGTCT+TGG | 0.548520 | 5.2:+75471169 | MS.gene47005:CDS |
| TGTAGTGGTGGATTCCCTCA+TGG | 0.549464 | 5.2:+75468516 | MS.gene47005:intron |
| CTGGTTGCCACTTCAGCAGG+TGG | 0.552065 | 5.2:-75471220 | None:intergenic |
| AGTTGATGTCTATATTCTGC+CGG | 0.554344 | 5.2:+75470338 | MS.gene47005:CDS |
| AAGTTCAGGGTTAAGCTCCA+TGG | 0.559980 | 5.2:-75469107 | None:intergenic |
| TATTTGCTGCTGCAATAGAC+CGG | 0.560263 | 5.2:-75470357 | None:intergenic |
| GTAATTGGTGAATGCCACTC+TGG | 0.563778 | 5.2:+75468267 | MS.gene47005:CDS |
| GTTTGCCTTTGACTGAGTTG+TGG | 0.563801 | 5.2:+75466731 | MS.gene47005:CDS |
| AAATCGAAGAAATGCTGGAT+CGG | 0.564876 | 5.2:+75465542 | MS.gene47005:CDS |
| CCATACAATGTTGTACCAGC+GGG | 0.566669 | 5.2:+75468371 | MS.gene47005:CDS |
| AAATGCACTGCAAAGTGGAT+GGG | 0.578543 | 5.2:-75470384 | None:intergenic |
| TACCTTGTTACGAACTGCGA+TGG | 0.579606 | 5.2:-75465659 | None:intergenic |
| AACGTCCACAACTCAGTCAA+AGG | 0.584348 | 5.2:-75466736 | None:intergenic |
| CAGACCTTTGAGAGACCCGC+TGG | 0.592104 | 5.2:-75468386 | None:intergenic |
| GATTGACTTGAGCAACAGAA+AGG | 0.596462 | 5.2:-75468539 | None:intergenic |
| CTCAAGTCAATCGTGTTACA+GGG | 0.600957 | 5.2:+75468550 | MS.gene47005:CDS |
| ATCCATCGCAGTTCGTAACA+AGG | 0.601526 | 5.2:+75465657 | MS.gene47005:CDS |
| GGAAGAAGCTTGGAGAGTAA+GGG | 0.602103 | 5.2:-75465607 | None:intergenic |
| TGTACCAGCGGGTCTCTCAA+AGG | 0.604369 | 5.2:+75468382 | MS.gene47005:CDS |
| GAGCAACAGAAAGGCCATGA+GGG | 0.612352 | 5.2:-75468530 | None:intergenic |
| GAAGAGCCTGTGGTAAAGAG+AGG | 0.613686 | 5.2:+75469294 | MS.gene47005:CDS |
| TCCATACAATGTTGTACCAG+CGG | 0.625246 | 5.2:+75468370 | MS.gene47005:CDS |
| ACAGGAAATTGCAGGATGTG+AGG | 0.626143 | 5.2:+75471156 | MS.gene47005:CDS |
| AAAACTTCCTATTCAACACC+AGG | 0.636329 | 5.2:+75467148 | MS.gene47005:CDS |
| TAACTCAAGTGAAGAGCCTG+TGG | 0.636627 | 5.2:+75469284 | MS.gene47005:intron |
| CTGTGATAATATGAGCATTG+TGG | 0.661887 | 5.2:-75471137 | None:intergenic |
| GCCTGTGGTAAAGAGAGGCG+AGG | 0.668340 | 5.2:+75469299 | MS.gene47005:CDS |
| CATCACCAATTTGACCAGAG+TGG | 0.679801 | 5.2:-75468281 | None:intergenic |
| TGAGCAACAGAAAGGCCATG+AGG | 0.682726 | 5.2:-75468531 | None:intergenic |
| TCTTGGCATTCAGATCATGG+AGG | 0.773379 | 5.2:+75471186 | MS.gene47005:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTGTTTTTAAAATTG+TGG | + | chr5.2:75466585-75466604 | MS.gene47005:intron | 10.0% |
| !!! | ATTTTAAAAACAAAAATTAC+AGG | - | chr5.2:75466583-75466602 | None:intergenic | 10.0% |
| !! | AAAATTAATTGCTTAGTTAT+TGG | + | chr5.2:75470507-75470526 | MS.gene47005:intron | 15.0% |
| !! | AAAATTTAGTTATGTAACAA+TGG | - | chr5.2:75467220-75467239 | None:intergenic | 15.0% |
| !! | GAAAAAAATAATATGTAGTT+AGG | - | chr5.2:75469625-75469644 | None:intergenic | 15.0% |
| !! | TATAATCATGAAAAAATTGA+AGG | - | chr5.2:75469488-75469507 | None:intergenic | 15.0% |
| !! | TTAGTAAGAAAGAATAAAAA+CGG | - | chr5.2:75469196-75469215 | None:intergenic | 15.0% |
| !!! | ATTGCGATTTTTTTTTTTTT+TGG | + | chr5.2:75470051-75470070 | MS.gene47005:intron | 15.0% |
| !!! | TTCTCTTGATTTTAAATTTT+TGG | - | chr5.2:75470021-75470040 | None:intergenic | 15.0% |
| !! | AAACTACCATTTGATTAAAT+GGG | - | chr5.2:75468487-75468506 | None:intergenic | 20.0% |
| !! | AAGTAGTAATAGAATTAGTT+AGG | - | chr5.2:75467774-75467793 | None:intergenic | 20.0% |
| !! | CAATTACATAATGAAATTTC+CGG | - | chr5.2:75465711-75465730 | None:intergenic | 20.0% |
| !! | GAATAAAAATATATTAGGAG+TGG | - | chr5.2:75469995-75470014 | None:intergenic | 20.0% |
| !! | GGACTGAATAAAAATATATT+AGG | - | chr5.2:75470000-75470019 | None:intergenic | 20.0% |
| !! | TAATGAACTTCTATTAAGAA+AGG | + | chr5.2:75468590-75468609 | MS.gene47005:CDS | 20.0% |
| !!! | AACTTTTGTTGAGATATATA+AGG | + | chr5.2:75469412-75469431 | MS.gene47005:intron | 20.0% |
| !!! | AATCTTCAATACTTGTTTTT+GGG | - | chr5.2:75467567-75467586 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTTAAGAGTTTGA+AGG | - | chr5.2:75471066-75471085 | None:intergenic | 20.0% |
| !!! | TAATCTTCAATACTTGTTTT+TGG | - | chr5.2:75467568-75467587 | None:intergenic | 20.0% |
| !!! | TAGTATTTTTACATGATTGA+TGG | + | chr5.2:75470237-75470256 | MS.gene47005:intron | 20.0% |
| !!! | TGGATTTTTATTATACTGAA+TGG | + | chr5.2:75468413-75468432 | MS.gene47005:intron | 20.0% |
| !!! | TTGTTATATTTACTGTTTTG+TGG | + | chr5.2:75466874-75466893 | MS.gene47005:intron | 20.0% |
| ! | AAAGAGAATGAATCTATCAT+TGG | + | chr5.2:75467605-75467624 | MS.gene47005:intron | 25.0% |
| ! | AATTGTGAAGGAAGATATTT+AGG | - | chr5.2:75468719-75468738 | None:intergenic | 25.0% |
| ! | AATTTCAACAAAGGGAAAAA+GGG | + | chr5.2:75469760-75469779 | MS.gene47005:intron | 25.0% |
| ! | ACTATACTTGGTAGAAAATT+AGG | + | chr5.2:75465793-75465812 | MS.gene47005:intron | 25.0% |
| ! | ACTATAGCTTATAGCATATT+AGG | + | chr5.2:75466097-75466116 | MS.gene47005:intron | 25.0% |
| ! | ACTATAGCTTATTGCATATT+AGG | + | chr5.2:75466179-75466198 | MS.gene47005:intron | 25.0% |
| ! | ACTCTATACACAATAGATTA+AGG | - | chr5.2:75470603-75470622 | None:intergenic | 25.0% |
| ! | ATAAAGGATAAACAAGTTCA+GGG | - | chr5.2:75469123-75469142 | None:intergenic | 25.0% |
| ! | ATAATTCCTGTTTAAGCATT+TGG | + | chr5.2:75466927-75466946 | MS.gene47005:intron | 25.0% |
| ! | ATACCTTAACAATGATTCTA+AGG | - | chr5.2:75467181-75467200 | None:intergenic | 25.0% |
| ! | ATGCAAAAATTCCTTATCAT+CGG | - | chr5.2:75466784-75466803 | None:intergenic | 25.0% |
| ! | ATGCTTAGTTATTGATCTTT+GGG | + | chr5.2:75468197-75468216 | MS.gene47005:intron | 25.0% |
| ! | ATTGCACTTAGTGTATAAAA+TGG | - | chr5.2:75469743-75469762 | None:intergenic | 25.0% |
| ! | ATTTCAAAATAACCAAGAGA+AGG | + | chr5.2:75469962-75469981 | MS.gene47005:intron | 25.0% |
| ! | CCTTAAAATGATAAACTGAT+GGG | + | chr5.2:75470980-75470999 | MS.gene47005:intron | 25.0% |
| ! | CTATAACAAAGCAAAATGTT+TGG | - | chr5.2:75466467-75466486 | None:intergenic | 25.0% |
| ! | GAAACTACCATTTGATTAAA+TGG | - | chr5.2:75468488-75468507 | None:intergenic | 25.0% |
| ! | GATAAGAGAAAAAATTGTGA+AGG | - | chr5.2:75468731-75468750 | None:intergenic | 25.0% |
| ! | GATTCATAATAGGACATTAT+AGG | + | chr5.2:75468852-75468871 | MS.gene47005:intron | 25.0% |
| ! | TAACTTAGCTATATTAAGCA+AGG | + | chr5.2:75470128-75470147 | MS.gene47005:intron | 25.0% |
| ! | TAAGAAAGGTAATCATGTAA+TGG | + | chr5.2:75468604-75468623 | MS.gene47005:intron | 25.0% |
| ! | TAGTAATAGAATTAGTTAGG+TGG | - | chr5.2:75467771-75467790 | None:intergenic | 25.0% |
| ! | TATAAAGGATAAACAAGTTC+AGG | - | chr5.2:75469124-75469143 | None:intergenic | 25.0% |
| ! | TATCCTTAGAATCATTGTTA+AGG | + | chr5.2:75467175-75467194 | MS.gene47005:CDS | 25.0% |
| ! | TCAGCAATTACAATATGAAA+AGG | - | chr5.2:75466402-75466421 | None:intergenic | 25.0% |
| ! | TGTGTTCTTATATTTCCTAA+TGG | - | chr5.2:75469820-75469839 | None:intergenic | 25.0% |
| ! | TTCAGAACTTGATTCATAAT+AGG | + | chr5.2:75468842-75468861 | MS.gene47005:intron | 25.0% |
| ! | TTCATTCCCATTTAATCAAA+TGG | + | chr5.2:75468478-75468497 | MS.gene47005:intron | 25.0% |
| ! | TTGCACTTAGTGTATAAAAT+GGG | - | chr5.2:75469742-75469761 | None:intergenic | 25.0% |
| ! | TTTAAGCATTTGGCTAATAA+AGG | + | chr5.2:75466937-75466956 | MS.gene47005:intron | 25.0% |
| ! | TTTACCTAATCAAATTGCAA+GGG | - | chr5.2:75467092-75467111 | None:intergenic | 25.0% |
| ! | TTTGAACTCTTACTATATCT+AGG | + | chr5.2:75470191-75470210 | MS.gene47005:intron | 25.0% |
| !! | AAAGAAGTATGAACTGAAAA+AGG | + | chr5.2:75467630-75467649 | MS.gene47005:intron | 25.0% |
| !! | ACTATAGTTTGTAGCATATT+AGG | + | chr5.2:75466015-75466034 | MS.gene47005:intron | 25.0% |
| !! | CATCAGTTTATCATTTTAAG+GGG | - | chr5.2:75470981-75471000 | None:intergenic | 25.0% |
| !! | CCATCAGTTTATCATTTTAA+GGG | - | chr5.2:75470982-75471001 | None:intergenic | 25.0% |
| !!! | AAGGTAATTGCTTTTGTTTA+TGG | + | chr5.2:75469933-75469952 | MS.gene47005:intron | 25.0% |
| !!! | AGACTGTTTTTGCTATTTAA+TGG | + | chr5.2:75469378-75469397 | MS.gene47005:CDS | 25.0% |
| !!! | CAATTTTTTCTCTTATCAGA+AGG | + | chr5.2:75468734-75468753 | MS.gene47005:intron | 25.0% |
| !!! | CATAGTAGCTTTTTTTGTAA+AGG | - | chr5.2:75469021-75469040 | None:intergenic | 25.0% |
| !!! | CATTTGTTATGTCACAAATT+TGG | + | chr5.2:75468451-75468470 | MS.gene47005:intron | 25.0% |
| !!! | TGTTATCAAGTTGATTAGTA+TGG | + | chr5.2:75465729-75465748 | MS.gene47005:intron | 25.0% |
| !!! | TTTTGTTTGATAAGGAGAAA+AGG | + | chr5.2:75469903-75469922 | MS.gene47005:intron | 25.0% |
| !!! | TTTTTTTGTAAAGGCACAAT+AGG | - | chr5.2:75469012-75469031 | None:intergenic | 25.0% |
| AAATGAACAGAATATCCCTA+TGG | - | chr5.2:75468790-75468809 | None:intergenic | 30.0% | |
| AACCTTACATGGTAAGATAA+TGG | - | chr5.2:75468635-75468654 | None:intergenic | 30.0% | |
| AATACATTCTGTTTAGCACT+TGG | - | chr5.2:75467715-75467734 | None:intergenic | 30.0% | |
| AATGATAAAATCATCGACCA+AGG | - | chr5.2:75467347-75467366 | None:intergenic | 30.0% | |
| AATTAATGAGACTGCTTTCA+TGG | - | chr5.2:75469873-75469892 | None:intergenic | 30.0% | |
| AATTGCTTAGTTATTGGTCA+AGG | + | chr5.2:75470513-75470532 | MS.gene47005:intron | 30.0% | |
| ACTAAGTGCAATTTCAACAA+AGG | + | chr5.2:75469751-75469770 | MS.gene47005:intron | 30.0% | |
| ACTGAAATCTTACTGTAACT+AGG | - | chr5.2:75466057-75466076 | None:intergenic | 30.0% | |
| AGTGAACAATTCTCAAGATA+AGG | + | chr5.2:75468326-75468345 | MS.gene47005:CDS | 30.0% | |
| ATACATTCTGTTTAGCACTT+GGG | - | chr5.2:75467714-75467733 | None:intergenic | 30.0% | |
| ATATTATCACAGGAAATTGC+AGG | + | chr5.2:75471148-75471167 | MS.gene47005:CDS | 30.0% | |
| ATGATAAAATCATCGACCAA+GGG | - | chr5.2:75467346-75467365 | None:intergenic | 30.0% | |
| ATTCTTGCAAACATGTATCA+GGG | - | chr5.2:75468176-75468195 | None:intergenic | 30.0% | |
| CAATTTCAACAAAGGGAAAA+AGG | + | chr5.2:75469759-75469778 | MS.gene47005:intron | 30.0% | |
| CACAATAGATTAAGGCAATA+AGG | - | chr5.2:75470595-75470614 | None:intergenic | 30.0% | |
| CATGCTTAGTTATTGATCTT+TGG | + | chr5.2:75468196-75468215 | MS.gene47005:intron | 30.0% | |
| CCCTTAAAATGATAAACTGA+TGG | + | chr5.2:75470979-75470998 | MS.gene47005:intron | 30.0% | |
| CTAAGTGCAATTTCAACAAA+GGG | + | chr5.2:75469752-75469771 | MS.gene47005:intron | 30.0% | |
| CTACAGCTTATAGAATACTT+AGG | + | chr5.2:75466437-75466456 | MS.gene47005:intron | 30.0% | |
| CTTGCAATTTGATTAGGTAA+AGG | + | chr5.2:75467091-75467110 | MS.gene47005:intron | 30.0% | |
| CTTTACCTAATCAAATTGCA+AGG | - | chr5.2:75467093-75467112 | None:intergenic | 30.0% | |
| GATTTCAATTGCTGAATGAA+CGG | + | chr5.2:75466150-75466169 | MS.gene47005:intron | 30.0% | |
| GCAATTACAATATGAAAAGG+AGG | - | chr5.2:75466399-75466418 | None:intergenic | 30.0% | |
| GCATGTATCTGTTATGTATA+TGG | - | chr5.2:75467505-75467524 | None:intergenic | 30.0% | |
| GGAAATATAAGAACACACTT+AGG | + | chr5.2:75469823-75469842 | MS.gene47005:intron | 30.0% | |
| GGTGAAAGTTTAATGGTTTA+GGG | + | chr5.2:75466634-75466653 | MS.gene47005:intron | 30.0% | |
| GTTCAAAATGTCAATCGAAA+AGG | - | chr5.2:75470178-75470197 | None:intergenic | 30.0% | |
| TACCATTATCTTACCATGTA+AGG | + | chr5.2:75468630-75468649 | MS.gene47005:intron | 30.0% | |
| TATGTATAGAGATTCTACAG+CGG | + | chr5.2:75470783-75470802 | MS.gene47005:intron | 30.0% | |
| TATTAGCCAAATGCTTAAAC+AGG | - | chr5.2:75466936-75466955 | None:intergenic | 30.0% | |
| TCAGTATATTCACATTTGGA+TGG | + | chr5.2:75468974-75468993 | MS.gene47005:intron | 30.0% | |
| TCGCTATTGAATACTTATCA+TGG | + | chr5.2:75467044-75467063 | MS.gene47005:intron | 30.0% | |
| TCTCCTTATCAAACAAAAAC+AGG | - | chr5.2:75469901-75469920 | None:intergenic | 30.0% | |
| TCTTGTAATTGCTGAATTGA+CGG | + | chr5.2:75465764-75465783 | MS.gene47005:intron | 30.0% | |
| TGAGATGTTCAACAATAGAT+CGG | - | chr5.2:75467129-75467148 | None:intergenic | 30.0% | |
| TGATTAGGTAAAGGAAGATT+TGG | + | chr5.2:75467100-75467119 | MS.gene47005:intron | 30.0% | |
| TGCACTTAGTGTATAAAATG+GGG | - | chr5.2:75469741-75469760 | None:intergenic | 30.0% | |
| TGGTGAAAGTTTAATGGTTT+AGG | + | chr5.2:75466633-75466652 | MS.gene47005:intron | 30.0% | |
| TGTTGTTGATGTTATTACCA+TGG | + | chr5.2:75468666-75468685 | MS.gene47005:intron | 30.0% | |
| TTGATGTTATTACCATGGTT+AGG | + | chr5.2:75468671-75468690 | MS.gene47005:intron | 30.0% | |
| TTGCATTGTCTATATAGAGA+TGG | + | chr5.2:75466798-75466817 | MS.gene47005:CDS | 30.0% | |
| TTTGAATGTTATTCAAGCCA+TGG | + | chr5.2:75469090-75469109 | MS.gene47005:CDS | 30.0% | |
| ! | AGTTTGACTGTTTTGCAAAT+TGG | + | chr5.2:75467276-75467295 | MS.gene47005:intron | 30.0% |
| ! | ATAATTTCCTGGTGTTGAAT+AGG | - | chr5.2:75467158-75467177 | None:intergenic | 30.0% |
| ! | CAATCGATTCATTCATCAAT+TGG | - | chr5.2:75465993-75466012 | None:intergenic | 30.0% |
| ! | CCCATCAGTTTATCATTTTA+AGG | - | chr5.2:75470983-75471002 | None:intergenic | 30.0% |
| ! | GTGTGCAAAATTTTACTCAA+AGG | - | chr5.2:75469661-75469680 | None:intergenic | 30.0% |
| ! | TACTTTAGAAGCATGTTGAT+AGG | - | chr5.2:75467914-75467933 | None:intergenic | 30.0% |
| ! | TATGGTCATGCTTTTATGAT+AGG | - | chr5.2:75467487-75467506 | None:intergenic | 30.0% |
| ! | TGATTCTAAGGATAATTTCC+TGG | - | chr5.2:75467169-75467188 | None:intergenic | 30.0% |
| ! | TTTTCAACGTGTTAATGCAA+AGG | + | chr5.2:75466822-75466841 | MS.gene47005:CDS | 30.0% |
| !! | ATGAATTGCTGCTTGTTTTT+AGG | + | chr5.2:75468245-75468264 | MS.gene47005:intron | 30.0% |
| !! | GATTTCAGTTGATGAATGAA+CGG | + | chr5.2:75466068-75466087 | MS.gene47005:intron | 30.0% |
| !! | GCATTAGTTGCACTTTATTT+TGG | + | chr5.2:75468039-75468058 | MS.gene47005:intron | 30.0% |
| !! | GTTTTGTTGTAAACTAAGCA+GGG | + | chr5.2:75467392-75467411 | MS.gene47005:intron | 30.0% |
| !! | TAGTTTCTGTTTTGTTGTAG+TGG | + | chr5.2:75468501-75468520 | MS.gene47005:intron | 30.0% |
| !! | TTTGTTTTCGCATGTAGAAT+GGG | + | chr5.2:75471100-75471119 | MS.gene47005:intron | 30.0% |
| !!! | AAATTGTGGTTTTCAAGTGA+TGG | + | chr5.2:75466599-75466618 | MS.gene47005:intron | 30.0% |
| !!! | AGTCCTGTTTTTGTTTGATA+AGG | + | chr5.2:75469895-75469914 | MS.gene47005:intron | 30.0% |
| !!! | TTTTGTTTTCGCATGTAGAA+TGG | + | chr5.2:75471099-75471118 | MS.gene47005:intron | 30.0% |
| AAAACTTCCTATTCAACACC+AGG | + | chr5.2:75467148-75467167 | MS.gene47005:CDS | 35.0% | |
| AAATCGAAGAAATGCTGGAT+CGG | + | chr5.2:75465542-75465561 | MS.gene47005:CDS | 35.0% | |
| AATACTTATCATGGAGCTTG+TGG | + | chr5.2:75467053-75467072 | MS.gene47005:intron | 35.0% | |
| AATGCCCTTGCAATTTGATT+AGG | + | chr5.2:75467085-75467104 | MS.gene47005:intron | 35.0% | |
| AATTATGACAAGCAGCATTC+TGG | - | chr5.2:75468119-75468138 | None:intergenic | 35.0% | |
| ACAAGCAGCAATTCATTAGA+AGG | - | chr5.2:75468241-75468260 | None:intergenic | 35.0% | |
| AGAAAAGGAGGAATGTTTCA+AGG | + | chr5.2:75468072-75468091 | MS.gene47005:intron | 35.0% | |
| AGAGCAAGGGAATAGATTAA+AGG | - | chr5.2:75467740-75467759 | None:intergenic | 35.0% | |
| AGCAACTGAAACTAACAAAC+AGG | + | chr5.2:75470849-75470868 | MS.gene47005:intron | 35.0% | |
| ATACATAGATTGCAACACTC+AGG | - | chr5.2:75470770-75470789 | None:intergenic | 35.0% | |
| ATAGCTAAGTTAGCTAGCAA+AGG | - | chr5.2:75470120-75470139 | None:intergenic | 35.0% | |
| CAACTGAAACTAACAAACAG+GGG | + | chr5.2:75470851-75470870 | MS.gene47005:intron | 35.0% | |
| CACAATGCTCATATTATCAC+AGG | + | chr5.2:75471138-75471157 | MS.gene47005:CDS | 35.0% | |
| CCAAATGTGAATATACTGAC+AGG | - | chr5.2:75468973-75468992 | None:intergenic | 35.0% | |
| CCTGTCAGTATATTCACATT+TGG | + | chr5.2:75468970-75468989 | MS.gene47005:intron | 35.0% | |
| CTTTCTGAGTTCTATCTTTG+TGG | + | chr5.2:75469221-75469240 | MS.gene47005:intron | 35.0% | |
| GAAAAGGAGGAATGTTTCAA+GGG | + | chr5.2:75468073-75468092 | MS.gene47005:intron | 35.0% | |
| GAGATGTTCAACAATAGATC+GGG | - | chr5.2:75467128-75467147 | None:intergenic | 35.0% | |
| GAGCAAGGGAATAGATTAAA+GGG | - | chr5.2:75467739-75467758 | None:intergenic | 35.0% | |
| GAGTCTGCTTAGTTTAAATC+AGG | + | chr5.2:75469594-75469613 | MS.gene47005:intron | 35.0% | |
| GATTCTTGCAAACATGTATC+AGG | - | chr5.2:75468177-75468196 | None:intergenic | 35.0% | |
| GATTTCAGTTGCTGAATGAA+TGG | + | chr5.2:75466232-75466251 | MS.gene47005:intron | 35.0% | |
| GCAACTGAAACTAACAAACA+GGG | + | chr5.2:75470850-75470869 | MS.gene47005:intron | 35.0% | |
| GCACTTAGTGTATAAAATGG+GGG | - | chr5.2:75469740-75469759 | None:intergenic | 35.0% | |
| GGGAATTGTGTGTTTATGAT+AGG | + | chr5.2:75466654-75466673 | MS.gene47005:intron | 35.0% | |
| GTAACAATGGAGATTCAGAA+AGG | - | chr5.2:75467207-75467226 | None:intergenic | 35.0% | |
| GTATGAACTGAAAAAGGAGA+CGG | + | chr5.2:75467636-75467655 | MS.gene47005:intron | 35.0% | |
| GTTTGATAAGGAGAAAAGGT+GGG | + | chr5.2:75469907-75469926 | MS.gene47005:intron | 35.0% | |
| TACACTATCTGAACCTTACA+TGG | - | chr5.2:75468646-75468665 | None:intergenic | 35.0% | |
| TCTGTTAAGCATCAAAGAGA+AGG | - | chr5.2:75467428-75467447 | None:intergenic | 35.0% | |
| TGTTTGATAAGGAGAAAAGG+TGG | + | chr5.2:75469906-75469925 | MS.gene47005:intron | 35.0% | |
| TTCAGAAATCGAAGAAATGC+TGG | + | chr5.2:75465537-75465556 | MS.gene47005:CDS | 35.0% | |
| TTGTTTACGTGCTTGTTCTT+AGG | + | chr5.2:75466527-75466546 | MS.gene47005:intron | 35.0% | |
| TTTACTGCCTATCTTCTTCT+AGG | + | chr5.2:75470076-75470095 | MS.gene47005:intron | 35.0% | |
| ! | AGTTGATGTCTATATTCTGC+CGG | + | chr5.2:75470338-75470357 | MS.gene47005:CDS | 35.0% |
| ! | CAACAAAATCCTTTTCCACT+AGG | - | chr5.2:75468904-75468923 | None:intergenic | 35.0% |
| ! | CTGTGATAATATGAGCATTG+TGG | - | chr5.2:75471140-75471159 | None:intergenic | 35.0% |
| ! | GTCCTTCTGTTTAAAGTTTG+CGG | + | chr5.2:75470471-75470490 | MS.gene47005:intron | 35.0% |
| ! | GTGTTTATGAGCTTGTTCAT+CGG | + | chr5.2:75465883-75465902 | MS.gene47005:intron | 35.0% |
| ! | TGTAGAATGGGTTTGTATCA+AGG | + | chr5.2:75471112-75471131 | MS.gene47005:intron | 35.0% |
| ! | TGTTTTGCAAATTGGACTTG+AGG | + | chr5.2:75467284-75467303 | MS.gene47005:intron | 35.0% |
| !! | ACAAAGTGTGGTATTGACTT+TGG | + | chr5.2:75467307-75467326 | MS.gene47005:intron | 35.0% |
| !! | ACACGTTCTGTATTTTGAAC+TGG | + | chr5.2:75469677-75469696 | MS.gene47005:intron | 35.0% |
| !! | ACATGATTGATGGTGAATGT+AGG | + | chr5.2:75470247-75470266 | MS.gene47005:intron | 35.0% |
| !! | CACGTTCTGTATTTTGAACT+GGG | + | chr5.2:75469678-75469697 | MS.gene47005:intron | 35.0% |
| !! | CATGCTTCTAAAGTAAATGC+CGG | + | chr5.2:75467919-75467938 | MS.gene47005:intron | 35.0% |
| !! | CGTTTTGTTGTAAACTAAGC+AGG | + | chr5.2:75467391-75467410 | MS.gene47005:intron | 35.0% |
| !! | GTGGTTTGGTGAAAGTTTAA+TGG | + | chr5.2:75466627-75466646 | MS.gene47005:intron | 35.0% |
| !! | GTTTTGACCTAGAAGAAGAT+AGG | - | chr5.2:75470086-75470105 | None:intergenic | 35.0% |
| !! | TAGCTTTGTCTACGTAGAAA+GGG | - | chr5.2:75467681-75467700 | None:intergenic | 35.0% |
| !! | TGACGGATTGAAACTATACT+TGG | + | chr5.2:75465781-75465800 | MS.gene47005:intron | 35.0% |
| !! | TTAGCTTTGTCTACGTAGAA+AGG | - | chr5.2:75467682-75467701 | None:intergenic | 35.0% |
| !! | TTTCTGTTTTGTTGTAGTGG+TGG | + | chr5.2:75468504-75468523 | MS.gene47005:intron | 35.0% |
| !!! | GCTGCTTGTTTTTAGGTAAT+TGG | + | chr5.2:75468252-75468271 | MS.gene47005:intron | 35.0% |
| !!! | TAGTTGCACTTTATTTTGGC+TGG | + | chr5.2:75468043-75468062 | MS.gene47005:intron | 35.0% |
| !!! | TGCATTTTTGGTTGCGTTTA+TGG | + | chr5.2:75470400-75470419 | MS.gene47005:CDS | 35.0% |
| !!! | TTGCTTTTTCTGTGGGAATT+TGG | + | chr5.2:75471036-75471055 | MS.gene47005:intron | 35.0% |
| !!! | TTTTCAAGTGATGGAGAAAG+TGG | + | chr5.2:75466608-75466627 | MS.gene47005:intron | 35.0% |
| AAAATGCACTGCAAAGTGGA+TGG | - | chr5.2:75470388-75470407 | None:intergenic | 40.0% | |
| AAATGCACTGCAAAGTGGAT+GGG | - | chr5.2:75470387-75470406 | None:intergenic | 40.0% | |
| AACAACACTGAGAGCGAAAT+CGG | + | chr5.2:75465513-75465532 | MS.gene47005:CDS | 40.0% | |
| AAGACTCTACACTAGGTTCA+GGG | - | chr5.2:75468148-75468167 | None:intergenic | 40.0% | |
| AAGCAGCATTCTGGTGTAAA+TGG | - | chr5.2:75468110-75468129 | None:intergenic | 40.0% | |
| AAGGAGAAAAGGTGGGTATA+AGG | + | chr5.2:75469914-75469933 | MS.gene47005:intron | 40.0% | |
| ACAGAAGCAGCGACATATAA+AGG | - | chr5.2:75469139-75469158 | None:intergenic | 40.0% | |
| ACCAAAAATGCACTGCAAAG+TGG | - | chr5.2:75470392-75470411 | None:intergenic | 40.0% | |
| AGCAGCATTCTGGTGTAAAT+GGG | - | chr5.2:75468109-75468128 | None:intergenic | 40.0% | |
| AGGTGGTTATAGTAAGAGCA+AGG | - | chr5.2:75467754-75467773 | None:intergenic | 40.0% | |
| AGTTCGGAGAACTTGAGTAT+TGG | + | chr5.2:75468017-75468036 | MS.gene47005:intron | 40.0% | |
| ATAAAATCATCGACCAAGGG+AGG | - | chr5.2:75467343-75467362 | None:intergenic | 40.0% | |
| ATCATCTAAGTTAGCACCAC+TGG | - | chr5.2:75469343-75469362 | None:intergenic | 40.0% | |
| ATTACCATGGTTAGGAGAAC+TGG | + | chr5.2:75468679-75468698 | MS.gene47005:intron | 40.0% | |
| CTCAAGTCAATCGTGTTACA+GGG | + | chr5.2:75468550-75468569 | MS.gene47005:CDS | 40.0% | |
| GGCAAATAAGACTCTACACT+AGG | - | chr5.2:75468155-75468174 | None:intergenic | 40.0% | |
| GGCAGCAAGTAATAAAGCAT+TGG | - | chr5.2:75469719-75469738 | None:intergenic | 40.0% | |
| GGTAAATGCTAAAGACCAAG+TGG | - | chr5.2:75469852-75469871 | None:intergenic | 40.0% | |
| GGTGGTTATAGTAAGAGCAA+GGG | - | chr5.2:75467753-75467772 | None:intergenic | 40.0% | |
| GGTTAGTGAGACAACACAAA+GGG | - | chr5.2:75470901-75470920 | None:intergenic | 40.0% | |
| GTCCGCAAACTTTAAACAGA+AGG | - | chr5.2:75470476-75470495 | None:intergenic | 40.0% | |
| GTGAAGCTTCAGTCTGATAT+TGG | + | chr5.2:75466709-75466728 | MS.gene47005:CDS | 40.0% | |
| GTGCAGAATCTACTAACACA+AGG | - | chr5.2:75471015-75471034 | None:intergenic | 40.0% | |
| GTGTTGGGAGATAACAAACT+GGG | - | chr5.2:75467978-75467997 | None:intergenic | 40.0% | |
| GTTAGTGAGACAACACAAAG+GGG | - | chr5.2:75470900-75470919 | None:intergenic | 40.0% | |
| TAAGACTCTACACTAGGTTC+AGG | - | chr5.2:75468149-75468168 | None:intergenic | 40.0% | |
| TCCATACAATGTTGTACCAG+CGG | + | chr5.2:75468370-75468389 | MS.gene47005:CDS | 40.0% | |
| TCCGGCAACGAATTGAAATT+CGG | - | chr5.2:75465693-75465712 | None:intergenic | 40.0% | |
| TGAGTTGTGGACGTTGTATT+CGG | + | chr5.2:75466744-75466763 | MS.gene47005:CDS | 40.0% | |
| TGTGTTGGGAGATAACAAAC+TGG | - | chr5.2:75467979-75467998 | None:intergenic | 40.0% | |
| TTAGTTTCAGTTGCTGACAG+TGG | - | chr5.2:75470844-75470863 | None:intergenic | 40.0% | |
| ! | AAGTGATGGAGAAAGTGGTT+TGG | + | chr5.2:75466613-75466632 | MS.gene47005:intron | 40.0% |
| ! | AGCTTTGTCTACGTAGAAAG+GGG | - | chr5.2:75467680-75467699 | None:intergenic | 40.0% |
| ! | ATGGTGAATGTAGGTACTGT+TGG | + | chr5.2:75470256-75470275 | MS.gene47005:intron | 40.0% |
| ! | GCTAGCAAAGGTGTATATAC+AGG | - | chr5.2:75470108-75470127 | None:intergenic | 40.0% |
| ! | TATTTGCTGCTGCAATAGAC+CGG | - | chr5.2:75470360-75470379 | None:intergenic | 40.0% |
| ! | TCCACTTTGCAGTGCATTTT+TGG | + | chr5.2:75470388-75470407 | MS.gene47005:CDS | 40.0% |
| !! | CGAGGAGCTTTTAAAGAAGA+AGG | + | chr5.2:75469317-75469336 | MS.gene47005:CDS | 40.0% |
| !! | CTTTTAAAGAAGAAGGCCAG+TGG | + | chr5.2:75469324-75469343 | MS.gene47005:CDS | 40.0% |
| !! | GATAAACTGATGGGTTCACA+AGG | + | chr5.2:75470989-75471008 | MS.gene47005:intron | 40.0% |
| !! | GATTGACTTGAGCAACAGAA+AGG | - | chr5.2:75468542-75468561 | None:intergenic | 40.0% |
| !!! | CTGCACATTGCTTTTTCTGT+GGG | + | chr5.2:75471029-75471048 | MS.gene47005:intron | 40.0% |
| !!! | TCTGCACATTGCTTTTTCTG+TGG | + | chr5.2:75471028-75471047 | MS.gene47005:intron | 40.0% |
| AACACACTTAGGCATCCACT+TGG | + | chr5.2:75469834-75469853 | MS.gene47005:intron | 45.0% | |
| AACGTCCACAACTCAGTCAA+AGG | - | chr5.2:75466739-75466758 | None:intergenic | 45.0% | |
| AAGTTCAGGGTTAAGCTCCA+TGG | - | chr5.2:75469110-75469129 | None:intergenic | 45.0% | |
| ACACACACACATGAGAAGCT+TGG | + | chr5.2:75467994-75468013 | MS.gene47005:intron | 45.0% | |
| ACAGGAAATTGCAGGATGTG+AGG | + | chr5.2:75471156-75471175 | MS.gene47005:CDS | 45.0% | |
| ACGTAGAAAGGGGAAACACT+TGG | - | chr5.2:75467670-75467689 | None:intergenic | 45.0% | |
| AGAAAGGGGAAACACTTGGA+AGG | - | chr5.2:75467666-75467685 | None:intergenic | 45.0% | |
| AGCTGACTACCTAGTGGAAA+AGG | + | chr5.2:75468892-75468911 | MS.gene47005:intron | 45.0% | |
| AGCTTCTCATGTGTGTGTGT+TGG | - | chr5.2:75467994-75468013 | None:intergenic | 45.0% | |
| AGGAAGAAGCTTGGAGAGTA+AGG | - | chr5.2:75465611-75465630 | None:intergenic | 45.0% | |
| ATCCATCGCAGTTCGTAACA+AGG | + | chr5.2:75465657-75465676 | MS.gene47005:CDS | 45.0% | |
| ATGTCGCTGCTTCTGTAGAT+TGG | + | chr5.2:75469143-75469162 | MS.gene47005:CDS | 45.0% | |
| CACATGAGAAGCTTGGAGTT+CGG | + | chr5.2:75468001-75468020 | MS.gene47005:intron | 45.0% | |
| CATCACCAATTTGACCAGAG+TGG | - | chr5.2:75468284-75468303 | None:intergenic | 45.0% | |
| CCATACAATGTTGTACCAGC+GGG | + | chr5.2:75468371-75468390 | MS.gene47005:CDS | 45.0% | |
| GAATGCCACTCTGGTCAAAT+TGG | + | chr5.2:75468276-75468295 | MS.gene47005:CDS | 45.0% | |
| GAGAGAGAAGAGATTGTGAG+AGG | - | chr5.2:75465631-75465650 | None:intergenic | 45.0% | |
| GAGTCTTGGCATTCAGATCA+TGG | + | chr5.2:75471183-75471202 | MS.gene47005:CDS | 45.0% | |
| GATTGTGAGAGGAAGAAGCT+TGG | - | chr5.2:75465620-75465639 | None:intergenic | 45.0% | |
| GCCGAATTTCAATTCGTTGC+CGG | + | chr5.2:75465689-75465708 | MS.gene47005:intron | 45.0% | |
| GCTCAAGTCAATCGTGTTAC+AGG | + | chr5.2:75468549-75468568 | MS.gene47005:CDS | 45.0% | |
| GCTTCTCATGTGTGTGTGTT+GGG | - | chr5.2:75467993-75468012 | None:intergenic | 45.0% | |
| GGAAGAAGCTTGGAGAGTAA+GGG | - | chr5.2:75465610-75465629 | None:intergenic | 45.0% | |
| GGCAACGAATTGAAATTCGG+CGG | - | chr5.2:75465690-75465709 | None:intergenic | 45.0% | |
| GTAATTGGTGAATGCCACTC+TGG | + | chr5.2:75468267-75468286 | MS.gene47005:CDS | 45.0% | |
| GTTACCAGTTCTCCTAACCA+TGG | - | chr5.2:75468686-75468705 | None:intergenic | 45.0% | |
| GTTTGCCTTTGACTGAGTTG+TGG | + | chr5.2:75466731-75466750 | MS.gene47005:CDS | 45.0% | |
| TAACTCAAGTGAAGAGCCTG+TGG | + | chr5.2:75469284-75469303 | MS.gene47005:intron | 45.0% | |
| TACCTTGTTACGAACTGCGA+TGG | - | chr5.2:75465662-75465681 | None:intergenic | 45.0% | |
| TCTTGGCATTCAGATCATGG+AGG | + | chr5.2:75471186-75471205 | MS.gene47005:CDS | 45.0% | |
| TGGACGTTGTATTCGGAATC+TGG | + | chr5.2:75466751-75466770 | MS.gene47005:CDS | 45.0% | |
| TTGGACTTGAGGACAAAGTG+TGG | + | chr5.2:75467295-75467314 | MS.gene47005:intron | 45.0% | |
| TTTGAATCCACCTGCTGAAG+TGG | + | chr5.2:75471213-75471232 | MS.gene47005:CDS | 45.0% | |
| ! | AACCAACTTGCTCTCAAGGA+GGG | - | chr5.2:75470923-75470942 | None:intergenic | 45.0% |
| ! | ATTTTGAACTGGGCCCTCTT+GGG | + | chr5.2:75469688-75469707 | MS.gene47005:intron | 45.0% |
| ! | CCTTTTCTGTGAGTGCAGTT+GGG | + | chr5.2:75469064-75469083 | MS.gene47005:intron | 45.0% |
| ! | GATCAACCAACTTGCTCTCA+AGG | - | chr5.2:75470927-75470946 | None:intergenic | 45.0% |
| ! | GGGTTAGTGAGACAACACAA+AGG | - | chr5.2:75470902-75470921 | None:intergenic | 45.0% |
| ! | GTAGGTACTGTTGGAGTTGA+AGG | + | chr5.2:75470265-75470284 | MS.gene47005:intron | 45.0% |
| ! | GTCTCTCAAAGGTCTGGAAT+TGG | + | chr5.2:75468393-75468412 | MS.gene47005:intron | 45.0% |
| ! | TCCTTTTCTGTGAGTGCAGT+TGG | + | chr5.2:75469063-75469082 | MS.gene47005:intron | 45.0% |
| !! | CATTTTAAGGGGCAAGCTCA+AGG | - | chr5.2:75470970-75470989 | None:intergenic | 45.0% |
| !! | CGTCCTTGTTGTTGTCATGA+GGG | + | chr5.2:75469792-75469811 | MS.gene47005:intron | 45.0% |
| !! | GTCCTTGTTGTTGTCATGAG+GGG | + | chr5.2:75469793-75469812 | MS.gene47005:intron | 45.0% |
| !! | TATTTTGAACTGGGCCCTCT+TGG | + | chr5.2:75469687-75469706 | MS.gene47005:intron | 45.0% |
| !! | TCCTTGTTGTTGTCATGAGG+GGG | + | chr5.2:75469794-75469813 | MS.gene47005:intron | 45.0% |
| !! | TCGTCCTTGTTGTTGTCATG+AGG | + | chr5.2:75469791-75469810 | MS.gene47005:intron | 45.0% |
| !! | TTTGGCTGGCTTGTGAGAAA+AGG | + | chr5.2:75468057-75468076 | MS.gene47005:intron | 45.0% |
| AGTGGTTGAGTGCCTTCTCT+TGG | - | chr5.2:75469977-75469996 | None:intergenic | 50.0% | |
| ATCATCGACCAAGGGAGGAA+TGG | - | chr5.2:75467338-75467357 | None:intergenic | 50.0% | |
| CAGAGTCAAGAGTGAGTCCT+GGG | + | chr5.2:75470296-75470315 | MS.gene47005:CDS | 50.0% | |
| CCCAACTGCACTCACAGAAA+AGG | - | chr5.2:75469067-75469086 | None:intergenic | 50.0% | |
| CCCGCTGGTACAACATTGTA+TGG | - | chr5.2:75468374-75468393 | None:intergenic | 50.0% | |
| GAAGAGCCTGTGGTAAAGAG+AGG | + | chr5.2:75469294-75469313 | MS.gene47005:CDS | 50.0% | |
| GAGAGTTTCTCGTCGCCATA+GGG | + | chr5.2:75468772-75468791 | MS.gene47005:intron | 50.0% | |
| GAGCAACAGAAAGGCCATGA+GGG | - | chr5.2:75468533-75468552 | None:intergenic | 50.0% | |
| GCTGACAGTGGTGAGTAACT+TGG | - | chr5.2:75470832-75470851 | None:intergenic | 50.0% | |
| GGATGTGAGGTCTTGAGTCT+TGG | + | chr5.2:75471169-75471188 | MS.gene47005:CDS | 50.0% | |
| TCACGTAGCTGACTACCTAG+TGG | + | chr5.2:75468886-75468905 | MS.gene47005:intron | 50.0% | |
| TCAGAGTCAAGAGTGAGTCC+TGG | + | chr5.2:75470295-75470314 | MS.gene47005:CDS | 50.0% | |
| TCCTGGGAGTCATGCTCTAA+AGG | + | chr5.2:75470312-75470331 | MS.gene47005:CDS | 50.0% | |
| TGAGAGTTTCTCGTCGCCAT+AGG | + | chr5.2:75468771-75468790 | MS.gene47005:intron | 50.0% | |
| TGAGCAACAGAAAGGCCATG+AGG | - | chr5.2:75468534-75468553 | None:intergenic | 50.0% | |
| ! | AATCTGGTTGCCACTTCAGC+AGG | - | chr5.2:75471226-75471245 | None:intergenic | 50.0% |
| ! | ACCAACTTGCTCTCAAGGAG+GGG | - | chr5.2:75470922-75470941 | None:intergenic | 50.0% |
| ! | CAACCAACTTGCTCTCAAGG+AGG | - | chr5.2:75470924-75470943 | None:intergenic | 50.0% |
| ! | GCAAGCAATTTTGCGTGTGC+CGG | - | chr5.2:75467941-75467960 | None:intergenic | 50.0% |
| ! | TTTTGAACTGGGCCCTCTTG+GGG | + | chr5.2:75469689-75469708 | MS.gene47005:intron | 50.0% |
| !! | TGTAGTGGTGGATTCCCTCA+TGG | + | chr5.2:75468516-75468535 | MS.gene47005:intron | 50.0% |
| ACCCCTCCTTGAGAGCAAGT+TGG | + | chr5.2:75470918-75470937 | MS.gene47005:intron | 55.0% | |
| CAAAGGGGTCATGCGTGACA+TGG | - | chr5.2:75470885-75470904 | None:intergenic | 55.0% | |
| CGACCAAGGGAGGAATGGAA+TGG | - | chr5.2:75467333-75467352 | None:intergenic | 55.0% | |
| GCCCCCTCATGACAACAACA+AGG | - | chr5.2:75469798-75469817 | None:intergenic | 55.0% | |
| GCTTGGAGAGTAAGGGTTCG+AGG | - | chr5.2:75465603-75465622 | None:intergenic | 55.0% | |
| GGAGAGTAAGGGTTCGAGGT+TGG | - | chr5.2:75465599-75465618 | None:intergenic | 55.0% | |
| GTTGTCATGAGGGGGCCATT+AGG | + | chr5.2:75469802-75469821 | MS.gene47005:intron | 55.0% | |
| TATGTGTGTGCGCACTCGCT+CGG | - | chr5.2:75467013-75467032 | None:intergenic | 55.0% | |
| TCCTCGCCTCTCTTTACCAC+AGG | - | chr5.2:75469303-75469322 | None:intergenic | 55.0% | |
| TGGCCATTCCATTCCTCCCT+TGG | + | chr5.2:75467327-75467346 | MS.gene47005:intron | 55.0% | |
| TGTACCAGCGGGTCTCTCAA+AGG | + | chr5.2:75468382-75468401 | MS.gene47005:CDS | 55.0% | |
| TTTGAACTGGGCCCTCTTGG+GGG | + | chr5.2:75469690-75469709 | MS.gene47005:intron | 55.0% | |
| ! | AGCATTGGAGACCCCCAAGA+GGG | - | chr5.2:75469704-75469723 | None:intergenic | 55.0% |
| !! | AAGCATTGGAGACCCCCAAG+AGG | - | chr5.2:75469705-75469724 | None:intergenic | 55.0% |
| !! | CTGGTGCTGCTCCGATGATA+AGG | + | chr5.2:75466770-75466789 | MS.gene47005:CDS | 55.0% |
| !! | GCCTTTAGAGCATGACTCCC+AGG | - | chr5.2:75470316-75470335 | None:intergenic | 55.0% |
| !! | GGCTGGCTTGTGAGAAAAGG+AGG | + | chr5.2:75468060-75468079 | MS.gene47005:intron | 55.0% |
| CAGCGGGTCTCTCAAAGGTC+TGG | + | chr5.2:75468387-75468406 | MS.gene47005:intron | 60.0% | |
| GCCTGTGGTAAAGAGAGGCG+AGG | + | chr5.2:75469299-75469318 | MS.gene47005:CDS | 60.0% | |
| ! | CAGACCTTTGAGAGACCCGC+TGG | - | chr5.2:75468389-75468408 | None:intergenic | 60.0% |
| ! | CTGGTTGCCACTTCAGCAGG+TGG | - | chr5.2:75471223-75471242 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 75465487 | 75471249 | 75465487 | ID=MS.gene47005 |
| chr5.2 | mRNA | 75465487 | 75471249 | 75465487 | ID=MS.gene47005.t1;Parent=MS.gene47005 |
| chr5.2 | exon | 75465487 | 75465678 | 75465487 | ID=MS.gene47005.t1.exon1;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75465487 | 75465678 | 75465487 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75466676 | 75466843 | 75466676 | ID=MS.gene47005.t1.exon2;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75466676 | 75466843 | 75466676 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75467107 | 75467196 | 75467107 | ID=MS.gene47005.t1.exon3;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75467107 | 75467196 | 75467107 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75468267 | 75468403 | 75468267 | ID=MS.gene47005.t1.exon4;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75468267 | 75468403 | 75468267 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75468521 | 75468611 | 75468521 | ID=MS.gene47005.t1.exon5;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75468521 | 75468611 | 75468521 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75469082 | 75469164 | 75469082 | ID=MS.gene47005.t1.exon6;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75469082 | 75469164 | 75469082 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75469293 | 75469399 | 75469293 | ID=MS.gene47005.t1.exon7;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75469293 | 75469399 | 75469293 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75470269 | 75470421 | 75470269 | ID=MS.gene47005.t1.exon8;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75470269 | 75470421 | 75470269 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| chr5.2 | exon | 75471134 | 75471249 | 75471134 | ID=MS.gene47005.t1.exon9;Parent=MS.gene47005.t1 |
| chr5.2 | CDS | 75471134 | 75471249 | 75471134 | ID=cds.MS.gene47005.t1;Parent=MS.gene47005.t1 |
| Gene Sequence |
| Protein sequence |
