AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47791

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47791.t1 MTR_7g056393 93.031 287 20 0 1 287 1 287 0.0 533
MS.gene47791.t1 MTR_4g119410 82.230 287 51 0 1 287 1 287 6.13e-168 470
MS.gene47791.t1 MTR_7g056347 75.261 287 71 0 1 287 1 287 5.57e-163 457
MS.gene47791.t1 MTR_8g006930 77.352 287 65 0 1 287 1 287 1.17e-159 449
MS.gene47791.t1 MTR_7g078010 75.261 287 71 0 1 287 1 287 2.49e-154 433
MS.gene47791.t1 MTR_7g078010 75.261 287 71 0 1 287 1 287 2.07e-153 433
MS.gene47791.t1 MTR_8g063070 63.066 287 106 0 1 287 1 287 4.05e-137 392
MS.gene47791.t1 MTR_8g062600 60.976 287 112 0 1 287 1 287 7.15e-132 379
MS.gene47791.t1 MTR_4g024660 62.021 287 109 0 1 287 1 287 2.62e-131 377
MS.gene47791.t1 MTR_1g093120 62.238 286 102 3 8 287 2 287 9.53e-129 370
MS.gene47791.t1 MTR_1g093110 61.484 283 103 2 11 287 8 290 2.34e-128 370
MS.gene47791.t1 MTR_8g469400 62.021 287 96 2 1 287 1 274 1.10e-126 365
MS.gene47791.t1 MTR_1g093140 62.105 285 99 2 12 287 9 293 7.98e-126 363
MS.gene47791.t1 MTR_2g069020 59.707 273 108 1 17 287 15 287 4.36e-120 348
MS.gene47791.t1 MTR_2g069020 59.707 273 108 1 17 287 15 287 2.30e-119 347
MS.gene47791.t1 MTR_2g069060 57.143 287 105 1 1 287 1 269 1.99e-116 338
MS.gene47791.t1 MTR_2g068950 58.608 273 111 1 17 287 11 283 7.66e-116 338
MS.gene47791.t1 MTR_2g069010 56.777 273 116 1 17 287 17 289 6.08e-115 336
MS.gene47791.t1 MTR_2g068960 58.242 273 112 1 17 287 11 283 2.99e-114 334
MS.gene47791.t1 MTR_8g041620 51.379 290 138 2 1 287 1 290 7.77e-108 318
MS.gene47791.t1 MTR_8g041600 50.000 290 142 2 1 287 1 290 8.50e-107 313
MS.gene47791.t1 MTR_8g009080 52.431 288 136 1 1 287 27 314 3.07e-106 312
MS.gene47791.t1 MTR_8g041600 50.000 290 142 2 1 287 1 290 1.16e-105 312
MS.gene47791.t1 MTR_8g009080 52.431 288 136 1 1 287 27 314 2.44e-105 312
MS.gene47791.t1 MTR_8g009080 51.930 285 136 1 1 284 27 311 4.88e-104 306
MS.gene47791.t1 MTR_2g069060 56.911 246 104 1 44 287 2 247 8.06e-103 300
MS.gene47791.t1 MTR_8g009090 51.228 285 129 4 6 287 4 281 2.49e-102 303
MS.gene47791.t1 MTR_2g069210 51.079 278 135 1 11 287 7 284 1.67e-101 301
MS.gene47791.t1 MTR_2g069090 50.865 289 140 2 1 287 1 289 8.21e-101 300
MS.gene47791.t1 MTR_2g069190 51.590 283 134 2 7 287 7 288 2.72e-100 298
MS.gene47791.t1 MTR_8g028435 50.929 269 125 3 22 287 17 281 3.02e-100 298
MS.gene47791.t1 MTR_1g043760 50.000 270 134 1 18 287 5 273 4.45e-100 297
MS.gene47791.t1 MTR_8g009170 49.630 270 128 4 22 287 17 282 1.23e-99 294
MS.gene47791.t1 MTR_8g009170 49.630 270 128 4 22 287 17 282 4.89e-99 295
MS.gene47791.t1 MTR_8g009160 50.000 268 131 3 21 287 16 281 1.33e-98 294
MS.gene47791.t1 MTR_8g008930 50.174 287 132 5 5 287 3 282 1.52e-98 293
MS.gene47791.t1 MTR_2g069300 51.103 272 131 2 18 287 4 275 5.89e-98 292
MS.gene47791.t1 MTR_0032s0040 46.853 286 137 4 13 287 8 289 1.05e-96 289
MS.gene47791.t1 MTR_1g070185 49.632 272 134 2 17 287 18 287 9.36e-96 286
MS.gene47791.t1 MTR_8g009110 49.071 269 133 4 21 287 16 282 4.95e-95 285
MS.gene47791.t1 MTR_4g117880 50.000 282 132 5 11 287 5 282 1.39e-94 283
MS.gene47791.t1 MTR_1g043770 49.818 275 134 3 13 287 2 272 1.38e-93 279
MS.gene47791.t1 MTR_1g043770 49.818 275 134 3 13 287 2 272 4.94e-93 279
MS.gene47791.t1 MTR_1g043810 48.708 271 137 2 18 287 5 274 9.55e-93 278
MS.gene47791.t1 MTR_1g043810 48.708 271 137 2 18 287 5 274 3.88e-92 277
MS.gene47791.t1 MTR_7g029655 45.714 280 144 2 13 287 8 284 2.85e-91 275
MS.gene47791.t1 MTR_7g056353 50.709 282 111 3 6 287 8 261 9.98e-91 278
MS.gene47791.t1 MTR_1g043775 48.708 271 137 2 18 287 5 274 7.28e-89 267
MS.gene47791.t1 MTR_1g043775 48.708 271 137 2 18 287 5 274 2.87e-88 267
MS.gene47791.t1 MTR_7g105070 46.209 277 147 2 12 287 3 278 1.76e-84 258
MS.gene47791.t1 MTR_7g056370 65.934 182 62 0 27 208 6 187 4.95e-84 251
MS.gene47791.t1 MTR_8g009120 46.269 268 128 6 22 287 17 270 1.30e-82 253
MS.gene47791.t1 MTR_8g009150 44.030 268 126 5 22 287 17 262 3.90e-79 243
MS.gene47791.t1 MTR_1g032220 43.223 273 150 3 17 287 21 290 1.74e-71 224
MS.gene47791.t1 MTR_1g032140 40.702 285 164 3 5 287 2 283 4.54e-69 218
MS.gene47791.t1 MTR_1g032250 40.559 286 163 4 6 287 8 290 5.67e-67 213
MS.gene47791.t1 MTR_4g099380 54.268 164 68 2 19 180 124 282 4.76e-54 177
MS.gene47791.t1 MTR_2g069070 49.444 180 73 1 1 180 1 162 8.70e-52 168
MS.gene47791.t1 MTR_8g009180 45.783 166 74 1 138 287 46 211 3.57e-45 154
MS.gene47791.t1 MTR_3g092890 33.721 258 160 4 36 287 5 257 2.10e-42 148
MS.gene47791.t1 MTR_1g062110 33.210 271 163 6 32 287 26 293 2.85e-42 147
MS.gene47791.t1 MTR_1g062110 33.210 271 163 6 32 287 26 293 6.68e-42 148
MS.gene47791.t1 MTR_1g044105 42.262 168 90 3 18 179 5 171 5.30e-41 140
MS.gene47791.t1 MTR_7g102820 33.216 283 155 9 32 287 25 300 1.49e-40 145
MS.gene47791.t1 MTR_6g015950 40.426 235 126 7 60 287 32 259 2.73e-40 143
MS.gene47791.t1 MTR_8g024120 32.584 267 165 4 31 287 2 263 5.34e-40 142
MS.gene47791.t1 MTR_1g070085 33.457 269 165 5 23 287 1 259 1.97e-39 141
MS.gene47791.t1 MTR_1g070085 33.457 269 165 5 23 287 1 259 1.97e-39 141
MS.gene47791.t1 MTR_2g068840 31.636 275 155 6 32 287 21 281 1.83e-38 139
MS.gene47791.t1 MTR_3g091350 30.903 288 180 8 12 287 2 282 3.50e-38 138
MS.gene47791.t1 MTR_1g070080 35.088 228 137 5 66 287 37 259 4.25e-38 137
MS.gene47791.t1 MTR_4g015790 31.295 278 167 6 33 287 14 290 1.61e-37 136
MS.gene47791.t1 MTR_7g068650 30.035 283 175 7 23 287 5 282 2.48e-37 135
MS.gene47791.t1 MTR_2g068800 32.222 270 141 8 32 287 21 262 1.63e-36 132
MS.gene47791.t1 MTR_8g075890 34.361 227 136 5 67 284 39 261 2.36e-36 133
MS.gene47791.t1 MTR_1g043840 55.238 105 47 0 183 287 52 156 3.49e-36 132
MS.gene47791.t1 MTR_1g043840 36.735 98 56 3 58 150 232 328 3.26e-12 66.2
MS.gene47791.t1 MTR_7g016090 34.361 227 138 5 66 287 40 260 5.78e-36 131
MS.gene47791.t1 MTR_7g016090 34.361 227 138 5 66 287 38 258 6.10e-36 131
MS.gene47791.t1 MTR_2g083030 31.120 241 157 4 54 287 18 256 8.63e-36 131
MS.gene47791.t1 MTR_3g058610 34.071 226 138 4 67 284 39 261 1.81e-35 130
MS.gene47791.t1 MTR_3g091360 32.271 251 160 7 44 287 28 275 1.87e-35 130
MS.gene47791.t1 MTR_5g082750 33.333 264 166 6 33 287 14 276 3.76e-35 130
MS.gene47791.t1 MTR_2g083000 31.556 225 150 4 64 287 30 251 4.34e-35 129
MS.gene47791.t1 MTR_1g070120 32.895 228 142 5 66 287 37 259 1.24e-34 128
MS.gene47791.t1 MTR_8g074070 34.746 236 140 8 61 287 46 276 1.44e-34 128
MS.gene47791.t1 MTR_8g074050 34.188 234 144 7 61 287 46 276 3.34e-34 127
MS.gene47791.t1 MTR_1g070135 32.751 229 141 7 66 287 37 259 4.26e-34 125
MS.gene47791.t1 MTR_1g070135 32.751 229 141 7 66 287 37 259 5.76e-34 126
MS.gene47791.t1 MTR_5g022020 33.772 228 136 4 67 284 39 261 1.28e-33 125
MS.gene47791.t1 MTR_5g032870 33.333 231 143 4 66 287 37 265 1.77e-33 125
MS.gene47791.t1 MTR_3g117420 33.617 235 144 6 61 287 46 276 2.02e-33 125
MS.gene47791.t1 MTR_2g072890 30.213 235 155 5 59 287 44 275 4.16e-33 124
MS.gene47791.t1 MTR_3g045230 31.698 265 165 6 32 287 17 274 4.78e-33 124
MS.gene47791.t1 MTR_3g043900 34.701 268 152 10 32 287 17 273 7.80e-33 124
MS.gene47791.t1 MTR_4g093840 32.000 225 148 5 67 287 62 285 1.14e-32 123
MS.gene47791.t1 MTR_2g072910 28.788 264 177 6 31 287 15 274 2.06e-32 120
MS.gene47791.t1 MTR_7g102720 32.520 246 146 5 51 287 21 255 2.23e-32 122
MS.gene47791.t1 MTR_8g074070 34.783 230 129 8 61 287 46 257 4.81e-32 121
MS.gene47791.t1 MTR_8g075830 33.913 230 133 7 67 284 39 261 5.09e-32 122
MS.gene47791.t1 MTR_5g048850 30.597 268 165 10 31 287 11 268 5.47e-32 120
MS.gene47791.t1 MTR_2g072910 28.897 263 176 6 32 287 16 274 8.48e-32 121
MS.gene47791.t1 MTR_5g048850 30.712 267 164 10 32 287 12 268 2.65e-31 119
MS.gene47791.t1 MTR_5g032880 33.188 229 146 2 66 287 375 603 2.81e-31 123
MS.gene47791.t1 MTR_5g032880 32.751 229 139 5 66 287 37 257 9.27e-30 118
MS.gene47791.t1 MTR_7g062570 30.566 265 168 9 32 287 19 276 3.75e-31 119
MS.gene47791.t1 MTR_7g045650 31.513 238 148 8 58 287 51 281 4.28e-31 118
MS.gene47791.t1 MTR_5g065010 30.268 261 175 7 32 287 3 261 5.29e-31 118
MS.gene47791.t1 MTR_5g048740 28.947 266 169 7 33 287 11 267 8.63e-31 118
MS.gene47791.t1 MTR_0328s0030 29.278 263 175 5 31 287 9 266 1.27e-30 117
MS.gene47791.t1 MTR_5g055820 28.519 270 169 8 31 287 11 269 1.74e-30 117
MS.gene47791.t1 MTR_5g055690 29.851 268 168 10 31 287 11 269 1.94e-30 115
MS.gene47791.t1 MTR_0009s0480 27.273 264 179 5 31 287 10 267 2.02e-30 115
MS.gene47791.t1 MTR_1g033810 28.814 236 157 5 59 287 39 270 2.28e-30 117
MS.gene47791.t1 MTR_4g116010 31.092 238 152 5 56 287 39 270 4.48e-30 116
MS.gene47791.t1 MTR_1g081840 31.276 243 140 8 61 284 47 281 5.26e-30 116
MS.gene47791.t1 MTR_5g055690 29.963 267 167 10 32 287 12 269 8.96e-30 115
MS.gene47791.t1 MTR_0009s0480 27.481 262 177 5 33 287 12 267 1.09e-29 115
MS.gene47791.t1 MTR_7g081710 32.184 261 164 7 35 287 16 271 1.22e-29 115
MS.gene47791.t1 MTR_3g070860 31.092 238 155 5 58 287 41 277 1.29e-29 115
MS.gene47791.t1 MTR_5g048550 28.517 263 175 6 32 287 12 268 1.61e-29 115
MS.gene47791.t1 MTR_0009s0050 27.652 264 176 6 32 287 12 268 1.72e-29 114
MS.gene47791.t1 MTR_5g048570 29.323 266 167 9 32 287 12 266 1.94e-29 114
MS.gene47791.t1 MTR_0009s0050 27.652 264 176 6 32 287 12 268 2.41e-29 114
MS.gene47791.t1 MTR_7g062580 32.018 228 142 8 67 287 55 276 2.54e-29 114
MS.gene47791.t1 MTR_5g005570 30.800 250 153 6 47 287 17 255 2.74e-29 114
MS.gene47791.t1 MTR_2g025120 30.043 233 139 7 66 287 3 222 4.09e-29 110
MS.gene47791.t1 MTR_3g063180 29.167 264 171 6 33 284 10 269 4.65e-29 113
MS.gene47791.t1 MTR_4g087090 29.098 244 144 6 66 287 29 265 5.76e-29 113
MS.gene47791.t1 MTR_3g083370 31.624 234 134 9 66 287 3 222 6.17e-29 110
MS.gene47791.t1 MTR_1g034120 29.167 264 153 7 49 287 14 268 1.61e-28 112
MS.gene47791.t1 MTR_3g088565 31.169 231 143 8 65 287 1 223 1.76e-28 111
MS.gene47791.t1 MTR_5g055680 28.517 263 173 6 33 287 13 268 1.80e-28 112
MS.gene47791.t1 MTR_2g025120 29.915 234 138 8 66 287 3 222 2.03e-28 111
MS.gene47791.t1 MTR_2g437380 29.268 246 158 7 54 287 35 276 2.26e-28 112
MS.gene47791.t1 MTR_8g064200 27.341 267 176 7 31 287 16 274 2.44e-28 112
MS.gene47791.t1 MTR_4g087120 28.195 266 151 7 49 287 14 266 2.56e-28 111
MS.gene47791.t1 MTR_3g083370 31.624 234 134 9 66 287 3 222 2.77e-28 110
MS.gene47791.t1 MTR_8g064200 27.652 264 177 7 32 287 22 279 2.97e-28 111
MS.gene47791.t1 MTR_6g464620 29.958 237 145 4 64 284 61 292 3.03e-28 112
MS.gene47791.t1 MTR_5g048470 28.195 266 176 8 31 287 16 275 3.50e-28 111
MS.gene47791.t1 MTR_7g016080 30.000 220 141 6 67 280 41 253 3.60e-28 110
MS.gene47791.t1 MTR_1g034140 29.583 240 142 5 67 287 27 258 5.31e-28 110
MS.gene47791.t1 MTR_1g034060 28.788 264 154 7 49 287 14 268 6.02e-28 110
MS.gene47791.t1 MTR_7g451860 32.314 229 140 7 67 287 41 262 6.08e-28 110
MS.gene47791.t1 MTR_7g047670 32.314 229 140 7 67 287 41 262 6.08e-28 110
MS.gene47791.t1 MTR_5g055900 28.195 266 172 8 32 287 12 268 7.09e-28 110
MS.gene47791.t1 MTR_4g087110 29.008 262 154 7 49 287 14 266 2.13e-27 109
MS.gene47791.t1 MTR_3g026150 32.068 237 144 8 60 287 53 281 2.68e-27 107
MS.gene47791.t1 MTR_4g087140 29.389 262 150 8 57 287 10 267 2.82e-27 108
MS.gene47791.t1 MTR_1g070085 33.702 181 116 2 111 287 1 181 4.92e-27 106
MS.gene47791.t1 MTR_3g026150 31.646 237 145 8 60 287 53 281 5.71e-27 108
MS.gene47791.t1 MTR_5g011250 26.937 271 180 7 33 287 8 276 8.44e-27 107
MS.gene47791.t1 MTR_4g087100 28.571 266 150 7 49 287 14 266 8.78e-27 107
MS.gene47791.t1 MTR_1g070100 35.503 169 105 2 123 287 9 177 9.09e-27 105
MS.gene47791.t1 MTR_5g055800 25.856 263 184 5 31 287 11 268 1.09e-26 107
MS.gene47791.t1 MTR_7g063730 29.386 228 148 7 67 287 64 285 2.26e-26 106
MS.gene47791.t1 MTR_3g096500 27.734 256 164 7 44 284 45 294 3.97e-26 106
MS.gene47791.t1 MTR_1g048940 29.297 256 165 9 38 284 18 266 8.38e-26 105
MS.gene47791.t1 MTR_1g102070 28.333 240 145 5 64 284 56 287 1.68e-25 104
MS.gene47791.t1 MTR_3g040410 29.870 231 142 6 67 287 6 226 5.44e-25 102
MS.gene47791.t1 MTR_2g102570 29.348 276 139 11 41 287 25 273 2.14e-24 101
MS.gene47791.t1 MTR_6g092620 27.350 234 148 9 65 287 1 223 2.29e-24 100
MS.gene47791.t1 MTR_5g085330 28.750 240 135 7 65 287 3 223 5.04e-24 99.4
MS.gene47791.t1 MTR_3g117485 28.205 234 161 5 61 287 43 276 7.20e-24 99.8
MS.gene47791.t1 MTR_7g084360 64.789 71 24 1 181 250 10 80 8.62e-24 94.4
MS.gene47791.t1 MTR_7g062560 29.596 223 144 5 67 287 62 273 1.22e-23 99.0
MS.gene47791.t1 MTR_1g032240 42.735 117 67 0 165 281 1 117 1.23e-23 95.1
MS.gene47791.t1 MTR_7g062550 29.583 240 132 9 67 287 60 281 1.59e-23 99.0
MS.gene47791.t1 MTR_8g033380 28.631 241 148 5 61 284 48 281 3.45e-23 97.8
MS.gene47791.t1 MTR_3g088745 29.752 242 139 8 64 284 33 264 3.92e-23 97.8
MS.gene47791.t1 MTR_4g074130 29.310 232 142 6 67 287 40 260 4.14e-23 97.4
MS.gene47791.t1 MTR_8g093930 26.148 283 172 7 29 287 7 276 1.28e-22 96.3
MS.gene47791.t1 MTR_5g059130 27.068 266 161 8 40 287 16 266 2.67e-22 95.1
MS.gene47791.t1 MTR_7g062600 29.004 231 146 10 67 287 51 273 3.88e-22 94.7
MS.gene47791.t1 MTR_5g059140 26.866 268 165 9 38 287 12 266 9.51e-22 93.6
MS.gene47791.t1 MTR_8g093980 27.642 246 144 6 60 284 52 284 1.07e-21 94.0
MS.gene47791.t1 MTR_4g087130 26.639 244 152 5 67 287 26 265 3.55e-21 92.4
MS.gene47791.t1 MTR_3g072820 26.275 255 169 7 44 287 18 264 5.44e-21 91.3
MS.gene47791.t1 MTR_3g026150 36.879 141 82 4 153 287 39 178 7.13e-20 87.0
MS.gene47791.t1 MTR_2g437380 29.944 177 108 4 127 287 6 182 7.69e-20 87.0
MS.gene47791.t1 MTR_8g030880 29.060 234 149 6 66 287 4 232 4.34e-19 85.9
MS.gene47791.t1 MTR_3g072810 26.449 276 162 8 33 287 6 261 5.41e-19 85.9
MS.gene47791.t1 MTR_3g117485 28.205 195 134 4 99 287 10 204 1.49e-18 84.0
MS.gene47791.t1 MTR_3g464530 27.642 246 143 9 58 287 25 251 4.56e-18 82.0
MS.gene47791.t1 MTR_2g069130 50.526 95 41 2 71 163 12 102 4.72e-18 79.0
MS.gene47791.t1 MTR_0056s0160 32.353 136 87 3 157 287 18 153 5.94e-18 81.3
MS.gene47791.t1 MTR_3g464530 27.642 246 143 9 58 287 25 251 9.09e-18 82.4
MS.gene47791.t1 MTR_1g070110 29.032 186 94 4 108 287 1 154 3.43e-17 79.3
MS.gene47791.t1 MTR_5g025060 28.761 226 121 10 66 287 5 194 3.57e-17 80.1
MS.gene47791.t1 MTR_0009s0050 30.201 149 96 3 147 287 22 170 3.71e-17 79.3
MS.gene47791.t1 MTR_1g027290 26.383 235 153 7 67 287 29 257 4.03e-17 80.5
MS.gene47791.t1 MTR_0009s0050 30.201 149 96 3 147 287 22 170 4.28e-17 79.3
MS.gene47791.t1 MTR_1g032230 33.333 147 74 3 12 156 10 134 1.00e-16 78.6
MS.gene47791.t1 MTR_5g025050 27.928 222 146 6 67 285 5 215 1.53e-16 78.6
MS.gene47791.t1 MTR_1g011580 26.923 234 141 7 67 287 63 279 4.62e-16 77.8
MS.gene47791.t1 MTR_4g115990 27.419 248 148 8 49 287 25 249 5.47e-16 77.0
MS.gene47791.t1 MTR_2g019370 25.523 239 147 8 67 287 28 253 6.98e-16 77.0
MS.gene47791.t1 MTR_8g461330 26.016 246 138 10 67 287 27 253 1.29e-15 76.3
MS.gene47791.t1 MTR_0009s0050 46.032 63 33 1 226 287 26 88 1.35e-15 73.6
MS.gene47791.t1 MTR_5g025090 26.667 225 151 6 66 287 4 217 1.51e-15 75.5
MS.gene47791.t1 MTR_4g132770 47.541 61 31 1 228 287 32 92 4.41e-15 71.6
MS.gene47791.t1 MTR_5g027230 30.702 228 138 12 66 287 5 218 6.01e-15 73.9
MS.gene47791.t1 MTR_4g123020 27.778 234 144 8 67 287 20 241 7.08e-15 73.9
MS.gene47791.t1 MTR_7g077670 29.536 237 152 8 59 287 3 232 7.89e-15 73.9
MS.gene47791.t1 MTR_0009s0400 44.444 63 34 1 226 287 2 64 5.47e-14 68.6
MS.gene47791.t1 MTR_2g033270 26.446 242 138 10 65 287 17 237 1.05e-13 70.5
MS.gene47791.t1 MTR_4g100600 27.642 246 147 11 63 287 5 240 4.44e-12 65.9
MS.gene47791.t1 MTR_8g041610 43.478 69 38 1 5 72 5 73 9.60e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47791.t1 AT1G06620 53.285 274 127 1 15 287 9 282 2.43e-108 316
MS.gene47791.t1 AT1G06620 53.285 274 127 1 15 287 9 282 4.96e-107 315
MS.gene47791.t1 AT2G30840 54.874 277 121 2 15 287 3 279 4.23e-105 308
MS.gene47791.t1 AT2G30840 54.874 277 121 2 15 287 3 279 7.37e-105 310
MS.gene47791.t1 AT2G30840 54.874 277 121 2 15 287 3 279 9.19e-105 309
MS.gene47791.t1 AT1G06650 50.903 277 129 3 17 287 10 285 5.73e-102 300
MS.gene47791.t1 AT1G06650 50.903 277 129 3 17 287 10 285 1.56e-101 301
MS.gene47791.t1 AT2G30830 53.676 272 124 2 17 287 5 275 1.80e-101 301
MS.gene47791.t1 AT5G59540 50.362 276 131 4 17 287 9 283 2.05e-99 293
MS.gene47791.t1 AT5G59540 50.362 276 131 4 17 287 9 283 1.14e-98 294
MS.gene47791.t1 AT1G03410 49.635 274 134 2 18 287 5 278 1.68e-98 293
MS.gene47791.t1 AT1G03410 48.582 282 141 2 10 287 34 315 4.84e-98 293
MS.gene47791.t1 AT1G06640 49.825 285 134 4 11 287 2 285 5.73e-98 291
MS.gene47791.t1 AT1G06640 49.825 285 134 4 11 287 2 285 3.36e-97 290
MS.gene47791.t1 AT1G06640 49.470 283 134 4 11 285 2 283 1.18e-96 286
MS.gene47791.t1 AT2G25450 47.794 272 142 0 16 287 4 275 3.45e-96 287
MS.gene47791.t1 AT5G59530 48.905 274 137 3 17 287 8 281 3.62e-96 288
MS.gene47791.t1 AT1G06645 47.260 292 145 4 2 287 7 295 2.56e-94 283
MS.gene47791.t1 AT5G43450 47.619 273 138 2 18 287 9 279 1.07e-93 278
MS.gene47791.t1 AT5G43450 47.619 273 138 2 18 287 9 279 6.79e-93 279
MS.gene47791.t1 AT1G03400 46.324 272 136 2 18 287 5 268 4.19e-92 277
MS.gene47791.t1 AT5G43440 47.810 274 137 4 19 287 10 282 4.34e-92 275
MS.gene47791.t1 AT1G04350 47.080 274 139 3 17 287 6 276 9.97e-92 276
MS.gene47791.t1 AT1G03400 46.324 272 136 2 18 287 5 268 2.13e-91 276
MS.gene47791.t1 AT5G43440 47.810 274 137 4 19 287 10 282 5.32e-91 275
MS.gene47791.t1 AT3G61400 43.554 287 154 4 9 287 1 287 6.26e-89 266
MS.gene47791.t1 AT3G61400 43.554 287 154 4 9 287 1 287 4.14e-88 267
MS.gene47791.t1 AT1G04380 46.748 246 127 2 42 287 21 262 2.80e-82 249
MS.gene47791.t1 AT1G04380 46.748 246 127 2 42 287 21 262 3.66e-81 249
MS.gene47791.t1 AT5G24530 36.653 251 139 5 41 287 23 257 3.42e-46 159
MS.gene47791.t1 AT4G10500 36.444 225 138 2 66 287 43 265 1.47e-44 154
MS.gene47791.t1 AT4G10490 34.667 225 142 3 66 287 41 263 7.56e-43 150
MS.gene47791.t1 AT2G36690 34.444 270 161 6 30 287 18 283 4.10e-42 148
MS.gene47791.t1 AT2G36690 34.444 270 161 6 30 287 18 283 4.10e-42 148
MS.gene47791.t1 AT1G55290 33.333 267 157 6 32 287 25 281 8.17e-40 142
MS.gene47791.t1 AT3G13610 31.034 261 170 5 32 287 26 281 9.97e-40 142
MS.gene47791.t1 AT3G12900 30.769 260 172 5 32 287 21 276 3.78e-38 138
MS.gene47791.t1 AT5G05600 31.295 278 181 6 19 287 13 289 1.45e-37 135
MS.gene47791.t1 AT5G05600 31.295 278 181 6 19 287 13 289 6.78e-37 135
MS.gene47791.t1 AT2G44800 32.000 275 173 8 19 284 2 271 4.02e-34 127
MS.gene47791.t1 AT4G21200 33.333 234 133 8 64 287 39 259 4.53e-34 127
MS.gene47791.t1 AT3G11180 32.210 267 165 6 33 287 56 318 1.72e-33 126
MS.gene47791.t1 AT3G11180 32.210 267 165 6 33 287 56 318 1.92e-33 126
MS.gene47791.t1 AT3G51240 34.199 231 131 7 67 284 38 260 1.92e-33 125
MS.gene47791.t1 AT2G38240 29.811 265 171 7 33 287 12 271 2.64e-33 125
MS.gene47791.t1 AT4G25310 31.076 251 160 7 44 287 29 273 2.89e-32 122
MS.gene47791.t1 AT1G17020 29.344 259 171 7 38 287 23 278 7.07e-31 119
MS.gene47791.t1 AT3G55970 31.852 270 167 8 33 287 14 281 9.26e-31 117
MS.gene47791.t1 AT3G55970 31.852 270 167 8 33 287 14 281 1.79e-30 117
MS.gene47791.t1 AT3G60290 31.769 277 175 8 20 287 3 274 2.34e-30 117
MS.gene47791.t1 AT5G07480 32.174 230 141 5 67 284 44 270 3.78e-30 116
MS.gene47791.t1 AT4G25420 28.676 272 163 4 40 284 21 288 6.38e-30 115
MS.gene47791.t1 AT4G25420 28.676 272 163 4 40 284 21 288 2.16e-29 115
MS.gene47791.t1 AT4G25300 30.502 259 167 8 38 287 22 276 2.56e-29 114
MS.gene47791.t1 AT1G77330 29.915 234 144 8 65 287 1 225 4.62e-29 112
MS.gene47791.t1 AT4G22880 28.832 274 172 9 33 287 7 276 6.37e-29 113
MS.gene47791.t1 AT4G22880 28.832 274 172 9 33 287 7 276 6.37e-29 113
MS.gene47791.t1 AT4G22880 28.832 274 172 9 33 287 7 276 6.37e-29 113
MS.gene47791.t1 AT1G78550 30.488 246 138 8 61 287 45 276 1.11e-28 112
MS.gene47791.t1 AT3G19000 29.167 240 148 5 67 287 32 268 2.18e-28 110
MS.gene47791.t1 AT3G19000 29.167 240 148 5 67 287 32 268 8.23e-28 110
MS.gene47791.t1 AT5G12270 30.877 285 163 12 22 287 9 278 9.09e-28 110
MS.gene47791.t1 AT4G16330 31.535 241 149 6 52 284 53 285 1.54e-27 109
MS.gene47791.t1 AT1G17010 28.794 257 169 8 41 287 26 278 7.29e-27 107
MS.gene47791.t1 AT5G07200 28.975 283 177 6 21 286 14 289 9.15e-27 108
MS.gene47791.t1 AT1G05010 30.870 230 141 9 66 287 3 222 1.03e-25 104
MS.gene47791.t1 AT3G19010 29.528 254 146 9 58 287 19 263 1.41e-25 103
MS.gene47791.t1 AT3G19010 29.528 254 146 9 58 287 19 263 1.51e-25 104
MS.gene47791.t1 AT3G19010 29.528 254 146 9 58 287 19 263 1.51e-25 104
MS.gene47791.t1 AT1G60980 28.571 238 152 4 65 286 55 290 1.95e-25 104
MS.gene47791.t1 AT3G21420 28.839 267 176 6 33 287 17 281 3.67e-25 103
MS.gene47791.t1 AT1G12010 28.632 234 143 8 65 287 5 225 4.83e-25 102
MS.gene47791.t1 AT1G62380 27.966 236 148 9 62 287 2 225 5.24e-25 102
MS.gene47791.t1 AT1G50960 27.801 241 168 4 50 287 23 260 9.52e-25 101
MS.gene47791.t1 AT5G51810 28.879 232 149 3 64 284 60 286 2.29e-24 100
MS.gene47791.t1 AT5G51810 28.879 232 149 3 64 284 60 286 7.75e-24 100
MS.gene47791.t1 AT3G51240 37.838 148 73 6 150 284 35 176 1.38e-23 97.4
MS.gene47791.t1 AT5G08640 30.435 230 140 7 66 284 42 262 2.99e-23 97.8
MS.gene47791.t1 AT5G08640 30.435 230 140 7 66 284 42 262 2.99e-23 97.8
MS.gene47791.t1 AT1G78550 28.986 207 117 6 98 287 5 198 6.49e-23 95.9
MS.gene47791.t1 AT1G15550 29.150 247 125 11 66 287 56 277 1.46e-21 93.2
MS.gene47791.t1 AT2G19590 28.936 235 146 11 62 287 6 228 1.59e-21 92.4
MS.gene47791.t1 AT5G20400 25.475 263 187 5 33 287 9 270 2.24e-21 92.8
MS.gene47791.t1 AT5G63590 28.689 244 132 7 63 284 10 233 1.20e-20 90.1
MS.gene47791.t1 AT1G80340 30.769 247 135 8 59 287 42 270 1.49e-20 90.5
MS.gene47791.t1 AT1G44090 26.766 269 148 8 44 284 43 290 1.02e-19 88.6
MS.gene47791.t1 AT4G16330 36.090 133 81 1 156 284 47 179 1.35e-19 86.3
MS.gene47791.t1 AT5G20550 26.840 231 159 6 65 287 43 271 2.49e-19 87.0
MS.gene47791.t1 AT1G49390 25.652 230 164 4 64 287 42 270 6.46e-19 85.9
MS.gene47791.t1 AT5G63595 27.016 248 136 8 49 284 8 222 7.53e-19 84.7
MS.gene47791.t1 AT5G54000 26.522 230 162 4 64 287 43 271 2.07e-18 84.3
MS.gene47791.t1 AT1G30040 25.941 239 144 8 66 287 30 252 5.52e-18 82.0
MS.gene47791.t1 AT1G80330 28.692 237 142 8 66 287 48 272 3.07e-17 81.3
MS.gene47791.t1 AT3G19010 26.000 250 130 9 58 287 19 233 5.88e-17 80.1
MS.gene47791.t1 AT4G25310 26.000 250 146 7 44 287 29 245 6.05e-17 80.1
MS.gene47791.t1 AT4G25300 38.182 110 66 2 180 287 73 182 1.10e-16 78.2
MS.gene47791.t1 AT5G07480 37.931 116 64 3 176 284 47 161 1.27e-16 77.8
MS.gene47791.t1 AT1G78440 24.896 241 145 8 67 287 18 242 3.38e-16 77.8
MS.gene47791.t1 AT5G63600 27.273 242 149 8 57 286 22 248 1.14e-15 76.3
MS.gene47791.t1 AT5G63600 26.971 241 151 8 57 286 22 248 1.15e-15 76.3
MS.gene47791.t1 AT4G23340 28.333 240 143 9 63 287 6 231 1.96e-15 75.5
MS.gene47791.t1 AT2G19590 29.798 198 120 10 99 287 26 213 2.55e-15 75.1
MS.gene47791.t1 AT5G63580 28.261 230 143 6 66 284 18 236 8.65e-15 72.8
MS.gene47791.t1 AT5G63580 28.261 230 143 6 66 284 18 236 8.79e-15 72.8
MS.gene47791.t1 AT5G58660 26.172 256 142 12 65 287 32 273 7.73e-14 70.5
MS.gene47791.t1 AT4G21690 25.806 248 133 10 67 285 47 272 9.32e-14 70.9
MS.gene47791.t1 AT5G54000 26.042 192 135 4 102 287 1 191 1.17e-13 69.7
MS.gene47791.t1 AT5G58660 26.172 256 142 12 65 287 32 273 1.42e-13 70.5
MS.gene47791.t1 AT1G49390 25.000 192 137 4 102 287 1 191 2.27e-13 68.9
MS.gene47791.t1 AT2G06960 55.556 54 19 1 228 281 33 81 1.44e-12 64.3
MS.gene47791.t1 AT3G46490 25.969 258 161 7 57 287 2 256 5.15e-12 65.5
MS.gene47791.t1 AT1G14130 25.217 230 144 11 67 285 9 221 5.66e-12 65.5
MS.gene47791.t1 AT3G46490 25.969 258 161 7 57 287 2 256 7.78e-12 65.1
MS.gene47791.t1 AT5G51310 28.980 245 137 8 65 287 3 232 8.16e-12 65.1
MS.gene47791.t1 AT1G47990 27.542 236 144 7 67 287 15 238 9.46e-12 65.1
MS.gene47791.t1 AT4G23340 39.759 83 46 2 209 287 31 113 8.29e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGACATGCACTTTGAATT+TGG 0.178400 7.4:+47255941 None:intergenic
GGTAGTTGTTCTTGTTTAAA+TGG 0.215646 7.4:+47255697 None:intergenic
GTCAAAGGTTTGGTGGAGTC+TGG 0.222236 7.4:-47256105 MS.gene47791:CDS
CCCATTGTTAATTCAGGTTC+AGG 0.290264 7.4:+47254843 None:intergenic
GAAGTGCCCATTGTTAATTC+AGG 0.320550 7.4:+47254837 None:intergenic
AAGTTCTTCATGAGGATAGA+TGG 0.323976 7.4:-47254755 MS.gene47791:CDS
TTAGTGGCCAAGCTGCTAAT+TGG 0.324449 7.4:-47255753 MS.gene47791:CDS
CACAACAATTCAACTCTTTG+AGG 0.325281 7.4:+47254904 None:intergenic
GAAGCTACTATCAGTATGTT+TGG 0.342748 7.4:+47254815 None:intergenic
TAATATTTCCATTGATGTCT+TGG 0.353571 7.4:-47255890 MS.gene47791:CDS
TCAAAGGTTTGGTGGAGTCT+GGG 0.361579 7.4:-47256104 MS.gene47791:CDS
CTTAGTTAATTACCTGCATA+TGG 0.366858 7.4:+47255672 None:intergenic
TCCAATGGAACCTTGTTTAG+TGG 0.367156 7.4:-47255769 MS.gene47791:CDS
CATAATCTTTGAGTTATTGT+CGG 0.452127 7.4:-47254952 MS.gene47791:CDS
GTCTTGGATGAAATGATTCA+TGG 0.464116 7.4:-47255874 MS.gene47791:CDS
GCCACTAAACAAGGTTCCAT+TGG 0.486760 7.4:+47255768 None:intergenic
GCTAATTGGAGAGATACAAT+TGG 0.490360 7.4:-47255739 MS.gene47791:CDS
AAAGTTATGTATTTCTCCAA+TGG 0.490517 7.4:-47255784 MS.gene47791:CDS
GAGTTATTGTCGGAGGCACT+AGG 0.492714 7.4:-47254942 MS.gene47791:CDS
CATTTCATCCAAGACATCAA+TGG 0.493682 7.4:+47255882 None:intergenic
TGTTCTTGTTTAAATGGATG+TGG 0.504103 7.4:+47255703 None:intergenic
AAAAGCGGGTGTCAAAGGTT+TGG 0.504940 7.4:-47256115 MS.gene47791:CDS
TATATCTTTGAGATCTATGA+TGG 0.506672 7.4:+47255999 None:intergenic
GATTCAAAAGCGGGTGTCAA+AGG 0.507740 7.4:-47256120 MS.gene47791:CDS
GTTAATTCAGGTTCAGGACA+TGG 0.511748 7.4:+47254849 None:intergenic
CCTGAACCTGAATTAACAAT+GGG 0.514445 7.4:-47254843 MS.gene47791:CDS
TCCTATACATGGAGCTCTTG+TGG 0.520084 7.4:-47254721 MS.gene47791:CDS
TCTATCATAAGTGGAATTGG+TGG 0.523018 7.4:+47256167 None:intergenic
TATCTCTCCAATTAGCAGCT+TGG 0.523678 7.4:+47255746 None:intergenic
AGCAGCTTGGCCACTAAACA+AGG 0.524987 7.4:+47255759 None:intergenic
GTCAATGTTCCTCCTATACA+TGG 0.531724 7.4:-47254732 MS.gene47791:CDS
GTTAATTACCTGCATATGGA+TGG 0.532420 7.4:+47255676 None:intergenic
AGTTCTTCATGAGGATAGAT+GGG 0.537766 7.4:-47254754 MS.gene47791:CDS
CATCTTGTTCATGAAAACTA+CGG 0.539165 7.4:+47255848 None:intergenic
AGCGGGTGTCAAAGGTTTGG+TGG 0.539761 7.4:-47256112 MS.gene47791:CDS
TTAATTCAGGTTCAGGACAT+GGG 0.543925 7.4:+47254850 None:intergenic
AACAACTACCATCCATATGC+AGG 0.544718 7.4:-47255684 MS.gene47791:intron
CAAAGGTTTGGTGGAGTCTG+GGG 0.546548 7.4:-47256103 MS.gene47791:CDS
ACCACAAGAGCTCCATGTAT+AGG 0.554318 7.4:+47254720 None:intergenic
AATTCAAAGTGCATGTCATG+TGG 0.562036 7.4:-47255938 MS.gene47791:CDS
AAAGAGTTGAATTGTTGTGA+AGG 0.564849 7.4:-47254900 MS.gene47791:CDS
TGTGAAGGACTCTTTATCCA+AGG 0.567857 7.4:-47254885 MS.gene47791:CDS
TCCTGAACCTGAATTAACAA+TGG 0.576348 7.4:-47254844 MS.gene47791:CDS
CTTCTACAAGATCAACTTGG+TGG 0.583500 7.4:-47254783 MS.gene47791:CDS
AAACGTAGGAGATCTTCTAC+AGG 0.589430 7.4:-47254697 None:intergenic
AATCTTTGAGTTATTGTCGG+AGG 0.598747 7.4:-47254949 MS.gene47791:CDS
CGATCAAGCTCGGCGCGAAG+AGG 0.599496 7.4:-47255971 MS.gene47791:CDS
CATACTAGCAAGTTGGACAT+CGG 0.603580 7.4:-47256057 MS.gene47791:CDS
TAATTCAGGTTCAGGACATG+GGG 0.604236 7.4:+47254851 None:intergenic
TGGTCTTCAAGTTCTTCATG+AGG 0.614016 7.4:-47254763 MS.gene47791:CDS
ACAAGAGCTCCATGTATAGG+AGG 0.615446 7.4:+47254723 None:intergenic
ATTCAAAGTGCATGTCATGT+GGG 0.630864 7.4:-47255937 MS.gene47791:CDS
ATATACACATCGATCAAGCT+CGG 0.631334 7.4:-47255981 MS.gene47791:CDS
TTACTTCTACAAGATCAACT+TGG 0.634996 7.4:-47254786 MS.gene47791:CDS
ATATCTTTGAGATCTATGAT+GGG 0.645832 7.4:+47256000 None:intergenic
CAAAGTGCATGTCATGTGGG+AGG 0.657705 7.4:-47255934 MS.gene47791:CDS
GGAGCTCTTGTGGTAAACGT+AGG 0.667919 7.4:-47254711 MS.gene47791:CDS
AATTCAGGTTCAGGACATGG+GGG 0.728997 7.4:+47254852 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTCATTATAAATTGAT+GGG + chr7.4:47255270-47255289 None:intergenic 15.0%
!! AAAATATTCCCAAAAAATAA+GGG - chr7.4:47255914-47255933 MS.gene47791:CDS 15.0%
!! AAATCAAACATTAATAGATA+TGG - chr7.4:47255649-47255668 MS.gene47791:intron 15.0%
!! ATAAAATATTCCAAAAGATA+AGG - chr7.4:47255853-47255872 MS.gene47791:CDS 15.0%
!! TAAAATATTCCAAAAGATAA+GGG - chr7.4:47255854-47255873 MS.gene47791:CDS 15.0%
!! TAAAATATTCCCAAAAAATA+AGG - chr7.4:47255913-47255932 MS.gene47791:CDS 15.0%
!! AAAAAACACAAATCAATTAG+AGG - chr7.4:47254706-47254725 MS.gene47791:CDS 20.0%
!! GAAAACTCATTATAAATTGA+TGG + chr7.4:47255271-47255290 None:intergenic 20.0%
!! TAATTTGAAGGAAAAAAACT+CGG - chr7.4:47255586-47255605 MS.gene47791:intron 20.0%
! AAAGTTATGTATTTCTCCAA+TGG - chr7.4:47255115-47255134 MS.gene47791:intron 25.0%
! TAACTACGAGTATAATTTGA+AGG - chr7.4:47255574-47255593 MS.gene47791:intron 25.0%
! TAATATTTCCATTGATGTCT+TGG - chr7.4:47255009-47255028 MS.gene47791:intron 25.0%
! TTCAAATTATACTCGTAGTT+AGG + chr7.4:47255575-47255594 None:intergenic 25.0%
!! CATAATCTTTGAGTTATTGT+CGG - chr7.4:47255947-47255966 MS.gene47791:CDS 25.0%
!! CATTTGAAATATTCCCAAAA+GGG - chr7.4:47255822-47255841 MS.gene47791:CDS 25.0%
!! TTCAGTTTTTCTATCATAAG+TGG + chr7.4:47254744-47254763 None:intergenic 25.0%
!! TTTTCTATCATAAGTGGAAT+TGG + chr7.4:47254738-47254757 None:intergenic 25.0%
!!! ATATCTTTGAGATCTATGAT+GGG + chr7.4:47254902-47254921 None:intergenic 25.0%
!!! TATATCTTTGAGATCTATGA+TGG + chr7.4:47254903-47254922 None:intergenic 25.0%
!!! TTAGGAAAATGCTATTTCAA+GGG - chr7.4:47255300-47255319 MS.gene47791:intron 25.0%
!!! TTTAGGAAAATGCTATTTCA+AGG - chr7.4:47255299-47255318 MS.gene47791:intron 25.0%
AAAGAGTTGAATTGTTGTGA+AGG - chr7.4:47255999-47256018 MS.gene47791:CDS 30.0%
ATTCCAAAAGATAAGGGATT+TGG - chr7.4:47255860-47255879 MS.gene47791:CDS 30.0%
CATCTTGTTCATGAAAACTA+CGG + chr7.4:47255054-47255073 None:intergenic 30.0%
CTTAGTTAATTACCTGCATA+TGG + chr7.4:47255230-47255249 None:intergenic 30.0%
GAAGACTCATGAATGTATAA+TGG + chr7.4:47255549-47255568 None:intergenic 30.0%
TAACACCTTCAAGAACTTTA+TGG - chr7.4:47255683-47255702 MS.gene47791:intron 30.0%
TCCCAAAAAATAAGGGATTT+GGG - chr7.4:47255921-47255940 MS.gene47791:CDS 30.0%
TTACTTCTACAAGATCAACT+TGG - chr7.4:47256113-47256132 MS.gene47791:CDS 30.0%
TTCCAAAAGATAAGGGATTT+GGG - chr7.4:47255861-47255880 MS.gene47791:CDS 30.0%
TTCCCAAAAAATAAGGGATT+TGG - chr7.4:47255920-47255939 MS.gene47791:CDS 30.0%
TTTCAAATGGACATGATACA+TGG + chr7.4:47255811-47255830 None:intergenic 30.0%
! CATTTTTCATACTAGCAAGT+TGG - chr7.4:47254835-47254854 MS.gene47791:CDS 30.0%
! CCATTTGAAATATTCCCAAA+AGG - chr7.4:47255821-47255840 MS.gene47791:CDS 30.0%
! GGTAGTTGTTCTTGTTTAAA+TGG + chr7.4:47255205-47255224 None:intergenic 30.0%
! TGTTCTTGTTTAAATGGATG+TGG + chr7.4:47255199-47255218 None:intergenic 30.0%
! TTTATCACACTATCCCTTTT+GGG + chr7.4:47255838-47255857 None:intergenic 30.0%
! TTTTATCACACTATCCCTTT+TGG + chr7.4:47255839-47255858 None:intergenic 30.0%
!! AGCTTTTGATGATTCAAAAG+CGG - chr7.4:47254769-47254788 MS.gene47791:CDS 30.0%
!! CCTTTTGGGAATATTTCAAA+TGG + chr7.4:47255824-47255843 None:intergenic 30.0%
!! TTTGCTATTTGCCTAATACA+AGG + chr7.4:47255413-47255432 None:intergenic 30.0%
AAGTTCTTCATGAGGATAGA+TGG - chr7.4:47256144-47256163 MS.gene47791:CDS 35.0%
AATTCAAAGTGCATGTCATG+TGG - chr7.4:47254961-47254980 MS.gene47791:CDS 35.0%
AGTTCTTCATGAGGATAGAT+GGG - chr7.4:47256145-47256164 MS.gene47791:CDS 35.0%
ATATACACATCGATCAAGCT+CGG - chr7.4:47254918-47254937 MS.gene47791:CDS 35.0%
ATTCAAAGTGCATGTCATGT+GGG - chr7.4:47254962-47254981 MS.gene47791:CDS 35.0%
CAAGTCCATAAAGTTCTTGA+AGG + chr7.4:47255691-47255710 None:intergenic 35.0%
CACAACAATTCAACTCTTTG+AGG + chr7.4:47255998-47256017 None:intergenic 35.0%
CATGACATGCACTTTGAATT+TGG + chr7.4:47254961-47254980 None:intergenic 35.0%
CATTTCATCCAAGACATCAA+TGG + chr7.4:47255020-47255039 None:intergenic 35.0%
CCTGAACCTGAATTAACAAT+GGG - chr7.4:47256056-47256075 MS.gene47791:CDS 35.0%
GAAGCTACTATCAGTATGTT+TGG + chr7.4:47256087-47256106 None:intergenic 35.0%
GCTAATTGGAGAGATACAAT+TGG - chr7.4:47255160-47255179 MS.gene47791:intron 35.0%
GTCTTGGATGAAATGATTCA+TGG - chr7.4:47255025-47255044 MS.gene47791:intron 35.0%
GTTAATTACCTGCATATGGA+TGG + chr7.4:47255226-47255245 None:intergenic 35.0%
TATTTGCCTAATACAAGGAG+TGG + chr7.4:47255408-47255427 None:intergenic 35.0%
TCCTGAACCTGAATTAACAA+TGG - chr7.4:47256055-47256074 MS.gene47791:CDS 35.0%
TCGCGAAACATTCGTAATAA+TGG - chr7.4:47255454-47255473 MS.gene47791:intron 35.0%
TCTATCATAAGTGGAATTGG+TGG + chr7.4:47254735-47254754 None:intergenic 35.0%
TGCTAGTATGAAAAATGCGT+GGG + chr7.4:47254832-47254851 None:intergenic 35.0%
TTGCTAGTATGAAAAATGCG+TGG + chr7.4:47254833-47254852 None:intergenic 35.0%
! AACCCAAATCCCTTATCTTT+TGG + chr7.4:47255866-47255885 None:intergenic 35.0%
! AATCTTTGAGTTATTGTCGG+AGG - chr7.4:47255950-47255969 MS.gene47791:CDS 35.0%
! TGAGTTTTCGCTGTAGTTTT+AGG - chr7.4:47255282-47255301 MS.gene47791:intron 35.0%
! TGATGGGCAAGAACATAATT+AGG + chr7.4:47255254-47255273 None:intergenic 35.0%
! TTAATTCAGGTTCAGGACAT+GGG + chr7.4:47256052-47256071 None:intergenic 35.0%
!! GCTTTTGATGATTCAAAAGC+GGG - chr7.4:47254770-47254789 MS.gene47791:CDS 35.0%
!! TCTTGAAGGTGTTACTTCAT+CGG + chr7.4:47255677-47255696 None:intergenic 35.0%
!!! AGCCCAAATCCCTTATTTTT+TGG + chr7.4:47255926-47255945 None:intergenic 35.0%
!!! GCCCAAATCCCTTATTTTTT+GGG + chr7.4:47255925-47255944 None:intergenic 35.0%
AACAACTACCATCCATATGC+AGG - chr7.4:47255215-47255234 MS.gene47791:intron 40.0%
CTTCTACAAGATCAACTTGG+TGG - chr7.4:47256116-47256135 MS.gene47791:CDS 40.0%
GACATGATACATGGCTGAAA+TGG + chr7.4:47255802-47255821 None:intergenic 40.0%
GTCAATGTTCCTCCTATACA+TGG - chr7.4:47256167-47256186 MS.gene47791:CDS 40.0%
TATCTCTCCAATTAGCAGCT+TGG + chr7.4:47255156-47255175 None:intergenic 40.0%
TCAAGGGAATGATATGCTTC+AGG - chr7.4:47255316-47255335 MS.gene47791:intron 40.0%
TCAATAAGTGCCACATGTGT+CGG + chr7.4:47255350-47255369 None:intergenic 40.0%
TGTGAAGGACTCTTTATCCA+AGG - chr7.4:47256014-47256033 MS.gene47791:CDS 40.0%
TTTCCACCACTCCTTGTATT+AGG - chr7.4:47255399-47255418 MS.gene47791:intron 40.0%
! CATACTAGCAAGTTGGACAT+CGG - chr7.4:47254842-47254861 MS.gene47791:CDS 40.0%
! CCCATTGTTAATTCAGGTTC+AGG + chr7.4:47256059-47256078 None:intergenic 40.0%
! GAAGTGCCCATTGTTAATTC+AGG + chr7.4:47256065-47256084 None:intergenic 40.0%
! GTTAATTCAGGTTCAGGACA+TGG + chr7.4:47256053-47256072 None:intergenic 40.0%
! TAATTCAGGTTCAGGACATG+GGG + chr7.4:47256051-47256070 None:intergenic 40.0%
! TCCAATGGAACCTTGTTTAG+TGG - chr7.4:47255130-47255149 MS.gene47791:intron 40.0%
! TGGTCTTCAAGTTCTTCATG+AGG - chr7.4:47256136-47256155 MS.gene47791:CDS 40.0%
! TGTGGCACTTATTGATTGCA+TGG - chr7.4:47255355-47255374 MS.gene47791:intron 40.0%
!!! TCATGTGGGAGGATTTTTTC+AGG - chr7.4:47254976-47254995 MS.gene47791:CDS 40.0%
AAAAGCGGGTGTCAAAGGTT+TGG - chr7.4:47254784-47254803 MS.gene47791:CDS 45.0%
ACAAGAGCTCCATGTATAGG+AGG + chr7.4:47256179-47256198 None:intergenic 45.0%
ACCACAAGAGCTCCATGTAT+AGG + chr7.4:47256182-47256201 None:intergenic 45.0%
ATGGGGGATAGTAATGACCT+TGG + chr7.4:47256034-47256053 None:intergenic 45.0%
CAATAAGTGCCACATGTGTC+GGG + chr7.4:47255349-47255368 None:intergenic 45.0%
GATTCAAAAGCGGGTGTCAA+AGG - chr7.4:47254779-47254798 MS.gene47791:CDS 45.0%
GCCACTAAACAAGGTTCCAT+TGG + chr7.4:47255134-47255153 None:intergenic 45.0%
TCCTATACATGGAGCTCTTG+TGG - chr7.4:47256178-47256197 MS.gene47791:CDS 45.0%
TTAGTGGCCAAGCTGCTAAT+TGG - chr7.4:47255146-47255165 MS.gene47791:intron 45.0%
TTGCCTAATACAAGGAGTGG+TGG + chr7.4:47255405-47255424 None:intergenic 45.0%
! AATTCAGGTTCAGGACATGG+GGG + chr7.4:47256050-47256069 None:intergenic 45.0%
!! TCAAAGGTTTGGTGGAGTCT+GGG - chr7.4:47254795-47254814 MS.gene47791:CDS 45.0%
AGCAGCTTGGCCACTAAACA+AGG + chr7.4:47255143-47255162 None:intergenic 50.0%
CAAAGTGCATGTCATGTGGG+AGG - chr7.4:47254965-47254984 MS.gene47791:CDS 50.0%
GGAACATTTCCCGACACATG+TGG - chr7.4:47255337-47255356 MS.gene47791:intron 50.0%
GGAGCTCTTGTGGTAAACGT+AGG - chr7.4:47256188-47256207 MS.gene47791:CDS 50.0%
!! CAAAGGTTTGGTGGAGTCTG+GGG - chr7.4:47254796-47254815 MS.gene47791:CDS 50.0%
!! GAGTTATTGTCGGAGGCACT+AGG - chr7.4:47255957-47255976 MS.gene47791:CDS 50.0%
!! GTCAAAGGTTTGGTGGAGTC+TGG - chr7.4:47254794-47254813 MS.gene47791:CDS 50.0%
AGCGGGTGTCAAAGGTTTGG+TGG - chr7.4:47254787-47254806 MS.gene47791:CDS 55.0%
CGATCAAGCTCGGCGCGAAG+AGG - chr7.4:47254928-47254947 MS.gene47791:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 47254698 47256223 47254698 ID=MS.gene47791
chr7.4 mRNA 47254698 47256223 47254698 ID=MS.gene47791.t1;Parent=MS.gene47791
chr7.4 exon 47255685 47256223 47255685 ID=MS.gene47791.t1.exon1;Parent=MS.gene47791.t1
chr7.4 CDS 47255685 47256223 47255685 ID=cds.MS.gene47791.t1;Parent=MS.gene47791.t1
chr7.4 exon 47254698 47255019 47254698 ID=MS.gene47791.t1.exon2;Parent=MS.gene47791.t1
chr7.4 CDS 47254698 47255019 47254698 ID=cds.MS.gene47791.t1;Parent=MS.gene47791.t1
Gene Sequence

>MS.gene47791

ATGGTGGTAAAAAACACAAATCAATTAGAGGAATCCACCAATTCCACTTATGATAGAAAAACTGAAGTGAAAGCTTTTGATGATTCAAAAGCGGGTGTCAAAGGTTTGGTGGAGTCTGGGGTGTCAAAGATCCCACGCATTTTTCATACTAGCAAGTTGGACATCGGTGAAAACTCAACTAGTGATTCTAAGTTGAGTATTCCCATCATAGATCTCAAAGATATACACATCGATCAAGCTCGGCGCGAAGAGGTAATTGACCAAATTCAAAGTGCATGTCATGTGGGAGGATTTTTTCAGGTAATTAATCATAATATTTCCATTGATGTCTTGGATGAAATGATTCATGGAATCCGTAGTTTTCATGAACAAGATGTTGATGTAAGAAAAGAGTTTTACACTCGTGATTTAAAGAAAAAAGTTATGTATTTCTCCAATGGAACCTTGTTTAGTGGCCAAGCTGCTAATTGGAGAGATACAATTGGTTTTGCTGTTGCTCCACATCCATTTAAACAAGAACAACTACCATCCATATGCAGGTAATTAACTAAGTCCTAATTATGTTCTTGCCCATCAATTTATAATGAGTTTTCGCTGTAGTTTTAGGAAAATGCTATTTCAAGGGAATGATATGCTTCAGGAACATTTCCCGACACATGTGGCACTTATTGATTGCATGGTCAATTAGTCACTTGTTGTCTTTTCCACCACTCCTTGTATTAGGCAAATAGCAAATTTTCATTGTGCATGTTTAATTCGCGAAACATTCGTAATAATGGTTTTCGCTTTATATAGCATTACACGTTGATTTATTATGTTTAATTTTATTATGTTTTTATTTATTAATTCCATTATACATTCATGAGTCTTCTCACCTAACTACGAGTATAATTTGAAGGAAAAAAACTCGGTTTTTATTTTATTTTACAATATCAATAGTTTTGAAACGAAAAATCAAACATTAATAGATATGGAACCGATGAAGTAACACCTTCAAGAACTTTATGGACTTGCATTGCAGCGCTTATGACATATGATACAATCAAGTTAACTAGATTTCACATTTGTTACGATACATGACATATGATCACGATCACGTGTCCATTTCAGCCATGTATCATGTCCATTTGAAATATTCCCAAAAGGGATAGTGTGATAAAATATTCCAAAAGATAAGGGATTTGGGTTTCTTACATGTTTGCAGAGATAGTGTGATAAAATATTCCCAAAAAATAAGGGATTTGGGCTTCATAATCTTTGAGTTATTGTCGGAGGCACTAGGACTTGATCGTGATTACCTCAAAGAGTTGAATTGTTGTGAAGGACTCTTTATCCAAGGTCATTACTATCCCCCATGTCCTGAACCTGAATTAACAATGGGCACTTCCAAACATACTGATAGTAGCTTCATAACATTACTTCTACAAGATCAACTTGGTGGTCTTCAAGTTCTTCATGAGGATAGATGGGTCAATGTTCCTCCTATACATGGAGCTCTTGTGGTAAACGTAGGAGATCTTCTACAG
Protein sequence

>MS.gene47791.t1

MVVKNTNQLEESTNSTYDRKTEVKAFDDSKAGVKGLVESGVSKIPRIFHTSKLDIGENSTSDSKLSIPIIDLKDIHIDQARREEVIDQIQSACHVGGFFQVINHNISIDVLDEMIHGIRSFHEQDVDVRKEFYTRDLKKKVMYFSNGTLFSGQAANWRDTIGFAVAPHPFKQEQLPSICRDSVIKYSQKIRDLGFIIFELLSEALGLDRDYLKELNCCEGLFIQGHYYPPCPEPELTMGTSKHTDSSFITLLLQDQLGGLQVLHEDRWVNVPPIHGALVVNVGDLLQ