Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48411.t1 | XP_003602912.1 | 84.6 | 441 | 10 | 3 | 52 | 456 | 99 | 517 | 3.30E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48411.t1 | Q7Y030 | 64.5 | 440 | 98 | 3 | 52 | 455 | 100 | 517 | 1.3e-156 | 554.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48411.t1 | G7J538 | 84.6 | 441 | 10 | 3 | 52 | 456 | 99 | 517 | 2.4e-204 | 721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052156 | MS.gene48411 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene059154 | MS.gene48411 | 0.815593 | 8.54E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCATTCAGCTTGTGATTT+TGG | 0.068002 | 3.2:+83484947 | MS.gene48411:CDS |
| CAGACCAAACATGGCACTTT+TGG | 0.192496 | 3.2:+83485718 | MS.gene48411:CDS |
| TTGCACTCACAAGGTGAATT+TGG | 0.192542 | 3.2:-83481892 | None:intergenic |
| GCAAAACCTAAATGCATTTC+AGG | 0.205325 | 3.2:-83482885 | None:intergenic |
| GTTCCACACGTTAAGGAATT+AGG | 0.206831 | 3.2:+83484117 | MS.gene48411:CDS |
| AATATAACCCCGAGACTTTC+GGG | 0.223726 | 3.2:-83482021 | None:intergenic |
| GGATTGCTTCTAGCTGCTTT+GGG | 0.237021 | 3.2:+83485103 | MS.gene48411:CDS |
| TCAACTCTTCATCATTGAAT+TGG | 0.253038 | 3.2:-83485042 | None:intergenic |
| TTGCTGTTTCCCAAGCTTAT+CGG | 0.280991 | 3.2:-83484217 | None:intergenic |
| TGGATTGCTTCTAGCTGCTT+TGG | 0.294168 | 3.2:+83485102 | MS.gene48411:CDS |
| CATCTTCATTTCGGCTTCTC+CGG | 0.300796 | 3.2:+83485494 | MS.gene48411:CDS |
| GAATATAACCCCGAGACTTT+CGG | 0.301350 | 3.2:-83482022 | None:intergenic |
| CTAAATACCGGCAGGTGATT+TGG | 0.320489 | 3.2:+83484999 | MS.gene48411:CDS |
| CAACTCTTCATCATTGAATT+GGG | 0.327093 | 3.2:-83485041 | None:intergenic |
| GAGACAATGGCCAAAGTTAA+TGG | 0.337935 | 3.2:+83485420 | MS.gene48411:CDS |
| GCACAGCGACATCTTCATTT+CGG | 0.365352 | 3.2:+83485485 | MS.gene48411:CDS |
| CAGCGCTGCCCGAAAGTCTC+GGG | 0.384168 | 3.2:+83482013 | MS.gene48411:intron |
| AGAAGCAATCCAATCTCTTC+GGG | 0.388321 | 3.2:-83485091 | None:intergenic |
| AGCTTCCTGGTGAGTACTCT+TGG | 0.391715 | 3.2:+83482703 | MS.gene48411:CDS |
| GAACTTTGTTCCACACGTTA+AGG | 0.393106 | 3.2:+83484110 | MS.gene48411:CDS |
| CGGTACAAGGTTTCCATCCT+TGG | 0.393966 | 3.2:-83481864 | None:intergenic |
| TTTCAGCGTGCGGTTCTTGA+TGG | 0.397111 | 3.2:+83485779 | MS.gene48411:CDS |
| ACCAAAATCACAAGCTGAAT+GGG | 0.400153 | 3.2:-83484948 | None:intergenic |
| TGATGAAGAGTTGAGAAATC+AGG | 0.404730 | 3.2:+83485051 | MS.gene48411:CDS |
| GTATACAGAAAATGTATTGC+CGG | 0.409053 | 3.2:+83482803 | MS.gene48411:CDS |
| CGATGCCTTTCCATTAACTT+TGG | 0.411811 | 3.2:-83485430 | None:intergenic |
| AGGGAACCTGGCAGAATTTG+AGG | 0.418440 | 3.2:-83482853 | None:intergenic |
| CACCAAAATCACAAGCTGAA+TGG | 0.427593 | 3.2:-83484949 | None:intergenic |
| TAGAAGCAATCCAATCTCTT+CGG | 0.438821 | 3.2:-83485092 | None:intergenic |
| TTCACATACCTCTGAAGAAC+CGG | 0.439622 | 3.2:-83482822 | None:intergenic |
| ATCTTCATTTCGGCTTCTCC+GGG | 0.439681 | 3.2:+83485495 | MS.gene48411:CDS |
| CCAAGCTTATCGGCTTCCTC+TGG | 0.444477 | 3.2:-83484207 | None:intergenic |
| CATCCAGCGTCTCCGTTGTA+AGG | 0.448928 | 3.2:+83484071 | MS.gene48411:CDS |
| GCAGCGCTGCCCGAAAGTCT+CGG | 0.455418 | 3.2:+83482012 | MS.gene48411:intron |
| CCACTGACTCCCGAAGAGAT+TGG | 0.458973 | 3.2:+83485082 | MS.gene48411:CDS |
| AATGTGACGTGTCTAGGTTT+AGG | 0.460189 | 3.2:-83481603 | None:intergenic |
| CTCCCTTGGCTTACCAAGGA+TGG | 0.461393 | 3.2:+83481851 | MS.gene48411:CDS |
| TCTATAGTGAAAGAGCTTCC+TGG | 0.462447 | 3.2:+83482690 | MS.gene48411:CDS |
| GAATTTGGAGGCACGGTACA+AGG | 0.465090 | 3.2:-83481877 | None:intergenic |
| TGGCCCAAAAGTGCCATGTT+TGG | 0.467421 | 3.2:-83485722 | None:intergenic |
| AAACCATCTGTGGTCTCCCT+TGG | 0.468964 | 3.2:+83481837 | MS.gene48411:CDS |
| AATAGTCATTTGATTCTGCT+TGG | 0.470389 | 3.2:-83484182 | None:intergenic |
| CAATCTGCGGTAGCATGAAC+TGG | 0.471934 | 3.2:-83482780 | None:intergenic |
| CCAGAGGAAGCCGATAAGCT+TGG | 0.472576 | 3.2:+83484207 | MS.gene48411:CDS |
| AGGTTTATGGTGGAAAAGCT+AGG | 0.473316 | 3.2:+83485337 | MS.gene48411:intron |
| CACTCACAAGGTGAATTTGG+AGG | 0.474199 | 3.2:-83481889 | None:intergenic |
| TGCTCTTATTCTGAAATAGC+TGG | 0.476445 | 3.2:-83485742 | None:intergenic |
| CTACACATGCAATCAGGAGC+AGG | 0.479880 | 3.2:-83485863 | None:intergenic |
| GGATTGAACCAGCAGAAGAT+GGG | 0.480227 | 3.2:+83482062 | MS.gene48411:CDS |
| CAGAGGAAGCCGATAAGCTT+GGG | 0.483277 | 3.2:+83484208 | MS.gene48411:CDS |
| CAAAACCTAAATGCATTTCA+GGG | 0.484763 | 3.2:-83482884 | None:intergenic |
| ATACCGGCAGGTGATTTGGC+AGG | 0.495911 | 3.2:+83485003 | MS.gene48411:CDS |
| TCTCATCGCTTGACATTCAA+CGG | 0.499133 | 3.2:+83484036 | MS.gene48411:CDS |
| AGGATTGAACCAGCAGAAGA+TGG | 0.499974 | 3.2:+83482061 | MS.gene48411:CDS |
| TTATGGTGGAAAAGCTAGGT+TGG | 0.500381 | 3.2:+83485341 | MS.gene48411:CDS |
| TGTAGCAATGTGACGTGTCT+AGG | 0.506331 | 3.2:-83481609 | None:intergenic |
| TAAGCTCTACACATGCAATC+AGG | 0.507747 | 3.2:-83485869 | None:intergenic |
| TAGACACGTCACATTGCTAC+AGG | 0.507958 | 3.2:+83481611 | MS.gene48411:CDS |
| GGGCAATATGCACAATGCTC+TGG | 0.515544 | 3.2:+83485515 | MS.gene48411:CDS |
| AGCTTGGGAAACAGCAAAGC+GGG | 0.516102 | 3.2:+83484223 | MS.gene48411:CDS |
| GGGACAGATAAGATTAAGAA+AGG | 0.523765 | 3.2:+83485817 | MS.gene48411:CDS |
| ACTTAACCTCAAATTCTGCC+AGG | 0.524499 | 3.2:+83482847 | MS.gene48411:CDS |
| AGCTGGGCAATAAACCTTGT+GGG | 0.537721 | 3.2:-83485158 | None:intergenic |
| TGCTCTAGCTAAATACCGGC+AGG | 0.538557 | 3.2:+83484991 | MS.gene48411:CDS |
| AACTTGCTCTAGCTAAATAC+CGG | 0.541940 | 3.2:+83484987 | MS.gene48411:CDS |
| GATGAAGAGTTGAGAAATCA+GGG | 0.542902 | 3.2:+83485052 | MS.gene48411:CDS |
| TTCCCTGCCAAATCACCTGC+CGG | 0.544202 | 3.2:-83485006 | None:intergenic |
| GATTGCTTCTAGCTGCTTTG+GGG | 0.545630 | 3.2:+83485104 | MS.gene48411:CDS |
| TTTCCATCCTTGGTAAGCCA+AGG | 0.550395 | 3.2:-83481854 | None:intergenic |
| CCAATCTCTTCGGGAGTCAG+TGG | 0.550645 | 3.2:-83485082 | None:intergenic |
| CGATGAGAGAACGGTTGCAA+TGG | 0.551497 | 3.2:-83484021 | None:intergenic |
| TGGTCTCCCTTGGCTTACCA+AGG | 0.559168 | 3.2:+83481847 | MS.gene48411:CDS |
| AGAGCATTGTGCATATTGCC+CGG | 0.559884 | 3.2:-83485513 | None:intergenic |
| GTGCTCCAAGAGTACTCACC+AGG | 0.562409 | 3.2:-83482708 | None:intergenic |
| CAGTTCATGCTACCGCAGAT+TGG | 0.569656 | 3.2:+83482781 | MS.gene48411:CDS |
| TGATGGACATAAGAACAGAC+AGG | 0.569668 | 3.2:+83485796 | MS.gene48411:CDS |
| GATTGAACCAGCAGAAGATG+GGG | 0.572133 | 3.2:+83482063 | MS.gene48411:CDS |
| TGACCTTACAACGGAGACGC+TGG | 0.575199 | 3.2:-83484074 | None:intergenic |
| TTCCATCCTTGGTAAGCCAA+GGG | 0.578859 | 3.2:-83481853 | None:intergenic |
| GCTGGTTCAATCCTCCATCA+AGG | 0.585087 | 3.2:-83482052 | None:intergenic |
| ATGTATTGCCGGTTCTTCAG+AGG | 0.591620 | 3.2:+83482814 | MS.gene48411:CDS |
| TCTAGTCTCTGCAGAGACAA+TGG | 0.592187 | 3.2:+83485407 | MS.gene48411:CDS |
| CGGAGACGCTGGATGTCTGA+TGG | 0.599897 | 3.2:-83484063 | None:intergenic |
| ACAAGAGAGTACTATGCCAC+AGG | 0.599956 | 3.2:+83482729 | MS.gene48411:CDS |
| TTCAGAATAAGAGCATAGGC+TGG | 0.602241 | 3.2:+83485750 | MS.gene48411:CDS |
| GAAGACTATCAGACCAAACA+TGG | 0.603497 | 3.2:+83485709 | MS.gene48411:CDS |
| TCTCCTAATTCCTTAACGTG+TGG | 0.606004 | 3.2:-83484120 | None:intergenic |
| AATGTCAAGCGATGAGAGAA+CGG | 0.606541 | 3.2:-83484030 | None:intergenic |
| TACCGGCAGGTGATTTGGCA+GGG | 0.608982 | 3.2:+83485004 | MS.gene48411:CDS |
| CTATTTCAGAATAAGAGCAT+AGG | 0.610443 | 3.2:+83485746 | MS.gene48411:CDS |
| CTGGTCAGAATTTCAGCGTG+CGG | 0.613267 | 3.2:+83485769 | MS.gene48411:CDS |
| TGTAGCGAAGACGCTGAACA+AGG | 0.614908 | 3.2:-83484146 | None:intergenic |
| ACTTTATCTTGCTTCCCACA+AGG | 0.615688 | 3.2:+83485144 | MS.gene48411:CDS |
| AAGCCAAGGGAGACCACAGA+TGG | 0.622244 | 3.2:-83481840 | None:intergenic |
| CAATCTCTTCGGGAGTCAGT+GGG | 0.624514 | 3.2:-83485081 | None:intergenic |
| AATGGCCAAAGTTAATGGAA+AGG | 0.628911 | 3.2:+83485425 | MS.gene48411:CDS |
| ACAAGGTGAATTTGGAGGCA+CGG | 0.632017 | 3.2:-83481884 | None:intergenic |
| TACACATGCAATCAGGAGCA+GGG | 0.643795 | 3.2:-83485862 | None:intergenic |
| AGCGCTGCCCGAAAGTCTCG+GGG | 0.648196 | 3.2:+83482014 | MS.gene48411:intron |
| TCTAGTAGCTCTAATGCCTG+TGG | 0.656159 | 3.2:-83482745 | None:intergenic |
| ATTGAACCAGCAGAAGATGG+GGG | 0.660277 | 3.2:+83482064 | MS.gene48411:CDS |
| TCACTATAGATACTTCGTCA+CGG | 0.662049 | 3.2:-83482677 | None:intergenic |
| AAAACCTAAATGCATTTCAG+GGG | 0.663232 | 3.2:-83482883 | None:intergenic |
| ATCAAATGACTATTTGCCAG+AGG | 0.666329 | 3.2:+83484191 | MS.gene48411:CDS |
| TTGAACCAGCAGAAGATGGG+GGG | 0.672923 | 3.2:+83482065 | MS.gene48411:CDS |
| AAACCTAAATGCATTTCAGG+GGG | 0.673448 | 3.2:-83482882 | None:intergenic |
| AGACACGTCACATTGCTACA+GGG | 0.677204 | 3.2:+83481612 | MS.gene48411:CDS |
| GTTGAAGTACAAACCATCTG+TGG | 0.683252 | 3.2:+83481827 | MS.gene48411:CDS |
| CTTCAAAGTTGACCTTACAA+CGG | 0.697428 | 3.2:-83484083 | None:intergenic |
| GATGGACATAAGAACAGACA+GGG | 0.720717 | 3.2:+83485797 | MS.gene48411:CDS |
| ATGAAGAGTTGAGAAATCAG+GGG | 0.726296 | 3.2:+83485053 | MS.gene48411:CDS |
| AAGCTTGGGAAACAGCAAAG+CGG | 0.733658 | 3.2:+83484222 | MS.gene48411:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAATTGAAAAATTAT+TGG | - | chr3.2:83484484-83484503 | None:intergenic | 10.0% |
| !!! | TAAATTGTCATTTATATAAT+TGG | - | chr3.2:83484863-83484882 | None:intergenic | 10.0% |
| !!! | TATTTTTTCTATTAAAATTC+AGG | + | chr3.2:83481935-83481954 | MS.gene48411:intron | 10.0% |
| !! | ATAAAAAATTGAAGACATAA+AGG | - | chr3.2:83482576-83482595 | None:intergenic | 15.0% |
| !! | TAAAATTCTAAATATGCTTA+CGG | + | chr3.2:83483892-83483911 | MS.gene48411:intron | 15.0% |
| !! | TCTAAGAAAGAAAAATTATT+TGG | + | chr3.2:83483546-83483565 | MS.gene48411:intron | 15.0% |
| !! | TTTAGATAAAATAGAGTATA+AGG | - | chr3.2:83482258-83482277 | None:intergenic | 15.0% |
| !!! | ATCTTTTAAATAGAAAATGT+GGG | - | chr3.2:83482439-83482458 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTTCAGAAAATTA+AGG | + | chr3.2:83484882-83484901 | MS.gene48411:intron | 15.0% |
| !!! | TATCTTTTAAATAGAAAATG+TGG | - | chr3.2:83482440-83482459 | None:intergenic | 15.0% |
| !!! | TATTATTTATATAGCTTGTT+TGG | - | chr3.2:83483307-83483326 | None:intergenic | 15.0% |
| !!! | TATTTTCAGTTATTTTCTAT+AGG | - | chr3.2:83483227-83483246 | None:intergenic | 15.0% |
| !! | AAAACCTACAAATTATATCA+TGG | - | chr3.2:83482971-83482990 | None:intergenic | 20.0% |
| !! | AAAGGTAATTAATACTTCAT+TGG | - | chr3.2:83482221-83482240 | None:intergenic | 20.0% |
| !! | AAATAACAACTCAGTATAAA+TGG | - | chr3.2:83482604-83482623 | None:intergenic | 20.0% |
| !! | ACAGTTTAAGAAAAAATTCT+GGG | + | chr3.2:83483089-83483108 | MS.gene48411:intron | 20.0% |
| !! | AGTTGTTAGATTGAAAAATA+TGG | - | chr3.2:83483400-83483419 | None:intergenic | 20.0% |
| !! | ATTAAAATAACACATACGAT+CGG | - | chr3.2:83481725-83481744 | None:intergenic | 20.0% |
| !! | ATTTATATAATTGGATCACA+AGG | - | chr3.2:83484854-83484873 | None:intergenic | 20.0% |
| !! | TAATCCATTGGAAAAAAATA+AGG | + | chr3.2:83483064-83483083 | MS.gene48411:intron | 20.0% |
| !! | TGATAACAAACAAAGAAAAT+AGG | - | chr3.2:83483477-83483496 | None:intergenic | 20.0% |
| !! | TGATTAGAATATGTCTTTAA+AGG | - | chr3.2:83482398-83482417 | None:intergenic | 20.0% |
| !! | TGTGATATTTATAAGAATGA+AGG | - | chr3.2:83483848-83483867 | None:intergenic | 20.0% |
| !! | TTAGATTGAAAAATATGGAT+GGG | - | chr3.2:83483395-83483414 | None:intergenic | 20.0% |
| !!! | AAAAGATGTTTGGTTTTAAA+CGG | - | chr3.2:83485653-83485672 | None:intergenic | 20.0% |
| !!! | ATTCTATGTTTTTAGGTTTA+TGG | + | chr3.2:83485324-83485343 | MS.gene48411:intron | 20.0% |
| !!! | ATTTCCATGATATAATTTGT+AGG | + | chr3.2:83482964-83482983 | MS.gene48411:intron | 20.0% |
| !!! | CAACACAATTTTCTATATAA+TGG | - | chr3.2:83482910-83482929 | None:intergenic | 20.0% |
| !!! | TATGTGCAATTTTTTGTTTT+AGG | + | chr3.2:83483634-83483653 | MS.gene48411:intron | 20.0% |
| ! | AATCTACAACATTTGAAAAC+AGG | - | chr3.2:83483972-83483991 | None:intergenic | 25.0% |
| ! | AATTTCATTGCAGAAATGAA+GGG | + | chr3.2:83482117-83482136 | MS.gene48411:intron | 25.0% |
| ! | ACTTGTCTTTCTAATTTACT+TGG | + | chr3.2:83484327-83484346 | MS.gene48411:intron | 25.0% |
| ! | AGTAAATGAGATTGTTTGAA+AGG | + | chr3.2:83482090-83482109 | MS.gene48411:intron | 25.0% |
| ! | ATTATTGTCTCATAATCCAT+TGG | + | chr3.2:83483052-83483071 | MS.gene48411:intron | 25.0% |
| ! | CGTAAATAATGCATATCTAA+AGG | - | chr3.2:83483943-83483962 | None:intergenic | 25.0% |
| ! | CTAAAATTTGAATGTAACGT+TGG | + | chr3.2:83482479-83482498 | MS.gene48411:intron | 25.0% |
| ! | CTATTTGAGTCAATAAACTA+TGG | - | chr3.2:83483504-83483523 | None:intergenic | 25.0% |
| ! | GACAGTTTAAGAAAAAATTC+TGG | + | chr3.2:83483088-83483107 | MS.gene48411:intron | 25.0% |
| ! | GATTATGAGACAATAATTGA+TGG | - | chr3.2:83483049-83483068 | None:intergenic | 25.0% |
| ! | GGGAAAAAAATTACAGTTTA+AGG | + | chr3.2:83483192-83483211 | MS.gene48411:intron | 25.0% |
| ! | GTAAATGAGATTGTTTGAAA+GGG | + | chr3.2:83482091-83482110 | MS.gene48411:intron | 25.0% |
| ! | GTTAGATTGAAAAATATGGA+TGG | - | chr3.2:83483396-83483415 | None:intergenic | 25.0% |
| ! | TAATTTCATTGCAGAAATGA+AGG | + | chr3.2:83482116-83482135 | MS.gene48411:intron | 25.0% |
| ! | TGTGATTACAGTATTATAAG+CGG | + | chr3.2:83484368-83484387 | MS.gene48411:intron | 25.0% |
| ! | TTTCTATTAACTGCAGTTTA+AGG | + | chr3.2:83484803-83484822 | MS.gene48411:intron | 25.0% |
| !! | ATGAGTTTAAAATTTGAACG+AGG | + | chr3.2:83484704-83484723 | MS.gene48411:intron | 25.0% |
| !! | ATTTTTCTTTCTTAGATCCT+AGG | - | chr3.2:83483542-83483561 | None:intergenic | 25.0% |
| !! | CTTTTCTTATCTTCCATAAA+AGG | - | chr3.2:83485387-83485406 | None:intergenic | 25.0% |
| !!! | AAAATTATTTGGTTCTTCCA+AGG | + | chr3.2:83483557-83483576 | MS.gene48411:intron | 25.0% |
| !!! | GGTTTTAAACGGTAAATTTT+GGG | - | chr3.2:83485642-83485661 | None:intergenic | 25.0% |
| !!! | GTCTGTTTTAAATACCTTTT+AGG | + | chr3.2:83484613-83484632 | MS.gene48411:intron | 25.0% |
| !!! | GTTTTAAACGGTAAATTTTG+GGG | - | chr3.2:83485641-83485660 | None:intergenic | 25.0% |
| !!! | TATATTCAAGTTTTCCTTGA+TGG | + | chr3.2:83482038-83482057 | MS.gene48411:CDS | 25.0% |
| !!! | TGGATTGATTCTATGTTTTT+AGG | + | chr3.2:83485317-83485336 | MS.gene48411:intron | 25.0% |
| !!! | TGGTTTTAAACGGTAAATTT+TGG | - | chr3.2:83485643-83485662 | None:intergenic | 25.0% |
| !!! | TGTTTTAATAACTCCACATA+TGG | + | chr3.2:83483777-83483796 | MS.gene48411:intron | 25.0% |
| AAAACCTAAATGCATTTCAG+GGG | - | chr3.2:83482886-83482905 | None:intergenic | 30.0% | |
| AACTATGTAAATTCCAACCT+TGG | - | chr3.2:83483609-83483628 | None:intergenic | 30.0% | |
| AAGGATATATCAGTGGAAAA+AGG | - | chr3.2:83482239-83482258 | None:intergenic | 30.0% | |
| AATAGTCATTTGATTCTGCT+TGG | - | chr3.2:83484185-83484204 | None:intergenic | 30.0% | |
| AATGCTTCCAATACAATTGA+CGG | + | chr3.2:83481750-83481769 | MS.gene48411:intron | 30.0% | |
| ACATGACACTTAATATGAGA+CGG | - | chr3.2:83482165-83482184 | None:intergenic | 30.0% | |
| ACTATGTAAATTCCAACCTT+GGG | - | chr3.2:83483608-83483627 | None:intergenic | 30.0% | |
| AGAGTATAAGGATATATCAG+TGG | - | chr3.2:83482246-83482265 | None:intergenic | 30.0% | |
| ATCATGGAAATCCATTGTAA+GGG | - | chr3.2:83482955-83482974 | None:intergenic | 30.0% | |
| ATTCAAGGTATATCTAGTGT+GGG | + | chr3.2:83482538-83482557 | MS.gene48411:intron | 30.0% | |
| CAAAACCTAAATGCATTTCA+GGG | - | chr3.2:83482887-83482906 | None:intergenic | 30.0% | |
| CAACTCTTCATCATTGAATT+GGG | - | chr3.2:83485044-83485063 | None:intergenic | 30.0% | |
| GCCAGGATTCAAAAAATTAT+GGG | + | chr3.2:83484302-83484321 | MS.gene48411:intron | 30.0% | |
| GTATACAGAAAATGTATTGC+CGG | + | chr3.2:83482803-83482822 | MS.gene48411:CDS | 30.0% | |
| GTTTAAGAAAAAATTCTGGG+TGG | + | chr3.2:83483092-83483111 | MS.gene48411:intron | 30.0% | |
| TATAACCAGAACTCTACAAT+AGG | - | chr3.2:83484739-83484758 | None:intergenic | 30.0% | |
| TATCATGGAAATCCATTGTA+AGG | - | chr3.2:83482956-83482975 | None:intergenic | 30.0% | |
| TCAACTCTTCATCATTGAAT+TGG | - | chr3.2:83485045-83485064 | None:intergenic | 30.0% | |
| TCTCATATTAAGTGTCATGT+TGG | + | chr3.2:83482165-83482184 | MS.gene48411:intron | 30.0% | |
| TGCCAGGATTCAAAAAATTA+TGG | + | chr3.2:83484301-83484320 | MS.gene48411:intron | 30.0% | |
| TTAAGGCTCCTGTTAATTAA+TGG | + | chr3.2:83484899-83484918 | MS.gene48411:intron | 30.0% | |
| ! | ATTGACTCAAATAGTTGTCA+GGG | + | chr3.2:83483510-83483529 | MS.gene48411:intron | 30.0% |
| ! | ATTTTCTGTATACCAATCTG+CGG | - | chr3.2:83482796-83482815 | None:intergenic | 30.0% |
| ! | CTATTTCAGAATAAGAGCAT+AGG | + | chr3.2:83485746-83485765 | MS.gene48411:CDS | 30.0% |
| ! | TTTTCTCGTTGATACAGTTA+TGG | + | chr3.2:83483990-83484009 | MS.gene48411:intron | 30.0% |
| !! | AAAAACAACACTGACTTGAT+TGG | - | chr3.2:83483170-83483189 | None:intergenic | 30.0% |
| !! | AAGCACGTTATTTCCTTTTA+TGG | + | chr3.2:83485371-83485390 | MS.gene48411:CDS | 30.0% |
| !! | GTTTACTTTTGAACTTAGTC+TGG | + | chr3.2:83485297-83485316 | MS.gene48411:intron | 30.0% |
| !! | TAAGCGGAATATAGTTTGTT+AGG | + | chr3.2:83484384-83484403 | MS.gene48411:intron | 30.0% |
| !! | TATTGACTCAAATAGTTGTC+AGG | + | chr3.2:83483509-83483528 | MS.gene48411:intron | 30.0% |
| !!! | ACCCATAATTTTTTGAATCC+TGG | - | chr3.2:83484306-83484325 | None:intergenic | 30.0% |
| !!! | CAAGTCAGTGTTGTTTTTTT+GGG | + | chr3.2:83483172-83483191 | MS.gene48411:intron | 30.0% |
| !!! | CTATGTTTTTAGGTTTATGG+TGG | + | chr3.2:83485327-83485346 | MS.gene48411:intron | 30.0% |
| !!! | GTCTCCTTATTTTTTTCCAA+TGG | - | chr3.2:83483071-83483090 | None:intergenic | 30.0% |
| !!! | TCAAGTCAGTGTTGTTTTTT+TGG | + | chr3.2:83483171-83483190 | MS.gene48411:intron | 30.0% |
| AAAACTTCCCACATAATCCT+TGG | - | chr3.2:83483577-83483596 | None:intergenic | 35.0% | |
| AAACCTAAATGCATTTCAGG+GGG | - | chr3.2:83482885-83482904 | None:intergenic | 35.0% | |
| AACAACTCAGTATAAATGGC+TGG | - | chr3.2:83482600-83482619 | None:intergenic | 35.0% | |
| AAGCTGTAGTTACACCTAAA+AGG | - | chr3.2:83484630-83484649 | None:intergenic | 35.0% | |
| AATATATCCTGTCATGAGCT+GGG | - | chr3.2:83485177-83485196 | None:intergenic | 35.0% | |
| AATGGCCAAAGTTAATGGAA+AGG | + | chr3.2:83485425-83485444 | MS.gene48411:CDS | 35.0% | |
| ACAGGATTCACTTCAAAATG+CGG | - | chr3.2:83482510-83482529 | None:intergenic | 35.0% | |
| ACCAAAATCACAAGCTGAAT+GGG | - | chr3.2:83484951-83484970 | None:intergenic | 35.0% | |
| AGTGTAATGTACTCACAGTT+CGG | - | chr3.2:83481650-83481669 | None:intergenic | 35.0% | |
| ATCAAATGACTATTTGCCAG+AGG | + | chr3.2:83484191-83484210 | MS.gene48411:CDS | 35.0% | |
| ATCTAAAGGAAGACACTAAG+TGG | - | chr3.2:83483929-83483948 | None:intergenic | 35.0% | |
| ATCTATTAAGACGATGCACT+AGG | + | chr3.2:83483124-83483143 | MS.gene48411:intron | 35.0% | |
| ATGAAGAGTTGAGAAATCAG+GGG | + | chr3.2:83485053-83485072 | MS.gene48411:CDS | 35.0% | |
| ATGACACTTAATATGAGACG+GGG | - | chr3.2:83482163-83482182 | None:intergenic | 35.0% | |
| CACTGATGCTTCTACATAAA+AGG | + | chr3.2:83484582-83484601 | MS.gene48411:intron | 35.0% | |
| CATGACACTTAATATGAGAC+GGG | - | chr3.2:83482164-83482183 | None:intergenic | 35.0% | |
| CTGAAGATGCAAAAGATGTT+TGG | - | chr3.2:83485663-83485682 | None:intergenic | 35.0% | |
| CTTCAAAGTTGACCTTACAA+CGG | - | chr3.2:83484086-83484105 | None:intergenic | 35.0% | |
| GATGAAGAGTTGAGAAATCA+GGG | + | chr3.2:83485052-83485071 | MS.gene48411:CDS | 35.0% | |
| GATTCAAGGTATATCTAGTG+TGG | + | chr3.2:83482537-83482556 | MS.gene48411:intron | 35.0% | |
| GCAAAACCTAAATGCATTTC+AGG | - | chr3.2:83482888-83482907 | None:intergenic | 35.0% | |
| GGGACAGATAAGATTAAGAA+AGG | + | chr3.2:83485817-83485836 | MS.gene48411:CDS | 35.0% | |
| GTCAGTGACCATTAATTAAC+AGG | - | chr3.2:83484910-83484929 | None:intergenic | 35.0% | |
| TACAGCACTACATTAGAACT+AGG | - | chr3.2:83483672-83483691 | None:intergenic | 35.0% | |
| TAGAAGCAATCCAATCTCTT+CGG | - | chr3.2:83485095-83485114 | None:intergenic | 35.0% | |
| TCACTATAGATACTTCGTCA+CGG | - | chr3.2:83482680-83482699 | None:intergenic | 35.0% | |
| TGAGTGCAAATCTGCATAAT+TGG | + | chr3.2:83481906-83481925 | MS.gene48411:intron | 35.0% | |
| TGATGAAGAGTTGAGAAATC+AGG | + | chr3.2:83485051-83485070 | MS.gene48411:CDS | 35.0% | |
| TTGACTCAAATAGTTGTCAG+GGG | + | chr3.2:83483511-83483530 | MS.gene48411:intron | 35.0% | |
| TTGTACACCGTCAATTGTAT+TGG | - | chr3.2:83481760-83481779 | None:intergenic | 35.0% | |
| ! | AACTTGCTCTAGCTAAATAC+CGG | + | chr3.2:83484987-83485006 | MS.gene48411:CDS | 35.0% |
| ! | ACAAAGGTATAATACTGTGC+TGG | - | chr3.2:83483336-83483355 | None:intergenic | 35.0% |
| ! | CAAACATCTTTTGCATCTTC+AGG | + | chr3.2:83485661-83485680 | MS.gene48411:intron | 35.0% |
| !! | ATTCAAGTTTTCCTTGATGG+AGG | + | chr3.2:83482041-83482060 | MS.gene48411:CDS | 35.0% |
| !! | ATTCAGCTTGTGATTTTGGT+GGG | + | chr3.2:83484951-83484970 | MS.gene48411:CDS | 35.0% |
| !! | TGCTCTTATTCTGAAATAGC+TGG | - | chr3.2:83485745-83485764 | None:intergenic | 35.0% |
| !!! | AGGACTGTTTTGTTTGTCAT+TGG | + | chr3.2:83481955-83481974 | MS.gene48411:intron | 35.0% |
| !!! | ATTTTGAAGTGAATCCTGTC+TGG | + | chr3.2:83482511-83482530 | MS.gene48411:intron | 35.0% |
| !!! | CTTTTATGTAGAAGCATCAG+TGG | - | chr3.2:83484584-83484603 | None:intergenic | 35.0% |
| AACCAGAACTCTACAATAGG+AGG | - | chr3.2:83484736-83484755 | None:intergenic | 40.0% | |
| AATATAACCCCGAGACTTTC+GGG | - | chr3.2:83482024-83482043 | None:intergenic | 40.0% | |
| AATGTCAAGCGATGAGAGAA+CGG | - | chr3.2:83484033-83484052 | None:intergenic | 40.0% | |
| AATGTGACGTGTCTAGGTTT+AGG | - | chr3.2:83481606-83481625 | None:intergenic | 40.0% | |
| ACCTTCCCTAAATACTGCAA+TGG | - | chr3.2:83483704-83483723 | None:intergenic | 40.0% | |
| ACTTAACCTCAAATTCTGCC+AGG | + | chr3.2:83482847-83482866 | MS.gene48411:CDS | 40.0% | |
| ACTTTATCTTGCTTCCCACA+AGG | + | chr3.2:83485144-83485163 | MS.gene48411:CDS | 40.0% | |
| AGAAGCAATCCAATCTCTTC+GGG | - | chr3.2:83485094-83485113 | None:intergenic | 40.0% | |
| ATAAGAATGAAGGTGAGCCT+TGG | - | chr3.2:83483838-83483857 | None:intergenic | 40.0% | |
| ATCCTCCTATTGTAGAGTTC+TGG | + | chr3.2:83484731-83484750 | MS.gene48411:intron | 40.0% | |
| CAATATATCCTGTCATGAGC+TGG | - | chr3.2:83485178-83485197 | None:intergenic | 40.0% | |
| CACCAAAATCACAAGCTGAA+TGG | - | chr3.2:83484952-83484971 | None:intergenic | 40.0% | |
| CAGCGCTGCAATAATCAAAA+GGG | - | chr3.2:83482001-83482020 | None:intergenic | 40.0% | |
| CAGGATTCACTTCAAAATGC+GGG | - | chr3.2:83482509-83482528 | None:intergenic | 40.0% | |
| CGATGCCTTTCCATTAACTT+TGG | - | chr3.2:83485433-83485452 | None:intergenic | 40.0% | |
| CTCTTAGTGAACTTCCAAGT+AGG | + | chr3.2:83483428-83483447 | MS.gene48411:intron | 40.0% | |
| GAACTTTGTTCCACACGTTA+AGG | + | chr3.2:83484110-83484129 | MS.gene48411:CDS | 40.0% | |
| GAAGACTATCAGACCAAACA+TGG | + | chr3.2:83485709-83485728 | MS.gene48411:CDS | 40.0% | |
| GAATATAACCCCGAGACTTT+CGG | - | chr3.2:83482025-83482044 | None:intergenic | 40.0% | |
| GAGACAATGGCCAAAGTTAA+TGG | + | chr3.2:83485420-83485439 | MS.gene48411:CDS | 40.0% | |
| GATGGACATAAGAACAGACA+GGG | + | chr3.2:83485797-83485816 | MS.gene48411:CDS | 40.0% | |
| GCCTTCCATTGCAGTATTTA+GGG | + | chr3.2:83483696-83483715 | MS.gene48411:intron | 40.0% | |
| GCTAATACATTCACACACAC+AGG | - | chr3.2:83484676-83484695 | None:intergenic | 40.0% | |
| GGTTCTTCCAAGGATTATGT+GGG | + | chr3.2:83483567-83483586 | MS.gene48411:intron | 40.0% | |
| GTTCCACACGTTAAGGAATT+AGG | + | chr3.2:83484117-83484136 | MS.gene48411:CDS | 40.0% | |
| GTTGAAGTACAAACCATCTG+TGG | + | chr3.2:83481827-83481846 | MS.gene48411:CDS | 40.0% | |
| TAAGCTCTACACATGCAATC+AGG | - | chr3.2:83485872-83485891 | None:intergenic | 40.0% | |
| TAGGTGTAACTACAGCTTGA+AGG | + | chr3.2:83484632-83484651 | MS.gene48411:intron | 40.0% | |
| TATGCAGATTTGCACTCACA+AGG | - | chr3.2:83481904-83481923 | None:intergenic | 40.0% | |
| TCCATTGCAGTATTTAGGGA+AGG | + | chr3.2:83483700-83483719 | MS.gene48411:intron | 40.0% | |
| TCCCTAAATACTGCAATGGA+AGG | - | chr3.2:83483700-83483719 | None:intergenic | 40.0% | |
| TCTATAGTGAAAGAGCTTCC+TGG | + | chr3.2:83482690-83482709 | MS.gene48411:CDS | 40.0% | |
| TCTCATCGCTTGACATTCAA+CGG | + | chr3.2:83484036-83484055 | MS.gene48411:CDS | 40.0% | |
| TCTCCTAATTCCTTAACGTG+TGG | - | chr3.2:83484123-83484142 | None:intergenic | 40.0% | |
| TGATTGCATGTGTAGAGCTT+AGG | + | chr3.2:83485871-83485890 | MS.gene48411:CDS | 40.0% | |
| TGCCTTCCATTGCAGTATTT+AGG | + | chr3.2:83483695-83483714 | MS.gene48411:intron | 40.0% | |
| TGGTTCTTCCAAGGATTATG+TGG | + | chr3.2:83483566-83483585 | MS.gene48411:intron | 40.0% | |
| TGTATTGCTGCAAGACATGT+AGG | + | chr3.2:83485611-83485630 | MS.gene48411:intron | 40.0% | |
| TTAGGCAACAACTTGCATGT+TGG | + | chr3.2:83484402-83484421 | MS.gene48411:intron | 40.0% | |
| TTGCACTCACAAGGTGAATT+TGG | - | chr3.2:83481895-83481914 | None:intergenic | 40.0% | |
| TTGCAGTATTTAGGGAAGGT+TGG | + | chr3.2:83483704-83483723 | MS.gene48411:intron | 40.0% | |
| TTTCCCCCTGAAATGCATTT+AGG | + | chr3.2:83482879-83482898 | MS.gene48411:CDS | 40.0% | |
| TTTGCAACTAGCCCTTACAA+TGG | + | chr3.2:83482941-83482960 | MS.gene48411:intron | 40.0% | |
| ! | AACAGTCTTTTGCAGATGTG+AGG | - | chr3.2:83483761-83483780 | None:intergenic | 40.0% |
| ! | ACATCTTTTGCATCTTCAGG+TGG | + | chr3.2:83485664-83485683 | MS.gene48411:intron | 40.0% |
| ! | AGACCAAACATGGCACTTTT+GGG | + | chr3.2:83485719-83485738 | MS.gene48411:CDS | 40.0% |
| ! | AGGTTTATGGTGGAAAAGCT+AGG | + | chr3.2:83485337-83485356 | MS.gene48411:intron | 40.0% |
| ! | CATTCAGCTTGTGATTTTGG+TGG | + | chr3.2:83484950-83484969 | MS.gene48411:CDS | 40.0% |
| ! | GTCTTCATTTGCATTTTGCC+AGG | + | chr3.2:83484285-83484304 | MS.gene48411:intron | 40.0% |
| ! | TGATGGACATAAGAACAGAC+AGG | + | chr3.2:83485796-83485815 | MS.gene48411:CDS | 40.0% |
| ! | TTATGGTGGAAAAGCTAGGT+TGG | + | chr3.2:83485341-83485360 | MS.gene48411:CDS | 40.0% |
| ! | TTCACATACCTCTGAAGAAC+CGG | - | chr3.2:83482825-83482844 | None:intergenic | 40.0% |
| ! | TTCAGAATAAGAGCATAGGC+TGG | + | chr3.2:83485750-83485769 | MS.gene48411:CDS | 40.0% |
| !! | TTCAGCTTGTGATTTTGGTG+GGG | + | chr3.2:83484952-83484971 | MS.gene48411:CDS | 40.0% |
| !! | TTGCTGTTTCCCAAGCTTAT+CGG | - | chr3.2:83484220-83484239 | None:intergenic | 40.0% |
| AAGCTTGGGAAACAGCAAAG+CGG | + | chr3.2:83484222-83484241 | MS.gene48411:CDS | 45.0% | |
| AATATGGATGGGTGACGTGA+CGG | - | chr3.2:83483384-83483403 | None:intergenic | 45.0% | |
| ACAAGGTGAATTTGGAGGCA+CGG | - | chr3.2:83481887-83481906 | None:intergenic | 45.0% | |
| AGACACGTCACATTGCTACA+GGG | + | chr3.2:83481612-83481631 | MS.gene48411:CDS | 45.0% | |
| AGCTGGGCAATAAACCTTGT+GGG | - | chr3.2:83485161-83485180 | None:intergenic | 45.0% | |
| AGGATTGAACCAGCAGAAGA+TGG | + | chr3.2:83482061-83482080 | MS.gene48411:CDS | 45.0% | |
| AGTTGTCAGGGGATATACCT+AGG | + | chr3.2:83483522-83483541 | MS.gene48411:intron | 45.0% | |
| ATCCTGTCTGGCAAGATTCA+AGG | + | chr3.2:83482523-83482542 | MS.gene48411:intron | 45.0% | |
| ATCTTCATTTCGGCTTCTCC+GGG | + | chr3.2:83485495-83485514 | MS.gene48411:CDS | 45.0% | |
| ATTGAACCAGCAGAAGATGG+GGG | + | chr3.2:83482064-83482083 | MS.gene48411:CDS | 45.0% | |
| CACTCACAAGGTGAATTTGG+AGG | - | chr3.2:83481892-83481911 | None:intergenic | 45.0% | |
| CATCTTCATTTCGGCTTCTC+CGG | + | chr3.2:83485494-83485513 | MS.gene48411:CDS | 45.0% | |
| CTAAATACCGGCAGGTGATT+TGG | + | chr3.2:83484999-83485018 | MS.gene48411:CDS | 45.0% | |
| GATTGAACCAGCAGAAGATG+GGG | + | chr3.2:83482063-83482082 | MS.gene48411:CDS | 45.0% | |
| GCACAGCGACATCTTCATTT+CGG | + | chr3.2:83485485-83485504 | MS.gene48411:CDS | 45.0% | |
| GCAGCGCTGCAATAATCAAA+AGG | - | chr3.2:83482002-83482021 | None:intergenic | 45.0% | |
| GCATTTCAGGGGGAAAATGA+GGG | - | chr3.2:83482875-83482894 | None:intergenic | 45.0% | |
| GGAAGACACTAAGTGGCTTA+TGG | - | chr3.2:83483922-83483941 | None:intergenic | 45.0% | |
| GGATTGAACCAGCAGAAGAT+GGG | + | chr3.2:83482062-83482081 | MS.gene48411:CDS | 45.0% | |
| TAATGGTCACTGACATGTGC+AGG | + | chr3.2:83484916-83484935 | MS.gene48411:intron | 45.0% | |
| TACACATGCAATCAGGAGCA+GGG | - | chr3.2:83485865-83485884 | None:intergenic | 45.0% | |
| TACCTTGAATCTTGCCAGAC+AGG | - | chr3.2:83482528-83482547 | None:intergenic | 45.0% | |
| TAGACACGTCACATTGCTAC+AGG | + | chr3.2:83481611-83481630 | MS.gene48411:CDS | 45.0% | |
| TAGTGAACTTCCAAGTAGGC+AGG | + | chr3.2:83483432-83483451 | MS.gene48411:intron | 45.0% | |
| TCACTGACATGTGCAGGATA+TGG | + | chr3.2:83484922-83484941 | MS.gene48411:intron | 45.0% | |
| TCTAGTCTCTGCAGAGACAA+TGG | + | chr3.2:83485407-83485426 | MS.gene48411:CDS | 45.0% | |
| TGCATTTCAGGGGGAAAATG+AGG | - | chr3.2:83482876-83482895 | None:intergenic | 45.0% | |
| TGTAGCAATGTGACGTGTCT+AGG | - | chr3.2:83481612-83481631 | None:intergenic | 45.0% | |
| TTCCATCCTTGGTAAGCCAA+GGG | - | chr3.2:83481856-83481875 | None:intergenic | 45.0% | |
| TTTATTGCCCAGCTCATGAC+AGG | + | chr3.2:83485167-83485186 | MS.gene48411:intron | 45.0% | |
| TTTCCATCCTTGGTAAGCCA+AGG | - | chr3.2:83481857-83481876 | None:intergenic | 45.0% | |
| ! | CAGACCAAACATGGCACTTT+TGG | + | chr3.2:83485718-83485737 | MS.gene48411:CDS | 45.0% |
| ! | GAAGTTTTCTCACAGTCCCA+AGG | + | chr3.2:83483589-83483608 | MS.gene48411:intron | 45.0% |
| ! | GATTGCTTCTAGCTGCTTTG+GGG | + | chr3.2:83485104-83485123 | MS.gene48411:CDS | 45.0% |
| ! | GCCCATTCAGCTTGTGATTT+TGG | + | chr3.2:83484947-83484966 | MS.gene48411:CDS | 45.0% |
| ! | GGATTGCTTCTAGCTGCTTT+GGG | + | chr3.2:83485103-83485122 | MS.gene48411:CDS | 45.0% |
| ! | TGGATTGCTTCTAGCTGCTT+TGG | + | chr3.2:83485102-83485121 | MS.gene48411:CDS | 45.0% |
| ! | TTTTCTCACAGTCCCAAGGT+TGG | + | chr3.2:83483593-83483612 | MS.gene48411:intron | 45.0% |
| !! | ACAAAAAGTGCCTGCCTACT+TGG | - | chr3.2:83483445-83483464 | None:intergenic | 45.0% |
| !! | ACAAGAGAGTACTATGCCAC+AGG | + | chr3.2:83482729-83482748 | MS.gene48411:CDS | 45.0% |
| !! | AGAGCATTGTGCATATTGCC+CGG | - | chr3.2:83485516-83485535 | None:intergenic | 45.0% |
| !! | ATGTATTGCCGGTTCTTCAG+AGG | + | chr3.2:83482814-83482833 | MS.gene48411:CDS | 45.0% |
| !! | TCAGCTTGTGATTTTGGTGG+GGG | + | chr3.2:83484953-83484972 | MS.gene48411:CDS | 45.0% |
| !! | TCTAGTAGCTCTAATGCCTG+TGG | - | chr3.2:83482748-83482767 | None:intergenic | 45.0% |
| AAACCATCTGTGGTCTCCCT+TGG | + | chr3.2:83481837-83481856 | MS.gene48411:CDS | 50.0% | |
| AGCTTCCTGGTGAGTACTCT+TGG | + | chr3.2:83482703-83482722 | MS.gene48411:CDS | 50.0% | |
| AGCTTGGGAAACAGCAAAGC+GGG | + | chr3.2:83484223-83484242 | MS.gene48411:CDS | 50.0% | |
| AGGGAACCTGGCAGAATTTG+AGG | - | chr3.2:83482856-83482875 | None:intergenic | 50.0% | |
| CAATCTCTTCGGGAGTCAGT+GGG | - | chr3.2:83485084-83485103 | None:intergenic | 50.0% | |
| CAATCTGCGGTAGCATGAAC+TGG | - | chr3.2:83482783-83482802 | None:intergenic | 50.0% | |
| CAGAGGAAGCCGATAAGCTT+GGG | + | chr3.2:83484208-83484227 | MS.gene48411:CDS | 50.0% | |
| CAGTTCATGCTACCGCAGAT+TGG | + | chr3.2:83482781-83482800 | MS.gene48411:CDS | 50.0% | |
| CATATGGCCTCCTGATCACA+CGG | + | chr3.2:83483793-83483812 | MS.gene48411:intron | 50.0% | |
| CGATGAGAGAACGGTTGCAA+TGG | - | chr3.2:83484024-83484043 | None:intergenic | 50.0% | |
| CGGTACAAGGTTTCCATCCT+TGG | - | chr3.2:83481867-83481886 | None:intergenic | 50.0% | |
| CTACACATGCAATCAGGAGC+AGG | - | chr3.2:83485866-83485885 | None:intergenic | 50.0% | |
| CTGGTCAGAATTTCAGCGTG+CGG | + | chr3.2:83485769-83485788 | MS.gene48411:CDS | 50.0% | |
| GAGCTGGGCAATAAACCTTG+TGG | - | chr3.2:83485162-83485181 | None:intergenic | 50.0% | |
| GGGCAATATGCACAATGCTC+TGG | + | chr3.2:83485515-83485534 | MS.gene48411:CDS | 50.0% | |
| TGAGTTGCTACCGTGTGATC+AGG | - | chr3.2:83483806-83483825 | None:intergenic | 50.0% | |
| TGCTCTAGCTAAATACCGGC+AGG | + | chr3.2:83484991-83485010 | MS.gene48411:CDS | 50.0% | |
| TGTAGCGAAGACGCTGAACA+AGG | - | chr3.2:83484149-83484168 | None:intergenic | 50.0% | |
| TGTGATCAGGAGGCCATATG+TGG | - | chr3.2:83483793-83483812 | None:intergenic | 50.0% | |
| TTGAACCAGCAGAAGATGGG+GGG | + | chr3.2:83482065-83482084 | MS.gene48411:CDS | 50.0% | |
| TTTCAGCGTGCGGTTCTTGA+TGG | + | chr3.2:83485779-83485798 | MS.gene48411:CDS | 50.0% | |
| ! | GAATTTGGAGGCACGGTACA+AGG | - | chr3.2:83481880-83481899 | None:intergenic | 50.0% |
| ! | GCTGGTTCAATCCTCCATCA+AGG | - | chr3.2:83482055-83482074 | None:intergenic | 50.0% |
| !! | TGGCCCAAAAGTGCCATGTT+TGG | - | chr3.2:83485725-83485744 | None:intergenic | 50.0% |
| AAGCCAAGGGAGACCACAGA+TGG | - | chr3.2:83481843-83481862 | None:intergenic | 55.0% | |
| ACAGACTGACAGGTGGCAAG+TGG | - | chr3.2:83483361-83483380 | None:intergenic | 55.0% | |
| ACTTACCCCCCATCTTCTGC+TGG | - | chr3.2:83482073-83482092 | None:intergenic | 55.0% | |
| AGGGGGAAAATGAGGGAACC+TGG | - | chr3.2:83482868-83482887 | None:intergenic | 55.0% | |
| CAGGTGGCAAGTGGCAACAA+AGG | - | chr3.2:83483352-83483371 | None:intergenic | 55.0% | |
| CATCCAGCGTCTCCGTTGTA+AGG | + | chr3.2:83484071-83484090 | MS.gene48411:CDS | 55.0% | |
| CCAATCTCTTCGGGAGTCAG+TGG | - | chr3.2:83485085-83485104 | None:intergenic | 55.0% | |
| CCAGAGGAAGCCGATAAGCT+TGG | + | chr3.2:83484207-83484226 | MS.gene48411:CDS | 55.0% | |
| CTCCCTTGGCTTACCAAGGA+TGG | + | chr3.2:83481851-83481870 | MS.gene48411:CDS | 55.0% | |
| GCAACTCATTCATCGCGCCA+AGG | + | chr3.2:83483818-83483837 | MS.gene48411:intron | 55.0% | |
| GTTGCTACCGTGTGATCAGG+AGG | - | chr3.2:83483803-83483822 | None:intergenic | 55.0% | |
| TGACCTTACAACGGAGACGC+TGG | - | chr3.2:83484077-83484096 | None:intergenic | 55.0% | |
| TGGTCTCCCTTGGCTTACCA+AGG | + | chr3.2:83481847-83481866 | MS.gene48411:CDS | 55.0% | |
| TTCCCTGCCAAATCACCTGC+CGG | - | chr3.2:83485009-83485028 | None:intergenic | 55.0% | |
| ! | ATACCGGCAGGTGATTTGGC+AGG | + | chr3.2:83485003-83485022 | MS.gene48411:CDS | 55.0% |
| ! | TACCGGCAGGTGATTTGGCA+GGG | + | chr3.2:83485004-83485023 | MS.gene48411:CDS | 55.0% |
| !! | CCAAGCTTATCGGCTTCCTC+TGG | - | chr3.2:83484210-83484229 | None:intergenic | 55.0% |
| !! | CCACTGACTCCCGAAGAGAT+TGG | + | chr3.2:83485082-83485101 | MS.gene48411:CDS | 55.0% |
| !! | GTGCTCCAAGAGTACTCACC+AGG | - | chr3.2:83482711-83482730 | None:intergenic | 55.0% |
| CGGAGACGCTGGATGTCTGA+TGG | - | chr3.2:83484066-83484085 | None:intergenic | 60.0% | |
| !! | GACGTGACGGACAGACTGAC+AGG | - | chr3.2:83483371-83483390 | None:intergenic | 60.0% |
| !! | GTGACGGACAGACTGACAGG+TGG | - | chr3.2:83483368-83483387 | None:intergenic | 60.0% |
| AGCGCTGCCCGAAAGTCTCG+GGG | + | chr3.2:83482014-83482033 | MS.gene48411:intron | 65.0% | |
| CAGCGCTGCCCGAAAGTCTC+GGG | + | chr3.2:83482013-83482032 | MS.gene48411:intron | 65.0% | |
| GCAGCGCTGCCCGAAAGTCT+CGG | + | chr3.2:83482012-83482031 | MS.gene48411:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83481591 | 83485892 | 83481591 | ID=MS.gene48411 |
| chr3.2 | mRNA | 83481591 | 83485892 | 83481591 | ID=MS.gene48411.t1;Parent=MS.gene48411 |
| chr3.2 | exon | 83481591 | 83481653 | 83481591 | ID=MS.gene48411.t1.exon1;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83481591 | 83481653 | 83481591 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83481824 | 83481904 | 83481824 | ID=MS.gene48411.t1.exon2;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83481824 | 83481904 | 83481824 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83482016 | 83482090 | 83482016 | ID=MS.gene48411.t1.exon3;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83482016 | 83482090 | 83482016 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83482632 | 83482900 | 83482632 | ID=MS.gene48411.t1.exon4;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83482632 | 83482900 | 83482632 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83484007 | 83484254 | 83484007 | ID=MS.gene48411.t1.exon5;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83484007 | 83484254 | 83484007 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83484938 | 83485165 | 83484938 | ID=MS.gene48411.t1.exon6;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83484938 | 83485165 | 83484938 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83485339 | 83485536 | 83485339 | ID=MS.gene48411.t1.exon7;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83485339 | 83485536 | 83485339 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| chr3.2 | exon | 83485683 | 83485892 | 83485683 | ID=MS.gene48411.t1.exon8;Parent=MS.gene48411.t1 |
| chr3.2 | CDS | 83485683 | 83485892 | 83485683 | ID=cds.MS.gene48411.t1;Parent=MS.gene48411.t1 |
| Gene Sequence |
| Protein sequence |
