Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48847.t1 | XP_013455140.1 | 93.5 | 231 | 15 | 0 | 1 | 231 | 1 | 231 | 5.80E-117 | 430.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48847.t1 | B8DIJ5 | 32.3 | 133 | 83 | 3 | 68 | 196 | 4 | 133 | 1.8e-10 | 67.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48847.t1 | A0A072UJ99 | 93.5 | 231 | 15 | 0 | 1 | 231 | 1 | 231 | 4.2e-117 | 430.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053836 | MS.gene48847 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene48847 | 0.835841 | 1.33E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48847.t1 | MTR_4g027430 | 93.506 | 231 | 15 | 0 | 1 | 231 | 1 | 231 | 1.39e-163 | 451 |
| MS.gene48847.t1 | MTR_2g064690 | 86.047 | 129 | 16 | 1 | 105 | 231 | 1 | 129 | 1.99e-77 | 229 |
| MS.gene48847.t1 | MTR_2g064670 | 96.386 | 83 | 3 | 0 | 1 | 83 | 1 | 83 | 1.13e-53 | 167 |
| MS.gene48847.t1 | MTR_2g064700 | 85.870 | 92 | 5 | 1 | 1 | 92 | 1 | 84 | 9.40e-49 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48847.t1 | AT1G12244 | 62.441 | 213 | 77 | 3 | 17 | 226 | 31 | 243 | 2.38e-79 | 239 |
Find 47 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTAGTTCAAGATTCT+TGG | 0.213325 | 4.4:-74524007 | None:intergenic |
| GAAGCTGATGAGTTTATAAT+TGG | 0.233134 | 4.4:+74521783 | MS.gene48847:CDS |
| TTCTTCCTCCGAAGCGCGTT+TGG | 0.249873 | 4.4:-74518298 | None:intergenic |
| TGAGAAATAATCATCATCTT+TGG | 0.274796 | 4.4:-74524049 | None:intergenic |
| AGGCATCTTGTTTCTTCTGC+TGG | 0.280011 | 4.4:-74523598 | None:intergenic |
| GTATATCTACACGATGAATA+TGG | 0.323530 | 4.4:+74522947 | MS.gene48847:CDS |
| CCTTGTAGTTCAAGATTCTT+GGG | 0.350745 | 4.4:-74524006 | None:intergenic |
| GGCATCTTGTTTCTTCTGCT+GGG | 0.389860 | 4.4:-74523597 | None:intergenic |
| TTCTCTCTTGGTGTGGACTT+AGG | 0.392088 | 4.4:+74518343 | MS.gene48847:CDS |
| GAGAAATAATCATCATCTTT+GGG | 0.395248 | 4.4:-74524048 | None:intergenic |
| CTTCTGCGATGTTCATTATC+CGG | 0.402017 | 4.4:-74521658 | None:intergenic |
| AACTTCCTCCAAACGCGCTT+CGG | 0.404160 | 4.4:+74518290 | MS.gene48847:CDS |
| CATGTCGACCATTCGATCTA+TGG | 0.407762 | 4.4:-74522984 | None:intergenic |
| GAGAGATATTTCTCCACATC+AGG | 0.432417 | 4.4:+74523961 | MS.gene48847:CDS |
| TGGAGAGGTGGGTTCTCTCT+TGG | 0.437334 | 4.4:+74518331 | MS.gene48847:CDS |
| TCCTTTCCATCACAAGACTT+TGG | 0.469405 | 4.4:-74521810 | None:intergenic |
| AAGAGTTTCAAGGGTGGCAC+TGG | 0.486520 | 4.4:-74518175 | None:intergenic |
| GACTTAGGAATGGCTCGTAC+TGG | 0.490640 | 4.4:+74518358 | MS.gene48847:CDS |
| TATATCTACACGATGAATAT+GGG | 0.495994 | 4.4:+74522948 | MS.gene48847:CDS |
| AAATGAGTGGAAGAGTTTCA+AGG | 0.497687 | 4.4:-74518185 | None:intergenic |
| TTCCTCCGAAGCGCGTTTGG+AGG | 0.506216 | 4.4:-74518295 | None:intergenic |
| AAAGATGCAGAATGGAGAGG+TGG | 0.518239 | 4.4:+74518319 | MS.gene48847:CDS |
| TCTTGGTGTGGACTTAGGAA+TGG | 0.521326 | 4.4:+74518348 | MS.gene48847:CDS |
| TCCAAAGTCTTGTGATGGAA+AGG | 0.526441 | 4.4:+74521809 | MS.gene48847:CDS |
| GGACTTCCAAAGTCTTGTGA+TGG | 0.537166 | 4.4:+74521804 | MS.gene48847:CDS |
| AGGTGGGTTCTCTCTTGGTG+TGG | 0.539897 | 4.4:+74518336 | MS.gene48847:CDS |
| CCCAAGAATCTTGAACTACA+AGG | 0.541911 | 4.4:+74524006 | MS.gene48847:CDS |
| TACACTTACCATGGCAGCAT+AGG | 0.559395 | 4.4:-74523618 | None:intergenic |
| AATGAGTGGAAGAGTTTCAA+GGG | 0.564579 | 4.4:-74518184 | None:intergenic |
| TTCCTCCAAACGCGCTTCGG+AGG | 0.565039 | 4.4:+74518293 | MS.gene48847:CDS |
| GAGGACAGAAGCTTGAGGTC+CGG | 0.572920 | 4.4:+74521639 | MS.gene48847:CDS |
| ACTGGCATTGCTCTCAGCAA+AGG | 0.577358 | 4.4:+74518376 | MS.gene48847:CDS |
| GGAGGAAGAAAGATGCAGAA+TGG | 0.578101 | 4.4:+74518311 | MS.gene48847:CDS |
| ATCAGCCGCCATAGATCGAA+TGG | 0.579290 | 4.4:+74522976 | MS.gene48847:CDS |
| ACAAGATGCCTATGCTGCCA+TGG | 0.581302 | 4.4:+74523610 | MS.gene48847:CDS |
| ATTCTTTCAGGGGCTTGAGT+AGG | 0.582922 | 4.4:+74523573 | MS.gene48847:intron |
| AATGAACATCGCAGAAGAAG+AGG | 0.590370 | 4.4:+74521664 | MS.gene48847:CDS |
| AAGAAAGATGCAGAATGGAG+AGG | 0.598221 | 4.4:+74518316 | MS.gene48847:CDS |
| CTACAAGGAAAACTTAGAAG+TGG | 0.611235 | 4.4:+74524021 | MS.gene48847:CDS |
| AAGATGCAGAATGGAGAGGT+GGG | 0.613873 | 4.4:+74518320 | MS.gene48847:CDS |
| CAAGCCTTCCAGTAAAAGAA+CGG | 0.630801 | 4.4:-74521854 | None:intergenic |
| TTGCTAATCGAGCTGCTGAG+AGG | 0.671815 | 4.4:+74521874 | MS.gene48847:CDS |
| AAATAATCATCATCTTTGGG+AGG | 0.679374 | 4.4:-74524045 | None:intergenic |
| GAGTGGAAGAGTTTCAAGGG+TGG | 0.680073 | 4.4:-74518181 | None:intergenic |
| ACTGCGAGGACAGAAGCTTG+AGG | 0.687429 | 4.4:+74521634 | MS.gene48847:CDS |
| GATTTGAAGGTTGAAATGAG+TGG | 0.689513 | 4.4:-74518198 | None:intergenic |
| GTCGACCATTCGATCTATGG+CGG | 0.692504 | 4.4:-74522981 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATGATAATATAACAA+AGG | + | chr4.4:74519675-74519694 | MS.gene48847:intron | 10.0% |
| !! | TTCTTCATAATTATTTATTA+TGG | - | chr4.4:74523273-74523292 | None:intergenic | 10.0% |
| !!! | ATTTGAAATATCATATTTTT+AGG | + | chr4.4:74523640-74523659 | MS.gene48847:intron | 10.0% |
| !!! | TAATAAAAAAGAATGTTTTT+GGG | + | chr4.4:74523838-74523857 | MS.gene48847:intron | 10.0% |
| !!! | TTAATAAAAAAGAATGTTTT+TGG | + | chr4.4:74523837-74523856 | MS.gene48847:intron | 10.0% |
| !!! | TTTGAAATATCATATTTTTA+GGG | + | chr4.4:74523641-74523660 | MS.gene48847:intron | 10.0% |
| !!! | TTTGGTTAATTATTATTTTT+TGG | - | chr4.4:74519376-74519395 | None:intergenic | 10.0% |
| !! | AAAGTAATTACACAATTATA+AGG | - | chr4.4:74521604-74521623 | None:intergenic | 15.0% |
| !! | AATAAGAAAATGAATAGAAA+AGG | + | chr4.4:74521958-74521977 | MS.gene48847:intron | 15.0% |
| !! | ATAAGAAAATGAATAGAAAA+GGG | + | chr4.4:74521959-74521978 | MS.gene48847:intron | 15.0% |
| !! | CAAATTAAAAACAAAATAAG+AGG | + | chr4.4:74519392-74519411 | MS.gene48847:intron | 15.0% |
| !! | CATTATTCTTAATTCTTATA+AGG | + | chr4.4:74522381-74522400 | MS.gene48847:intron | 15.0% |
| !! | TATAATTGTGTAATTACTTT+AGG | + | chr4.4:74521604-74521623 | MS.gene48847:intron | 15.0% |
| !!! | CTCTTATTTTGTTTTTAATT+TGG | - | chr4.4:74519394-74519413 | None:intergenic | 15.0% |
| !!! | GTTTTACAAATTGATAATAA+AGG | - | chr4.4:74521228-74521247 | None:intergenic | 15.0% |
| !!! | TAACATTTTTGAAAAAAATG+AGG | + | chr4.4:74523668-74523687 | MS.gene48847:intron | 15.0% |
| !!! | TATCAATAGATCATTATTTT+AGG | - | chr4.4:74522623-74522642 | None:intergenic | 15.0% |
| !!! | TATTATTTTTTGGTGATTTT+CGG | - | chr4.4:74519366-74519385 | None:intergenic | 15.0% |
| !!! | TGTTCTTAAATTTTATTTTC+TGG | - | chr4.4:74519341-74519360 | None:intergenic | 15.0% |
| !!! | TTCTATTCATTTTCTTATTT+TGG | - | chr4.4:74521957-74521976 | None:intergenic | 15.0% |
| !!! | TTGAAAATTTTAATCAGTTA+GGG | + | chr4.4:74518904-74518923 | MS.gene48847:intron | 15.0% |
| !!! | TTGCATTTTCTAAATTTTTT+GGG | - | chr4.4:74519568-74519587 | None:intergenic | 15.0% |
| !!! | TTTGCATTTTCTAAATTTTT+TGG | - | chr4.4:74519569-74519588 | None:intergenic | 15.0% |
| !! | AAAGAAAAGATGTAAAGATT+TGG | + | chr4.4:74519805-74519824 | MS.gene48847:intron | 20.0% |
| !! | AAAGATAAATTAGAATTCTG+CGG | - | chr4.4:74523177-74523196 | None:intergenic | 20.0% |
| !! | AAATGATGTTACAAAGTAAA+CGG | - | chr4.4:74520501-74520520 | None:intergenic | 20.0% |
| !! | AAGAAAAGATGTAAAGATTT+GGG | + | chr4.4:74519806-74519825 | MS.gene48847:intron | 20.0% |
| !! | AAGAATTAAGAATAATGACT+TGG | - | chr4.4:74522378-74522397 | None:intergenic | 20.0% |
| !! | ACGAACAAAAGATAAAATAA+AGG | + | chr4.4:74522209-74522228 | MS.gene48847:intron | 20.0% |
| !! | ACTGCAAAATGTTAAAATAT+TGG | - | chr4.4:74520639-74520658 | None:intergenic | 20.0% |
| !! | ATAGTAAATAAGTATGTGTA+AGG | + | chr4.4:74518690-74518709 | MS.gene48847:intron | 20.0% |
| !! | ATTTAGACATATGTTTGAAT+TGG | - | chr4.4:74520837-74520856 | None:intergenic | 20.0% |
| !! | CTATTATCTTTATACTCTAA+TGG | + | chr4.4:74522551-74522570 | MS.gene48847:intron | 20.0% |
| !! | TATAAAATTGTTTGCCTAAA+AGG | + | chr4.4:74523381-74523400 | MS.gene48847:intron | 20.0% |
| !! | TGATAAAATAACATTAGTGA+AGG | - | chr4.4:74520718-74520737 | None:intergenic | 20.0% |
| !! | TTATCAATGGTAATAAAAAC+AGG | + | chr4.4:74520732-74520751 | MS.gene48847:intron | 20.0% |
| !!! | AAAACTGGTTCTTATTTATA+AGG | + | chr4.4:74522719-74522738 | MS.gene48847:intron | 20.0% |
| !!! | ACACATAAATTTTATCCAAT+AGG | - | chr4.4:74520059-74520078 | None:intergenic | 20.0% |
| !!! | ACATTAACTCTTTTCATATA+GGG | + | chr4.4:74518658-74518677 | MS.gene48847:intron | 20.0% |
| !!! | ATTTTTGAAAAAAATGAGGA+AGG | + | chr4.4:74523672-74523691 | MS.gene48847:intron | 20.0% |
| !!! | CACTAATGTTATTTTATCAA+TGG | + | chr4.4:74520719-74520738 | MS.gene48847:intron | 20.0% |
| !!! | GTCAAAAGAGTATATAAAAA+AGG | + | chr4.4:74520891-74520910 | MS.gene48847:intron | 20.0% |
| !!! | GTTGAAAATTTTAATCAGTT+AGG | + | chr4.4:74518903-74518922 | MS.gene48847:intron | 20.0% |
| !!! | TATATAGTTTAAAACCAGTT+TGG | + | chr4.4:74523357-74523376 | MS.gene48847:intron | 20.0% |
| !!! | TTTCAATTTTTACATGTAGA+TGG | + | chr4.4:74520519-74520538 | MS.gene48847:intron | 20.0% |
| !!! | TTTTATGAATTGTGATGAAA+TGG | + | chr4.4:74519701-74519720 | MS.gene48847:intron | 20.0% |
| !!! | TTTTTATGTTTGCGAATTAT+TGG | - | chr4.4:74522117-74522136 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAAAAATGAGGAA+GGG | + | chr4.4:74523673-74523692 | MS.gene48847:intron | 20.0% |
| ! | AAAAATTAACTTTCCCATAG+TGG | - | chr4.4:74519139-74519158 | None:intergenic | 25.0% |
| ! | AAAATTAACTTTCCCATAGT+GGG | - | chr4.4:74519138-74519157 | None:intergenic | 25.0% |
| ! | AAACACAGTTGTAAAATGTT+GGG | + | chr4.4:74518969-74518988 | MS.gene48847:intron | 25.0% |
| ! | AACTGAAACTAAAAAACAAC+AGG | - | chr4.4:74518886-74518905 | None:intergenic | 25.0% |
| ! | AATGATGTTACAAAGTAAAC+GGG | - | chr4.4:74520500-74520519 | None:intergenic | 25.0% |
| ! | ACATATGTCTAAATGTGATT+TGG | + | chr4.4:74520843-74520862 | MS.gene48847:intron | 25.0% |
| ! | ACATATGTTTGAATTGGTAA+TGG | - | chr4.4:74520831-74520850 | None:intergenic | 25.0% |
| ! | ACTGAAACTAAAAAACAACA+GGG | - | chr4.4:74518885-74518904 | None:intergenic | 25.0% |
| ! | AGAAAAGATGTAAAGATTTG+GGG | + | chr4.4:74519807-74519826 | MS.gene48847:intron | 25.0% |
| ! | AGCATTTCACTTTATCAAAT+TGG | + | chr4.4:74520170-74520189 | MS.gene48847:intron | 25.0% |
| ! | ATAAGATGAATAGAGTAGAA+TGG | + | chr4.4:74520453-74520472 | MS.gene48847:intron | 25.0% |
| ! | ATGAAAAGAGAAGACAATTA+TGG | + | chr4.4:74523898-74523917 | MS.gene48847:intron | 25.0% |
| ! | ATTTGATCAAACAAGAAACA+TGG | - | chr4.4:74519943-74519962 | None:intergenic | 25.0% |
| ! | CCTATAATTCAAAATCATCT+TGG | - | chr4.4:74521764-74521783 | None:intergenic | 25.0% |
| ! | GAGAAATAATCATCATCTTT+GGG | - | chr4.4:74524051-74524070 | None:intergenic | 25.0% |
| ! | TAAACACAGTTGTAAAATGT+TGG | + | chr4.4:74518968-74518987 | MS.gene48847:intron | 25.0% |
| ! | TACACAATTATAAGGATCAA+TGG | - | chr4.4:74521596-74521615 | None:intergenic | 25.0% |
| ! | TAGAAAATGCAAATCTGAAA+TGG | + | chr4.4:74519576-74519595 | MS.gene48847:intron | 25.0% |
| ! | TATATCTACACGATGAATAT+GGG | + | chr4.4:74522948-74522967 | MS.gene48847:CDS | 25.0% |
| ! | TATTTCAAATACACTTACCA+TGG | - | chr4.4:74523630-74523649 | None:intergenic | 25.0% |
| ! | TCTAAAAACAGCATTAACTT+TGG | + | chr4.4:74518264-74518283 | MS.gene48847:CDS | 25.0% |
| ! | TCTGATGCTTATTTAGTATT+TGG | + | chr4.4:74522806-74522825 | MS.gene48847:intron | 25.0% |
| ! | TGAGAAATAATCATCATCTT+TGG | - | chr4.4:74524052-74524071 | None:intergenic | 25.0% |
| ! | TGTATGTTCCTTAGTTAAAA+TGG | - | chr4.4:74520300-74520319 | None:intergenic | 25.0% |
| ! | TTACAACTGTGTTTACAAAA+TGG | - | chr4.4:74518963-74518982 | None:intergenic | 25.0% |
| ! | TTATTAGGTAAAATCTACGT+AGG | - | chr4.4:74520123-74520142 | None:intergenic | 25.0% |
| !! | AAACAATTTTATAGCCAAAC+TGG | - | chr4.4:74523374-74523393 | None:intergenic | 25.0% |
| !! | AACCTATTTCTTAAAATTCC+TGG | + | chr4.4:74519523-74519542 | MS.gene48847:intron | 25.0% |
| !! | AATCTGAAGTAAATTGGATT+CGG | - | chr4.4:74521264-74521283 | None:intergenic | 25.0% |
| !! | AATTTTTACATGTAGATGGT+TGG | + | chr4.4:74520523-74520542 | MS.gene48847:intron | 25.0% |
| !! | ACAAACTTGATTTTTCCTTT+CGG | - | chr4.4:74522784-74522803 | None:intergenic | 25.0% |
| !! | ACCTATTTCTTAAAATTCCT+GGG | + | chr4.4:74519524-74519543 | MS.gene48847:intron | 25.0% |
| !! | AGAAAATGCAAATCTGAAAT+GGG | + | chr4.4:74519577-74519596 | MS.gene48847:intron | 25.0% |
| !! | AGTCCTTTAAGAATTCAAAA+TGG | + | chr4.4:74522577-74522596 | MS.gene48847:intron | 25.0% |
| !! | ATCAAATTGTAACAGTTTTC+TGG | - | chr4.4:74520998-74521017 | None:intergenic | 25.0% |
| !! | ATGTTTCTTGTTTGATCAAA+TGG | + | chr4.4:74519942-74519961 | MS.gene48847:intron | 25.0% |
| !! | CCAAGATGATTTTGAATTAT+AGG | + | chr4.4:74521761-74521780 | MS.gene48847:intron | 25.0% |
| !! | GAACCATTTTGAATTCTTAA+AGG | - | chr4.4:74522583-74522602 | None:intergenic | 25.0% |
| !! | GACATTAACTCTTTTCATAT+AGG | + | chr4.4:74518657-74518676 | MS.gene48847:intron | 25.0% |
| !! | GATTTGAATTTTGTTCCTTT+AGG | + | chr4.4:74523753-74523772 | MS.gene48847:intron | 25.0% |
| !! | GTAAAAAATCAATTTTCCCA+TGG | + | chr4.4:74519964-74519983 | MS.gene48847:intron | 25.0% |
| !! | TAACATTTTGCAGTATTTTC+AGG | + | chr4.4:74520645-74520664 | MS.gene48847:intron | 25.0% |
| !! | TAATTGTCTTCTCTTTTCAT+TGG | - | chr4.4:74523898-74523917 | None:intergenic | 25.0% |
| !! | TGAATTTTTGCATGATTTGA+AGG | - | chr4.4:74518214-74518233 | None:intergenic | 25.0% |
| !! | TGTATTGCAATTTTACCTTT+TGG | - | chr4.4:74520955-74520974 | None:intergenic | 25.0% |
| !! | TTTTTGGATATTCGTCATTT+TGG | + | chr4.4:74518452-74518471 | MS.gene48847:intron | 25.0% |
| !!! | AAAAAGTGTTTTACCGTTAA+AGG | - | chr4.4:74518415-74518434 | None:intergenic | 25.0% |
| !!! | AAAAGTGTTTTACCGTTAAA+GGG | - | chr4.4:74518414-74518433 | None:intergenic | 25.0% |
| !!! | ACACCTGTTTTTGAAAATTT+AGG | - | chr4.4:74520779-74520798 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTAACATTTTGTG+TGG | + | chr4.4:74523534-74523553 | MS.gene48847:intron | 25.0% |
| !!! | GTTTGTTTTGTTGTTGTTTT+TGG | + | chr4.4:74518436-74518455 | MS.gene48847:intron | 25.0% |
| !!! | TAGATCATTATTTTAGGATG+TGG | - | chr4.4:74522617-74522636 | None:intergenic | 25.0% |
| AAATAATCATCATCTTTGGG+AGG | - | chr4.4:74524048-74524067 | None:intergenic | 30.0% | |
| AACATAGAACCTAATATGCA+AGG | - | chr4.4:74521395-74521414 | None:intergenic | 30.0% | |
| AACCAGTAATAATCTGATAC+AGG | - | chr4.4:74520362-74520381 | None:intergenic | 30.0% | |
| ACACGCTTAAAATTCTTTCA+GGG | + | chr4.4:74523562-74523581 | MS.gene48847:intron | 30.0% | |
| ACAGTTCATATACTACATGA+AGG | + | chr4.4:74523076-74523095 | MS.gene48847:intron | 30.0% | |
| ACATAGAACCTAATATGCAA+GGG | - | chr4.4:74521394-74521413 | None:intergenic | 30.0% | |
| AGAAGATGGAAGCTAATTAA+AGG | + | chr4.4:74520589-74520608 | MS.gene48847:intron | 30.0% | |
| AGGAAACACTAAAAGTAAAC+GGG | + | chr4.4:74520752-74520771 | MS.gene48847:intron | 30.0% | |
| AGTTATAAAACGACACTTTG+AGG | - | chr4.4:74523154-74523173 | None:intergenic | 30.0% | |
| ATACAATAATCAGAGAGCAA+AGG | - | chr4.4:74519648-74519667 | None:intergenic | 30.0% | |
| ATGAATAGAAAAGGGATGAA+TGG | + | chr4.4:74521967-74521986 | MS.gene48847:intron | 30.0% | |
| ATGTTCCTTCTTTGATCTAA+TGG | - | chr4.4:74519164-74519183 | None:intergenic | 30.0% | |
| ATTAGATCAAAGAAGGAACA+TGG | + | chr4.4:74519163-74519182 | MS.gene48847:intron | 30.0% | |
| CAGGAAACACTAAAAGTAAA+CGG | + | chr4.4:74520751-74520770 | MS.gene48847:intron | 30.0% | |
| CAGTTCATATACTACATGAA+GGG | + | chr4.4:74523077-74523096 | MS.gene48847:intron | 30.0% | |
| CATACTAAACAACAAAGACA+CGG | - | chr4.4:74521529-74521548 | None:intergenic | 30.0% | |
| GAAAAGATGTAAAGATTTGG+GGG | + | chr4.4:74519808-74519827 | MS.gene48847:intron | 30.0% | |
| GAAGCTGATGAGTTTATAAT+TGG | + | chr4.4:74521783-74521802 | MS.gene48847:CDS | 30.0% | |
| GAATTGGAAATCAGTGAATT+GGG | - | chr4.4:74521171-74521190 | None:intergenic | 30.0% | |
| GCAAACATAAAAAATGCTCT+GGG | + | chr4.4:74522124-74522143 | MS.gene48847:intron | 30.0% | |
| GTATATCTACACGATGAATA+TGG | + | chr4.4:74522947-74522966 | MS.gene48847:CDS | 30.0% | |
| TAATTGTGATAGAGAGAAGA+TGG | + | chr4.4:74520575-74520594 | MS.gene48847:intron | 30.0% | |
| TAGAGTTCTTAAAGCAAATG+CGG | - | chr4.4:74522534-74522553 | None:intergenic | 30.0% | |
| TAGATGGTTGGAATTACATT+TGG | + | chr4.4:74520535-74520554 | MS.gene48847:intron | 30.0% | |
| TCTAATTCCACTCTCTTATT+AGG | - | chr4.4:74520138-74520157 | None:intergenic | 30.0% | |
| TGAATTGGAAATCAGTGAAT+TGG | - | chr4.4:74521172-74521191 | None:intergenic | 30.0% | |
| TGGTATGTAAGTTTAGTCAA+TGG | + | chr4.4:74521493-74521512 | MS.gene48847:intron | 30.0% | |
| TTATGTTTGCGAATTATTGG+AGG | - | chr4.4:74522114-74522133 | None:intergenic | 30.0% | |
| TTATTTATTATGGACCATGC+AGG | - | chr4.4:74523263-74523282 | None:intergenic | 30.0% | |
| TTGACTAAGCAACATATTCT+TGG | + | chr4.4:74521129-74521148 | MS.gene48847:intron | 30.0% | |
| TTGTCAACACTACATTACAA+TGG | - | chr4.4:74521904-74521923 | None:intergenic | 30.0% | |
| TTTCACCATTAGATCAAAGA+AGG | + | chr4.4:74519156-74519175 | MS.gene48847:intron | 30.0% | |
| TTTGAGGAAAAGATCCAATT+AGG | - | chr4.4:74523138-74523157 | None:intergenic | 30.0% | |
| TTTGTGCGATGCTTAAAATT+CGG | + | chr4.4:74521704-74521723 | MS.gene48847:intron | 30.0% | |
| ! | AAAAATCAATTTTCCCATGG+TGG | + | chr4.4:74519967-74519986 | MS.gene48847:intron | 30.0% |
| ! | AAAATCAATTTTCCCATGGT+GGG | + | chr4.4:74519968-74519987 | MS.gene48847:intron | 30.0% |
| ! | ATTTTACAATGGTCTCTAAG+GGG | + | chr4.4:74523731-74523750 | MS.gene48847:intron | 30.0% |
| ! | CATTTTACAATGGTCTCTAA+GGG | + | chr4.4:74523730-74523749 | MS.gene48847:intron | 30.0% |
| ! | CGTTAATGACCATTTTACAA+TGG | + | chr4.4:74523720-74523739 | MS.gene48847:intron | 30.0% |
| ! | GAATTATTGGAGGTATATCT+CGG | - | chr4.4:74522104-74522123 | None:intergenic | 30.0% |
| ! | GATTTTACCTAATAAGAGAG+TGG | + | chr4.4:74520128-74520147 | MS.gene48847:intron | 30.0% |
| ! | GGTCCTAAATTTTCAAAAAC+AGG | + | chr4.4:74520773-74520792 | MS.gene48847:intron | 30.0% |
| ! | GTAAATCTCACTCTTGTTTA+CGG | + | chr4.4:74519766-74519785 | MS.gene48847:intron | 30.0% |
| ! | GTAAGTTTAGTCAATGGATT+TGG | + | chr4.4:74521499-74521518 | MS.gene48847:intron | 30.0% |
| ! | TAACATTAGTGAAGGCATAA+CGG | - | chr4.4:74520710-74520729 | None:intergenic | 30.0% |
| ! | TCGAATAGATAGATTTTGAG+AGG | - | chr4.4:74519282-74519301 | None:intergenic | 30.0% |
| ! | TGCAATTTTACCTTTTGGAT+TGG | - | chr4.4:74520950-74520969 | None:intergenic | 30.0% |
| ! | TGGTAAAACACTTTCCTTTT+AGG | - | chr4.4:74523398-74523417 | None:intergenic | 30.0% |
| ! | TTATTTCTCGCACTTAATAG+AGG | + | chr4.4:74522844-74522863 | MS.gene48847:intron | 30.0% |
| !! | AATGTGTTCAAGCTTTGAAT+TGG | - | chr4.4:74521187-74521206 | None:intergenic | 30.0% |
| !! | ACCCAGGAATTTTAAGAAAT+AGG | - | chr4.4:74519528-74519547 | None:intergenic | 30.0% |
| !! | GAAGAAGTATGCATGATTTT+GGG | + | chr4.4:74523287-74523306 | MS.gene48847:intron | 30.0% |
| !! | TGAAGAAGTATGCATGATTT+TGG | + | chr4.4:74523286-74523305 | MS.gene48847:intron | 30.0% |
| !!! | AACCAGTTGTGTTTTTAAGT+CGG | - | chr4.4:74522746-74522765 | None:intergenic | 30.0% |
| !!! | TGGATGTTTTAAGAACAATG+AGG | - | chr4.4:74519321-74519340 | None:intergenic | 30.0% |
| !!! | TGTGATTTGGTACTATGTTT+TGG | + | chr4.4:74518928-74518947 | MS.gene48847:intron | 30.0% |
| !!! | TGTTTTAAGAACAATGAGGA+TGG | - | chr4.4:74519317-74519336 | None:intergenic | 30.0% |
| AAAGATCCAATTAGGAGGTA+AGG | - | chr4.4:74523130-74523149 | None:intergenic | 35.0% | |
| AAATGAGTGGAAGAGTTTCA+AGG | - | chr4.4:74518188-74518207 | None:intergenic | 35.0% | |
| AAATGGGAATGAGAAACCAA+TGG | + | chr4.4:74519593-74519612 | MS.gene48847:intron | 35.0% | |
| AATCAGTTAGGGATGTGATT+TGG | + | chr4.4:74518915-74518934 | MS.gene48847:intron | 35.0% | |
| AATCATCTTGGTTATCTCTG+AGG | - | chr4.4:74521752-74521771 | None:intergenic | 35.0% | |
| AATGAGTGGAAGAGTTTCAA+GGG | - | chr4.4:74518187-74518206 | None:intergenic | 35.0% | |
| ACTAATGAAGTGCAGAATCA+GGG | - | chr4.4:74518479-74518498 | None:intergenic | 35.0% | |
| ACTTTGATCTCGTAACCTAA+AGG | - | chr4.4:74523771-74523790 | None:intergenic | 35.0% | |
| AGAGACTTCAATACATTGAG+GGG | + | chr4.4:74518813-74518832 | MS.gene48847:intron | 35.0% | |
| AGATGAGATAAGAACCTCTA+TGG | - | chr4.4:74522493-74522512 | None:intergenic | 35.0% | |
| AGCCTGTATCAGATTATTAC+TGG | + | chr4.4:74520357-74520376 | MS.gene48847:intron | 35.0% | |
| ATGTTACCTTACCTCCTAAT+TGG | + | chr4.4:74523121-74523140 | MS.gene48847:intron | 35.0% | |
| ATTGTATCCTTCAATGCTGT+CGG | + | chr4.4:74523037-74523056 | MS.gene48847:intron | 35.0% | |
| CACGCTTAAAATTCTTTCAG+GGG | + | chr4.4:74523563-74523582 | MS.gene48847:intron | 35.0% | |
| CAGAGACTTCAATACATTGA+GGG | + | chr4.4:74518812-74518831 | MS.gene48847:intron | 35.0% | |
| CATATTAGGTTCTATGTTCC+TGG | + | chr4.4:74521397-74521416 | MS.gene48847:intron | 35.0% | |
| CCTTAGAGACCATTGTAAAA+TGG | - | chr4.4:74523732-74523751 | None:intergenic | 35.0% | |
| CCTTAGTTAAAATGGTCAAC+CGG | - | chr4.4:74520292-74520311 | None:intergenic | 35.0% | |
| CCTTGTAGTTCAAGATTCTT+GGG | - | chr4.4:74524009-74524028 | None:intergenic | 35.0% | |
| CGCAAACATAAAAAATGCTC+TGG | + | chr4.4:74522123-74522142 | MS.gene48847:intron | 35.0% | |
| CTAAGATACTACCATTCCAT+TGG | - | chr4.4:74519612-74519631 | None:intergenic | 35.0% | |
| CTAAGGAACATACATTGTGA+TGG | + | chr4.4:74520306-74520325 | MS.gene48847:intron | 35.0% | |
| CTACAAGGAAAACTTAGAAG+TGG | + | chr4.4:74524021-74524040 | MS.gene48847:CDS | 35.0% | |
| GAATTGTGATGAAATGGAAG+TGG | + | chr4.4:74519707-74519726 | MS.gene48847:intron | 35.0% | |
| GACACGCTTAAAATTCTTTC+AGG | + | chr4.4:74523561-74523580 | MS.gene48847:intron | 35.0% | |
| GATTTGAAGGTTGAAATGAG+TGG | - | chr4.4:74518201-74518220 | None:intergenic | 35.0% | |
| GGGAGAGAGATAATGTAAAA+AGG | - | chr4.4:74519216-74519235 | None:intergenic | 35.0% | |
| GGTTGGAATTACATTTGGTT+AGG | + | chr4.4:74520540-74520559 | MS.gene48847:intron | 35.0% | |
| GTGTGCTTATTAGTGATGTT+AGG | + | chr4.4:74521470-74521489 | MS.gene48847:intron | 35.0% | |
| TATCTCAACTCTAACTTCAG+AGG | + | chr4.4:74522917-74522936 | MS.gene48847:intron | 35.0% | |
| TCAGAGACTTCAATACATTG+AGG | + | chr4.4:74518811-74518830 | MS.gene48847:intron | 35.0% | |
| TCATTCAACCCTTGCATATT+AGG | + | chr4.4:74521383-74521402 | MS.gene48847:intron | 35.0% | |
| TCCTTGTAGTTCAAGATTCT+TGG | - | chr4.4:74524010-74524029 | None:intergenic | 35.0% | |
| TGCTTATTAGTGATGTTAGG+TGG | + | chr4.4:74521473-74521492 | MS.gene48847:intron | 35.0% | |
| TGTTAGAAACACTTCTTTCC+AGG | + | chr4.4:74519081-74519100 | MS.gene48847:intron | 35.0% | |
| TTATCTTAGTCACTCAGTAC+TGG | - | chr4.4:74519918-74519937 | None:intergenic | 35.0% | |
| TTTCATTGGCACTTCAAAAC+AGG | - | chr4.4:74523884-74523903 | None:intergenic | 35.0% | |
| ! | AACATAGTCCGTTCTTTTAC+TGG | + | chr4.4:74521846-74521865 | MS.gene48847:CDS | 35.0% |
| ! | CAACAGGGTAATAGTCATTT+TGG | - | chr4.4:74518870-74518889 | None:intergenic | 35.0% |
| ! | CCATTTTACAATGGTCTCTA+AGG | + | chr4.4:74523729-74523748 | MS.gene48847:intron | 35.0% |
| ! | GCGCAAAATCTGAAGTAAAT+TGG | - | chr4.4:74521270-74521289 | None:intergenic | 35.0% |
| ! | GGTTCTTATCTCATCTTTTG+TGG | + | chr4.4:74522497-74522516 | MS.gene48847:intron | 35.0% |
| ! | TACTCCTATGATGGAACTTA+GGG | + | chr4.4:74522696-74522715 | MS.gene48847:intron | 35.0% |
| ! | TCACTCTCTACTCATTTTAG+AGG | - | chr4.4:74521292-74521311 | None:intergenic | 35.0% |
| ! | TCTAAAATGAGTAGAGAGTG+AGG | + | chr4.4:74521291-74521310 | MS.gene48847:intron | 35.0% |
| ! | TTACTCCTATGATGGAACTT+AGG | + | chr4.4:74522695-74522714 | MS.gene48847:intron | 35.0% |
| ! | TTTTCCCTAAGTTCCATCAT+AGG | - | chr4.4:74522703-74522722 | None:intergenic | 35.0% |
| !! | AAGTACTTTGAGACTGTTTG+AGG | - | chr4.4:74522327-74522346 | None:intergenic | 35.0% |
| !! | AGAGTAGAATGGACTAGAAT+CGG | + | chr4.4:74520464-74520483 | MS.gene48847:intron | 35.0% |
| !! | AGATAGATTTTGAGAGGTTG+TGG | - | chr4.4:74519276-74519295 | None:intergenic | 35.0% |
| !! | GAATTGGTAATGGAATAGAG+TGG | - | chr4.4:74520821-74520840 | None:intergenic | 35.0% |
| !! | TCTAGCACTTGTTTTCCTAT+TGG | + | chr4.4:74520041-74520060 | MS.gene48847:intron | 35.0% |
| !!! | GTTTTCTGGCTTGTTTTTCA+TGG | - | chr4.4:74520984-74521003 | None:intergenic | 35.0% |
| !!! | TTACCTTTTGGATTGGTGTT+TGG | - | chr4.4:74520943-74520962 | None:intergenic | 35.0% |
| AAAGAAGGTGGCGTTTAGTA+TGG | - | chr4.4:74520010-74520029 | None:intergenic | 40.0% | |
| AACAATGAGGATGGAGACAA+TGG | - | chr4.4:74519308-74519327 | None:intergenic | 40.0% | |
| AAGAAAGATGCAGAATGGAG+AGG | + | chr4.4:74518316-74518335 | MS.gene48847:CDS | 40.0% | |
| AAGAAGGTGGCGTTTAGTAT+GGG | - | chr4.4:74520009-74520028 | None:intergenic | 40.0% | |
| AAGCCAAACACCAATCCAAA+AGG | + | chr4.4:74520937-74520956 | MS.gene48847:intron | 40.0% | |
| AATACATTGAGGGGCTATTG+TGG | + | chr4.4:74518822-74518841 | MS.gene48847:intron | 40.0% | |
| AATGAACATCGCAGAAGAAG+AGG | + | chr4.4:74521664-74521683 | MS.gene48847:CDS | 40.0% | |
| ACATACGACACAACAACACA+TGG | - | chr4.4:74521431-74521450 | None:intergenic | 40.0% | |
| ACTAGTGATCACTGATGAGA+GGG | - | chr4.4:74523422-74523441 | None:intergenic | 40.0% | |
| AGACACGCAGTCATATTTAG+TGG | - | chr4.4:74521056-74521075 | None:intergenic | 40.0% | |
| AGATTTGGGGGAAATGATGA+AGG | + | chr4.4:74519820-74519839 | MS.gene48847:intron | 40.0% | |
| AGGTTACGAGATCAAAGTCT+TGG | + | chr4.4:74523773-74523792 | MS.gene48847:intron | 40.0% | |
| ATGAAGCGCAAACATAGAAC+AGG | - | chr4.4:74520405-74520424 | None:intergenic | 40.0% | |
| ATGGAGGAGAGAGAAAATGA+TGG | + | chr4.4:74519869-74519888 | MS.gene48847:intron | 40.0% | |
| CAACACATGGTATCATTTCC+AGG | - | chr4.4:74521418-74521437 | None:intergenic | 40.0% | |
| CAAGCCTTCCAGTAAAAGAA+CGG | - | chr4.4:74521857-74521876 | None:intergenic | 40.0% | |
| CCCAAGAATCTTGAACTACA+AGG | + | chr4.4:74524006-74524025 | MS.gene48847:CDS | 40.0% | |
| CGGCAAAAATCCAGATTTAG+CGG | - | chr4.4:74520272-74520291 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | - | chr4.4:74518605-74518624 | None:intergenic | 40.0% | |
| CTGTTACAATTTGATGCAGC+AGG | + | chr4.4:74521003-74521022 | MS.gene48847:intron | 40.0% | |
| CTTATTTCCATGAGCATTCC+AGG | - | chr4.4:74522271-74522290 | None:intergenic | 40.0% | |
| CTTCTGCGATGTTCATTATC+CGG | - | chr4.4:74521661-74521680 | None:intergenic | 40.0% | |
| GAAATGGGTCCCACATAAAA+TGG | - | chr4.4:74520088-74520107 | None:intergenic | 40.0% | |
| GACTAATGAAGTGCAGAATC+AGG | - | chr4.4:74518480-74518499 | None:intergenic | 40.0% | |
| GAGAGATATTTCTCCACATC+AGG | + | chr4.4:74523961-74523980 | MS.gene48847:CDS | 40.0% | |
| GAGAGTGAGGAAATCAATGA+TGG | + | chr4.4:74521304-74521323 | MS.gene48847:intron | 40.0% | |
| GAGGAAAAGATCCAATTAGG+AGG | - | chr4.4:74523135-74523154 | None:intergenic | 40.0% | |
| GGAATGAGAAACCAATGGAA+TGG | + | chr4.4:74519598-74519617 | MS.gene48847:intron | 40.0% | |
| GGCTACTCGTTATACATTCA+GGG | + | chr4.4:74518843-74518862 | MS.gene48847:intron | 40.0% | |
| TAGAAACACTTCTTTCCAGG+TGG | + | chr4.4:74519084-74519103 | MS.gene48847:intron | 40.0% | |
| TCAACTCTAACTTCAGAGGT+TGG | + | chr4.4:74522921-74522940 | MS.gene48847:intron | 40.0% | |
| TCACGATATTCCGCTAAATC+TGG | + | chr4.4:74520259-74520278 | MS.gene48847:intron | 40.0% | |
| TCATAGCTGGCTGATATGTT+TGG | + | chr4.4:74520421-74520440 | MS.gene48847:intron | 40.0% | |
| TCATCAACAACTAAACGTGC+TGG | + | chr4.4:74521084-74521103 | MS.gene48847:intron | 40.0% | |
| TCCTTTCCATCACAAGACTT+TGG | - | chr4.4:74521813-74521832 | None:intergenic | 40.0% | |
| TCGAACCTAACACCTTAACA+AGG | - | chr4.4:74518572-74518591 | None:intergenic | 40.0% | |
| TGAAGCGCAAACATAGAACA+GGG | - | chr4.4:74520404-74520423 | None:intergenic | 40.0% | |
| TGATGGAACTTAGGGAAAAC+TGG | + | chr4.4:74522704-74522723 | MS.gene48847:intron | 40.0% | |
| TGCAGAAATTGAAACCTGCA+TGG | + | chr4.4:74523246-74523265 | MS.gene48847:intron | 40.0% | |
| TGGCTACTCGTTATACATTC+AGG | + | chr4.4:74518842-74518861 | MS.gene48847:intron | 40.0% | |
| TGTGATGAAATGGAAGTGGT+AGG | + | chr4.4:74519711-74519730 | MS.gene48847:intron | 40.0% | |
| TGTGTTTGAATGAGAAACCC+AGG | - | chr4.4:74519544-74519563 | None:intergenic | 40.0% | |
| TTCTCGCACTTAATAGAGGT+TGG | + | chr4.4:74522848-74522867 | MS.gene48847:intron | 40.0% | |
| ! | ACTCTATCGTGTCGATAGAA+TGG | - | chr4.4:74523468-74523487 | None:intergenic | 40.0% |
| ! | AGTGATGTCTTTTCCCACTA+TGG | + | chr4.4:74519122-74519141 | MS.gene48847:intron | 40.0% |
| ! | CGCTAAATCTGGATTTTTGC+CGG | + | chr4.4:74520270-74520289 | MS.gene48847:intron | 40.0% |
| ! | GACCGACTTAAAAACACAAC+TGG | + | chr4.4:74522741-74522760 | MS.gene48847:intron | 40.0% |
| ! | GTGATGTCTTTTCCCACTAT+GGG | + | chr4.4:74519123-74519142 | MS.gene48847:intron | 40.0% |
| ! | TAGTCCGTTCTTTTACTGGA+AGG | + | chr4.4:74521850-74521869 | MS.gene48847:CDS | 40.0% |
| ! | TCATCAGTGATCACTAGTCT+CGG | + | chr4.4:74523424-74523443 | MS.gene48847:intron | 40.0% |
| ! | TCCAAAGTCTTGTGATGGAA+AGG | + | chr4.4:74521809-74521828 | MS.gene48847:CDS | 40.0% |
| ! | TGTGTCCCACCATTTTATGT+GGG | + | chr4.4:74520076-74520095 | MS.gene48847:intron | 40.0% |
| ! | TTCAGTTTTCTGACCTGATG+TGG | - | chr4.4:74523977-74523996 | None:intergenic | 40.0% |
| !! | AATGATGGTGGAAGAAAGTG+TGG | + | chr4.4:74519884-74519903 | MS.gene48847:intron | 40.0% |
| !! | ATTGTGTCGATTCCTAACAC+AGG | + | chr4.4:74521342-74521361 | MS.gene48847:intron | 40.0% |
| !! | CAGAGAGCAAAGGTACTTAT+TGG | - | chr4.4:74519638-74519657 | None:intergenic | 40.0% |
| !! | CTTCACTTTTCGCCCTTTAA+CGG | + | chr4.4:74518399-74518418 | MS.gene48847:CDS | 40.0% |
| !! | GTTGTTTTCATGAGCTATCC+TGG | + | chr4.4:74522250-74522269 | MS.gene48847:intron | 40.0% |
| !! | TAGAGAGAGTGTTGGAAAGA+AGG | - | chr4.4:74520025-74520044 | None:intergenic | 40.0% |
| !!! | CCGGTTGACCATTTTAACTA+AGG | + | chr4.4:74520289-74520308 | MS.gene48847:intron | 40.0% |
| !!! | CTTTAGGTTTTGAAACTGCG+AGG | + | chr4.4:74521620-74521639 | MS.gene48847:intron | 40.0% |
| AAAGATGCAGAATGGAGAGG+TGG | + | chr4.4:74518319-74518338 | MS.gene48847:CDS | 45.0% | |
| AAGATGCAGAATGGAGAGGT+GGG | + | chr4.4:74518320-74518339 | MS.gene48847:CDS | 45.0% | |
| AATAACCCGCCTAGTGGTAT+TGG | + | chr4.4:74518525-74518544 | MS.gene48847:intron | 45.0% | |
| AATGAGGATGGAGACAATGG+TGG | - | chr4.4:74519305-74519324 | None:intergenic | 45.0% | |
| ACAAGAACCATCCTTACACC+TGG | + | chr4.4:74522659-74522678 | MS.gene48847:intron | 45.0% | |
| AGAAGGTGGCGTTTAGTATG+GGG | - | chr4.4:74520008-74520027 | None:intergenic | 45.0% | |
| ATGGGTCCCACATAAAATGG+TGG | - | chr4.4:74520085-74520104 | None:intergenic | 45.0% | |
| ATTCTTTCAGGGGCTTGAGT+AGG | + | chr4.4:74523573-74523592 | MS.gene48847:intron | 45.0% | |
| CATGTCGACCATTCGATCTA+TGG | - | chr4.4:74522987-74523006 | None:intergenic | 45.0% | |
| CTATGTTTGCGCTTCATAGC+TGG | + | chr4.4:74520408-74520427 | MS.gene48847:intron | 45.0% | |
| GACTAGTGATCACTGATGAG+AGG | - | chr4.4:74523423-74523442 | None:intergenic | 45.0% | |
| GAGGAGAGAGAAAATGATGG+TGG | + | chr4.4:74519872-74519891 | MS.gene48847:intron | 45.0% | |
| GATGCTCTTTCGTTACCGAA+AGG | + | chr4.4:74522766-74522785 | MS.gene48847:intron | 45.0% | |
| GCTGGCTGATATGTTTGGAT+TGG | + | chr4.4:74520426-74520445 | MS.gene48847:intron | 45.0% | |
| GGAGGAAGAAAGATGCAGAA+TGG | + | chr4.4:74518311-74518330 | MS.gene48847:CDS | 45.0% | |
| GTTGTGGTTCTTGTTGGTGT+TGG | - | chr4.4:74519260-74519279 | None:intergenic | 45.0% | |
| TACACTTACCATGGCAGCAT+AGG | - | chr4.4:74523621-74523640 | None:intergenic | 45.0% | |
| TAGCGATTCTGACCTGTGTT+AGG | - | chr4.4:74521357-74521376 | None:intergenic | 45.0% | |
| TGAGAGGTTGTGGTTCTTGT+TGG | - | chr4.4:74519266-74519285 | None:intergenic | 45.0% | |
| TGGGACCCATTTCAAAAGTG+CGG | + | chr4.4:74520095-74520114 | MS.gene48847:intron | 45.0% | |
| TGGGTCCCACATAAAATGGT+GGG | - | chr4.4:74520084-74520103 | None:intergenic | 45.0% | |
| TTTGGGGGAAATGATGAAGG+TGG | + | chr4.4:74519823-74519842 | MS.gene48847:intron | 45.0% | |
| ! | ACAAGTGCTAGAGAGAGTGT+TGG | - | chr4.4:74520033-74520052 | None:intergenic | 45.0% |
| ! | AGGCATCTTGTTTCTTCTGC+TGG | - | chr4.4:74523601-74523620 | None:intergenic | 45.0% |
| ! | AGTGAAGTCTTTTCCCACCA+TGG | - | chr4.4:74519984-74520003 | None:intergenic | 45.0% |
| ! | CTCACTCTTGTTTACGGTGA+TGG | + | chr4.4:74519772-74519791 | MS.gene48847:intron | 45.0% |
| ! | GACATAGAGCATCTCCATAG+AGG | + | chr4.4:74522476-74522495 | MS.gene48847:intron | 45.0% |
| ! | GGACTAGAATCGGCTAGTTA+GGG | + | chr4.4:74520474-74520493 | MS.gene48847:intron | 45.0% |
| ! | GGACTTCCAAAGTCTTGTGA+TGG | + | chr4.4:74521804-74521823 | MS.gene48847:CDS | 45.0% |
| ! | GGCATCTTGTTTCTTCTGCT+GGG | - | chr4.4:74523600-74523619 | None:intergenic | 45.0% |
| ! | GTGAAGTCTTTTCCCACCAT+GGG | - | chr4.4:74519983-74520002 | None:intergenic | 45.0% |
| ! | GTGCTCCTTGTTAAGGTGTT+AGG | + | chr4.4:74518564-74518583 | MS.gene48847:intron | 45.0% |
| ! | GTGTGTCCCACCATTTTATG+TGG | + | chr4.4:74520075-74520094 | MS.gene48847:intron | 45.0% |
| ! | TCCAAAACCGACAGCATTGA+AGG | - | chr4.4:74523047-74523066 | None:intergenic | 45.0% |
| ! | TCTTGGTGTGGACTTAGGAA+TGG | + | chr4.4:74518348-74518367 | MS.gene48847:CDS | 45.0% |
| ! | TGAGAGTGTGCTCCTTGTTA+AGG | + | chr4.4:74518557-74518576 | MS.gene48847:intron | 45.0% |
| ! | TGGACTAGAATCGGCTAGTT+AGG | + | chr4.4:74520473-74520492 | MS.gene48847:intron | 45.0% |
| ! | TTAACAAGGAGCACACTCTC+AGG | - | chr4.4:74518558-74518577 | None:intergenic | 45.0% |
| ! | TTCTCTCTTGGTGTGGACTT+AGG | + | chr4.4:74518343-74518362 | MS.gene48847:CDS | 45.0% |
| ! | TTTCGCGAGTTTTTCCTTCG+CGG | + | chr4.4:74520329-74520348 | MS.gene48847:intron | 45.0% |
| !! | AGAGAGTGTTGGAAAGAAGG+TGG | - | chr4.4:74520022-74520041 | None:intergenic | 45.0% |
| !! | TAGGTCCCGCACTTTTGAAA+TGG | - | chr4.4:74520104-74520123 | None:intergenic | 45.0% |
| !! | TCTTGTTGGTGTTGGTGAGT+GGG | - | chr4.4:74519252-74519271 | None:intergenic | 45.0% |
| !! | TTCTTGTTGGTGTTGGTGAG+TGG | - | chr4.4:74519253-74519272 | None:intergenic | 45.0% |
| !!! | AGGTCCCGCACTTTTGAAAT+GGG | - | chr4.4:74520103-74520122 | None:intergenic | 45.0% |
| !!! | GCTGTCGGTTTTGGATGAAA+TGG | + | chr4.4:74523052-74523071 | MS.gene48847:intron | 45.0% |
| !!! | TCCTTCAATGCTGTCGGTTT+TGG | + | chr4.4:74523043-74523062 | MS.gene48847:intron | 45.0% |
| AACTTCCTCCAAACGCGCTT+CGG | + | chr4.4:74518290-74518309 | MS.gene48847:CDS | 50.0% | |
| AAGAGTTTCAAGGGTGGCAC+TGG | - | chr4.4:74518178-74518197 | None:intergenic | 50.0% | |
| ACAAGATGCCTATGCTGCCA+TGG | + | chr4.4:74523610-74523629 | MS.gene48847:CDS | 50.0% | |
| ACATCGCAGAAGAAGAGGTC+TGG | + | chr4.4:74521669-74521688 | MS.gene48847:intron | 50.0% | |
| ACTGGCATTGCTCTCAGCAA+AGG | + | chr4.4:74518376-74518395 | MS.gene48847:CDS | 50.0% | |
| ATACAGGCTATTCACCGCGA+AGG | - | chr4.4:74520346-74520365 | None:intergenic | 50.0% | |
| ATCAGCCGCCATAGATCGAA+TGG | + | chr4.4:74522976-74522995 | MS.gene48847:CDS | 50.0% | |
| CAATTTGATGCAGCAGGCTC+TGG | + | chr4.4:74521009-74521028 | MS.gene48847:intron | 50.0% | |
| CCAAACCAATACCACTAGGC+GGG | - | chr4.4:74518533-74518552 | None:intergenic | 50.0% | |
| CCCAAACCAATACCACTAGG+CGG | - | chr4.4:74518534-74518553 | None:intergenic | 50.0% | |
| CGATTCTCCCGTGCCAATTT+GGG | + | chr4.4:74518589-74518608 | MS.gene48847:intron | 50.0% | |
| GACTTAGGAATGGCTCGTAC+TGG | + | chr4.4:74518358-74518377 | MS.gene48847:CDS | 50.0% | |
| GAGCTATCCTGGAATGCTCA+TGG | + | chr4.4:74522261-74522280 | MS.gene48847:intron | 50.0% | |
| GAGTGGAAGAGTTTCAAGGG+TGG | - | chr4.4:74518184-74518203 | None:intergenic | 50.0% | |
| GCGCAAGCTTACTCCTATGA+TGG | + | chr4.4:74522687-74522706 | MS.gene48847:intron | 50.0% | |
| GGTCCCAAACCAATACCACT+AGG | - | chr4.4:74518537-74518556 | None:intergenic | 50.0% | |
| GTCGACCATTCGATCTATGG+CGG | - | chr4.4:74522984-74523003 | None:intergenic | 50.0% | |
| GTGATCACTGATGAGAGGGT+TGG | - | chr4.4:74523418-74523437 | None:intergenic | 50.0% | |
| TCGATTCTCCCGTGCCAATT+TGG | + | chr4.4:74518588-74518607 | MS.gene48847:intron | 50.0% | |
| TCTCTCAATAACCCGCCTAG+TGG | + | chr4.4:74518519-74518538 | MS.gene48847:intron | 50.0% | |
| TGAGTGGGTAGAGACATGGA+GGG | - | chr4.4:74519237-74519256 | None:intergenic | 50.0% | |
| TTAGCCCACCCAAATTGGCA+CGG | - | chr4.4:74518600-74518619 | None:intergenic | 50.0% | |
| TTCCAGGTGGCGTTTAGCAT+GGG | + | chr4.4:74519097-74519116 | MS.gene48847:intron | 50.0% | |
| TTGCTAATCGAGCTGCTGAG+AGG | + | chr4.4:74521874-74521893 | MS.gene48847:CDS | 50.0% | |
| TTGGTGAGTGGGTAGAGACA+TGG | - | chr4.4:74519241-74519260 | None:intergenic | 50.0% | |
| TTTCCAGGTGGCGTTTAGCA+TGG | + | chr4.4:74519096-74519115 | MS.gene48847:intron | 50.0% | |
| ! | AAAATGCTCTGGGCTCTGTC+TGG | + | chr4.4:74522134-74522153 | MS.gene48847:intron | 50.0% |
| ! | GGAAATGATGAAGGTGGTGG+TGG | + | chr4.4:74519829-74519848 | MS.gene48847:intron | 50.0% |
| ! | GGCACTGAGTTGACATCTCA+TGG | + | chr4.4:74523794-74523813 | MS.gene48847:intron | 50.0% |
| ! | GGCTCTGGCTCGTTATGAAA+AGG | + | chr4.4:74521024-74521043 | MS.gene48847:intron | 50.0% |
| ! | GGGACCCATTTCAAAAGTGC+GGG | + | chr4.4:74520096-74520115 | MS.gene48847:intron | 50.0% |
| ! | TCAGTGATCACTAGTCTCGG+AGG | + | chr4.4:74523427-74523446 | MS.gene48847:intron | 50.0% |
| !! | CCGCCTAGTGGTATTGGTTT+GGG | + | chr4.4:74518531-74518550 | MS.gene48847:intron | 50.0% |
| ACTGCGAGGACAGAAGCTTG+AGG | + | chr4.4:74521634-74521653 | MS.gene48847:CDS | 55.0% | |
| AGTAAGCTTGCGCAGATGCC+AGG | - | chr4.4:74522680-74522699 | None:intergenic | 55.0% | |
| GAGGACAGAAGCTTGAGGTC+CGG | + | chr4.4:74521639-74521658 | MS.gene48847:CDS | 55.0% | |
| GAGTGGGTAGAGACATGGAG+GGG | - | chr4.4:74519236-74519255 | None:intergenic | 55.0% | |
| GCAGATGCCAGGTGTAAGGA+TGG | - | chr4.4:74522669-74522688 | None:intergenic | 55.0% | |
| GGGGGAAATGATGAAGGTGG+TGG | + | chr4.4:74519826-74519845 | MS.gene48847:intron | 55.0% | |
| GTGAGTGGGTAGAGACATGG+AGG | - | chr4.4:74519238-74519257 | None:intergenic | 55.0% | |
| TAGCCCACCCAAATTGGCAC+GGG | - | chr4.4:74518599-74518618 | None:intergenic | 55.0% | |
| TCCAGGTGGCGTTTAGCATG+GGG | + | chr4.4:74519098-74519117 | MS.gene48847:intron | 55.0% | |
| TCTCCCGTGCCAATTTGGGT+GGG | + | chr4.4:74518593-74518612 | MS.gene48847:intron | 55.0% | |
| TTCTCCCGTGCCAATTTGGG+TGG | + | chr4.4:74518592-74518611 | MS.gene48847:intron | 55.0% | |
| TTCTTCCTCCGAAGCGCGTT+TGG | - | chr4.4:74518301-74518320 | None:intergenic | 55.0% | |
| TTGCGCAGATGCCAGGTGTA+AGG | - | chr4.4:74522673-74522692 | None:intergenic | 55.0% | |
| ! | AGGTGGGTTCTCTCTTGGTG+TGG | + | chr4.4:74518336-74518355 | MS.gene48847:CDS | 55.0% |
| ! | TGGAGAGGTGGGTTCTCTCT+TGG | + | chr4.4:74518331-74518350 | MS.gene48847:CDS | 55.0% |
| !! | CCCGCCTAGTGGTATTGGTT+TGG | + | chr4.4:74518530-74518549 | MS.gene48847:intron | 55.0% |
| !! | GAGAGACTGGTCTGAGATGG+AGG | + | chr4.4:74519853-74519872 | MS.gene48847:intron | 55.0% |
| !! | GGTGAGAGACTGGTCTGAGA+TGG | + | chr4.4:74519850-74519869 | MS.gene48847:intron | 55.0% |
| TCCCCATGCTAAACGCCACC+TGG | - | chr4.4:74519102-74519121 | None:intergenic | 60.0% | |
| TTCCTCCAAACGCGCTTCGG+AGG | + | chr4.4:74518293-74518312 | MS.gene48847:CDS | 60.0% | |
| TTCCTCCGAAGCGCGTTTGG+AGG | - | chr4.4:74518298-74518317 | None:intergenic | 60.0% | |
| !! | AGGTGGTGGTGGTGAGAGAC+TGG | + | chr4.4:74519840-74519859 | MS.gene48847:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 74518148 | 74524083 | 74518148 | ID=MS.gene48847 |
| chr4.4 | mRNA | 74518148 | 74524083 | 74518148 | ID=MS.gene48847.t1;Parent=MS.gene48847 |
| chr4.4 | exon | 74518148 | 74518420 | 74518148 | ID=MS.gene48847.t1.exon1;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74518148 | 74518420 | 74518148 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| chr4.4 | exon | 74521626 | 74521685 | 74521626 | ID=MS.gene48847.t1.exon2;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74521626 | 74521685 | 74521626 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| chr4.4 | exon | 74521783 | 74521895 | 74521783 | ID=MS.gene48847.t1.exon3;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74521783 | 74521895 | 74521783 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| chr4.4 | exon | 74522937 | 74523005 | 74522937 | ID=MS.gene48847.t1.exon4;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74522937 | 74523005 | 74522937 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| chr4.4 | exon | 74523583 | 74523631 | 74523583 | ID=MS.gene48847.t1.exon5;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74523583 | 74523631 | 74523583 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| chr4.4 | exon | 74523952 | 74524083 | 74523952 | ID=MS.gene48847.t1.exon6;Parent=MS.gene48847.t1 |
| chr4.4 | CDS | 74523952 | 74524083 | 74523952 | ID=cds.MS.gene48847.t1;Parent=MS.gene48847.t1 |
| Gene Sequence |
| Protein sequence |
