Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49005.t1 | XP_024625742.1 | 61.9 | 367 | 33 | 1 | 1 | 260 | 1 | 367 | 5.80E-113 | 417.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49005.t1 | Q9LTH7 | 33.0 | 361 | 122 | 5 | 17 | 260 | 9 | 366 | 3.6e-47 | 189.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49005.t1 | A0A072TYT9 | 60.9 | 373 | 33 | 1 | 1 | 260 | 1 | 373 | 2.1e-112 | 414.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05686 | MS.gene49005 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene49005 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene49005 | 0.828959 | 6.73E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49005.t1 | MTR_7g056393 | 83.333 | 180 | 30 | 0 | 1 | 180 | 1 | 180 | 1.39e-105 | 311 |
| MS.gene49005.t1 | MTR_7g056393 | 91.954 | 87 | 7 | 0 | 174 | 260 | 287 | 373 | 2.98e-47 | 161 |
| MS.gene49005.t1 | MTR_4g119410 | 81.111 | 180 | 34 | 0 | 1 | 180 | 1 | 180 | 1.58e-104 | 308 |
| MS.gene49005.t1 | MTR_4g119410 | 90.000 | 80 | 8 | 0 | 181 | 260 | 294 | 373 | 8.85e-43 | 149 |
| MS.gene49005.t1 | MTR_8g006930 | 73.096 | 197 | 53 | 0 | 1 | 197 | 1 | 197 | 1.49e-103 | 305 |
| MS.gene49005.t1 | MTR_8g006930 | 85.185 | 81 | 12 | 0 | 180 | 260 | 293 | 373 | 1.36e-41 | 146 |
| MS.gene49005.t1 | MTR_7g078010 | 72.680 | 194 | 53 | 0 | 1 | 194 | 1 | 194 | 4.72e-103 | 301 |
| MS.gene49005.t1 | MTR_7g078010 | 72.680 | 194 | 53 | 0 | 1 | 194 | 1 | 194 | 5.54e-102 | 301 |
| MS.gene49005.t1 | MTR_7g078010 | 73.563 | 87 | 23 | 0 | 174 | 260 | 287 | 373 | 6.54e-36 | 131 |
| MS.gene49005.t1 | MTR_7g056347 | 67.513 | 197 | 64 | 0 | 1 | 197 | 1 | 197 | 2.39e-91 | 275 |
| MS.gene49005.t1 | MTR_7g056347 | 75.309 | 81 | 20 | 0 | 180 | 260 | 293 | 373 | 2.32e-36 | 132 |
| MS.gene49005.t1 | MTR_8g063070 | 60.000 | 180 | 72 | 0 | 1 | 180 | 1 | 180 | 2.17e-75 | 234 |
| MS.gene49005.t1 | MTR_8g063070 | 58.750 | 80 | 33 | 0 | 181 | 260 | 294 | 373 | 3.15e-24 | 100 |
| MS.gene49005.t1 | MTR_8g062600 | 55.556 | 198 | 88 | 0 | 1 | 198 | 1 | 198 | 1.23e-73 | 229 |
| MS.gene49005.t1 | MTR_8g062600 | 59.770 | 87 | 35 | 0 | 174 | 260 | 287 | 373 | 1.52e-27 | 109 |
| MS.gene49005.t1 | MTR_4g024660 | 60.556 | 180 | 71 | 0 | 1 | 180 | 1 | 180 | 8.15e-73 | 227 |
| MS.gene49005.t1 | MTR_4g024660 | 59.770 | 87 | 35 | 0 | 174 | 260 | 287 | 373 | 1.29e-28 | 112 |
| MS.gene49005.t1 | MTR_1g093120 | 60.335 | 179 | 65 | 3 | 8 | 180 | 2 | 180 | 1.58e-71 | 224 |
| MS.gene49005.t1 | MTR_1g093120 | 68.750 | 80 | 22 | 1 | 181 | 260 | 294 | 370 | 3.95e-30 | 116 |
| MS.gene49005.t1 | MTR_1g093140 | 58.201 | 189 | 67 | 3 | 1 | 180 | 1 | 186 | 4.29e-71 | 223 |
| MS.gene49005.t1 | MTR_1g093140 | 72.500 | 80 | 21 | 1 | 181 | 260 | 300 | 378 | 2.57e-31 | 119 |
| MS.gene49005.t1 | MTR_1g093110 | 56.842 | 190 | 76 | 2 | 11 | 194 | 8 | 197 | 1.84e-70 | 221 |
| MS.gene49005.t1 | MTR_1g093110 | 72.500 | 80 | 20 | 1 | 181 | 260 | 297 | 374 | 5.24e-32 | 121 |
| MS.gene49005.t1 | MTR_7g056370 | 52.941 | 187 | 87 | 1 | 27 | 212 | 6 | 192 | 1.76e-67 | 208 |
| MS.gene49005.t1 | MTR_2g069010 | 58.788 | 165 | 66 | 1 | 17 | 179 | 17 | 181 | 1.27e-62 | 201 |
| MS.gene49005.t1 | MTR_2g069010 | 56.818 | 88 | 36 | 2 | 174 | 260 | 289 | 375 | 8.42e-23 | 96.3 |
| MS.gene49005.t1 | MTR_2g068960 | 57.576 | 165 | 68 | 1 | 17 | 179 | 11 | 175 | 6.14e-62 | 199 |
| MS.gene49005.t1 | MTR_2g068960 | 56.098 | 82 | 34 | 2 | 180 | 260 | 289 | 369 | 4.22e-20 | 88.6 |
| MS.gene49005.t1 | MTR_2g068950 | 58.182 | 165 | 67 | 1 | 17 | 179 | 11 | 175 | 7.42e-62 | 199 |
| MS.gene49005.t1 | MTR_2g068950 | 56.098 | 82 | 34 | 2 | 180 | 260 | 289 | 369 | 3.21e-20 | 89.0 |
| MS.gene49005.t1 | MTR_2g069020 | 56.897 | 174 | 72 | 2 | 17 | 187 | 15 | 188 | 1.33e-61 | 198 |
| MS.gene49005.t1 | MTR_2g069020 | 57.143 | 70 | 28 | 2 | 180 | 249 | 293 | 360 | 7.60e-18 | 82.4 |
| MS.gene49005.t1 | MTR_8g469400 | 54.011 | 187 | 74 | 1 | 1 | 187 | 1 | 175 | 2.94e-61 | 197 |
| MS.gene49005.t1 | MTR_8g469400 | 58.621 | 87 | 36 | 0 | 174 | 260 | 274 | 360 | 3.62e-28 | 110 |
| MS.gene49005.t1 | MTR_2g069020 | 56.897 | 174 | 72 | 2 | 17 | 187 | 15 | 188 | 4.29e-61 | 197 |
| MS.gene49005.t1 | MTR_2g069020 | 57.143 | 70 | 28 | 2 | 180 | 249 | 293 | 360 | 1.07e-17 | 82.0 |
| MS.gene49005.t1 | MTR_4g099380 | 54.268 | 164 | 68 | 2 | 19 | 180 | 124 | 282 | 1.34e-57 | 185 |
| MS.gene49005.t1 | MTR_2g069060 | 47.087 | 206 | 79 | 2 | 1 | 194 | 1 | 188 | 9.53e-57 | 185 |
| MS.gene49005.t1 | MTR_2g069060 | 60.494 | 81 | 26 | 2 | 180 | 260 | 275 | 349 | 1.66e-23 | 97.8 |
| MS.gene49005.t1 | MTR_2g069070 | 47.449 | 196 | 85 | 1 | 1 | 196 | 1 | 178 | 5.32e-54 | 173 |
| MS.gene49005.t1 | MTR_8g041600 | 40.102 | 197 | 115 | 2 | 1 | 194 | 1 | 197 | 6.15e-52 | 171 |
| MS.gene49005.t1 | MTR_8g041620 | 41.117 | 197 | 113 | 2 | 1 | 194 | 1 | 197 | 6.66e-52 | 173 |
| MS.gene49005.t1 | MTR_8g041620 | 56.790 | 81 | 33 | 2 | 180 | 260 | 296 | 374 | 1.53e-22 | 95.5 |
| MS.gene49005.t1 | MTR_8g041600 | 40.102 | 197 | 115 | 2 | 1 | 194 | 1 | 197 | 2.72e-51 | 172 |
| MS.gene49005.t1 | MTR_8g041600 | 59.259 | 81 | 31 | 2 | 180 | 260 | 296 | 374 | 8.68e-24 | 99.0 |
| MS.gene49005.t1 | MTR_8g009080 | 45.856 | 181 | 97 | 1 | 1 | 180 | 27 | 207 | 1.86e-48 | 163 |
| MS.gene49005.t1 | MTR_8g009080 | 45.856 | 181 | 97 | 1 | 1 | 180 | 27 | 207 | 2.64e-48 | 163 |
| MS.gene49005.t1 | MTR_8g009080 | 45.856 | 181 | 97 | 1 | 1 | 180 | 27 | 207 | 6.72e-48 | 163 |
| MS.gene49005.t1 | MTR_8g009080 | 50.617 | 81 | 37 | 1 | 180 | 260 | 320 | 397 | 9.93e-20 | 87.8 |
| MS.gene49005.t1 | MTR_8g009090 | 43.750 | 192 | 98 | 4 | 6 | 194 | 4 | 188 | 1.18e-47 | 162 |
| MS.gene49005.t1 | MTR_8g009090 | 55.556 | 81 | 33 | 1 | 180 | 260 | 287 | 364 | 1.08e-21 | 93.2 |
| MS.gene49005.t1 | MTR_8g008930 | 43.299 | 194 | 99 | 5 | 5 | 194 | 3 | 189 | 1.81e-46 | 159 |
| MS.gene49005.t1 | MTR_8g008930 | 51.852 | 81 | 36 | 1 | 180 | 260 | 288 | 365 | 7.76e-20 | 87.8 |
| MS.gene49005.t1 | MTR_2g069210 | 44.000 | 175 | 89 | 2 | 11 | 180 | 7 | 177 | 3.20e-45 | 155 |
| MS.gene49005.t1 | MTR_2g069210 | 61.728 | 81 | 28 | 1 | 180 | 260 | 290 | 367 | 2.60e-22 | 94.7 |
| MS.gene49005.t1 | MTR_8g028435 | 42.614 | 176 | 94 | 3 | 22 | 194 | 17 | 188 | 1.52e-44 | 154 |
| MS.gene49005.t1 | MTR_8g028435 | 56.790 | 81 | 32 | 1 | 180 | 260 | 287 | 364 | 6.17e-24 | 99.4 |
| MS.gene49005.t1 | MTR_1g043760 | 44.785 | 163 | 89 | 1 | 18 | 180 | 5 | 166 | 2.05e-44 | 153 |
| MS.gene49005.t1 | MTR_1g043760 | 45.946 | 74 | 37 | 1 | 180 | 253 | 279 | 349 | 1.28e-12 | 67.0 |
| MS.gene49005.t1 | MTR_2g069300 | 45.455 | 165 | 87 | 2 | 18 | 180 | 4 | 167 | 3.87e-44 | 152 |
| MS.gene49005.t1 | MTR_2g069300 | 51.852 | 81 | 36 | 1 | 180 | 260 | 281 | 358 | 3.79e-18 | 83.2 |
| MS.gene49005.t1 | MTR_1g070185 | 44.242 | 165 | 89 | 2 | 17 | 180 | 18 | 180 | 8.91e-44 | 152 |
| MS.gene49005.t1 | MTR_1g070185 | 41.975 | 81 | 41 | 1 | 180 | 260 | 293 | 367 | 1.46e-11 | 63.9 |
| MS.gene49005.t1 | MTR_2g069060 | 48.649 | 148 | 64 | 1 | 59 | 194 | 19 | 166 | 2.17e-43 | 148 |
| MS.gene49005.t1 | MTR_1g044105 | 42.857 | 168 | 89 | 3 | 18 | 179 | 5 | 171 | 2.20e-43 | 145 |
| MS.gene49005.t1 | MTR_8g009170 | 41.243 | 177 | 96 | 4 | 22 | 194 | 17 | 189 | 5.71e-43 | 148 |
| MS.gene49005.t1 | MTR_8g009160 | 41.243 | 177 | 97 | 3 | 21 | 194 | 16 | 188 | 1.57e-42 | 149 |
| MS.gene49005.t1 | MTR_8g009160 | 51.852 | 81 | 36 | 1 | 180 | 260 | 287 | 364 | 1.63e-21 | 92.4 |
| MS.gene49005.t1 | MTR_8g009170 | 41.243 | 177 | 96 | 4 | 22 | 194 | 17 | 189 | 1.72e-42 | 149 |
| MS.gene49005.t1 | MTR_8g009170 | 54.878 | 82 | 33 | 2 | 180 | 260 | 288 | 366 | 6.72e-22 | 93.6 |
| MS.gene49005.t1 | MTR_8g009110 | 40.341 | 176 | 101 | 4 | 21 | 194 | 16 | 189 | 4.32e-42 | 147 |
| MS.gene49005.t1 | MTR_8g009110 | 54.321 | 81 | 34 | 1 | 180 | 260 | 288 | 365 | 1.84e-21 | 92.4 |
| MS.gene49005.t1 | MTR_1g043770 | 41.860 | 172 | 96 | 3 | 13 | 184 | 2 | 169 | 1.80e-41 | 144 |
| MS.gene49005.t1 | MTR_1g043770 | 41.860 | 172 | 96 | 3 | 13 | 184 | 2 | 169 | 3.25e-41 | 145 |
| MS.gene49005.t1 | MTR_1g043770 | 44.444 | 81 | 42 | 1 | 180 | 260 | 278 | 355 | 5.06e-15 | 73.9 |
| MS.gene49005.t1 | MTR_2g069190 | 43.182 | 176 | 97 | 2 | 7 | 180 | 7 | 181 | 1.19e-40 | 144 |
| MS.gene49005.t1 | MTR_2g069190 | 55.952 | 84 | 28 | 2 | 180 | 260 | 294 | 371 | 8.74e-21 | 90.5 |
| MS.gene49005.t1 | MTR_8g009150 | 41.243 | 177 | 96 | 4 | 22 | 194 | 17 | 189 | 1.28e-40 | 143 |
| MS.gene49005.t1 | MTR_8g009150 | 50.617 | 81 | 37 | 1 | 180 | 260 | 268 | 345 | 1.94e-19 | 86.7 |
| MS.gene49005.t1 | MTR_2g069090 | 39.175 | 194 | 109 | 2 | 6 | 194 | 6 | 195 | 1.52e-40 | 144 |
| MS.gene49005.t1 | MTR_2g069090 | 59.259 | 81 | 30 | 1 | 180 | 260 | 295 | 372 | 1.29e-22 | 95.9 |
| MS.gene49005.t1 | MTR_1g043810 | 41.463 | 164 | 94 | 2 | 18 | 180 | 5 | 167 | 6.41e-40 | 141 |
| MS.gene49005.t1 | MTR_1g043810 | 41.463 | 164 | 94 | 2 | 18 | 180 | 5 | 167 | 1.24e-39 | 140 |
| MS.gene49005.t1 | MTR_1g043810 | 50.667 | 75 | 34 | 1 | 181 | 255 | 281 | 352 | 9.18e-17 | 79.0 |
| MS.gene49005.t1 | MTR_4g117880 | 42.328 | 189 | 100 | 5 | 11 | 194 | 5 | 189 | 1.90e-39 | 140 |
| MS.gene49005.t1 | MTR_4g117880 | 48.780 | 82 | 38 | 2 | 180 | 260 | 288 | 366 | 1.30e-15 | 75.9 |
| MS.gene49005.t1 | MTR_8g009120 | 43.827 | 162 | 83 | 4 | 22 | 179 | 17 | 174 | 2.22e-39 | 140 |
| MS.gene49005.t1 | MTR_8g009120 | 54.217 | 83 | 35 | 1 | 178 | 260 | 274 | 353 | 2.62e-22 | 94.7 |
| MS.gene49005.t1 | MTR_0032s0040 | 39.691 | 194 | 102 | 5 | 12 | 194 | 7 | 196 | 5.31e-39 | 139 |
| MS.gene49005.t1 | MTR_0032s0040 | 58.025 | 81 | 30 | 2 | 181 | 260 | 296 | 373 | 5.91e-19 | 85.5 |
| MS.gene49005.t1 | MTR_7g029655 | 37.640 | 178 | 103 | 2 | 12 | 184 | 7 | 181 | 6.98e-38 | 136 |
| MS.gene49005.t1 | MTR_7g029655 | 53.933 | 89 | 37 | 3 | 174 | 260 | 284 | 370 | 1.80e-18 | 84.0 |
| MS.gene49005.t1 | MTR_7g105070 | 41.916 | 167 | 95 | 2 | 15 | 180 | 6 | 171 | 8.37e-38 | 136 |
| MS.gene49005.t1 | MTR_7g105070 | 41.975 | 81 | 43 | 2 | 181 | 260 | 285 | 362 | 2.04e-11 | 63.5 |
| MS.gene49005.t1 | MTR_1g043775 | 40.854 | 164 | 95 | 2 | 18 | 180 | 5 | 167 | 1.35e-37 | 134 |
| MS.gene49005.t1 | MTR_1g043775 | 40.854 | 164 | 95 | 2 | 18 | 180 | 5 | 167 | 2.71e-37 | 134 |
| MS.gene49005.t1 | MTR_1g043775 | 49.333 | 75 | 35 | 1 | 181 | 255 | 281 | 352 | 1.60e-15 | 75.5 |
| MS.gene49005.t1 | MTR_1g032220 | 41.317 | 167 | 91 | 4 | 17 | 180 | 21 | 183 | 2.33e-36 | 132 |
| MS.gene49005.t1 | MTR_1g032250 | 38.889 | 180 | 101 | 5 | 6 | 180 | 8 | 183 | 1.98e-34 | 127 |
| MS.gene49005.t1 | MTR_1g032140 | 40.120 | 167 | 93 | 4 | 17 | 180 | 14 | 176 | 2.83e-34 | 127 |
| MS.gene49005.t1 | MTR_4g099390 | 70.000 | 80 | 23 | 1 | 181 | 260 | 6 | 84 | 2.21e-33 | 117 |
| MS.gene49005.t1 | MTR_7g056353 | 38.172 | 186 | 86 | 4 | 6 | 190 | 8 | 165 | 1.80e-31 | 121 |
| MS.gene49005.t1 | MTR_7g056353 | 63.291 | 79 | 29 | 0 | 181 | 259 | 268 | 346 | 3.72e-25 | 103 |
| MS.gene49005.t1 | MTR_8g008960 | 50.667 | 75 | 34 | 1 | 186 | 260 | 31 | 102 | 4.56e-21 | 85.5 |
| MS.gene49005.t1 | MTR_2g069130 | 51.579 | 95 | 40 | 2 | 71 | 163 | 12 | 102 | 1.07e-20 | 85.5 |
| MS.gene49005.t1 | MTR_8g009180 | 51.316 | 76 | 34 | 1 | 180 | 255 | 217 | 289 | 7.02e-19 | 84.3 |
| MS.gene49005.t1 | MTR_1g062110 | 32.168 | 143 | 90 | 4 | 32 | 169 | 26 | 166 | 5.01e-16 | 77.0 |
| MS.gene49005.t1 | MTR_1g062110 | 32.168 | 143 | 90 | 4 | 32 | 169 | 26 | 166 | 5.13e-16 | 76.6 |
| MS.gene49005.t1 | MTR_1g032230 | 32.877 | 146 | 72 | 4 | 12 | 154 | 10 | 132 | 4.73e-15 | 73.2 |
| MS.gene49005.t1 | MTR_7g102820 | 32.432 | 148 | 85 | 7 | 32 | 169 | 25 | 167 | 1.03e-14 | 73.6 |
| MS.gene49005.t1 | MTR_3g091350 | 28.261 | 184 | 105 | 7 | 1 | 172 | 1 | 169 | 3.96e-12 | 65.9 |
| MS.gene49005.t1 | MTR_7g068650 | 29.310 | 116 | 76 | 2 | 23 | 132 | 5 | 120 | 5.60e-12 | 65.5 |
| MS.gene49005.t1 | MTR_5g055820 | 28.105 | 153 | 95 | 5 | 32 | 178 | 12 | 155 | 7.68e-12 | 64.7 |
| MS.gene49005.t1 | MTR_1g043840 | 39.726 | 73 | 43 | 1 | 78 | 150 | 257 | 328 | 4.46e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49005.t1 | AT1G06650 | 44.809 | 183 | 96 | 2 | 17 | 194 | 10 | 192 | 2.63e-50 | 167 |
| MS.gene49005.t1 | AT1G06650 | 44.809 | 183 | 96 | 2 | 17 | 194 | 10 | 192 | 1.30e-49 | 167 |
| MS.gene49005.t1 | AT1G06650 | 48.780 | 82 | 38 | 2 | 180 | 260 | 291 | 369 | 1.46e-16 | 78.6 |
| MS.gene49005.t1 | AT1G06640 | 45.856 | 181 | 91 | 3 | 11 | 184 | 2 | 182 | 6.48e-49 | 163 |
| MS.gene49005.t1 | AT1G06640 | 46.471 | 170 | 86 | 2 | 16 | 180 | 9 | 178 | 1.42e-48 | 163 |
| MS.gene49005.t1 | AT2G30840 | 50.296 | 169 | 80 | 2 | 15 | 179 | 3 | 171 | 3.60e-48 | 162 |
| MS.gene49005.t1 | AT1G06640 | 45.977 | 174 | 89 | 2 | 16 | 184 | 9 | 182 | 4.07e-48 | 163 |
| MS.gene49005.t1 | AT1G06640 | 47.561 | 82 | 39 | 2 | 180 | 260 | 291 | 369 | 2.01e-15 | 75.5 |
| MS.gene49005.t1 | AT2G30840 | 50.296 | 169 | 80 | 2 | 15 | 179 | 3 | 171 | 7.36e-48 | 162 |
| MS.gene49005.t1 | AT2G30840 | 55.682 | 88 | 32 | 4 | 175 | 260 | 274 | 356 | 2.19e-18 | 84.0 |
| MS.gene49005.t1 | AT2G30840 | 50.296 | 169 | 80 | 2 | 15 | 179 | 3 | 171 | 7.86e-48 | 162 |
| MS.gene49005.t1 | AT2G30840 | 57.831 | 83 | 28 | 4 | 180 | 260 | 285 | 362 | 5.44e-18 | 82.8 |
| MS.gene49005.t1 | AT1G06620 | 46.386 | 166 | 88 | 1 | 15 | 179 | 9 | 174 | 7.91e-48 | 160 |
| MS.gene49005.t1 | AT2G30830 | 49.091 | 165 | 82 | 2 | 17 | 180 | 5 | 168 | 2.39e-47 | 161 |
| MS.gene49005.t1 | AT2G30830 | 50.602 | 83 | 34 | 3 | 180 | 260 | 281 | 358 | 2.29e-15 | 75.1 |
| MS.gene49005.t1 | AT1G06620 | 46.386 | 166 | 88 | 1 | 15 | 179 | 9 | 174 | 5.65e-47 | 160 |
| MS.gene49005.t1 | AT1G06620 | 53.947 | 76 | 32 | 1 | 180 | 255 | 288 | 360 | 7.32e-18 | 82.4 |
| MS.gene49005.t1 | AT2G25450 | 43.558 | 163 | 92 | 0 | 17 | 179 | 5 | 167 | 9.78e-46 | 157 |
| MS.gene49005.t1 | AT2G25450 | 51.807 | 83 | 34 | 4 | 180 | 260 | 281 | 359 | 1.17e-13 | 70.1 |
| MS.gene49005.t1 | AT1G03410 | 43.976 | 166 | 89 | 2 | 18 | 179 | 5 | 170 | 5.42e-44 | 152 |
| MS.gene49005.t1 | AT1G03410 | 42.529 | 174 | 96 | 2 | 10 | 179 | 34 | 207 | 1.31e-43 | 152 |
| MS.gene49005.t1 | AT1G06645 | 45.912 | 159 | 81 | 2 | 16 | 169 | 22 | 180 | 4.56e-43 | 150 |
| MS.gene49005.t1 | AT1G06645 | 48.780 | 82 | 38 | 2 | 180 | 260 | 301 | 379 | 1.20e-16 | 79.0 |
| MS.gene49005.t1 | AT5G59540 | 42.857 | 168 | 92 | 3 | 17 | 180 | 9 | 176 | 3.48e-42 | 145 |
| MS.gene49005.t1 | AT5G59540 | 42.857 | 168 | 92 | 3 | 17 | 180 | 9 | 176 | 1.48e-41 | 146 |
| MS.gene49005.t1 | AT5G59540 | 58.025 | 81 | 31 | 1 | 180 | 260 | 289 | 366 | 5.43e-22 | 94.0 |
| MS.gene49005.t1 | AT1G03400 | 37.363 | 182 | 104 | 2 | 18 | 197 | 5 | 178 | 1.42e-39 | 140 |
| MS.gene49005.t1 | AT1G03400 | 37.363 | 182 | 104 | 2 | 18 | 197 | 5 | 178 | 4.77e-39 | 140 |
| MS.gene49005.t1 | AT5G59530 | 39.521 | 167 | 98 | 3 | 17 | 180 | 8 | 174 | 1.55e-38 | 138 |
| MS.gene49005.t1 | AT5G59530 | 55.556 | 81 | 33 | 1 | 180 | 260 | 287 | 364 | 2.31e-21 | 92.0 |
| MS.gene49005.t1 | AT1G04350 | 38.922 | 167 | 96 | 3 | 17 | 180 | 6 | 169 | 1.73e-38 | 138 |
| MS.gene49005.t1 | AT1G04350 | 53.659 | 82 | 34 | 2 | 180 | 260 | 282 | 360 | 1.21e-17 | 81.6 |
| MS.gene49005.t1 | AT3G61400 | 31.282 | 195 | 128 | 2 | 9 | 197 | 1 | 195 | 3.98e-35 | 127 |
| MS.gene49005.t1 | AT3G61400 | 31.282 | 195 | 128 | 2 | 9 | 197 | 1 | 195 | 1.99e-34 | 127 |
| MS.gene49005.t1 | AT3G61400 | 44.578 | 83 | 42 | 2 | 174 | 255 | 287 | 366 | 2.47e-13 | 69.3 |
| MS.gene49005.t1 | AT5G43440 | 38.012 | 171 | 100 | 4 | 19 | 184 | 10 | 179 | 1.10e-33 | 124 |
| MS.gene49005.t1 | AT5G43440 | 38.012 | 171 | 100 | 4 | 19 | 184 | 10 | 179 | 3.84e-33 | 124 |
| MS.gene49005.t1 | AT5G43440 | 49.383 | 81 | 38 | 1 | 180 | 260 | 288 | 365 | 3.43e-15 | 74.7 |
| MS.gene49005.t1 | AT5G43450 | 37.952 | 166 | 98 | 3 | 18 | 180 | 9 | 172 | 5.19e-33 | 122 |
| MS.gene49005.t1 | AT5G43450 | 37.952 | 166 | 98 | 3 | 18 | 180 | 9 | 172 | 1.47e-32 | 122 |
| MS.gene49005.t1 | AT5G43450 | 52.632 | 76 | 33 | 1 | 180 | 255 | 285 | 357 | 1.82e-14 | 72.8 |
| MS.gene49005.t1 | AT1G04380 | 36.691 | 139 | 84 | 2 | 42 | 180 | 21 | 155 | 1.01e-26 | 105 |
| MS.gene49005.t1 | AT1G04380 | 36.691 | 139 | 84 | 2 | 42 | 180 | 21 | 155 | 2.28e-26 | 105 |
| MS.gene49005.t1 | AT1G04380 | 55.556 | 81 | 33 | 1 | 180 | 260 | 268 | 345 | 2.55e-21 | 91.7 |
| MS.gene49005.t1 | AT2G44800 | 27.273 | 143 | 101 | 2 | 19 | 159 | 2 | 143 | 7.58e-13 | 67.8 |
| MS.gene49005.t1 | AT2G36690 | 30.556 | 144 | 92 | 4 | 32 | 169 | 20 | 161 | 1.67e-12 | 67.0 |
| MS.gene49005.t1 | AT2G36690 | 30.556 | 144 | 92 | 4 | 32 | 169 | 20 | 161 | 1.67e-12 | 67.0 |
| MS.gene49005.t1 | AT3G60290 | 30.952 | 126 | 84 | 2 | 36 | 159 | 19 | 143 | 1.73e-11 | 63.9 |
| MS.gene49005.t1 | AT4G10490 | 33.036 | 112 | 73 | 2 | 66 | 177 | 41 | 150 | 1.93e-11 | 63.5 |
| MS.gene49005.t1 | AT5G24530 | 29.801 | 151 | 86 | 4 | 41 | 187 | 23 | 157 | 4.43e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTGATCTCCAACTTTC+CGG | 0.217968 | 7.3:+48557026 | None:intergenic |
| AAAGGTTTATGGTCCTATTA+AGG | 0.275771 | 7.3:-48555176 | MS.gene49005:CDS |
| CGAAATTTCCACTATTATCT+TGG | 0.281145 | 7.3:-48556863 | MS.gene49005:CDS |
| GTCAGAGGATTGGTAGAGTC+TGG | 0.290115 | 7.3:-48557078 | MS.gene49005:CDS |
| GAAGGTACATCAAAGGTTTA+TGG | 0.290841 | 7.3:-48555187 | MS.gene49005:CDS |
| TTAGCGGCCAAGCTGCTAAT+TGG | 0.291740 | 7.3:-48556726 | MS.gene49005:CDS |
| CATATGGATGGTAGTTCATT+TGG | 0.297189 | 7.3:+48556661 | None:intergenic |
| TCTGAAAGGAGCTCCTTAAT+AGG | 0.307082 | 7.3:+48555163 | None:intergenic |
| CATGGCATGCGGTTCGAATT+TGG | 0.319624 | 7.3:+48556914 | None:intergenic |
| AAGCTTGCTACCGAAATTCT+TGG | 0.320171 | 7.3:+48555235 | None:intergenic |
| CCTAGATGGAAACTCTTTCT+TGG | 0.320238 | 7.3:-48555074 | MS.gene49005:CDS |
| GGTAGTTCATTTGGTTTGAA+TGG | 0.352643 | 7.3:+48556670 | None:intergenic |
| GAACATTGGCCCAAGAATTT+CGG | 0.356167 | 7.3:-48555245 | MS.gene49005:CDS |
| GATTGATGTGTATGTCTTTG+AGG | 0.364574 | 7.3:+48556962 | None:intergenic |
| CTTAGTTAATTACCTGCATA+TGG | 0.366858 | 7.3:+48556645 | None:intergenic |
| TATTATGCAAAAGGCCTAGA+TGG | 0.373788 | 7.3:-48555088 | MS.gene49005:CDS |
| ATGGTAATGTCTTTGTAGAT+TGG | 0.378270 | 7.3:+48555130 | None:intergenic |
| TCTATCATAAGTGGAATTAG+TGG | 0.395303 | 7.3:+48557140 | None:intergenic |
| ACCTTTGATGTACCTTCAAT+TGG | 0.399600 | 7.3:+48555193 | None:intergenic |
| ATCTTGGATGAAATGATTGA+TGG | 0.408517 | 7.3:-48556847 | MS.gene49005:CDS |
| GGTAGAAAACACAAATCAAT+TGG | 0.412811 | 7.3:-48557169 | MS.gene49005:CDS |
| TATGTCTTTGAGGTCTATAA+TGG | 0.413542 | 7.3:+48556972 | None:intergenic |
| TTTGCACATTATTATGCAAA+AGG | 0.427901 | 7.3:-48555097 | MS.gene49005:CDS |
| AGCTTGCTACCGAAATTCTT+GGG | 0.447441 | 7.3:+48555236 | None:intergenic |
| TCAGAGGATTGGTAGAGTCT+GGG | 0.462084 | 7.3:-48557077 | MS.gene49005:CDS |
| ATGTTGAATTCACAACTTGA+AGG | 0.473909 | 7.3:+48555048 | None:intergenic |
| TCCAATGGAACCTTGTTTAG+CGG | 0.475131 | 7.3:-48556742 | MS.gene49005:CDS |
| TCATTTGGTTTGAATGGATG+AGG | 0.483777 | 7.3:+48556676 | None:intergenic |
| GCCGCTAAACAAGGTTCCAT+TGG | 0.487811 | 7.3:+48556741 | None:intergenic |
| CCAAGAAAGAGTTTCCATCT+AGG | 0.487963 | 7.3:+48555074 | None:intergenic |
| GTAATGTCTTTGTAGATTGG+AGG | 0.488313 | 7.3:+48555133 | None:intergenic |
| AAAGTTATGTATTTCTCCAA+TGG | 0.490517 | 7.3:-48556757 | MS.gene49005:CDS |
| CAATCCAGCTCTACGTATAG+AGG | 0.493480 | 7.3:-48556944 | MS.gene49005:CDS |
| AAAAGTTGGTGTCAGAGGAT+TGG | 0.504230 | 7.3:-48557088 | MS.gene49005:CDS |
| CATTTCATCCAAGATAATAG+TGG | 0.505113 | 7.3:+48556855 | None:intergenic |
| ATGTCTTTGAGGTCTATAAT+GGG | 0.505465 | 7.3:+48556973 | None:intergenic |
| AATTCTCATGAACCAATTGA+AGG | 0.506027 | 7.3:-48555205 | MS.gene49005:CDS |
| TATAATGGGAACACTCAACT+TGG | 0.531180 | 7.3:+48556987 | None:intergenic |
| GTTAATTACCTGCATATGGA+TGG | 0.532420 | 7.3:+48556649 | None:intergenic |
| ATCACCTCTATACGTAGAGC+TGG | 0.533602 | 7.3:+48556940 | None:intergenic |
| TAATGTCTTTGTAGATTGGA+GGG | 0.537461 | 7.3:+48555134 | None:intergenic |
| ATGAACTACCATCCATATGC+AGG | 0.538470 | 7.3:-48556657 | MS.gene49005:intron |
| TTCGAACCGCATGCCATGAG+TGG | 0.545312 | 7.3:-48556909 | MS.gene49005:CDS |
| AGCAGCTTGGCCGCTAAACA+AGG | 0.553269 | 7.3:+48556732 | None:intergenic |
| GATGAAATGATTGATGGAAT+CGG | 0.555039 | 7.3:-48556841 | MS.gene49005:CDS |
| TATCTCTCCAATTAGCAGCT+TGG | 0.556726 | 7.3:+48556719 | None:intergenic |
| CAATGTTCTGTGATAAGACT+CGG | 0.558348 | 7.3:+48555260 | None:intergenic |
| TGTTGAATTCACAACTTGAA+GGG | 0.564135 | 7.3:+48555049 | None:intergenic |
| TCGAACCGCATGCCATGAGT+GGG | 0.565520 | 7.3:-48556908 | MS.gene49005:CDS |
| GATTCAAAAGTTGGTGTCAG+AGG | 0.566152 | 7.3:-48557093 | MS.gene49005:CDS |
| ACCAATTGAAGGTACATCAA+AGG | 0.570655 | 7.3:-48555194 | MS.gene49005:CDS |
| AGAAAACACAAATCAATTGG+AGG | 0.577651 | 7.3:-48557166 | MS.gene49005:CDS |
| CAGAGGATTGGTAGAGTCTG+GGG | 0.587912 | 7.3:-48557076 | MS.gene49005:CDS |
| GCTAATTGGAGAGATACACT+TGG | 0.617281 | 7.3:-48556712 | MS.gene49005:CDS |
| TTTGAATGGATGAGGAGCAA+CGG | 0.642538 | 7.3:+48556684 | None:intergenic |
| CGAGTCTTATCACAGAACAT+TGG | 0.652569 | 7.3:-48555259 | MS.gene49005:CDS |
| AAATCCCCACTCATGGCATG+CGG | 0.677597 | 7.3:+48556903 | None:intergenic |
| CGAACCGCATGCCATGAGTG+GGG | 0.694194 | 7.3:-48556907 | MS.gene49005:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTCATTATAAATTGAT+GGG | + | chr7.3:48555629-48555648 | None:intergenic | 15.0% |
| !! | AAAATATTCCCAAAAAATAA+GGG | - | chr7.3:48556262-48556281 | MS.gene49005:intron | 15.0% |
| !! | AAATCAAACATTAATAGATA+TGG | - | chr7.3:48556008-48556027 | MS.gene49005:intron | 15.0% |
| !! | ATAAAATATTCCAAAAGATA+AGG | - | chr7.3:48556201-48556220 | MS.gene49005:intron | 15.0% |
| !! | TAAAATATTCCAAAAGATAA+GGG | - | chr7.3:48556202-48556221 | MS.gene49005:intron | 15.0% |
| !! | TAAAATATTCCCAAAAAATA+AGG | - | chr7.3:48556261-48556280 | MS.gene49005:intron | 15.0% |
| !!! | ATCAGTTATATTTTTTTGTA+AGG | + | chr7.3:48556734-48556753 | None:intergenic | 15.0% |
| !!! | TCAGTTATATTTTTTTGTAA+GGG | + | chr7.3:48556733-48556752 | None:intergenic | 15.0% |
| !! | AGTAATATACTAATATGCAA+TGG | + | chr7.3:48556788-48556807 | None:intergenic | 20.0% |
| !! | CATAATCTTTGAATTATTGT+CGG | - | chr7.3:48556295-48556314 | MS.gene49005:intron | 20.0% |
| !! | GAAAACTCATTATAAATTGA+TGG | + | chr7.3:48555630-48555649 | None:intergenic | 20.0% |
| !! | TAATTTGAAGGAAAAAAACT+CGG | - | chr7.3:48555945-48555964 | MS.gene49005:intron | 20.0% |
| ! | AAAGTTATGTATTTCTCCAA+TGG | - | chr7.3:48555474-48555493 | MS.gene49005:intron | 25.0% |
| ! | AATTATAATTGTCCTCAAGA+CGG | - | chr7.3:48556678-48556697 | MS.gene49005:CDS | 25.0% |
| ! | ATTATAGTGAACTGCAATTA+TGG | - | chr7.3:48556819-48556838 | MS.gene49005:CDS | 25.0% |
| ! | TAACTACGAGTATAATTTGA+AGG | - | chr7.3:48555933-48555952 | MS.gene49005:intron | 25.0% |
| ! | TTATAGTGAACTGCAATTAT+GGG | - | chr7.3:48556820-48556839 | MS.gene49005:CDS | 25.0% |
| ! | TTCAAATTATACTCGTAGTT+AGG | + | chr7.3:48555934-48555953 | None:intergenic | 25.0% |
| ! | TTGACTTAAACAATGACAAA+GGG | + | chr7.3:48556587-48556606 | None:intergenic | 25.0% |
| ! | TTTCAAATGGACATGATATA+TGG | + | chr7.3:48556159-48556178 | None:intergenic | 25.0% |
| ! | TTTGCACATTATTATGCAAA+AGG | - | chr7.3:48557134-48557153 | MS.gene49005:CDS | 25.0% |
| !! | ATGTGCAAAGAAATCTTTTA+TGG | + | chr7.3:48557123-48557142 | None:intergenic | 25.0% |
| !! | ATTGACTTAAACAATGACAA+AGG | + | chr7.3:48556588-48556607 | None:intergenic | 25.0% |
| !! | CATTTGAAATATTCCCAAAA+GGG | - | chr7.3:48556170-48556189 | MS.gene49005:intron | 25.0% |
| !! | TGAAGTTATGCATAATCTTT+TGG | - | chr7.3:48556612-48556631 | MS.gene49005:intron | 25.0% |
| !!! | TTAGGAAAATGCTATTTCAA+GGG | - | chr7.3:48555659-48555678 | MS.gene49005:intron | 25.0% |
| !!! | TTTAGGAAAATGCTATTTCA+AGG | - | chr7.3:48555658-48555677 | MS.gene49005:intron | 25.0% |
| AAAGAGTTGAATTGTTGTGA+AGG | - | chr7.3:48556347-48556366 | MS.gene49005:intron | 30.0% | |
| AAAGGTTTATGGTCCTATTA+AGG | - | chr7.3:48557055-48557074 | MS.gene49005:CDS | 30.0% | |
| AAGTTCTTCATGAGGATAAA+TGG | - | chr7.3:48556492-48556511 | MS.gene49005:intron | 30.0% | |
| AATCTTTGAATTATTGTCGG+AGG | - | chr7.3:48556298-48556317 | MS.gene49005:intron | 30.0% | |
| AATTCTCATGAACCAATTGA+AGG | - | chr7.3:48557026-48557045 | MS.gene49005:CDS | 30.0% | |
| AGAAAACACAAATCAATTGG+AGG | - | chr7.3:48555065-48555084 | MS.gene49005:CDS | 30.0% | |
| ATCTTGGATGAAATGATTGA+TGG | - | chr7.3:48555384-48555403 | MS.gene49005:intron | 30.0% | |
| ATTCCAAAAGATAAGGGATT+TGG | - | chr7.3:48556208-48556227 | MS.gene49005:intron | 30.0% | |
| CATTTCATCCAAGATAATAG+TGG | + | chr7.3:48555379-48555398 | None:intergenic | 30.0% | |
| CGAAATTTCCACTATTATCT+TGG | - | chr7.3:48555368-48555387 | MS.gene49005:intron | 30.0% | |
| CTTAGTTAATTACCTGCATA+TGG | + | chr7.3:48555589-48555608 | None:intergenic | 30.0% | |
| GAAGACTCATGAATGTATAA+TGG | + | chr7.3:48555908-48555927 | None:intergenic | 30.0% | |
| GATGAAATGATTGATGGAAT+CGG | - | chr7.3:48555390-48555409 | MS.gene49005:intron | 30.0% | |
| GGTAGAAAACACAAATCAAT+TGG | - | chr7.3:48555062-48555081 | MS.gene49005:CDS | 30.0% | |
| TAACACCTTCAAGAACTTTA+TGG | - | chr7.3:48556042-48556061 | MS.gene49005:intron | 30.0% | |
| TAACATTGTTGAAGGGAATA+TGG | + | chr7.3:48556704-48556723 | None:intergenic | 30.0% | |
| TAATGTCTTTGTAGATTGGA+GGG | + | chr7.3:48557100-48557119 | None:intergenic | 30.0% | |
| TCCCAAAAAATAAGGGATTT+GGG | - | chr7.3:48556269-48556288 | MS.gene49005:intron | 30.0% | |
| TCTATCATAAGTGGAATTAG+TGG | + | chr7.3:48555094-48555113 | None:intergenic | 30.0% | |
| TTACTTCTACAAGATCAACT+TGG | - | chr7.3:48556461-48556480 | MS.gene49005:intron | 30.0% | |
| TTCCAAAAGATAAGGGATTT+GGG | - | chr7.3:48556209-48556228 | MS.gene49005:intron | 30.0% | |
| TTCCCAAAAAATAAGGGATT+TGG | - | chr7.3:48556268-48556287 | MS.gene49005:intron | 30.0% | |
| ! | ATGGTAATGTCTTTGTAGAT+TGG | + | chr7.3:48557104-48557123 | None:intergenic | 30.0% |
| ! | CCATTTGAAATATTCCCAAA+AGG | - | chr7.3:48556169-48556188 | MS.gene49005:intron | 30.0% |
| ! | GTCTTGTTAACATTGTTGAA+GGG | + | chr7.3:48556711-48556730 | None:intergenic | 30.0% |
| ! | TTCAGCTTTTCTATCATAAG+TGG | + | chr7.3:48555103-48555122 | None:intergenic | 30.0% |
| ! | TTTATCACACTATCCCTTTT+GGG | + | chr7.3:48556186-48556205 | None:intergenic | 30.0% |
| ! | TTTTATCACACTATCCCTTT+TGG | + | chr7.3:48556187-48556206 | None:intergenic | 30.0% |
| !! | ATGTCTTTGAGGTCTATAAT+GGG | + | chr7.3:48555261-48555280 | None:intergenic | 30.0% |
| !! | CCTTTTGGGAATATTTCAAA+TGG | + | chr7.3:48556172-48556191 | None:intergenic | 30.0% |
| !! | GCTTTTGATGATTCAAAAGT+TGG | - | chr7.3:48555129-48555148 | MS.gene49005:CDS | 30.0% |
| !! | TATGTCTTTGAGGTCTATAA+TGG | + | chr7.3:48555262-48555281 | None:intergenic | 30.0% |
| !! | TTTGCTATTTGCCTAATACA+AGG | + | chr7.3:48555772-48555791 | None:intergenic | 30.0% |
| ACCTTTGATGTACCTTCAAT+TGG | + | chr7.3:48557041-48557060 | None:intergenic | 35.0% | |
| ATCAATGTTCCTCCTATACA+TGG | - | chr7.3:48556515-48556534 | MS.gene49005:intron | 35.0% | |
| CAAGTCCATAAAGTTCTTGA+AGG | + | chr7.3:48556050-48556069 | None:intergenic | 35.0% | |
| CAATGTTCTGTGATAAGACT+CGG | + | chr7.3:48556974-48556993 | None:intergenic | 35.0% | |
| CACAACAATTCAACTCTTTG+AGG | + | chr7.3:48556346-48556365 | None:intergenic | 35.0% | |
| CATATGGATGGTAGTTCATT+TGG | + | chr7.3:48555573-48555592 | None:intergenic | 35.0% | |
| CCTGAACCTGAATTAACAAT+GGG | - | chr7.3:48556404-48556423 | MS.gene49005:intron | 35.0% | |
| GAAGCTACTATCAGTATGTT+TGG | + | chr7.3:48556435-48556454 | None:intergenic | 35.0% | |
| GATTGATGTGTATGTCTTTG+AGG | + | chr7.3:48555272-48555291 | None:intergenic | 35.0% | |
| GTAATGTCTTTGTAGATTGG+AGG | + | chr7.3:48557101-48557120 | None:intergenic | 35.0% | |
| GTGAAAAATACGTGGAATCT+TGG | + | chr7.3:48555184-48555203 | None:intergenic | 35.0% | |
| GTTAATTACCTGCATATGGA+TGG | + | chr7.3:48555585-48555604 | None:intergenic | 35.0% | |
| TATTATGCAAAAGGCCTAGA+TGG | - | chr7.3:48557143-48557162 | MS.gene49005:CDS | 35.0% | |
| TATTTGCCTAATACAAGGAG+TGG | + | chr7.3:48555767-48555786 | None:intergenic | 35.0% | |
| TCCTGAACCTGAATTAACAA+TGG | - | chr7.3:48556403-48556422 | MS.gene49005:intron | 35.0% | |
| TCGCGAAACATTCGTAATAA+TGG | - | chr7.3:48555813-48555832 | MS.gene49005:intron | 35.0% | |
| TGTGAAGGACTCTTTATTCA+AGG | - | chr7.3:48556362-48556381 | MS.gene49005:intron | 35.0% | |
| ! | AACCCAAATCCCTTATCTTT+TGG | + | chr7.3:48556214-48556233 | None:intergenic | 35.0% |
| ! | ACCAATTGAAGGTACATCAA+AGG | - | chr7.3:48557037-48557056 | MS.gene49005:CDS | 35.0% |
| ! | ATTCCACGTATTTTTCACAC+CGG | - | chr7.3:48555186-48555205 | MS.gene49005:CDS | 35.0% |
| ! | GAAGGTACATCAAAGGTTTA+TGG | - | chr7.3:48557044-48557063 | MS.gene49005:CDS | 35.0% |
| ! | TATAATGGGAACACTCAACT+TGG | + | chr7.3:48555247-48555266 | None:intergenic | 35.0% |
| ! | TATTTTTCACACCGGAAAGT+TGG | - | chr7.3:48555194-48555213 | MS.gene49005:CDS | 35.0% |
| ! | TGAGTTTTCGCTGTAGTTTT+AGG | - | chr7.3:48555641-48555660 | MS.gene49005:intron | 35.0% |
| ! | TGATGGGCAAGAACATAATT+AGG | + | chr7.3:48555613-48555632 | None:intergenic | 35.0% |
| !! | GGTAGTTCATTTGGTTTGAA+TGG | + | chr7.3:48555564-48555583 | None:intergenic | 35.0% |
| !! | GGTCTTGTTAACATTGTTGA+AGG | + | chr7.3:48556712-48556731 | None:intergenic | 35.0% |
| !! | TCATTTGGTTTGAATGGATG+AGG | + | chr7.3:48555558-48555577 | None:intergenic | 35.0% |
| !! | TCTTGAAGGTGTTACTTCAT+CGG | + | chr7.3:48556036-48556055 | None:intergenic | 35.0% |
| !!! | AGCCCAAATCCCTTATTTTT+TGG | + | chr7.3:48556274-48556293 | None:intergenic | 35.0% |
| !!! | GCCCAAATCCCTTATTTTTT+GGG | + | chr7.3:48556273-48556292 | None:intergenic | 35.0% |
| AAACGTAGGAGATCTTCTAC+AGG | - | chr7.3:48556550-48556569 | MS.gene49005:intron | 40.0% | |
| ATGAACTACCATCCATATGC+AGG | - | chr7.3:48555574-48555593 | MS.gene49005:intron | 40.0% | |
| CCAAGAAAGAGTTTCCATCT+AGG | + | chr7.3:48557160-48557179 | None:intergenic | 40.0% | |
| CCTAGATGGAAACTCTTTCT+TGG | - | chr7.3:48557157-48557176 | MS.gene49005:CDS | 40.0% | |
| CTTCTACAAGATCAACTTGG+TGG | - | chr7.3:48556464-48556483 | MS.gene49005:intron | 40.0% | |
| GAACATTGGCCCAAGAATTT+CGG | - | chr7.3:48556986-48557005 | MS.gene49005:CDS | 40.0% | |
| GCTAATTGGAGAGATACACT+TGG | - | chr7.3:48555519-48555538 | MS.gene49005:intron | 40.0% | |
| TATCTCTCCAATTAGCAGCT+TGG | + | chr7.3:48555515-48555534 | None:intergenic | 40.0% | |
| TCTGAAAGGAGCTCCTTAAT+AGG | + | chr7.3:48557071-48557090 | None:intergenic | 40.0% | |
| TGCAGCTTATCTCAAATGAC+AGG | - | chr7.3:48556931-48556950 | MS.gene49005:CDS | 40.0% | |
| TTCAGTGATCTCCAACTTTC+CGG | + | chr7.3:48555208-48555227 | None:intergenic | 40.0% | |
| TTTCCACCACTCCTTGTATT+AGG | - | chr7.3:48555758-48555777 | MS.gene49005:intron | 40.0% | |
| TTTCCGGTGTGAAAAATACG+TGG | + | chr7.3:48555192-48555211 | None:intergenic | 40.0% | |
| TTTGAATGGATGAGGAGCAA+CGG | + | chr7.3:48555550-48555569 | None:intergenic | 40.0% | |
| ! | CCCATTGTTAATTCAGGTTC+AGG | + | chr7.3:48556407-48556426 | None:intergenic | 40.0% |
| ! | CGAGTCTTATCACAGAACAT+TGG | - | chr7.3:48556972-48556991 | MS.gene49005:CDS | 40.0% |
| ! | GTTAATTCAGGTTCAGGACA+TGG | + | chr7.3:48556401-48556420 | None:intergenic | 40.0% |
| ! | TCCAATGGAACCTTGTTTAG+CGG | - | chr7.3:48555489-48555508 | MS.gene49005:intron | 40.0% |
| ! | TGGTCTTCAAGTTCTTCATG+AGG | - | chr7.3:48556484-48556503 | MS.gene49005:intron | 40.0% |
| ! | TTGGAGGGTTTTCTTCTGAA+AGG | + | chr7.3:48557085-48557104 | None:intergenic | 40.0% |
| !! | AAAAGTTGGTGTCAGAGGAT+TGG | - | chr7.3:48555143-48555162 | MS.gene49005:CDS | 40.0% |
| !! | AAGCTTGCTACCGAAATTCT+TGG | + | chr7.3:48556999-48557018 | None:intergenic | 40.0% |
| !! | AGCTTGCTACCGAAATTCTT+GGG | + | chr7.3:48556998-48557017 | None:intergenic | 40.0% |
| !! | GAATTATTGTCGGAGGCATT+AGG | - | chr7.3:48556305-48556324 | MS.gene49005:intron | 40.0% |
| !! | GATTCAAAAGTTGGTGTCAG+AGG | - | chr7.3:48555138-48555157 | MS.gene49005:CDS | 40.0% |
| ACAAGAGCTCCATGTATAGG+AGG | + | chr7.3:48556527-48556546 | None:intergenic | 45.0% | |
| ACCACAAGAGCTCCATGTAT+AGG | + | chr7.3:48556530-48556549 | None:intergenic | 45.0% | |
| ATCACCTCTATACGTAGAGC+TGG | + | chr7.3:48555294-48555313 | None:intergenic | 45.0% | |
| CAATCCAGCTCTACGTATAG+AGG | - | chr7.3:48555287-48555306 | MS.gene49005:intron | 45.0% | |
| CCTGAAAAAATCCCCACTCA+TGG | + | chr7.3:48555338-48555357 | None:intergenic | 45.0% | |
| GCAGTGCCCATTGTTAATTC+AGG | + | chr7.3:48556413-48556432 | None:intergenic | 45.0% | |
| TCAGTAAGTGCCACATGTGT+CGG | + | chr7.3:48555709-48555728 | None:intergenic | 45.0% | |
| TCCTATACATGGAGCTCTTG+TGG | - | chr7.3:48556526-48556545 | MS.gene49005:intron | 45.0% | |
| TTGCCTAATACAAGGAGTGG+TGG | + | chr7.3:48555764-48555783 | None:intergenic | 45.0% | |
| ! | AATTCAGGTTCAGGACATGG+TGG | + | chr7.3:48556398-48556417 | None:intergenic | 45.0% |
| ! | TCAGAGGATTGGTAGAGTCT+GGG | - | chr7.3:48555154-48555173 | MS.gene49005:CDS | 45.0% |
| ! | TGTGGCACTTACTGATTGCA+TGG | - | chr7.3:48555714-48555733 | MS.gene49005:intron | 45.0% |
| !!! | CCATGAGTGGGGATTTTTTC+AGG | - | chr7.3:48555335-48555354 | MS.gene49005:intron | 45.0% |
| AAATCCCCACTCATGGCATG+CGG | + | chr7.3:48555331-48555350 | None:intergenic | 50.0% | |
| AAGGGAATATGGCCGTCTTG+AGG | + | chr7.3:48556693-48556712 | None:intergenic | 50.0% | |
| ACATGTGTCGGGAAATGCTC+GGG | + | chr7.3:48555697-48555716 | None:intergenic | 50.0% | |
| CACATGTGTCGGGAAATGCT+CGG | + | chr7.3:48555698-48555717 | None:intergenic | 50.0% | |
| CAGTAAGTGCCACATGTGTC+GGG | + | chr7.3:48555708-48555727 | None:intergenic | 50.0% | |
| CATGGCATGCGGTTCGAATT+TGG | + | chr7.3:48555320-48555339 | None:intergenic | 50.0% | |
| GCCGCTAAACAAGGTTCCAT+TGG | + | chr7.3:48555493-48555512 | None:intergenic | 50.0% | |
| GGAGCTCTTGTGGTAAACGT+AGG | - | chr7.3:48556536-48556555 | MS.gene49005:intron | 50.0% | |
| TTAGCGGCCAAGCTGCTAAT+TGG | - | chr7.3:48555505-48555524 | MS.gene49005:intron | 50.0% | |
| ! | CAGAGGATTGGTAGAGTCTG+GGG | - | chr7.3:48555155-48555174 | MS.gene49005:CDS | 50.0% |
| ! | GTCAGAGGATTGGTAGAGTC+TGG | - | chr7.3:48555153-48555172 | MS.gene49005:CDS | 50.0% |
| AGCAGCTTGGCCGCTAAACA+AGG | + | chr7.3:48555502-48555521 | None:intergenic | 55.0% | |
| CGAGCATTTCCCGACACATG+TGG | - | chr7.3:48555696-48555715 | MS.gene49005:intron | 55.0% | |
| TCGAACCGCATGCCATGAGT+GGG | - | chr7.3:48555323-48555342 | MS.gene49005:intron | 55.0% | |
| TTCGAACCGCATGCCATGAG+TGG | - | chr7.3:48555322-48555341 | MS.gene49005:intron | 55.0% | |
| CGAACCGCATGCCATGAGTG+GGG | - | chr7.3:48555324-48555343 | MS.gene49005:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 48555057 | 48557196 | 48555057 | ID=MS.gene49005 |
| chr7.3 | mRNA | 48555057 | 48557196 | 48555057 | ID=MS.gene49005.t1;Parent=MS.gene49005 |
| chr7.3 | exon | 48556658 | 48557196 | 48556658 | ID=MS.gene49005.t1.exon1;Parent=MS.gene49005.t1 |
| chr7.3 | CDS | 48556658 | 48557196 | 48556658 | ID=cds.MS.gene49005.t1;Parent=MS.gene49005.t1 |
| chr7.3 | exon | 48555057 | 48555300 | 48555057 | ID=MS.gene49005.t1.exon2;Parent=MS.gene49005.t1 |
| chr7.3 | CDS | 48555057 | 48555300 | 48555057 | ID=cds.MS.gene49005.t1;Parent=MS.gene49005.t1 |
| Gene Sequence |
| Protein sequence |
