AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49485

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49485.t1 MTR_5g074970 97.378 267 7 0 1 267 60 326 0.0 535
MS.gene49485.t1 MTR_3g466200 74.532 267 67 1 1 267 55 320 6.57e-148 416
MS.gene49485.t1 MTR_3g094650 69.663 267 79 2 1 267 58 322 6.45e-133 379
MS.gene49485.t1 MTR_5g083860 68.914 267 81 2 1 267 61 325 1.52e-130 373
MS.gene49485.t1 MTR_3g094670 67.790 267 84 2 1 267 58 322 9.37e-123 353
MS.gene49485.t1 MTR_4g029200 62.921 267 95 2 1 267 76 338 9.18e-121 348
MS.gene49485.t1 MTR_4g029170 66.045 268 87 2 1 267 57 321 1.08e-119 345
MS.gene49485.t1 MTR_4g029190 62.825 269 94 3 1 267 76 340 1.96e-118 342
MS.gene49485.t1 MTR_3g094630 67.416 267 85 2 1 267 58 322 2.09e-118 342
MS.gene49485.t1 MTR_3g072190 64.419 267 91 3 1 267 56 318 5.69e-117 338
MS.gene49485.t1 MTR_7g072510 62.921 267 95 2 1 267 50 312 1.15e-116 337
MS.gene49485.t1 MTR_4g029180 63.806 268 93 2 1 267 57 321 2.35e-114 332
MS.gene49485.t1 MTR_2g084080 61.049 267 100 2 1 267 55 317 9.47e-114 330
MS.gene49485.t1 MTR_2g084110 61.049 267 100 2 1 267 55 317 6.00e-113 328
MS.gene49485.t1 MTR_7g072480 62.921 267 95 2 1 267 54 316 9.80e-113 327
MS.gene49485.t1 MTR_5g074860 61.993 271 93 6 1 266 59 324 3.39e-112 326
MS.gene49485.t1 MTR_4g083710 60.370 270 102 4 1 267 57 324 2.52e-111 324
MS.gene49485.t1 MTR_3g466180 62.921 267 95 2 1 267 61 323 2.01e-108 317
MS.gene49485.t1 MTR_2g084020 60.075 268 102 3 1 267 55 318 2.41e-108 316
MS.gene49485.t1 MTR_4g074995 59.480 269 93 4 1 267 54 308 5.88e-108 315
MS.gene49485.t1 MTR_2g084090 59.176 267 106 2 1 267 55 318 5.97e-108 315
MS.gene49485.t1 MTR_5g074760 60.662 272 97 7 1 267 55 321 3.74e-107 313
MS.gene49485.t1 MTR_2g084010 59.328 268 104 3 1 267 55 318 1.28e-106 311
MS.gene49485.t1 MTR_5g074740 60.662 272 97 7 1 267 55 321 1.80e-106 311
MS.gene49485.t1 MTR_7g026990 59.176 267 104 3 1 267 61 322 4.66e-106 310
MS.gene49485.t1 MTR_3g467600 59.191 272 102 6 1 267 57 324 9.16e-106 310
MS.gene49485.t1 MTR_3g072190 61.417 254 94 2 14 267 2 251 3.04e-105 306
MS.gene49485.t1 MTR_5g074710 59.191 272 101 7 1 267 55 321 1.26e-104 307
MS.gene49485.t1 MTR_1g115900 56.296 270 110 4 1 267 57 321 1.56e-102 301
MS.gene49485.t1 MTR_4g074990 56.134 269 99 4 1 267 54 305 7.41e-102 299
MS.gene49485.t1 MTR_2g084000 57.090 268 110 3 1 267 56 319 7.75e-102 300
MS.gene49485.t1 MTR_5g021060 53.091 275 117 4 1 267 60 330 1.87e-94 281
MS.gene49485.t1 MTR_8g076820 52.727 275 118 4 1 267 60 330 2.32e-92 276
MS.gene49485.t1 MTR_5g017850 51.460 274 122 3 1 267 57 326 4.20e-92 275
MS.gene49485.t1 MTR_5g017860 51.460 274 122 3 1 267 57 326 1.20e-91 274
MS.gene49485.t1 MTR_1g054205 51.264 277 121 5 1 267 54 326 1.53e-91 274
MS.gene49485.t1 MTR_2g040000 53.763 279 111 5 1 267 59 331 3.16e-91 273
MS.gene49485.t1 MTR_4g125940 52.518 278 115 5 1 267 3 274 5.74e-91 270
MS.gene49485.t1 MTR_4g122640 53.480 273 117 4 1 267 68 336 1.21e-90 271
MS.gene49485.t1 MTR_1g022970 52.899 276 117 4 1 267 76 347 3.51e-90 271
MS.gene49485.t1 MTR_4g125940 52.518 278 115 5 1 267 58 329 5.80e-90 270
MS.gene49485.t1 MTR_4g074980 52.788 269 96 6 1 267 55 294 1.39e-88 265
MS.gene49485.t1 MTR_2g029730 50.000 276 125 4 1 267 55 326 1.50e-87 264
MS.gene49485.t1 MTR_5g049280 49.819 277 125 6 2 267 64 337 2.20e-87 263
MS.gene49485.t1 MTR_2g028980 51.449 276 121 4 1 267 59 330 1.28e-86 262
MS.gene49485.t1 MTR_2g029830 50.725 276 123 4 1 267 58 329 1.57e-86 262
MS.gene49485.t1 MTR_5g014100 51.786 280 118 5 1 267 56 331 2.59e-86 260
MS.gene49485.t1 MTR_7g093370 49.281 278 125 6 1 267 99 371 5.15e-86 261
MS.gene49485.t1 MTR_2g029560 49.638 276 126 5 1 267 54 325 6.12e-86 260
MS.gene49485.t1 MTR_2g029750 52.174 276 119 4 1 267 59 330 9.47e-86 260
MS.gene49485.t1 MTR_2g029800 50.725 276 123 4 1 267 59 330 2.66e-85 259
MS.gene49485.t1 MTR_2g029815 49.819 277 124 5 1 267 59 330 4.74e-84 255
MS.gene49485.t1 MTR_2g029740 51.449 276 121 5 1 267 59 330 1.27e-83 254
MS.gene49485.t1 MTR_5g074860 51.661 271 82 7 1 266 59 285 3.82e-82 248
MS.gene49485.t1 MTR_2g029820 49.458 277 125 5 1 267 59 330 2.36e-81 249
MS.gene49485.t1 MTR_4g074980 59.204 201 78 3 1 199 55 253 7.86e-81 244
MS.gene49485.t1 MTR_2g029860 47.826 276 131 4 1 267 59 330 8.01e-81 247
MS.gene49485.t1 MTR_4g031140 47.426 272 129 5 3 267 60 324 2.13e-80 246
MS.gene49485.t1 MTR_4g030890 47.059 272 130 5 3 267 132 396 6.59e-79 244
MS.gene49485.t1 MTR_2g029830 49.231 260 119 4 17 267 6 261 7.86e-77 235
MS.gene49485.t1 MTR_2g029910 46.350 274 135 4 3 267 62 332 1.13e-76 236
MS.gene49485.t1 MTR_2g029850 47.101 276 129 5 3 267 61 330 1.46e-76 236
MS.gene49485.t1 MTR_0155s0040 45.522 268 136 5 1 267 57 315 2.78e-76 234
MS.gene49485.t1 MTR_1g077000 44.776 268 138 5 1 267 69 327 1.27e-74 231
MS.gene49485.t1 MTR_1g038680 45.126 277 139 5 1 267 59 332 5.56e-73 226
MS.gene49485.t1 MTR_1g086320 44.043 277 142 5 1 267 60 333 5.88e-72 224
MS.gene49485.t1 MTR_2g088770 45.652 276 135 7 1 267 56 325 6.07e-72 224
MS.gene49485.t1 MTR_2g008710 45.255 274 130 6 5 267 61 325 1.30e-71 223
MS.gene49485.t1 MTR_4g046713 42.909 275 144 5 1 267 57 326 5.13e-71 221
MS.gene49485.t1 MTR_3g092990 43.431 274 145 3 1 267 56 326 2.25e-70 219
MS.gene49485.t1 MTR_7g029030 45.620 274 132 7 2 267 56 320 3.94e-68 214
MS.gene49485.t1 MTR_1g086490 43.369 279 140 5 5 267 64 340 5.85e-68 214
MS.gene49485.t1 MTR_6g043280 45.149 268 132 6 5 267 75 332 6.66e-68 213
MS.gene49485.t1 MTR_1g101830 42.804 271 138 7 5 267 61 322 9.32e-67 210
MS.gene49485.t1 MTR_2g437770 41.455 275 140 6 1 267 80 341 2.47e-66 210
MS.gene49485.t1 MTR_5g074700 52.423 227 88 8 44 267 5 214 7.19e-66 204
MS.gene49485.t1 MTR_1g025980 44.195 267 133 6 4 263 57 314 9.07e-66 207
MS.gene49485.t1 MTR_5g022870 42.647 272 139 5 3 267 55 316 1.25e-65 207
MS.gene49485.t1 MTR_4g133800 41.455 275 141 6 1 267 71 333 2.24e-65 207
MS.gene49485.t1 MTR_4g114210 42.545 275 137 6 5 267 55 320 2.28e-65 206
MS.gene49485.t1 MTR_3g072210 57.895 190 74 5 80 267 53 238 5.28e-65 203
MS.gene49485.t1 MTR_6g027440 41.045 268 153 3 1 267 51 314 2.69e-64 204
MS.gene49485.t1 MTR_7g086820 40.370 270 147 4 3 267 52 312 4.74e-63 201
MS.gene49485.t1 MTR_8g075100 40.433 277 138 6 3 267 58 319 7.26e-63 200
MS.gene49485.t1 MTR_4g087965 45.055 273 136 6 2 263 73 342 5.42e-62 199
MS.gene49485.t1 MTR_3g092990 43.023 258 137 3 17 267 61 315 3.99e-61 196
MS.gene49485.t1 MTR_7g086870 39.179 268 154 4 1 267 52 311 6.25e-61 195
MS.gene49485.t1 MTR_6g043460 41.353 266 146 5 5 267 70 328 6.60e-60 193
MS.gene49485.t1 MTR_7g107520 40.511 274 148 6 1 267 55 320 7.78e-60 192
MS.gene49485.t1 MTR_2g008730 44.309 246 120 5 33 267 62 301 2.46e-59 191
MS.gene49485.t1 MTR_0286s0010 39.785 279 146 8 2 267 65 334 3.94e-59 191
MS.gene49485.t1 MTR_6g008075 39.785 279 146 8 2 267 65 334 3.94e-59 191
MS.gene49485.t1 MTR_2g077990 39.535 301 144 9 1 265 106 404 8.70e-59 192
MS.gene49485.t1 MTR_1g090760 39.706 272 152 5 5 267 62 330 1.72e-58 189
MS.gene49485.t1 MTR_5g033470 38.686 274 158 5 3 267 105 377 3.09e-58 190
MS.gene49485.t1 MTR_2g078610 38.870 301 146 9 1 265 106 404 4.76e-58 190
MS.gene49485.t1 MTR_2g067440 37.333 300 151 7 1 266 90 386 1.17e-57 189
MS.gene49485.t1 MTR_8g062780 40.364 275 151 5 2 267 54 324 1.28e-57 187
MS.gene49485.t1 MTR_5g016010 40.370 270 143 7 6 263 62 325 1.86e-57 186
MS.gene49485.t1 MTR_7g072490 44.672 244 77 2 17 260 2 187 3.57e-57 182
MS.gene49485.t1 MTR_6g043240 39.850 266 147 5 5 267 76 331 7.75e-57 186
MS.gene49485.t1 MTR_4g132110 38.722 266 159 3 4 267 65 328 3.47e-56 183
MS.gene49485.t1 MTR_4g127670 42.545 275 135 10 6 267 59 323 6.78e-56 182
MS.gene49485.t1 MTR_2g099175 37.868 272 154 5 5 267 70 335 3.91e-55 181
MS.gene49485.t1 MTR_1g066640 39.098 266 158 3 4 267 60 323 4.60e-55 180
MS.gene49485.t1 MTR_1g066680 37.970 266 161 3 4 267 59 322 5.32e-55 180
MS.gene49485.t1 MTR_2g008160 40.072 277 141 7 5 267 58 323 8.49e-55 179
MS.gene49485.t1 MTR_4g095450 42.481 266 138 9 6 263 62 320 1.52e-54 179
MS.gene49485.t1 MTR_4g132490 36.296 270 162 4 4 267 62 327 3.39e-54 178
MS.gene49485.t1 MTR_1g066380 37.594 266 162 3 4 267 60 323 5.44e-54 177
MS.gene49485.t1 MTR_4g132110 38.007 271 159 4 4 267 65 333 9.43e-54 177
MS.gene49485.t1 MTR_1g009750 40.441 272 147 7 6 267 62 328 1.07e-53 177
MS.gene49485.t1 MTR_2g078280 39.100 289 138 9 1 253 106 392 1.37e-53 178
MS.gene49485.t1 MTR_1g066710 37.594 266 162 3 4 267 60 323 2.42e-53 176
MS.gene49485.t1 MTR_3g105790 37.818 275 152 5 3 267 57 322 1.03e-52 174
MS.gene49485.t1 MTR_2g067450 36.996 273 154 7 5 266 44 309 9.80e-50 166
MS.gene49485.t1 MTR_1g066380 36.471 255 158 3 15 267 3 255 1.59e-49 164
MS.gene49485.t1 MTR_0147s0010 34.495 287 149 6 4 266 110 381 7.92e-49 166
MS.gene49485.t1 MTR_2g008160 37.638 271 121 7 5 267 58 288 9.20e-45 152
MS.gene49485.t1 MTR_1g009750 37.037 270 142 8 6 267 62 311 6.34e-43 148
MS.gene49485.t1 MTR_3g105790 37.083 240 136 4 38 267 12 246 6.06e-42 144
MS.gene49485.t1 MTR_2g008160 48.175 137 66 3 5 141 58 189 1.44e-36 129
MS.gene49485.t1 MTR_2g029880 38.660 194 96 4 83 267 9 188 2.95e-36 128
MS.gene49485.t1 MTR_3g072260 73.750 80 21 0 1 80 56 135 6.16e-35 122
MS.gene49485.t1 MTR_2g077980 31.273 275 144 9 33 265 11 282 5.27e-28 108
MS.gene49485.t1 MTR_5g074770 52.128 94 42 2 175 266 16 108 6.98e-26 98.6
MS.gene49485.t1 MTR_5g058120 35.256 156 94 2 108 263 7 155 1.73e-25 101
MS.gene49485.t1 MTR_2g078560 31.390 223 117 7 76 263 95 316 2.70e-23 97.1
MS.gene49485.t1 MTR_6g048160 65.714 70 20 2 10 79 22 87 9.47e-23 89.7
MS.gene49485.t1 MTR_4g114220 60.811 74 19 2 5 78 37 100 1.95e-22 90.5
MS.gene49485.t1 MTR_3g462850 38.462 143 75 5 136 267 9 149 6.12e-22 89.4
MS.gene49485.t1 MTR_4g031040 35.294 170 69 5 32 201 3 131 7.15e-21 86.3
MS.gene49485.t1 MTR_7g086790 41.322 121 66 3 18 138 17 132 1.27e-20 87.0
MS.gene49485.t1 MTR_1g098320 36.937 111 70 0 157 267 14 124 2.30e-19 82.4
MS.gene49485.t1 MTR_1g089005 46.067 89 41 2 1 83 45 132 9.21e-15 70.5
MS.gene49485.t1 MTR_0147s0040 35.616 73 47 0 193 265 9 81 1.58e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49485.t1 AT5G58390 70.037 267 79 1 1 267 51 316 1.09e-133 380
MS.gene49485.t1 AT5G05340 68.165 267 83 2 1 267 60 324 6.66e-130 371
MS.gene49485.t1 AT5G58400 67.416 267 86 1 1 267 60 325 6.74e-130 371
MS.gene49485.t1 AT1G14550 57.993 269 108 3 1 267 56 321 6.40e-107 313
MS.gene49485.t1 AT1G14540 55.019 269 115 4 1 267 51 315 3.48e-97 288
MS.gene49485.t1 AT3G50990 52.727 275 118 5 1 267 71 341 7.58e-95 283
MS.gene49485.t1 AT5G06720 52.174 276 119 4 1 267 62 333 2.48e-94 281
MS.gene49485.t1 AT5G66390 51.636 275 121 4 1 267 63 333 4.31e-94 280
MS.gene49485.t1 AT4G36430 51.636 275 121 4 1 267 60 330 8.15e-94 280
MS.gene49485.t1 AT2G18150 51.273 275 122 4 1 267 66 336 6.30e-92 275
MS.gene49485.t1 AT5G06730 50.000 276 125 4 1 267 63 334 9.15e-92 275
MS.gene49485.t1 AT4G16270 54.152 277 109 7 1 267 80 348 1.91e-90 271
MS.gene49485.t1 AT1G44970 51.449 276 121 4 1 267 75 346 3.61e-89 268
MS.gene49485.t1 AT2G18140 50.545 275 124 4 1 267 65 335 1.57e-88 266
MS.gene49485.t1 AT1G49570 51.471 272 120 3 1 263 78 346 1.09e-87 265
MS.gene49485.t1 AT2G35380 50.181 277 127 3 1 267 60 335 5.24e-85 257
MS.gene49485.t1 AT1G68850 48.175 274 129 5 5 267 64 335 1.50e-84 256
MS.gene49485.t1 AT5G19890 50.000 278 118 6 1 267 60 327 1.10e-83 254
MS.gene49485.t1 AT5G19880 49.462 279 125 5 1 267 55 329 6.62e-83 252
MS.gene49485.t1 AT4G08770 48.754 281 123 6 1 267 54 327 2.92e-82 251
MS.gene49485.t1 AT2G38390 48.921 278 126 6 1 267 61 333 4.88e-82 250
MS.gene49485.t1 AT3G49110 48.929 280 124 6 1 267 63 336 6.11e-81 248
MS.gene49485.t1 AT2G38380 48.921 278 126 6 1 267 61 333 1.95e-80 246
MS.gene49485.t1 AT3G32980 47.143 280 129 6 1 267 61 334 7.13e-80 245
MS.gene49485.t1 AT4G08780 46.786 280 130 6 1 267 54 327 5.94e-79 242
MS.gene49485.t1 AT3G49120 47.143 280 129 6 1 267 62 335 5.43e-78 240
MS.gene49485.t1 AT2G22420 45.956 272 133 4 3 267 55 319 1.69e-76 235
MS.gene49485.t1 AT3G01190 44.565 276 134 8 1 267 56 321 3.18e-74 229
MS.gene49485.t1 AT1G71695 44.649 271 141 4 1 267 74 339 2.44e-73 228
MS.gene49485.t1 AT4G33420 45.149 268 137 5 1 267 67 325 1.27e-72 225
MS.gene49485.t1 AT4G33420 45.149 268 137 5 1 267 114 372 7.92e-72 225
MS.gene49485.t1 AT2G35380 48.571 245 115 3 33 267 4 247 1.21e-70 218
MS.gene49485.t1 AT5G51890 43.333 270 139 6 5 267 60 322 4.12e-70 219
MS.gene49485.t1 AT1G05260 44.404 277 137 8 1 267 56 325 9.47e-70 218
MS.gene49485.t1 AT4G11290 42.599 277 144 7 1 267 55 326 2.23e-69 217
MS.gene49485.t1 AT5G15180 42.391 276 142 8 1 267 62 329 2.63e-68 214
MS.gene49485.t1 AT5G64120 42.593 270 138 6 5 267 69 328 4.29e-68 214
MS.gene49485.t1 AT1G05240 41.155 277 146 6 1 267 56 325 2.13e-66 209
MS.gene49485.t1 AT1G05250 41.155 277 146 6 1 267 56 325 2.13e-66 209
MS.gene49485.t1 AT1G30870 44.043 277 133 6 1 267 81 345 3.60e-66 209
MS.gene49485.t1 AT2G41480 42.182 275 138 6 5 267 63 328 4.68e-66 209
MS.gene49485.t1 AT5G40150 41.606 274 144 6 2 267 63 328 9.76e-66 208
MS.gene49485.t1 AT3G03670 41.392 273 146 5 3 267 55 321 1.06e-65 207
MS.gene49485.t1 AT3G28200 40.659 273 147 6 2 267 52 316 9.57e-65 205
MS.gene49485.t1 AT5G17820 41.544 272 138 6 3 267 56 313 2.40e-64 204
MS.gene49485.t1 AT5G42180 43.333 270 137 7 3 265 55 315 1.29e-63 202
MS.gene49485.t1 AT5G17820 41.544 272 138 6 3 267 109 366 2.25e-63 203
MS.gene49485.t1 AT4G33870 36.545 301 150 5 5 266 102 400 3.28e-63 204
MS.gene49485.t1 AT3G21770 41.455 275 146 7 1 266 59 327 1.88e-62 199
MS.gene49485.t1 AT5G14130 41.481 270 144 5 6 267 67 330 3.82e-62 199
MS.gene49485.t1 AT5G14130 41.481 270 144 5 6 267 108 371 9.84e-62 199
MS.gene49485.t1 AT4G26010 40.377 265 147 5 1 264 52 306 2.63e-60 193
MS.gene49485.t1 AT5G47000 43.071 267 143 5 6 267 68 330 3.78e-60 194
MS.gene49485.t1 AT4G26010 40.684 263 145 5 3 264 82 334 4.85e-60 194
MS.gene49485.t1 AT5G39580 42.804 271 137 7 5 267 59 319 9.02e-60 192
MS.gene49485.t1 AT4G17690 42.481 266 145 5 6 267 61 322 1.09e-59 192
MS.gene49485.t1 AT2G24800 40.074 272 151 4 3 267 63 329 1.53e-58 189
MS.gene49485.t1 AT4G37530 43.590 273 130 10 6 263 62 325 9.93e-58 187
MS.gene49485.t1 AT5G64100 39.560 273 143 6 5 267 71 331 1.54e-57 187
MS.gene49485.t1 AT1G24110 40.000 270 150 5 6 267 57 322 3.59e-57 186
MS.gene49485.t1 AT5G67400 41.481 270 140 7 6 263 62 325 3.77e-57 186
MS.gene49485.t1 AT5G64110 41.392 273 140 6 5 267 68 330 5.64e-57 185
MS.gene49485.t1 AT4G31760 38.007 271 157 4 3 267 61 326 6.92e-57 185
MS.gene49485.t1 AT1G34510 39.552 268 147 6 3 267 54 309 8.27e-57 184
MS.gene49485.t1 AT4G30170 41.606 274 138 8 6 267 62 325 9.20e-56 182
MS.gene49485.t1 AT1G77100 40.370 270 146 9 5 267 58 319 2.76e-55 181
MS.gene49485.t1 AT2G18980 40.511 274 141 8 6 267 60 323 1.18e-54 179
MS.gene49485.t1 AT4G37520 42.279 272 139 9 4 263 60 325 1.41e-54 179
MS.gene49485.t1 AT4G21960 38.722 266 159 3 4 267 64 327 1.64e-54 179
MS.gene49485.t1 AT2G34060 40.959 271 144 7 6 264 77 343 1.67e-54 179
MS.gene49485.t1 AT5G24070 38.235 272 152 5 5 267 71 335 3.49e-54 178
MS.gene49485.t1 AT3G49960 40.741 270 142 7 6 263 62 325 4.84e-54 178
MS.gene49485.t1 AT4G25980 37.681 276 150 7 5 267 60 326 5.42e-54 177
MS.gene49485.t1 AT4G37520 40.959 271 141 8 4 263 60 322 4.13e-53 175
MS.gene49485.t1 AT2G37130 37.500 272 155 7 4 267 32 296 2.19e-51 170
MS.gene49485.t1 AT2G39040 40.146 274 150 7 5 267 80 350 3.12e-51 171
MS.gene49485.t1 AT2G37130 37.500 272 155 7 4 267 63 327 5.57e-51 170
MS.gene49485.t1 AT2G43480 37.132 272 155 5 5 267 71 335 7.27e-51 170
MS.gene49485.t1 AT4G37530 45.575 226 99 10 6 216 62 278 4.55e-48 161
MS.gene49485.t1 AT5G22410 38.043 276 148 9 1 264 58 322 1.11e-46 159
MS.gene49485.t1 AT3G17070 33.091 275 169 5 3 267 70 339 2.26e-42 148
MS.gene49485.t1 AT3G17070 31.698 265 165 6 13 267 18 276 6.22e-36 129
MS.gene49485.t1 AT5G39580 45.238 168 82 4 5 172 59 216 6.17e-35 125
MS.gene49485.t1 AT2G24800 42.012 169 88 4 3 170 63 222 2.69e-34 124
MS.gene49485.t1 AT4G25980 44.444 135 70 3 5 139 105 234 5.94e-33 122
MS.gene49485.t1 AT4G32320 29.699 266 112 7 2 249 114 322 2.83e-19 86.3
MS.gene49485.t1 AT3G42570 30.508 118 80 1 24 139 32 149 4.73e-13 65.5

Find 62 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTCCACCTTAGACTTTA+TGG 0.119850 5.1:-57760624 None:intergenic
CTACCCAGGTTTCCTTTAAT+TGG 0.214761 5.1:-57762911 None:intergenic
CAAGAATCTCATTAACAAAA+AGG 0.243097 5.1:+57762711 MS.gene49485:CDS
TGCAGCTTGGAGGGCCATTT+TGG 0.267352 5.1:+57761693 MS.gene49485:intron
CCAAGTTTAACCTTCCAAAA+TGG 0.296962 5.1:-57761707 None:intergenic
TGTAGTATAAGTTATCAAAA+TGG 0.316765 5.1:-57762690 None:intergenic
AAGGACATGGTGGCCTTATC+TGG 0.324620 5.1:+57761845 MS.gene49485:CDS
TTGCTTCCTAATCTCACCTT+TGG 0.333452 5.1:-57762878 None:intergenic
AATGCAGGAGAGCCAATTAA+AGG 0.356166 5.1:+57762899 MS.gene49485:CDS
GGAAATAACAATCCTCTTAC+CGG 0.368033 5.1:+57762853 MS.gene49485:CDS
CCCTTAGCAACCTTATCAAT+AGG 0.384569 5.1:+57761798 MS.gene49485:CDS
AGTCTTCTCTCCTTTATTAG+AGG 0.384702 5.1:-57760555 None:intergenic
AAGGTTGCTAAGGGTAGAAA+AGG 0.387632 5.1:-57761789 None:intergenic
TGCTACTGCAATGATTAAGA+TGG 0.388563 5.1:+57762831 MS.gene49485:CDS
CATTGATGCCATAAAGTCTA+AGG 0.390648 5.1:+57760616 MS.gene49485:CDS
TGGAGGATCTACTGATTCAT+TGG 0.391305 5.1:+57762765 MS.gene49485:CDS
GAGCTTTAAACCTATTGATA+AGG 0.399870 5.1:-57761808 None:intergenic
GATGACACACCCTCTAATAA+AGG 0.415165 5.1:+57760545 MS.gene49485:CDS
ACCTATTGATAAGGTTGCTA+AGG 0.417064 5.1:-57761799 None:intergenic
TCACCTTTGGATCCGGTAAG+AGG 0.424240 5.1:-57762865 None:intergenic
ACCTCTCAAAGAATCTTTGT+TGG 0.427591 5.1:-57760585 None:intergenic
CCTAATCTCACCTTTGGATC+CGG 0.432355 5.1:-57762872 None:intergenic
CCTCTCAAAGAATCTTTGTT+GGG 0.433102 5.1:-57760584 None:intergenic
TTCTTAGGAGCTCACACAAT+TGG 0.437641 5.1:+57762517 MS.gene49485:intron
GGAAGGTTAAACTTGGAAGA+AGG 0.441433 5.1:+57761714 MS.gene49485:CDS
GTCTTCTCTCCTTTATTAGA+GGG 0.447683 5.1:-57760554 None:intergenic
GTAAATACGACCTCTATAAA+CGG 0.451345 5.1:-57762554 None:intergenic
CCGGATCCAAAGGTGAGATT+AGG 0.455777 5.1:+57762872 MS.gene49485:CDS
GAAGGTTAAACTTGGAAGAA+GGG 0.455829 5.1:+57761715 MS.gene49485:CDS
TATAAGTTATCAAAATGGTT+TGG 0.466239 5.1:-57762685 None:intergenic
ATCAATAGGTTTAAAGCTCA+AGG 0.476560 5.1:+57761812 MS.gene49485:CDS
ACAATTCCTCTGCCTTGACT+TGG 0.477817 5.1:-57762605 None:intergenic
ACTGTTTGCATCATTGAGGC+TGG 0.487052 5.1:-57761750 None:intergenic
GCTACTGCAATGATTAAGAT+GGG 0.493974 5.1:+57762832 MS.gene49485:CDS
CCCAACAAAGATTCTTTGAG+AGG 0.507682 5.1:+57760584 MS.gene49485:CDS
GTGAGATTAGGAAGCAATGC+AGG 0.517002 5.1:+57762884 MS.gene49485:CDS
TCAGCACATGAGACCACACC+GGG 0.520500 5.1:-57760653 None:intergenic
CACCACTGTTTGCATCATTG+AGG 0.529112 5.1:-57761754 None:intergenic
AGCTCAAGGACTCTCTACTA+AGG 0.542515 5.1:+57761826 MS.gene49485:CDS
CCTATTGATAAGGTTGCTAA+GGG 0.554792 5.1:-57761798 None:intergenic
AACAGAATCACGAGCAGCAA+TGG 0.556484 5.1:-57760684 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.559330 5.1:-57762738 None:intergenic
ATAGTTTATTTGCCAAGTCA+AGG 0.563167 5.1:+57762593 MS.gene49485:CDS
AGGAATTGTCCAAGGAAAAG+TGG 0.565194 5.1:+57762619 MS.gene49485:CDS
AGGTTGCTAAGGGTAGAAAA+GGG 0.568432 5.1:-57761788 None:intergenic
GCAAGGTGTACCGTTTATAG+AGG 0.575377 5.1:+57762544 MS.gene49485:CDS
CTAAGGGTAGAAAAGGGAGG+TGG 0.578099 5.1:-57761782 None:intergenic
AATCCTCTTACCGGATCCAA+AGG 0.590917 5.1:+57762862 MS.gene49485:CDS
TATTTGCCAAGTCAAGGCAG+AGG 0.591700 5.1:+57762599 MS.gene49485:CDS
CAAGGCAGAGGAATTGTCCA+AGG 0.617740 5.1:+57762611 MS.gene49485:CDS
TTGCTAAGGGTAGAAAAGGG+AGG 0.621073 5.1:-57761785 None:intergenic
TGATGCCATAAAGTCTAAGG+TGG 0.622773 5.1:+57760619 MS.gene49485:CDS
GTTAGAGAACCTCGCATGGG+AGG 0.625514 5.1:+57758861 None:intergenic
CTCACACAATTGGAAAAGCA+AGG 0.632448 5.1:+57762527 MS.gene49485:CDS
AAGGTGGAGTCAGTATGCCC+CGG 0.647987 5.1:+57760635 MS.gene49485:CDS
GGAGTCAGTATGCCCCGGTG+TGG 0.661070 5.1:+57760640 MS.gene49485:CDS
ATCAGCACATGAGACCACAC+CGG 0.662563 5.1:-57760654 None:intergenic
AGGACTCTCTACTAAGGACA+TGG 0.666154 5.1:+57761832 MS.gene49485:CDS
AGTCATGAAAATGAAGACGA+AGG 0.684805 5.1:-57758890 None:intergenic
AGCCTCAATGATGCAAACAG+TGG 0.715380 5.1:+57761752 MS.gene49485:CDS
ACTCTCTACTAAGGACATGG+TGG 0.722310 5.1:+57761835 MS.gene49485:CDS
CAGCACATGAGACCACACCG+GGG 0.839989 5.1:-57760652 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATACATTTAATTAT+TGG + chr5.1:57762098-57762117 MS.gene49485:intron 10.0%
!! AATTTATTAGATAAAGATTA+AGG - chr5.1:57760002-57760021 None:intergenic 10.0%
!! ATTTATTAGATAAAGATTAA+GGG - chr5.1:57760001-57760020 None:intergenic 10.0%
!! TAATAATTGTATCATAATAA+TGG - chr5.1:57761922-57761941 None:intergenic 10.0%
!! TAATCTTTATCTAATAAATT+TGG + chr5.1:57760002-57760021 MS.gene49485:intron 10.0%
!!! AATAATTAAATGTATTTTCT+TGG - chr5.1:57762099-57762118 None:intergenic 10.0%
!!! AGATTGAATATATTATTTTT+TGG + chr5.1:57759492-57759511 MS.gene49485:intron 10.0%
!! AAAAATTACTAAATTTGTGT+CGG + chr5.1:57759825-57759844 MS.gene49485:intron 15.0%
!! AATTTAGTACATATTCAAAT+AGG - chr5.1:57759876-57759895 None:intergenic 15.0%
!! TTGGTTACTAAATAATAATA+TGG - chr5.1:57759420-57759439 None:intergenic 15.0%
!! TTTATTAGATAAAGATTAAG+GGG - chr5.1:57760000-57760019 None:intergenic 15.0%
!!! ACACAAATTTAGTAATTTTT+TGG - chr5.1:57759825-57759844 None:intergenic 15.0%
!!! TTTATTGAAGAGATTTTTAA+TGG + chr5.1:57761143-57761162 MS.gene49485:intron 15.0%
!! AAGAATCTCATTAACAAAAA+GGG + chr5.1:57762712-57762731 MS.gene49485:CDS 20.0%
!! AATATAATGTTTACAAGTCT+TGG + chr5.1:57760956-57760975 MS.gene49485:intron 20.0%
!! AATATGTACTAAATTATGCA+TGG + chr5.1:57759881-57759900 MS.gene49485:intron 20.0%
!! AATATTGAGTGAATTGAATA+GGG + chr5.1:57759549-57759568 MS.gene49485:intron 20.0%
!! ATGTTTAAATTAGATACCAT+AGG - chr5.1:57761884-57761903 None:intergenic 20.0%
!! TAACGAGAAAAATTTAGATT+AGG + chr5.1:57759275-57759294 MS.gene49485:intron 20.0%
!! TAATATTGAGTGAATTGAAT+AGG + chr5.1:57759548-57759567 MS.gene49485:intron 20.0%
!! TATAAGTTATCAAAATGGTT+TGG - chr5.1:57762688-57762707 None:intergenic 20.0%
!! TGTAGTATAAGTTATCAAAA+TGG - chr5.1:57762693-57762712 None:intergenic 20.0%
!! TGTTGAAAATGAAATCTAAA+CGG - chr5.1:57762167-57762186 None:intergenic 20.0%
!! TTATTAGAAGAAAAGAAATG+AGG - chr5.1:57761613-57761632 None:intergenic 20.0%
!! TTGTTGTCAAACTAAAAAAA+TGG + chr5.1:57761556-57761575 MS.gene49485:intron 20.0%
!!! AAATCACTTTTTTCTAAACA+GGG + chr5.1:57760500-57760519 MS.gene49485:intron 20.0%
!!! ACTTTTAAATTCTTGAGATA+GGG + chr5.1:57759910-57759929 MS.gene49485:intron 20.0%
!!! AGAAATTTCTTTTAGAAACA+TGG + chr5.1:57760034-57760053 MS.gene49485:intron 20.0%
!!! ATTAAATGTATTTTCTTGGT+TGG - chr5.1:57762095-57762114 None:intergenic 20.0%
!!! GAATTGACATCTAATTATTT+TGG + chr5.1:57760854-57760873 MS.gene49485:intron 20.0%
!!! GTTACTATTCATTTTAACTT+TGG - chr5.1:57762143-57762162 None:intergenic 20.0%
!!! GTTCATTATTAAACTTTTTC+TGG - chr5.1:57760780-57760799 None:intergenic 20.0%
!!! TAAATCACTTTTTTCTAAAC+AGG + chr5.1:57760499-57760518 MS.gene49485:intron 20.0%
!!! TACTTTTAAATTCTTGAGAT+AGG + chr5.1:57759909-57759928 MS.gene49485:intron 20.0%
!!! TATTTTGGTGTTTGTAAAAT+GGG + chr5.1:57760869-57760888 MS.gene49485:intron 20.0%
!!! TTATTTTGGTGTTTGTAAAA+TGG + chr5.1:57760868-57760887 MS.gene49485:intron 20.0%
! AGTTATGTTTAGCAAAATCA+AGG - chr5.1:57761462-57761481 None:intergenic 25.0%
! ATAATTTCGAAGAATCTGTT+TGG + chr5.1:57761355-57761374 MS.gene49485:intron 25.0%
! ATTGTCTGATATGCTAAATA+TGG - chr5.1:57760359-57760378 None:intergenic 25.0%
! CAAGAATCTCATTAACAAAA+AGG + chr5.1:57762711-57762730 MS.gene49485:CDS 25.0%
! TACTAGAACAAAACGAAAAT+TGG - chr5.1:57761263-57761282 None:intergenic 25.0%
! TTAGTAGTTGATCATAGTAA+TGG - chr5.1:57759089-57759108 None:intergenic 25.0%
!! AATATGTGCATATAACTTGT+TGG - chr5.1:57761115-57761134 None:intergenic 25.0%
!! ACTTCATAAACATAGGATTT+TGG + chr5.1:57760461-57760480 MS.gene49485:intron 25.0%
!! AGTGTTATGTAAGTTGAATT+TGG - chr5.1:57762296-57762315 None:intergenic 25.0%
!! AGTTTTTGCTGATAATTTTC+TGG - chr5.1:57761003-57761022 None:intergenic 25.0%
!! ATGTTTAAAGTAAAGAACGT+CGG - chr5.1:57760258-57760277 None:intergenic 25.0%
!! ATTTCTTCCTCGATAAATTT+TGG + chr5.1:57759333-57759352 MS.gene49485:intron 25.0%
!! CCTATGTTTATGAAGTTTTA+GGG - chr5.1:57760457-57760476 None:intergenic 25.0%
!! TCCTATGTTTATGAAGTTTT+AGG - chr5.1:57760458-57760477 None:intergenic 25.0%
!! TTCTATTATATTTTGCAGCT+TGG + chr5.1:57761680-57761699 MS.gene49485:intron 25.0%
!!! AACAACAGTACTTTTTTTAG+AGG + chr5.1:57760078-57760097 MS.gene49485:intron 25.0%
!!! ACAACAGTACTTTTTTTAGA+GGG + chr5.1:57760079-57760098 MS.gene49485:intron 25.0%
AAAAAGACATGTACCAGATA+AGG - chr5.1:57761861-57761880 None:intergenic 30.0%
AATTACGCCAAAATTTATCG+AGG - chr5.1:57759343-57759362 None:intergenic 30.0%
ACGACATCAAAAAATTACAG+GGG - chr5.1:57759953-57759972 None:intergenic 30.0%
ACGCATGTCTAAATAATATG+AGG - chr5.1:57760284-57760303 None:intergenic 30.0%
AGTAACCAATTGTTCATATG+AGG + chr5.1:57759431-57759450 MS.gene49485:intron 30.0%
ATAGTTTATTTGCCAAGTCA+AGG + chr5.1:57762593-57762612 MS.gene49485:CDS 30.0%
ATTCACTCAATATTACTCAC+TGG - chr5.1:57759543-57759562 None:intergenic 30.0%
CACGACATCAAAAAATTACA+GGG - chr5.1:57759954-57759973 None:intergenic 30.0%
CATCATCATTAAATTCGTGA+CGG - chr5.1:57759163-57759182 None:intergenic 30.0%
CCCTAAAACTTCATAAACAT+AGG + chr5.1:57760454-57760473 MS.gene49485:intron 30.0%
GAAATCCTCATATGAACAAT+TGG - chr5.1:57759439-57759458 None:intergenic 30.0%
GAGTGAGAAGATATAATTCT+TGG + chr5.1:57761412-57761431 MS.gene49485:intron 30.0%
GTAAATACGACCTCTATAAA+CGG - chr5.1:57762557-57762576 None:intergenic 30.0%
TCACGACATCAAAAAATTAC+AGG - chr5.1:57759955-57759974 None:intergenic 30.0%
TGACGTAACTATTGCAATAA+TGG + chr5.1:57759661-57759680 MS.gene49485:intron 30.0%
TGCTTGATATATCACACATT+TGG + chr5.1:57761952-57761971 MS.gene49485:intron 30.0%
TTTAGATTATCAGACCATCA+AGG - chr5.1:57762364-57762383 None:intergenic 30.0%
! ATCAATAGGTTTAAAGCTCA+AGG + chr5.1:57761812-57761831 MS.gene49485:CDS 30.0%
! ATTATATTTTGCAGCTTGGA+GGG + chr5.1:57761684-57761703 MS.gene49485:intron 30.0%
! CATTTTCGCTTAATATCGAA+GGG - chr5.1:57762339-57762358 None:intergenic 30.0%
! TACTTTTCCTATCTCTTTCA+AGG + chr5.1:57759626-57759645 MS.gene49485:intron 30.0%
! TATTATATTTTGCAGCTTGG+AGG + chr5.1:57761683-57761702 MS.gene49485:intron 30.0%
! TGGTCTGATAATCTAAAGTT+CGG + chr5.1:57762367-57762386 MS.gene49485:intron 30.0%
! TTGTTTTCTTTGTGCTTCTT+AGG + chr5.1:57762502-57762521 MS.gene49485:intron 30.0%
!! CTGGTGTCTTTAAAACATAT+TGG - chr5.1:57760984-57761003 None:intergenic 30.0%
!! GAGCTTTAAACCTATTGATA+AGG - chr5.1:57761811-57761830 None:intergenic 30.0%
!! TTTATTGTACCACTTTTCCT+TGG - chr5.1:57762631-57762650 None:intergenic 30.0%
!!! CAACAGTACTTTTTTTAGAG+GGG + chr5.1:57760080-57760099 MS.gene49485:intron 30.0%
AAAGCTCTTGATCAGAATGA+AGG - chr5.1:57762741-57762760 None:intergenic 35.0%
AAATCGCTCTCAAATATGAG+TGG - chr5.1:57759754-57759773 None:intergenic 35.0%
ACCTATTGATAAGGTTGCTA+AGG - chr5.1:57761802-57761821 None:intergenic 35.0%
ACCTCTCAAAGAATCTTTGT+TGG - chr5.1:57760588-57760607 None:intergenic 35.0%
ACGTACATCAAGCTTCAAAA+AGG - chr5.1:57760208-57760227 None:intergenic 35.0%
AGTCATGAAAATGAAGACGA+AGG - chr5.1:57758893-57758912 None:intergenic 35.0%
AGTCTTCTCTCCTTTATTAG+AGG - chr5.1:57760558-57760577 None:intergenic 35.0%
ATATTCTCACCAACCTATGT+TGG - chr5.1:57759786-57759805 None:intergenic 35.0%
CATTGATGCCATAAAGTCTA+AGG + chr5.1:57760616-57760635 MS.gene49485:CDS 35.0%
CCAAGTTTAACCTTCCAAAA+TGG - chr5.1:57761710-57761729 None:intergenic 35.0%
CCTATTGATAAGGTTGCTAA+GGG - chr5.1:57761801-57761820 None:intergenic 35.0%
CCTCTCAAAGAATCTTTGTT+GGG - chr5.1:57760587-57760606 None:intergenic 35.0%
CCTTCGATATTAAGCGAAAA+TGG + chr5.1:57762337-57762356 MS.gene49485:intron 35.0%
GAAGGTTAAACTTGGAAGAA+GGG + chr5.1:57761715-57761734 MS.gene49485:CDS 35.0%
GCTACTGCAATGATTAAGAT+GGG + chr5.1:57762832-57762851 MS.gene49485:CDS 35.0%
GTCTTCTCTCCTTTATTAGA+GGG - chr5.1:57760557-57760576 None:intergenic 35.0%
TAAGACTCCTTGAAAGAGAT+AGG - chr5.1:57759636-57759655 None:intergenic 35.0%
TATCACACATTTGGTTGACT+AGG + chr5.1:57761961-57761980 MS.gene49485:intron 35.0%
TATTCTCACCAACCTATGTT+GGG - chr5.1:57759785-57759804 None:intergenic 35.0%
TGCTACTGCAATGATTAAGA+TGG + chr5.1:57762831-57762850 MS.gene49485:CDS 35.0%
! CCATTTTCGCTTAATATCGA+AGG - chr5.1:57762340-57762359 None:intergenic 35.0%
! CGCAAGTGATTAATGAGTTT+TGG - chr5.1:57762473-57762492 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+TGG + chr5.1:57762745-57762764 MS.gene49485:CDS 35.0%
! TGGTACATGTCTTTTTCCTA+TGG + chr5.1:57761865-57761884 MS.gene49485:intron 35.0%
! TTTTCTAAACAGGGTTGTGA+TGG + chr5.1:57760509-57760528 MS.gene49485:intron 35.0%
!! CCATTTTGGAAGGTTAAACT+TGG + chr5.1:57761707-57761726 MS.gene49485:CDS 35.0%
!!! CTTGAGATAGGGTGTTTTTT+TGG + chr5.1:57759921-57759940 MS.gene49485:intron 35.0%
!!! TGAAGTTTTAGGGCAATGAT+AGG - chr5.1:57760447-57760466 None:intergenic 35.0%
AAATTTAGACCGTGTGCATG+TGG + chr5.1:57760319-57760338 MS.gene49485:intron 40.0%
AAGGTTGCTAAGGGTAGAAA+AGG - chr5.1:57761792-57761811 None:intergenic 40.0%
AGCATGACATGAAGTTTACG+TGG - chr5.1:57762004-57762023 None:intergenic 40.0%
AGGAATTGTCCAAGGAAAAG+TGG + chr5.1:57762619-57762638 MS.gene49485:CDS 40.0%
AGGTTGCTAAGGGTAGAAAA+GGG - chr5.1:57761791-57761810 None:intergenic 40.0%
ATGTAGAGAGACTGTAGACT+TGG + chr5.1:57761052-57761071 MS.gene49485:intron 40.0%
ATTCTCACCAACCTATGTTG+GGG - chr5.1:57759784-57759803 None:intergenic 40.0%
ATTTACCATGTCCCCAACAT+AGG + chr5.1:57759770-57759789 MS.gene49485:intron 40.0%
CCCAACAAAGATTCTTTGAG+AGG + chr5.1:57760584-57760603 MS.gene49485:CDS 40.0%
CCCTTAGCAACCTTATCAAT+AGG + chr5.1:57761798-57761817 MS.gene49485:CDS 40.0%
CTCACACAATTGGAAAAGCA+AGG + chr5.1:57762527-57762546 MS.gene49485:CDS 40.0%
GATGACACACCCTCTAATAA+AGG + chr5.1:57760545-57760564 MS.gene49485:CDS 40.0%
GGAAGGTTAAACTTGGAAGA+AGG + chr5.1:57761714-57761733 MS.gene49485:CDS 40.0%
TAAGCGAAAATGGACCTTGA+TGG + chr5.1:57762347-57762366 MS.gene49485:intron 40.0%
TCTACAGTCTCTCTACATCA+AGG - chr5.1:57761050-57761069 None:intergenic 40.0%
TGACTCCACCTTAGACTTTA+TGG - chr5.1:57760627-57760646 None:intergenic 40.0%
TGATGCCATAAAGTCTAAGG+TGG + chr5.1:57760619-57760638 MS.gene49485:CDS 40.0%
TTCTTAGGAGCTCACACAAT+TGG + chr5.1:57762517-57762536 MS.gene49485:intron 40.0%
TTGCTTCCTAATCTCACCTT+TGG - chr5.1:57762881-57762900 None:intergenic 40.0%
TTTGTAAAGCCACATGCACA+CGG - chr5.1:57760331-57760350 None:intergenic 40.0%
! GATCAAGAGCTTTTCAATGG+AGG + chr5.1:57762748-57762767 MS.gene49485:CDS 40.0%
! TCTTGGCTTTCTTGTTGACA+TGG + chr5.1:57761429-57761448 MS.gene49485:intron 40.0%
! TTTTCATGTCGTTACGCTAC+TGG + chr5.1:57759582-57759601 MS.gene49485:intron 40.0%
!! GAATCTGTTTGGTTTGACGA+TGG + chr5.1:57761366-57761385 MS.gene49485:intron 40.0%
!! TGGAGGATCTACTGATTCAT+TGG + chr5.1:57762765-57762784 MS.gene49485:CDS 40.0%
!!! GGTTTGGTGTTTTGAAGTCT+AGG - chr5.1:57762672-57762691 None:intergenic 40.0%
AACAGAATCACGAGCAGCAA+TGG - chr5.1:57760687-57760706 None:intergenic 45.0%
ACAATTCCTCTGCCTTGACT+TGG - chr5.1:57762608-57762627 None:intergenic 45.0%
ACTCTCTACTAAGGACATGG+TGG + chr5.1:57761835-57761854 MS.gene49485:CDS 45.0%
ACTGTTTGCATCATTGAGGC+TGG - chr5.1:57761753-57761772 None:intergenic 45.0%
AGCCTCAATGATGCAAACAG+TGG + chr5.1:57761752-57761771 MS.gene49485:CDS 45.0%
AGCTCAAGGACTCTCTACTA+AGG + chr5.1:57761826-57761845 MS.gene49485:CDS 45.0%
AGGACTCTCTACTAAGGACA+TGG + chr5.1:57761832-57761851 MS.gene49485:CDS 45.0%
CACCACTGTTTGCATCATTG+AGG - chr5.1:57761757-57761776 None:intergenic 45.0%
GACTGTAGACTTGGATGAAG+TGG + chr5.1:57761061-57761080 MS.gene49485:intron 45.0%
GCAAGGTGTACCGTTTATAG+AGG + chr5.1:57762544-57762563 MS.gene49485:CDS 45.0%
GTGAGATTAGGAAGCAATGC+AGG + chr5.1:57762884-57762903 MS.gene49485:CDS 45.0%
TATTTGCCAAGTCAAGGCAG+AGG + chr5.1:57762599-57762618 MS.gene49485:CDS 45.0%
TTGCTAAGGGTAGAAAAGGG+AGG - chr5.1:57761788-57761807 None:intergenic 45.0%
!! GTACTCTGACTCTAGAGTCT+TGG + chr5.1:57762191-57762210 MS.gene49485:intron 45.0%
ACCAACCTATGTTGGGGACA+TGG - chr5.1:57759778-57759797 None:intergenic 50.0%
ACCATGTCCCCAACATAGGT+TGG + chr5.1:57759774-57759793 MS.gene49485:intron 50.0%
ATCAGCACATGAGACCACAC+CGG - chr5.1:57760657-57760676 None:intergenic 50.0%
CAAGGCAGAGGAATTGTCCA+AGG + chr5.1:57762611-57762630 MS.gene49485:CDS 50.0%
CTAAGGGTAGAAAAGGGAGG+TGG - chr5.1:57761785-57761804 None:intergenic 50.0%
GGCATGACATGCAATGTACG+TGG - chr5.1:57761242-57761261 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+GGG + chr5.1:57759025-57759044 MS.gene49485:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + chr5.1:57759024-57759043 MS.gene49485:intron 50.0%
!! AAGGACATGGTGGCCTTATC+TGG + chr5.1:57761845-57761864 MS.gene49485:CDS 50.0%
AAGGTGGAGTCAGTATGCCC+CGG + chr5.1:57760635-57760654 MS.gene49485:CDS 55.0%
TCAGCACATGAGACCACACC+GGG - chr5.1:57760656-57760675 None:intergenic 55.0%
! TGCAGCTTGGAGGGCCATTT+TGG + chr5.1:57761693-57761712 MS.gene49485:intron 55.0%
!! GCTTGGAGGGCCATTTTGGA+AGG + chr5.1:57761697-57761716 MS.gene49485:intron 55.0%
CAGCACATGAGACCACACCG+GGG - chr5.1:57760655-57760674 None:intergenic 60.0%
GGAGTCAGTATGCCCCGGTG+TGG + chr5.1:57760640-57760659 MS.gene49485:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 57758876 57762918 57758876 ID=MS.gene49485
chr5.1 mRNA 57758876 57762918 57758876 ID=MS.gene49485.t1;Parent=MS.gene49485
chr5.1 exon 57758876 57758923 57758876 ID=MS.gene49485.t1.exon1;Parent=MS.gene49485.t1
chr5.1 CDS 57758876 57758923 57758876 ID=cds.MS.gene49485.t1;Parent=MS.gene49485.t1
chr5.1 exon 57760521 57760712 57760521 ID=MS.gene49485.t1.exon2;Parent=MS.gene49485.t1
chr5.1 CDS 57760521 57760712 57760521 ID=cds.MS.gene49485.t1;Parent=MS.gene49485.t1
chr5.1 exon 57761698 57761866 57761698 ID=MS.gene49485.t1.exon3;Parent=MS.gene49485.t1
chr5.1 CDS 57761698 57761866 57761698 ID=cds.MS.gene49485.t1;Parent=MS.gene49485.t1
chr5.1 exon 57762524 57762918 57762524 ID=MS.gene49485.t1.exon4;Parent=MS.gene49485.t1
chr5.1 CDS 57762524 57762918 57762524 ID=cds.MS.gene49485.t1;Parent=MS.gene49485.t1
Gene Sequence

>MS.gene49485

ATGGGAGGATCTCTCCTTCGTCTTCATTTTCATGACTGCTTTGTCAATGTAAATTAATCTTCAAATTAAGTTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGTGTTTTTTTCTTTAGTTATATATTGTTATATACCATTACTATGATCAACTACTAAGAAAACTTGCTAGAGAAATTGAGAGAGAAAACATGAATATTTTCTCTAAATCCGTCACGAATTTAATGATGATGAAATTAGAGAAATATTTCATTTTTTTTGTCACTAATTTTTTTTCTCTATTATTATTATATATCATTACTATATTATCTACTACTAATAAAACTAACGAGAAAAATTTAGATTAGGTAAATTTTGTGATGATAGTATTAGAAAGTGATTTCATTTCTTCCTCGATAAATTTTGGCGTAATTTATTTTTTCTAATAGTGATATATAATCAATGTTATTATTTTTTTGACAAATAATCCATATTATTATTTAGTAACCAATTGTTCATATGAGGATTTCAAATGTGAAAATAAAAATATTAATATAGATAATAGATTGAATATATTATTTTTTGGTAGTTTGATAATGAGTTGAATATGACCAGTGAGTAATATTGAGTGAATTGAATAGGGTCATATACACTTTTCATGTCGTTACGCTACTGGACTATTTATACTTTATTTTTATACTTTTCCTATCTCTTTCAAGGAGTCTTATTGAGTGACGTAACTATTGCAATAATGGAACATTTCATGCATAATTGAAAAAGAAGTAAAATGAACTGTCTATTGTTTGCATGAAATATTATGCACCACTCATATTTGAGAGCGATTTACCATGTCCCCAACATAGGTTGGTGAGAATATATTTAAAAAAAATTAGCCAAAAAATTACTAAATTTGTGTCGGTTGAATGTGAATTTTTAAACAATTTCCTATTTGAATATGTACTAAATTATGCATGGATATCTACTTTTAAATTCTTGAGATAGGGTGTTTTTTTGGCAAGTACCCCTGTAATTTTTTGATGTCGTGAGCTAAATACTCTTTGTACTTATCCCCTTAATCTTTATCTAATAAATTTGGCTGTTCAACAGAAATTTCTTTTAGAAACATGGAAGTTTTTTAATAGTAATGAAAACAACAGTACTTTTTTTAGAGGGGCAAACAACAGTACAAATTAGTCTTTTATTTCTTGTTAAAAAGATTAACTGTTTATTTGCATTGCGAATAAGAATATTCTGAACAAAAAAGTAAAAGATAAATCCTTTTTGAAGCTTGATGTACGTGTGCTAACAAATAGTTTATATTCAAGTCCGACGTTCTTTACTTTAAACATACACCTCATATTATTTAGACATGCGTTACAAACTATTTTACAAATTTAGACCGTGTGCATGTGGCTTTACAAATTCAACCATATTTAGCATATCAGACAATTTAAATGTGATTGACTACGCGCAATCGAATAATTTTAAATTGTAAACAACTCAAATTCTTATTTACCTATCATTGCCCTAAAACTTCATAAACATAGGATTTTGGTGAACTTACTTATCATAAATCACTTTTTTCTAAACAGGGTTGTGATGGATCAGTGCTACTTGATGACACACCCTCTAATAAAGGAGAGAAGACTGCACTTCCCAACAAAGATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGTCAGTATGCCCCGGTGTGGTCTCATGTGCTGATATCTTAGCCATTGCTGCTCGTGATTCTGTTGTAAATGTGAGTACAAAATCAATATGCTAAACATTGAATTTTTAGTAATTTTTCAAATGTAAATTAACTACCAGAAAAAGTTTAATAATGAACGAAAATAGATACGTAAAAGTTTAATAATGAACGAAAATAGATACTTAAAACATAGAATTGACATCTAATTATTTTGGTGTTTGTAAAATGGGCGTAGTGATTTGTTTTTTTTTATTTTTAGAAATTATATATTTGCTTCATTAAATTAGTTGCTTAAATATAATGTTTACAAGTCTTGGTACCAATATGTTTTAAAGACACCAGAAAATTATCAGCAAAAACTATAAAATATTGAAATTCAGAGCAGCCTTGATGTAGAGAGACTGTAGACTTGGATGAAGTGGAATTTGATACTTGCATAAATTATATTATCCAACAAGTTATATGCACATATTAGTTTATTTTTATTGAAGAGATTTTTAATGGAATAGTCATAGAAACAAAGTTATATCATATATTTACAATAATAAAATATAGATCAAGTGTGACGTTTAAACAACCACGTACATTGCATGTCATGCCAATTTTCGTTTTGTTCTAGTAAGTGACTTTAAATATAAAAGACACACACATATTTATGAATTAATTATTGCTTCACAATAATTTATACTAATAATAATTTCGAAGAATCTGTTTGGTTTGACGATGGAAGTGTCAACATGACGTTTAAACGAGTGAGAAGATATAATTCTTGGCTTTCTTGTTGACATGGTTTTCTGCCTTGATTTTGCTAAACATAACTTCTTACATAAAATATACAAGCTAAATAATGATACATATAGATGCTTAATTAATCTAACACTCATTTTTTTTTTGTTGTTGTCAAACTAAAAAAATGGTATAATATATAATTTATAAAAATTTAAAAATCCTCATTTCTTTTCTTCTAATAAATGCTTATATTTTCATTCTATCATATTAGTTTTTAAATTTATTTTTATTCTATTATATTTTGCAGCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCCAGCCTCAATGATGCAAACAGTGGTGTAATTCCACCTCCCTTTTCTACCCTTAGCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTGGCCTTATCTGGTACATGTCTTTTTCCTATGGTATCTAATTTAAACATTTTTTCTTCTAACTTCCATTATTATGATACAATTATTAGTTTTTATTTTGCTTGATATATCACACATTTGGTTGACTAGGATGTGATGTTTAAACAACCACGTAAACTTCATGTCATGCTTAATTTTCGTTTTGTTTTAAGTGACTTCTAATAAAAAAAAAGAACAATGACACAAAAAACATGTTTATCCAACCAAGAAAATACATTTAATTATTGGTTATGTTTGAATAATGTTTCCAAAGTTAAAATGAATAGTAACACCGTTTAGATTTCATTTTCAACACTTAGTACTCTGACTCTAGAGTCTTGGAATATACAAATTCAACTTACATAGCACTATTGATTAATAAATCTAAATATTATTTGAACATTAAGAAATTATTCAAGTGCCAAATTCAACTTACATAACACTATTTATTTTTTTAGTTTCAACCCTTCGATATTAAGCGAAAATGGACCTTGATGGTCTGATAATCTAAAGTTCGGTCTGAATATAAGTAAAATCTTATTAAAGATTGTCTCAAACATAATTCAAATTCGAATTCTCTTGAACGATTCGTTACGAACCAAAACTCATTAATCACTTGCGTCTAACTATTTGTTTTCTTTGTGCTTCTTAGGAGCTCACACAATTGGAAAAGCAAGGTGTACCGTTTATAGAGGTCGTATTTACAATCATACAAATATTGATAGTTTATTTGCCAAGTCAAGGCAGAGGAATTGTCCAAGGAAAAGTGGTACAATAAAAGACAACAATGTAGCTGTCCTAGACTTCAAAACACCAAACCATTTTGATAACTTATACTACAAGAATCTCATTAACAAAAAGGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACTGATTCATTGGTTAAATCTTATAGTAATAATCAAAATGCATTTGAATCAGATTTTGCTACTGCAATGATTAAGATGGGAAATAACAATCCTCTTACCGGATCCAAAGGTGAGATTAGGAAGCAATGCAGGAGAGCCAATTAA
Protein sequence

>MS.gene49485.t1

MGGSLLRLHFHDCFVNGCDGSVLLDDTPSNKGEKTALPNKDSLRGFEVIDAIKSKVESVCPGVVSCADILAIAARDSVVNLGGPFWKVKLGRRDSKTASLNDANSGVIPPPFSTLSNLINRFKAQGLSTKDMVALSGAHTIGKARCTVYRGRIYNHTNIDSLFAKSRQRNCPRKSGTIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQNAFESDFATAMIKMGNNNPLTGSKGEIRKQCRRAN