Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49661.t1 | XP_007157557.1 | 73 | 137 | 37 | 0 | 38 | 174 | 55 | 191 | 1.40E-41 | 179.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49661.t1 | F4I3V6 | 58.9 | 90 | 37 | 0 | 74 | 163 | 97 | 186 | 1.9e-20 | 100.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49661.t1 | G7K712 | 88.3 | 137 | 16 | 0 | 38 | 174 | 56 | 192 | 9.8e-42 | 179.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene49661 | 0.830422 | 2.96E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene49661 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene49661 | 0.804 | 2.67E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene49661 | 0.809409 | 1.92E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49661.t1 | MTR_5g037230 | 95.620 | 137 | 6 | 0 | 38 | 174 | 56 | 192 | 2.35e-72 | 216 |
| MS.gene49661.t1 | MTR_3g040420 | 82.222 | 45 | 8 | 0 | 38 | 82 | 56 | 100 | 1.50e-19 | 79.3 |
| MS.gene49661.t1 | MTR_0065s0080 | 86.667 | 45 | 6 | 0 | 38 | 82 | 56 | 100 | 6.12e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49661.t1 | AT1G69935 | 70.000 | 90 | 27 | 0 | 74 | 163 | 97 | 186 | 5.34e-40 | 134 |
| MS.gene49661.t1 | AT4G33780 | 51.111 | 90 | 44 | 0 | 73 | 162 | 95 | 184 | 2.17e-26 | 99.8 |
| MS.gene49661.t1 | AT1G69935 | 71.930 | 57 | 16 | 0 | 74 | 130 | 97 | 153 | 2.23e-21 | 85.5 |
Find 33 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTATTTGCTGCAATTT+TGG | 0.129989 | 5.1:+27886117 | MS.gene49661:CDS |
| CTCATAGTCACGATACTATT+TGG | 0.202722 | 5.1:-27881452 | None:intergenic |
| TGTTTAAGAAAATGTCTAAA+AGG | 0.262129 | 5.1:+27883528 | MS.gene49661:CDS |
| AATGTCTAAAAGGGCTAAAA+AGG | 0.323229 | 5.1:+27883538 | MS.gene49661:CDS |
| TTGCAGGTCATCTGCAACAT+TGG | 0.387086 | 5.1:+27886091 | MS.gene49661:intron |
| ACGATACTATTTGGCTCGTT+AGG | 0.410737 | 5.1:-27881443 | None:intergenic |
| ATGGTTGGTGATTCCTTTAG+TGG | 0.426285 | 5.1:+27881392 | MS.gene49661:CDS |
| AATCAAGGGAACAATTCCTT+TGG | 0.435782 | 5.1:+27886196 | MS.gene49661:CDS |
| ACACCTTCATCAATCTCATA+TGG | 0.466013 | 5.1:-27883416 | None:intergenic |
| TTGATTGAAACTATTCCCAT+TGG | 0.473388 | 5.1:-27886179 | None:intergenic |
| TTTGGCCCTGCGTGTGATAT+GGG | 0.475980 | 5.1:+27886135 | MS.gene49661:CDS |
| GTTTCTCACTTCCAGTCCAA+TGG | 0.484407 | 5.1:+27886163 | MS.gene49661:CDS |
| GGCATCCTTCATCCCACTAA+AGG | 0.490013 | 5.1:-27881405 | None:intergenic |
| TTTCTCACTTCCAGTCCAAT+GGG | 0.491752 | 5.1:+27886164 | MS.gene49661:CDS |
| AATGGGAATAGTTTCAATCA+AGG | 0.493079 | 5.1:+27886181 | MS.gene49661:CDS |
| GTTTAAGAAAATGTCTAAAA+GGG | 0.503270 | 5.1:+27883529 | MS.gene49661:CDS |
| TGAAACTATTCCCATTGGAC+TGG | 0.507228 | 5.1:-27886174 | None:intergenic |
| TGATTCCTTTAGTGGGATGA+AGG | 0.510187 | 5.1:+27881400 | MS.gene49661:CDS |
| AAGGAGAAACTTACGAGTTG+AGG | 0.534806 | 5.1:-27883593 | None:intergenic |
| TGGTTGGTGATTCCTTTAGT+GGG | 0.550162 | 5.1:+27881393 | MS.gene49661:CDS |
| CAGGTCATCTGCAACATTGG+AGG | 0.554407 | 5.1:+27886094 | MS.gene49661:intron |
| CGAGGTAGAGAAAGTATGGT+TGG | 0.559506 | 5.1:+27881377 | None:intergenic |
| ATGGGAATAGTTTCAATCAA+GGG | 0.569470 | 5.1:+27886182 | MS.gene49661:CDS |
| TGTCTAGGCTATAGCACCAA+AGG | 0.578357 | 5.1:-27886212 | None:intergenic |
| TGTTGTCAAAGCACTTCTTG+AGG | 0.596810 | 5.1:+27885232 | MS.gene49661:CDS |
| AGCTGCCCATATCACACGCA+GGG | 0.602607 | 5.1:-27886140 | None:intergenic |
| GAACCATATGAGATTGATGA+AGG | 0.606231 | 5.1:+27883413 | MS.gene49661:CDS |
| AGTTGAGGAGATATCACTGT+AGG | 0.617126 | 5.1:-27883578 | None:intergenic |
| CAGCTGCCCATATCACACGC+AGG | 0.644863 | 5.1:-27886141 | None:intergenic |
| GGGATATGATGGGATTGAAG+AGG | 0.656878 | 5.1:+27883445 | MS.gene49661:CDS |
| GTTAGGATTCACCACCTCAG+TGG | 0.704146 | 5.1:-27881426 | None:intergenic |
| GATGAAGGATGCCACTGAGG+TGG | 0.739428 | 5.1:+27881415 | MS.gene49661:CDS |
| TGGGATGAAGGATGCCACTG+AGG | 0.745582 | 5.1:+27881412 | MS.gene49661:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACTTCAATTAAATT+TGG | + | chr5.1:27882881-27882900 | MS.gene49661:intron | 10.0% |
| !! | TTGATTAGAATATATAAAAT+GGG | - | chr5.1:27882666-27882685 | None:intergenic | 10.0% |
| !!! | AAAAAATTGTTTTTAGAAAA+TGG | + | chr5.1:27883319-27883338 | MS.gene49661:intron | 10.0% |
| !!! | AAAAATTGTTTTTAGAAAAT+GGG | + | chr5.1:27883320-27883339 | MS.gene49661:intron | 10.0% |
| !!! | TTAGATTATTCTTATATTTT+TGG | + | chr5.1:27885926-27885945 | MS.gene49661:intron | 10.0% |
| !! | GTTGATTAGAATATATAAAA+TGG | - | chr5.1:27882667-27882686 | None:intergenic | 15.0% |
| !! | TAAGATTATTGTGTAAAAAA+TGG | + | chr5.1:27882385-27882404 | MS.gene49661:intron | 15.0% |
| !! | TGATTAGAATATATAAAATG+GGG | - | chr5.1:27882665-27882684 | None:intergenic | 15.0% |
| !! | TTAGCTAATCTAATATTATT+GGG | - | chr5.1:27882273-27882292 | None:intergenic | 15.0% |
| !!! | AAGTTTTCAATCATATTTAA+TGG | + | chr5.1:27881676-27881695 | MS.gene49661:intron | 15.0% |
| !!! | ACAATAAGAAAATGTTTTTT+TGG | - | chr5.1:27881958-27881977 | None:intergenic | 15.0% |
| !!! | ATGATAGTAATTTAAAATGA+AGG | - | chr5.1:27884515-27884534 | None:intergenic | 15.0% |
| !!! | ATGTTTCAAATTTTAAGATT+GGG | + | chr5.1:27884883-27884902 | MS.gene49661:intron | 15.0% |
| !!! | ATTTTTTATTACAGGTAATA+TGG | - | chr5.1:27884303-27884322 | None:intergenic | 15.0% |
| !!! | CAATTTCTTTCTTTTTTTTT+TGG | - | chr5.1:27882342-27882361 | None:intergenic | 15.0% |
| !!! | TTAAAATTTGAAACATGAAA+AGG | - | chr5.1:27884879-27884898 | None:intergenic | 15.0% |
| !!! | TTATAAAAAGTTGCTATTTT+AGG | + | chr5.1:27882580-27882599 | MS.gene49661:intron | 15.0% |
| !!! | TTTGTGAAAAAAATTTGTTT+GGG | + | chr5.1:27882096-27882115 | MS.gene49661:intron | 15.0% |
| !!! | TTTTGTGAAAAAAATTTGTT+TGG | + | chr5.1:27882095-27882114 | MS.gene49661:intron | 15.0% |
| !! | AAATACGCAAAAAATAACAA+CGG | + | chr5.1:27881989-27882008 | MS.gene49661:intron | 20.0% |
| !! | AATCTAAACATACATTAACA+TGG | - | chr5.1:27883890-27883909 | None:intergenic | 20.0% |
| !! | AATTACATTATCTTTGCTTT+AGG | + | chr5.1:27882015-27882034 | MS.gene49661:intron | 20.0% |
| !! | ATTACATTATCTTTGCTTTA+GGG | + | chr5.1:27882016-27882035 | MS.gene49661:intron | 20.0% |
| !! | ATTTAATGGCGATAAAATAT+TGG | + | chr5.1:27882706-27882725 | MS.gene49661:intron | 20.0% |
| !! | CAGAATAAAAAAGAAAATAG+CGG | - | chr5.1:27885320-27885339 | None:intergenic | 20.0% |
| !! | CTTAGCTAATCTAATATTAT+TGG | - | chr5.1:27882274-27882293 | None:intergenic | 20.0% |
| !! | GACTAAAACTATAAAGTAAA+GGG | - | chr5.1:27882643-27882662 | None:intergenic | 20.0% |
| !! | GCATTTACTATAGTAAATAT+AGG | + | chr5.1:27883956-27883975 | MS.gene49661:intron | 20.0% |
| !! | GTTTAAGAAAATGTCTAAAA+GGG | + | chr5.1:27883529-27883548 | MS.gene49661:CDS | 20.0% |
| !! | TAACTTCAATTAAATTTGGA+TGG | + | chr5.1:27882885-27882904 | MS.gene49661:intron | 20.0% |
| !! | TACTATAGTAAATATAGGTT+AGG | + | chr5.1:27883961-27883980 | MS.gene49661:intron | 20.0% |
| !! | TATTTCATTTAAATGCTCTT+GGG | + | chr5.1:27884241-27884260 | MS.gene49661:intron | 20.0% |
| !! | TGTTTAAGAAAATGTCTAAA+AGG | + | chr5.1:27883528-27883547 | MS.gene49661:CDS | 20.0% |
| !! | TTAATGTATGTTTAGATTTG+TGG | + | chr5.1:27883892-27883911 | MS.gene49661:intron | 20.0% |
| !! | TTAATTCTCTTTCTAGATAA+TGG | + | chr5.1:27885776-27885795 | MS.gene49661:intron | 20.0% |
| !! | TTATATATTCTAATCAACTC+AGG | + | chr5.1:27882669-27882688 | MS.gene49661:intron | 20.0% |
| !! | TTATTTCATTTAAATGCTCT+TGG | + | chr5.1:27884240-27884259 | MS.gene49661:intron | 20.0% |
| !! | TTTAAAAGTGATAAGCAATT+GGG | - | chr5.1:27883825-27883844 | None:intergenic | 20.0% |
| !! | TTTAATGGCGATAAAATATT+GGG | + | chr5.1:27882707-27882726 | MS.gene49661:intron | 20.0% |
| !!! | AATTGTAGTTTTGACAAAAT+AGG | - | chr5.1:27882430-27882449 | None:intergenic | 20.0% |
| !!! | ATATTTTATCGCCATTAAAT+TGG | - | chr5.1:27882706-27882725 | None:intergenic | 20.0% |
| !!! | ATTTTTACCATCCAATTTAA+TGG | + | chr5.1:27882692-27882711 | MS.gene49661:intron | 20.0% |
| !!! | CATGTTTCAAATTTTAAGAT+TGG | + | chr5.1:27884882-27884901 | MS.gene49661:intron | 20.0% |
| !!! | GTAATTTTGGAAGAAAAAAA+TGG | - | chr5.1:27882961-27882980 | None:intergenic | 20.0% |
| !!! | TGTTTCAAATTTTAAGATTG+GGG | + | chr5.1:27884884-27884903 | MS.gene49661:intron | 20.0% |
| !!! | TTGGTTCTAATATTTTTCTT+GGG | + | chr5.1:27882450-27882469 | MS.gene49661:intron | 20.0% |
| !!! | TTTGGTTCTAATATTTTTCT+TGG | + | chr5.1:27882449-27882468 | MS.gene49661:intron | 20.0% |
| !!! | TTTTGTCAAAACTACAATTT+TGG | + | chr5.1:27882431-27882450 | MS.gene49661:intron | 20.0% |
| !!! | TTTTTTTAACTCTATATCCT+TGG | - | chr5.1:27882865-27882884 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGTTCAGTACA+AGG | - | chr5.1:27884714-27884733 | None:intergenic | 20.0% |
| ! | AAAAAATTAAGTCATGACCA+AGG | + | chr5.1:27882845-27882864 | MS.gene49661:intron | 25.0% |
| ! | AATACGCAAAAAATAACAAC+GGG | + | chr5.1:27881990-27882009 | MS.gene49661:intron | 25.0% |
| ! | ACTTCTTGAAAAAAGATGTT+AGG | + | chr5.1:27882192-27882211 | MS.gene49661:intron | 25.0% |
| ! | ATATAAGCTAACCAAAAGTA+TGG | + | chr5.1:27885964-27885983 | MS.gene49661:intron | 25.0% |
| ! | CTAGTGTTTAGAAATCAAAA+TGG | - | chr5.1:27885046-27885065 | None:intergenic | 25.0% |
| ! | GAAAATGTTGACAAAGTAAA+CGG | - | chr5.1:27885451-27885470 | None:intergenic | 25.0% |
| ! | GGACTAAAACTATAAAGTAA+AGG | - | chr5.1:27882644-27882663 | None:intergenic | 25.0% |
| ! | GTTTAAAAGTGATAAGCAAT+TGG | - | chr5.1:27883826-27883845 | None:intergenic | 25.0% |
| ! | TAATCTAATATTATTGGGAG+TGG | - | chr5.1:27882268-27882287 | None:intergenic | 25.0% |
| ! | TCTAGAAAGAGAATTAAGAA+AGG | - | chr5.1:27885773-27885792 | None:intergenic | 25.0% |
| ! | TGATTATTCATGATCACTAA+TGG | - | chr5.1:27883987-27884006 | None:intergenic | 25.0% |
| ! | TGTCTAACTTTCAAAACAAA+GGG | - | chr5.1:27881813-27881832 | None:intergenic | 25.0% |
| ! | TTGTCTAACTTTCAAAACAA+AGG | - | chr5.1:27881814-27881833 | None:intergenic | 25.0% |
| ! | TTTCCTACTTATTCAACTTA+AGG | + | chr5.1:27884394-27884413 | MS.gene49661:intron | 25.0% |
| !! | AATCTTAAGTTCTTGTTTGA+TGG | - | chr5.1:27882372-27882391 | None:intergenic | 25.0% |
| !! | ATCTTTAAAAGCTTAACGTT+CGG | + | chr5.1:27883062-27883081 | MS.gene49661:intron | 25.0% |
| !! | ATGACATTTTTGTATAAACC+GGG | + | chr5.1:27884083-27884102 | MS.gene49661:intron | 25.0% |
| !! | CAACTAATTTAAACGCTTTT+GGG | + | chr5.1:27884593-27884612 | MS.gene49661:intron | 25.0% |
| !! | CATGACATTTTTGTATAAAC+CGG | + | chr5.1:27884082-27884101 | MS.gene49661:intron | 25.0% |
| !! | CATTTAAATTGACTTCTTAG+AGG | + | chr5.1:27884629-27884648 | MS.gene49661:intron | 25.0% |
| !! | GTTTGATTCTGCTTAATTTT+TGG | - | chr5.1:27884997-27885016 | None:intergenic | 25.0% |
| !! | TCAACTAATTTAAACGCTTT+TGG | + | chr5.1:27884592-27884611 | MS.gene49661:intron | 25.0% |
| !! | TCGTAGTTTTTGTAACTTAA+TGG | + | chr5.1:27881610-27881629 | MS.gene49661:intron | 25.0% |
| !! | TTTTTCGTCAACTAATCTAA+TGG | - | chr5.1:27882826-27882845 | None:intergenic | 25.0% |
| !!! | AAACACTACACTCTTTTTTT+TGG | - | chr5.1:27884448-27884467 | None:intergenic | 25.0% |
| !!! | AACACTACACTCTTTTTTTT+GGG | - | chr5.1:27884447-27884466 | None:intergenic | 25.0% |
| !!! | AACGCTACATTTTTTATTAC+AGG | - | chr5.1:27884311-27884330 | None:intergenic | 25.0% |
| !!! | AATTATCACATTCTGAAGTT+TGG | + | chr5.1:27884486-27884505 | MS.gene49661:intron | 25.0% |
| !!! | ACTCTTACACTTTTTGTTAT+TGG | - | chr5.1:27884660-27884679 | None:intergenic | 25.0% |
| !!! | CATTTTGATTTCTAAACACT+AGG | + | chr5.1:27885044-27885063 | MS.gene49661:intron | 25.0% |
| !!! | GGTGCTTTTTTTAAAAGTTT+AGG | + | chr5.1:27885093-27885112 | MS.gene49661:intron | 25.0% |
| !!! | TTTTCATTTTGCGTCTTATT+TGG | + | chr5.1:27885151-27885170 | MS.gene49661:intron | 25.0% |
| AAACAATTATTGTTCCTTGG+TGG | + | chr5.1:27883780-27883799 | MS.gene49661:intron | 30.0% | |
| AAAGCAGAGAAATTCTGTAA+AGG | - | chr5.1:27886011-27886030 | None:intergenic | 30.0% | |
| AACCATCACAAAATTCACTA+AGG | - | chr5.1:27884827-27884846 | None:intergenic | 30.0% | |
| AAGTAGTAGCTAACAACAAT+CGG | + | chr5.1:27886051-27886070 | MS.gene49661:intron | 30.0% | |
| AATCATCAATTGCAATAGCA+AGG | + | chr5.1:27883249-27883268 | MS.gene49661:intron | 30.0% | |
| AATGGGAATAGTTTCAATCA+AGG | + | chr5.1:27886181-27886200 | MS.gene49661:CDS | 30.0% | |
| AATGTCTAAAAGGGCTAAAA+AGG | + | chr5.1:27883538-27883557 | MS.gene49661:CDS | 30.0% | |
| AGTGAACTTGAACAGTTATT+GGG | + | chr5.1:27885896-27885915 | MS.gene49661:intron | 30.0% | |
| AGTTGAATAAGTAGGAAATC+CGG | - | chr5.1:27884392-27884411 | None:intergenic | 30.0% | |
| ATATAAAGTGTAGTGGTTAG+TGG | - | chr5.1:27881652-27881671 | None:intergenic | 30.0% | |
| ATATTATTGGGAGTGGTAAT+TGG | - | chr5.1:27882261-27882280 | None:intergenic | 30.0% | |
| ATGGGAATAGTTTCAATCAA+GGG | + | chr5.1:27886182-27886201 | MS.gene49661:CDS | 30.0% | |
| CCAAGGAACAATAATTGTTT+AGG | - | chr5.1:27883780-27883799 | None:intergenic | 30.0% | |
| CCTAAACAATTATTGTTCCT+TGG | + | chr5.1:27883777-27883796 | MS.gene49661:intron | 30.0% | |
| CTTCAACATATAAAGTGTAG+TGG | - | chr5.1:27881659-27881678 | None:intergenic | 30.0% | |
| GAATTTCTCTGCTTTATAAC+TGG | + | chr5.1:27886016-27886035 | MS.gene49661:intron | 30.0% | |
| GACAACAAAAAAAATGCATC+AGG | - | chr5.1:27881570-27881589 | None:intergenic | 30.0% | |
| GATAACATTTGTGTAGTTTG+AGG | + | chr5.1:27885839-27885858 | MS.gene49661:intron | 30.0% | |
| GTACATCACTAGTAATTAGT+CGG | + | chr5.1:27884737-27884756 | MS.gene49661:intron | 30.0% | |
| GTCTCAAGTAGTGTTTATAA+CGG | - | chr5.1:27885365-27885384 | None:intergenic | 30.0% | |
| TAAGACGCAAAATGAAAAAG+CGG | - | chr5.1:27885149-27885168 | None:intergenic | 30.0% | |
| TACAAAAACTACGAAGTATG+AGG | - | chr5.1:27881604-27881623 | None:intergenic | 30.0% | |
| TAGAATATAAATGTGCTGCA+TGG | + | chr5.1:27885072-27885091 | MS.gene49661:intron | 30.0% | |
| TAGTAGAGTTTGGAAGAAAA+GGG | - | chr5.1:27883208-27883227 | None:intergenic | 30.0% | |
| TCATTTCCTAAAACTTGTGT+TGG | + | chr5.1:27885476-27885495 | MS.gene49661:intron | 30.0% | |
| TGAAGAATGTGAACATTGTT+TGG | - | chr5.1:27883178-27883197 | None:intergenic | 30.0% | |
| TGAGTGATAGAATTGTGTAT+TGG | + | chr5.1:27882064-27882083 | MS.gene49661:intron | 30.0% | |
| TTGATTGAAACTATTCCCAT+TGG | - | chr5.1:27886182-27886201 | None:intergenic | 30.0% | |
| TTTATCGCCATTAAATTGGA+TGG | - | chr5.1:27882702-27882721 | None:intergenic | 30.0% | |
| ! | AAGAGTCTCTTTTCTCATAT+TGG | + | chr5.1:27885655-27885674 | MS.gene49661:intron | 30.0% |
| ! | ATTTTTGTGTGTTAACCCTT+CGG | + | chr5.1:27883650-27883669 | MS.gene49661:intron | 30.0% |
| ! | CAAACATGCAATTTTTCATG+AGG | + | chr5.1:27885012-27885031 | MS.gene49661:intron | 30.0% |
| ! | CTTTTAAACGAGTTATCCTT+AGG | + | chr5.1:27883837-27883856 | MS.gene49661:intron | 30.0% |
| ! | GAAAAAAATTTGTTTGGGAG+AGG | + | chr5.1:27882101-27882120 | MS.gene49661:intron | 30.0% |
| ! | GTAAAACCAACACAAGTTTT+AGG | - | chr5.1:27885485-27885504 | None:intergenic | 30.0% |
| ! | TTCCTAGGTGAAACAATTTT+TGG | - | chr5.1:27883742-27883761 | None:intergenic | 30.0% |
| ! | TTTGTTCTTTTTCCTAACGA+TGG | + | chr5.1:27883016-27883035 | MS.gene49661:intron | 30.0% |
| !! | GTCGTAATTGCTATTTGTAA+TGG | - | chr5.1:27881760-27881779 | None:intergenic | 30.0% |
| !! | TAATTTAAACGCTTTTGGGT+TGG | + | chr5.1:27884597-27884616 | MS.gene49661:intron | 30.0% |
| !! | TCACCTTAAGTTGAATAAGT+AGG | - | chr5.1:27884400-27884419 | None:intergenic | 30.0% |
| !! | TGTGATAGTTTTACAGAGAA+TGG | - | chr5.1:27884041-27884060 | None:intergenic | 30.0% |
| !!! | AATTTAAACGCTTTTGGGTT+GGG | + | chr5.1:27884598-27884617 | MS.gene49661:intron | 30.0% |
| !!! | AGATTGATGAAGGTGTTTTT+GGG | + | chr5.1:27883423-27883442 | MS.gene49661:CDS | 30.0% |
| !!! | AGTTTTGTTATTTTCCCCTA+TGG | + | chr5.1:27881854-27881873 | MS.gene49661:intron | 30.0% |
| !!! | ATTTTGCGTCTTATTTGGAT+CGG | + | chr5.1:27885156-27885175 | MS.gene49661:intron | 30.0% |
| !!! | GAACTCAGTTTTTTATCCTA+AGG | - | chr5.1:27883856-27883875 | None:intergenic | 30.0% |
| !!! | GTTTTGTTATTTTCCCCTAT+GGG | + | chr5.1:27881855-27881874 | MS.gene49661:intron | 30.0% |
| !!! | TGATTTTGAGATTTGAACGA+TGG | - | chr5.1:27883234-27883253 | None:intergenic | 30.0% |
| !!! | TTTAAGATTGGGGTTTTGTT+TGG | + | chr5.1:27884894-27884913 | MS.gene49661:intron | 30.0% |
| !!! | TTTTTTTGGTGTCTTTGTGA+TGG | - | chr5.1:27882328-27882347 | None:intergenic | 30.0% |
| AATCAAGGGAACAATTCCTT+TGG | + | chr5.1:27886196-27886215 | MS.gene49661:CDS | 35.0% | |
| AATGTTGACAAAGTAAACGG+AGG | - | chr5.1:27885448-27885467 | None:intergenic | 35.0% | |
| ACACCTTCATCAATCTCATA+TGG | - | chr5.1:27883419-27883438 | None:intergenic | 35.0% | |
| AGTAGTAGCTAACAACAATC+GGG | + | chr5.1:27886052-27886071 | MS.gene49661:intron | 35.0% | |
| ATCATACTTAGTTTCCACCT+CGG | - | chr5.1:27881518-27881537 | None:intergenic | 35.0% | |
| CAACAATAAAACTCATGAGC+AGG | - | chr5.1:27884165-27884184 | None:intergenic | 35.0% | |
| CTCATAGTCACGATACTATT+TGG | - | chr5.1:27881455-27881474 | None:intergenic | 35.0% | |
| CTTAGTGAAGACTGAAGAAA+AGG | - | chr5.1:27883615-27883634 | None:intergenic | 35.0% | |
| CTTTCAAAACAAAGGGATGA+AGG | - | chr5.1:27881806-27881825 | None:intergenic | 35.0% | |
| GAACAATGTTGGTCATTAAC+AGG | - | chr5.1:27881893-27881912 | None:intergenic | 35.0% | |
| GAACCATATGAGATTGATGA+AGG | + | chr5.1:27883413-27883432 | MS.gene49661:CDS | 35.0% | |
| GAGTGAACTTGAACAGTTAT+TGG | + | chr5.1:27885895-27885914 | MS.gene49661:intron | 35.0% | |
| GTAGTAGAGTTTGGAAGAAA+AGG | - | chr5.1:27883209-27883228 | None:intergenic | 35.0% | |
| GTCGCTTCTAACTTAATCAA+AGG | - | chr5.1:27884215-27884234 | None:intergenic | 35.0% | |
| GTTGAATAAGTAGGAAATCC+GGG | - | chr5.1:27884391-27884410 | None:intergenic | 35.0% | |
| TCATCATAAGCAAGTACGAA+CGG | - | chr5.1:27881709-27881728 | None:intergenic | 35.0% | |
| TGATCAACAACGAACAATGT+TGG | - | chr5.1:27881904-27881923 | None:intergenic | 35.0% | |
| TTATTTGGATCGGGAAATTC+AGG | + | chr5.1:27885166-27885185 | MS.gene49661:intron | 35.0% | |
| TTCACTAAGGAGTTACAAAG+AGG | - | chr5.1:27884814-27884833 | None:intergenic | 35.0% | |
| TTCTTCAGTCTTCACTAAGT+TGG | + | chr5.1:27883616-27883635 | MS.gene49661:intron | 35.0% | |
| TTGAATAAGTAGGAAATCCG+GGG | - | chr5.1:27884390-27884409 | None:intergenic | 35.0% | |
| TTGTAGCTGAATAACTCAAG+TGG | + | chr5.1:27883386-27883405 | MS.gene49661:intron | 35.0% | |
| ! | AAGAAGATAAAGTGCTAGCT+AGG | + | chr5.1:27885550-27885569 | MS.gene49661:intron | 35.0% |
| ! | AGAAGATAAAGTGCTAGCTA+GGG | + | chr5.1:27885551-27885570 | MS.gene49661:intron | 35.0% |
| ! | ATGCAATTTTTCATGAGGCA+TGG | + | chr5.1:27885017-27885036 | MS.gene49661:intron | 35.0% |
| ! | ATTGTTTCTTCACTACTGTG+TGG | + | chr5.1:27885256-27885275 | MS.gene49661:intron | 35.0% |
| ! | CAATTCCAGAACCATACTTT+TGG | - | chr5.1:27885978-27885997 | None:intergenic | 35.0% |
| ! | CTCCTTAGTGAATTTTGTGA+TGG | + | chr5.1:27884822-27884841 | MS.gene49661:intron | 35.0% |
| ! | GAATATTGACTGTGAATTGC+AGG | + | chr5.1:27886075-27886094 | MS.gene49661:intron | 35.0% |
| ! | TTCTTTTTCCTAACGATGGT+GGG | + | chr5.1:27883020-27883039 | MS.gene49661:intron | 35.0% |
| ! | TTTTTGTATAAACCGGGCTT+CGG | + | chr5.1:27884089-27884108 | MS.gene49661:intron | 35.0% |
| !! | CACTGTATTTGCTGCAATTT+TGG | + | chr5.1:27886117-27886136 | MS.gene49661:CDS | 35.0% |
| !! | GAAGCTCACACATTTTAATG+TGG | - | chr5.1:27882801-27882820 | None:intergenic | 35.0% |
| !! | GTTTGGATTAGCTAATCTTG+TGG | + | chr5.1:27884911-27884930 | MS.gene49661:intron | 35.0% |
| !! | TTTTGGGTCAATTAGCATAG+TGG | - | chr5.1:27884431-27884450 | None:intergenic | 35.0% |
| !!! | AAATTTTAACTAGTGTCCCC+GGG | - | chr5.1:27882620-27882639 | None:intergenic | 35.0% |
| !!! | AGGTTTCTTTTGCTGTTGAT+GGG | + | chr5.1:27885186-27885205 | MS.gene49661:intron | 35.0% |
| !!! | ATTGATGAAGGTGTTTTTGG+GGG | + | chr5.1:27883425-27883444 | MS.gene49661:CDS | 35.0% |
| !!! | GAAATTTTAACTAGTGTCCC+CGG | - | chr5.1:27882621-27882640 | None:intergenic | 35.0% |
| !!! | GAGATTGATGAAGGTGTTTT+TGG | + | chr5.1:27883422-27883441 | MS.gene49661:CDS | 35.0% |
| !!! | GATTGATGAAGGTGTTTTTG+GGG | + | chr5.1:27883424-27883443 | MS.gene49661:CDS | 35.0% |
| !!! | TAGGTGAAACAATTTTTGGC+CGG | - | chr5.1:27883738-27883757 | None:intergenic | 35.0% |
| !!! | TTTTGCGTCTTATTTGGATC+GGG | + | chr5.1:27885157-27885176 | MS.gene49661:intron | 35.0% |
| AACATTGCCTCTTACCCAAA+GGG | - | chr5.1:27882223-27882242 | None:intergenic | 40.0% | |
| AAGAGGAGAAGGAAACTTGA+AGG | - | chr5.1:27884797-27884816 | None:intergenic | 40.0% | |
| AAGAGGCAATGTTGAAAGCA+AGG | + | chr5.1:27882230-27882249 | MS.gene49661:intron | 40.0% | |
| AAGGAGAAACTTACGAGTTG+AGG | - | chr5.1:27883596-27883615 | None:intergenic | 40.0% | |
| AAGGAGTTACAAAGAGGAGA+AGG | - | chr5.1:27884808-27884827 | None:intergenic | 40.0% | |
| ACGATGGTTGTAGTAGAGTT+TGG | - | chr5.1:27883218-27883237 | None:intergenic | 40.0% | |
| ACTTGAACAGTTATTGGGAC+TGG | + | chr5.1:27885901-27885920 | MS.gene49661:intron | 40.0% | |
| AGAGGCAATGTTGAAAGCAA+GGG | + | chr5.1:27882231-27882250 | MS.gene49661:intron | 40.0% | |
| AGAGTTTGGAAGAAAAGGGT+TGG | - | chr5.1:27883204-27883223 | None:intergenic | 40.0% | |
| AGATGTTAGGATGAACCCTT+TGG | + | chr5.1:27882205-27882224 | MS.gene49661:intron | 40.0% | |
| AGCTAGGGATGTTGTATTTC+AGG | + | chr5.1:27885566-27885585 | MS.gene49661:intron | 40.0% | |
| AGTTGAGGAGATATCACTGT+AGG | - | chr5.1:27883581-27883600 | None:intergenic | 40.0% | |
| ATATTGTGGTATGCAAGAGC+CGG | + | chr5.1:27884356-27884375 | MS.gene49661:intron | 40.0% | |
| CATCATAAGCAAGTACGAAC+GGG | - | chr5.1:27881708-27881727 | None:intergenic | 40.0% | |
| CGAGTTCGAACTCTCAAAAA+TGG | - | chr5.1:27884541-27884560 | None:intergenic | 40.0% | |
| GATGTTAGGATGAACCCTTT+GGG | + | chr5.1:27882206-27882225 | MS.gene49661:intron | 40.0% | |
| GCAAAATGAAAAAGCGGTCA+AGG | - | chr5.1:27885143-27885162 | None:intergenic | 40.0% | |
| GGCCAAAAATTGTTTCACCT+AGG | + | chr5.1:27883737-27883756 | MS.gene49661:intron | 40.0% | |
| GGGTTAACACACAAAAATGC+CGG | - | chr5.1:27883648-27883667 | None:intergenic | 40.0% | |
| GTAGTAGCTAACAACAATCG+GGG | + | chr5.1:27886053-27886072 | MS.gene49661:intron | 40.0% | |
| TAGCTGAATAACTCAAGTGG+TGG | + | chr5.1:27883389-27883408 | MS.gene49661:intron | 40.0% | |
| TATTATCACCCACCATCGTT+AGG | - | chr5.1:27883031-27883050 | None:intergenic | 40.0% | |
| TGAAACTATTCCCATTGGAC+TGG | - | chr5.1:27886177-27886196 | None:intergenic | 40.0% | |
| TGATTCCTTTAGTGGGATGA+AGG | + | chr5.1:27881400-27881419 | MS.gene49661:CDS | 40.0% | |
| TTCCAAACTACAACGACACT+TGG | + | chr5.1:27882156-27882175 | MS.gene49661:intron | 40.0% | |
| TTTCACCTAGGAATCGAACT+CGG | + | chr5.1:27883749-27883768 | MS.gene49661:intron | 40.0% | |
| TTTCTCACTTCCAGTCCAAT+GGG | + | chr5.1:27886164-27886183 | MS.gene49661:CDS | 40.0% | |
| ! | AACCAAGTGTCGTTGTAGTT+TGG | - | chr5.1:27882161-27882180 | None:intergenic | 40.0% |
| ! | AATGGAAAGCAGAGCATCAA+AGG | - | chr5.1:27881742-27881761 | None:intergenic | 40.0% |
| ! | ACGACGAGTCATTGTGATTT+TGG | - | chr5.1:27883921-27883940 | None:intergenic | 40.0% |
| ! | ACGATACTATTTGGCTCGTT+AGG | - | chr5.1:27881446-27881465 | None:intergenic | 40.0% |
| ! | GAACATTGTTTGGTGAGAAG+TGG | - | chr5.1:27883168-27883187 | None:intergenic | 40.0% |
| ! | GACCCTTGTAATCTAGAGTT+CGG | + | chr5.1:27883694-27883713 | MS.gene49661:intron | 40.0% |
| ! | GATTAGCTAAGCAAGCTGTT+TGG | + | chr5.1:27882283-27882302 | MS.gene49661:intron | 40.0% |
| ! | GCTAACCAAAAGTATGGTTC+TGG | + | chr5.1:27885970-27885989 | MS.gene49661:intron | 40.0% |
| ! | GTTCTTTTTCCTAACGATGG+TGG | + | chr5.1:27883019-27883038 | MS.gene49661:intron | 40.0% |
| ! | TGTTAACCCTTCGGTTTTCA+GGG | + | chr5.1:27883659-27883678 | MS.gene49661:intron | 40.0% |
| ! | TGTTGTCAAAGCACTTCTTG+AGG | + | chr5.1:27885232-27885251 | MS.gene49661:CDS | 40.0% |
| ! | TTAAATGCTCTTGGGTTGCA+TGG | + | chr5.1:27884249-27884268 | MS.gene49661:intron | 40.0% |
| ! | TTCACTAAGTTGGCGAAATC+CGG | + | chr5.1:27883626-27883645 | MS.gene49661:intron | 40.0% |
| ! | TTTTGTATAAACCGGGCTTC+GGG | + | chr5.1:27884090-27884109 | MS.gene49661:intron | 40.0% |
| !! | ACGACACTTGGTTTTCAGAA+TGG | + | chr5.1:27882168-27882187 | MS.gene49661:intron | 40.0% |
| !! | ATGGTTGGTGATTCCTTTAG+TGG | + | chr5.1:27881392-27881411 | MS.gene49661:CDS | 40.0% |
| !! | TGGTTGGTGATTCCTTTAGT+GGG | + | chr5.1:27881393-27881412 | MS.gene49661:CDS | 40.0% |
| !! | TTTTTGAGAGTTCGAACTCG+AGG | + | chr5.1:27884541-27884560 | MS.gene49661:intron | 40.0% |
| !!! | AATTTTAACTAGTGTCCCCG+GGG | - | chr5.1:27882619-27882638 | None:intergenic | 40.0% |
| !!! | CAGGTTTCTTTTGCTGTTGA+TGG | + | chr5.1:27885185-27885204 | MS.gene49661:intron | 40.0% |
| !!! | GTGTTTTTGGGGGATATGAT+GGG | + | chr5.1:27883435-27883454 | MS.gene49661:CDS | 40.0% |
| !!! | GTTTTTTTGGCACCATCGAA+GGG | - | chr5.1:27881945-27881964 | None:intergenic | 40.0% |
| !!! | TGTTTTTTTGGCACCATCGA+AGG | - | chr5.1:27881946-27881965 | None:intergenic | 40.0% |
| AAAGGGCTAAAAAGGCTTCG+AGG | + | chr5.1:27883546-27883565 | MS.gene49661:CDS | 45.0% | |
| AAGCGGTCAAGGACAATTGA+AGG | - | chr5.1:27885132-27885151 | None:intergenic | 45.0% | |
| AAGTGGTGAAGATTGGAACG+TGG | - | chr5.1:27883151-27883170 | None:intergenic | 45.0% | |
| AGGTTGCAACTCATACCCAT+AGG | - | chr5.1:27881873-27881892 | None:intergenic | 45.0% | |
| ATATCCCTACCAACTGCTCA+CGG | - | chr5.1:27884340-27884359 | None:intergenic | 45.0% | |
| CAACATTGCCTCTTACCCAA+AGG | - | chr5.1:27882224-27882243 | None:intergenic | 45.0% | |
| GAGGCAATGTTGAAAGCAAG+GGG | + | chr5.1:27882232-27882251 | MS.gene49661:intron | 45.0% | |
| GATAAGCAATTGGGCTCAAG+TGG | - | chr5.1:27883816-27883835 | None:intergenic | 45.0% | |
| GCTTAACGTTCGGTCTCAAA+TGG | + | chr5.1:27883072-27883091 | MS.gene49661:intron | 45.0% | |
| GGCCGAACTCTAGATTACAA+GGG | - | chr5.1:27883699-27883718 | None:intergenic | 45.0% | |
| GGTTGCAACTCATACCCATA+GGG | - | chr5.1:27881872-27881891 | None:intergenic | 45.0% | |
| GTTGCAACTCATACCCATAG+GGG | - | chr5.1:27881871-27881890 | None:intergenic | 45.0% | |
| GTTTCTCACTTCCAGTCCAA+TGG | + | chr5.1:27886163-27886182 | MS.gene49661:CDS | 45.0% | |
| TATTGTGGTATGCAAGAGCC+GGG | + | chr5.1:27884357-27884376 | MS.gene49661:intron | 45.0% | |
| TCGTTCTCATTTCCCTTCGA+TGG | + | chr5.1:27881930-27881949 | MS.gene49661:intron | 45.0% | |
| TGCATCAGGAAAAGCTACGT+CGG | - | chr5.1:27881556-27881575 | None:intergenic | 45.0% | |
| TGGCCGAACTCTAGATTACA+AGG | - | chr5.1:27883700-27883719 | None:intergenic | 45.0% | |
| TGGTGAGAAGTGGTGAAGAT+TGG | - | chr5.1:27883158-27883177 | None:intergenic | 45.0% | |
| TTCACCTAGGAATCGAACTC+GGG | + | chr5.1:27883750-27883769 | MS.gene49661:intron | 45.0% | |
| TTGCAGGTCATCTGCAACAT+TGG | + | chr5.1:27886091-27886110 | MS.gene49661:intron | 45.0% | |
| ! | GGGATATGATGGGATTGAAG+AGG | + | chr5.1:27883445-27883464 | MS.gene49661:CDS | 45.0% |
| ! | GTGTTAACCCTTCGGTTTTC+AGG | + | chr5.1:27883658-27883677 | MS.gene49661:intron | 45.0% |
| ! | GTTAACCCTTCGGTTTTCAG+GGG | + | chr5.1:27883660-27883679 | MS.gene49661:intron | 45.0% |
| !! | AGCAGTTGGTAGGGATATTG+TGG | + | chr5.1:27884342-27884361 | MS.gene49661:intron | 45.0% |
| !! | TTCCTTTGGTGCTATAGCCT+AGG | + | chr5.1:27886210-27886229 | MS.gene49661:CDS | 45.0% |
| !!! | CTCGAGGTTTTTAGTCGAAC+TGG | + | chr5.1:27884557-27884576 | MS.gene49661:intron | 45.0% |
| !!! | GGTGTTTTTGGGGGATATGA+TGG | + | chr5.1:27883434-27883453 | MS.gene49661:CDS | 45.0% |
| !!! | TTTTGAAGTTGTTAGCGCCG+AGG | + | chr5.1:27881498-27881517 | MS.gene49661:CDS | 45.0% |
| !!! | TTTTTTTTTTTTTGTAATTT+TGG | - | chr5.1:27882974-27882993 | None:intergenic | 5.0% |
| AGAACCCGAGTTCGATTCCT+AGG | - | chr5.1:27883757-27883776 | None:intergenic | 50.0% | |
| ATCGGAATGCAACCCTGAGT+CGG | + | chr5.1:27884114-27884133 | MS.gene49661:intron | 50.0% | |
| ATTGTGGTATGCAAGAGCCG+GGG | + | chr5.1:27884358-27884377 | MS.gene49661:intron | 50.0% | |
| CACCGTAGGGTGAGTTATGT+GGG | + | chr5.1:27885811-27885830 | MS.gene49661:intron | 50.0% | |
| CAGGTCATCTGCAACATTGG+AGG | + | chr5.1:27886094-27886113 | MS.gene49661:intron | 50.0% | |
| CCTATCCCCTGAAAACCGAA+GGG | - | chr5.1:27883668-27883687 | None:intergenic | 50.0% | |
| CTCCCACATAACTCACCCTA+CGG | - | chr5.1:27885816-27885835 | None:intergenic | 50.0% | |
| GCATCAGGAAAAGCTACGTC+GGG | - | chr5.1:27881555-27881574 | None:intergenic | 50.0% | |
| GGATGAACCCTTTGGGTAAG+AGG | + | chr5.1:27882213-27882232 | MS.gene49661:intron | 50.0% | |
| GGCATCCTTCATCCCACTAA+AGG | - | chr5.1:27881408-27881427 | None:intergenic | 50.0% | |
| GTAGGGTGAGTTATGTGGGA+GGG | + | chr5.1:27885815-27885834 | MS.gene49661:intron | 50.0% | |
| GTGGTTAATGAGCTCCACCA+AGG | - | chr5.1:27883797-27883816 | None:intergenic | 50.0% | |
| GTTAGGATTCACCACCTCAG+TGG | - | chr5.1:27881429-27881448 | None:intergenic | 50.0% | |
| TATCCCTACCAACTGCTCAC+GGG | - | chr5.1:27884339-27884358 | None:intergenic | 50.0% | |
| TCTTGTTAACGAGTGCCCCT+GGG | + | chr5.1:27882473-27882492 | MS.gene49661:intron | 50.0% | |
| TTTGGCCCTGCGTGTGATAT+GGG | + | chr5.1:27886135-27886154 | MS.gene49661:CDS | 50.0% | |
| ! | TTTTGGCCCTGCGTGTGATA+TGG | + | chr5.1:27886134-27886153 | MS.gene49661:CDS | 50.0% |
| !! | ATGCTTAAAGAGTGCCCCAG+GGG | - | chr5.1:27882491-27882510 | None:intergenic | 50.0% |
| !! | CATGCTTAAAGAGTGCCCCA+GGG | - | chr5.1:27882492-27882511 | None:intergenic | 50.0% |
| !! | CCTTCGGTTTTCAGGGGATA+GGG | + | chr5.1:27883666-27883685 | MS.gene49661:intron | 50.0% |
| AATGCAACCCTGAGTCGGGT+GGG | + | chr5.1:27884119-27884138 | MS.gene49661:intron | 55.0% | |
| AGCTGCCCATATCACACGCA+GGG | - | chr5.1:27886143-27886162 | None:intergenic | 55.0% | |
| ATAAACCGGGCTTCGGGCAT+CGG | + | chr5.1:27884096-27884115 | MS.gene49661:intron | 55.0% | |
| ATCCCTACCAACTGCTCACG+GGG | - | chr5.1:27884338-27884357 | None:intergenic | 55.0% | |
| CCCTATCCCCTGAAAACCGA+AGG | - | chr5.1:27883669-27883688 | None:intergenic | 55.0% | |
| CGTAGGGTGAGTTATGTGGG+AGG | + | chr5.1:27885814-27885833 | MS.gene49661:intron | 55.0% | |
| CTTGTTAACGAGTGCCCCTG+GGG | + | chr5.1:27882474-27882493 | MS.gene49661:intron | 55.0% | |
| GACTTGCGTGATGCACCGTA+GGG | + | chr5.1:27885798-27885817 | MS.gene49661:intron | 55.0% | |
| GATGAAGGATGCCACTGAGG+TGG | + | chr5.1:27881415-27881434 | MS.gene49661:CDS | 55.0% | |
| GCACCGTAGGGTGAGTTATG+TGG | + | chr5.1:27885810-27885829 | MS.gene49661:intron | 55.0% | |
| GCCACGAGCTAAGTTAGGTC+CGG | + | chr5.1:27883716-27883735 | MS.gene49661:intron | 55.0% | |
| GTTCGGCCACGAGCTAAGTT+AGG | + | chr5.1:27883711-27883730 | MS.gene49661:intron | 55.0% | |
| GTTTAGTCCCCGTGAGCAGT+TGG | + | chr5.1:27884328-27884347 | MS.gene49661:intron | 55.0% | |
| TAGGTCCTTAACCAGTGCCC+CGG | + | chr5.1:27882599-27882618 | MS.gene49661:intron | 55.0% | |
| TCGGAATGCAACCCTGAGTC+GGG | + | chr5.1:27884115-27884134 | MS.gene49661:intron | 55.0% | |
| TGGGATGAAGGATGCCACTG+AGG | + | chr5.1:27881412-27881431 | MS.gene49661:CDS | 55.0% | |
| ! | CAGGAGTTTTGCCGCTCATG+TGG | - | chr5.1:27884146-27884165 | None:intergenic | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+TGG | + | chr5.1:27882472-27882491 | MS.gene49661:intron | 55.0% |
| ! | TGAAGTTGTTAGCGCCGAGG+TGG | + | chr5.1:27881501-27881520 | MS.gene49661:intron | 55.0% |
| !! | CCCTTCGGTTTTCAGGGGAT+AGG | + | chr5.1:27883665-27883684 | MS.gene49661:intron | 55.0% |
| !! | GCATGCTTAAAGAGTGCCCC+AGG | - | chr5.1:27882493-27882512 | None:intergenic | 55.0% |
| AGGTCCTTAACCAGTGCCCC+GGG | + | chr5.1:27882600-27882619 | MS.gene49661:intron | 60.0% | |
| AGTCCCCGTGAGCAGTTGGT+AGG | + | chr5.1:27884332-27884351 | MS.gene49661:intron | 60.0% | |
| ATGTGGTCCCACCCGACTCA+GGG | - | chr5.1:27884129-27884148 | None:intergenic | 60.0% | |
| CAGCTGCCCATATCACACGC+AGG | - | chr5.1:27886144-27886163 | None:intergenic | 60.0% | |
| GAAATCCGGGGTTCGAACCC+CGG | - | chr5.1:27884378-27884397 | None:intergenic | 60.0% | |
| GAATGCAACCCTGAGTCGGG+TGG | + | chr5.1:27884118-27884137 | MS.gene49661:intron | 60.0% | |
| GCCGGACCTAACTTAGCTCG+TGG | - | chr5.1:27883720-27883739 | None:intergenic | 60.0% | |
| GGACTTGCGTGATGCACCGT+AGG | + | chr5.1:27885797-27885816 | MS.gene49661:intron | 60.0% | |
| ! | GTCCCCGTGAGCAGTTGGTA+GGG | + | chr5.1:27884333-27884352 | MS.gene49661:intron | 60.0% |
| AACTAGTGTCCCCGGGGCAC+TGG | - | chr5.1:27882613-27882632 | None:intergenic | 65.0% | |
| AAGAGCCGGGGTTCGAACCC+CGG | + | chr5.1:27884370-27884389 | MS.gene49661:intron | 65.0% | |
| CATGTGGTCCCACCCGACTC+AGG | - | chr5.1:27884130-27884149 | None:intergenic | 65.0% | |
| GCATTCCGATGCCCGAAGCC+CGG | - | chr5.1:27884104-27884123 | None:intergenic | 65.0% | |
| GGTCCTTAACCAGTGCCCCG+GGG | + | chr5.1:27882601-27882620 | MS.gene49661:intron | 65.0% | |
| GTCGGGTGGGACCACATGAG+CGG | + | chr5.1:27884132-27884151 | MS.gene49661:intron | 65.0% | |
| !! | TGTCCCCGGGGCACTGGTTA+AGG | - | chr5.1:27882607-27882626 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 27881392 | 27886231 | 27881392 | ID=MS.gene49661 |
| chr5.1 | mRNA | 27881392 | 27886231 | 27881392 | ID=MS.gene49661.t1;Parent=MS.gene49661 |
| chr5.1 | exon | 27881392 | 27881519 | 27881392 | ID=MS.gene49661.t1.exon1;Parent=MS.gene49661.t1 |
| chr5.1 | CDS | 27881392 | 27881519 | 27881392 | ID=cds.MS.gene49661.t1;Parent=MS.gene49661.t1 |
| chr5.1 | exon | 27883406 | 27883601 | 27883406 | ID=MS.gene49661.t1.exon2;Parent=MS.gene49661.t1 |
| chr5.1 | CDS | 27883406 | 27883601 | 27883406 | ID=cds.MS.gene49661.t1;Parent=MS.gene49661.t1 |
| chr5.1 | exon | 27885188 | 27885253 | 27885188 | ID=MS.gene49661.t1.exon3;Parent=MS.gene49661.t1 |
| chr5.1 | CDS | 27885188 | 27885253 | 27885188 | ID=cds.MS.gene49661.t1;Parent=MS.gene49661.t1 |
| chr5.1 | exon | 27886097 | 27886231 | 27886097 | ID=MS.gene49661.t1.exon4;Parent=MS.gene49661.t1 |
| chr5.1 | CDS | 27886097 | 27886231 | 27886097 | ID=cds.MS.gene49661.t1;Parent=MS.gene49661.t1 |
| Gene Sequence |
| Protein sequence |
