Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49757.t1 | XP_003630450.1 | 98.3 | 540 | 9 | 0 | 1 | 540 | 1 | 540 | 1.80E-209 | 738.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49757.t1 | Q39817 | 86.1 | 481 | 64 | 2 | 1 | 478 | 1 | 481 | 2.3e-160 | 567.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49757.t1 | G7LGJ8 | 98.3 | 540 | 9 | 0 | 1 | 540 | 1 | 540 | 1.3e-209 | 738.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56457 | MS.gene49757 | PPI |
| MS.gene82400 | MS.gene49757 | PPI |
| MS.gene001347 | MS.gene49757 | PPI |
| MS.gene006869 | MS.gene49757 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49757.t1 | MTR_8g095680 | 97.778 | 540 | 12 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1074 |
| MS.gene49757.t1 | MTR_3g098430 | 78.571 | 546 | 106 | 6 | 1 | 540 | 1 | 541 | 0.0 | 798 |
| MS.gene49757.t1 | MTR_3g098430 | 77.818 | 550 | 108 | 6 | 1 | 540 | 1 | 546 | 0.0 | 793 |
| MS.gene49757.t1 | MTR_1g083960 | 40.526 | 380 | 167 | 13 | 36 | 408 | 26 | 353 | 1.86e-60 | 206 |
| MS.gene49757.t1 | MTR_4g068080 | 34.165 | 401 | 182 | 15 | 15 | 400 | 12 | 345 | 3.41e-59 | 202 |
| MS.gene49757.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 1 | 400 | 1 | 346 | 1.39e-58 | 200 |
| MS.gene49757.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 1 | 400 | 1 | 346 | 2.91e-58 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49757.t1 | AT5G61790 | 73.635 | 531 | 133 | 3 | 11 | 540 | 6 | 530 | 0.0 | 786 |
| MS.gene49757.t1 | AT5G07340 | 74.067 | 509 | 122 | 5 | 34 | 538 | 27 | 529 | 0.0 | 747 |
| MS.gene49757.t1 | AT5G07340 | 74.308 | 506 | 120 | 5 | 37 | 538 | 38 | 537 | 0.0 | 744 |
| MS.gene49757.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 5 | 408 | 7 | 351 | 1.95e-61 | 208 |
| MS.gene49757.t1 | AT1G09210 | 38.686 | 411 | 183 | 12 | 5 | 408 | 3 | 351 | 2.02e-61 | 208 |
| MS.gene49757.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 5 | 408 | 7 | 351 | 4.58e-61 | 207 |
| MS.gene49757.t1 | AT1G08450 | 34.588 | 425 | 213 | 15 | 12 | 428 | 10 | 377 | 1.02e-58 | 201 |
| MS.gene49757.t1 | AT1G08450 | 31.059 | 425 | 203 | 15 | 12 | 428 | 10 | 352 | 2.23e-43 | 159 |
| MS.gene49757.t1 | AT1G08450 | 36.207 | 232 | 106 | 6 | 197 | 428 | 134 | 323 | 2.64e-27 | 114 |
Find 151 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGCTGCTTCACAATT+TGG | 0.117242 | 4.4:-7373678 | None:intergenic |
| AATTGAAAATCCAGCTTATA+AGG | 0.199133 | 4.4:+7373767 | MS.gene49757:CDS |
| CAATTTGGGTTAGTAATCTT+AGG | 0.221903 | 4.4:-7373663 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.4:-7373435 | None:intergenic |
| CTCTTTCTCAATAGTAAACT+TGG | 0.257204 | 4.4:-7373973 | None:intergenic |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.4:+7372943 | MS.gene49757:CDS |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.4:-7371382 | None:intergenic |
| TATGCTGGATTCTTCTTCAT+TGG | 0.285014 | 4.4:-7373720 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.4:-7373441 | None:intergenic |
| CAGCTATCGGTATTGAGATT+TGG | 0.301537 | 4.4:+7373862 | MS.gene49757:CDS |
| TCTTCATCGTCCCAATCTTC+TGG | 0.309076 | 4.4:-7373621 | None:intergenic |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.4:+7373159 | MS.gene49757:CDS |
| ATCCAGCTTATAAGGGTATA+TGG | 0.323335 | 4.4:+7373775 | MS.gene49757:CDS |
| ATCCAGCATACAAGGGAAAA+TGG | 0.325180 | 4.4:+7373733 | MS.gene49757:CDS |
| CTCTCCACTGTCTTGGTTAG+TGG | 0.328971 | 4.4:-7375308 | None:intergenic |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.4:+7372908 | MS.gene49757:intron |
| CAGGGGCTGCTTCACAATTT+GGG | 0.337351 | 4.4:-7373677 | None:intergenic |
| AGCTCAAAGTAATCAGGGTT+TGG | 0.338624 | 4.4:-7373813 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.4:-7373423 | None:intergenic |
| GAAACAGAAGGAAGAAGAAA+AGG | 0.367207 | 4.4:+7373995 | MS.gene49757:CDS |
| AGAATCATTGTCAAATTCCT+TGG | 0.371466 | 4.4:-7373139 | None:intergenic |
| CTTCATTCTCTCCACTGTCT+TGG | 0.379721 | 4.4:-7375315 | None:intergenic |
| AGCTGCAATAGGCTCAAAAT+CGG | 0.385593 | 4.4:-7373844 | None:intergenic |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.4:+7373356 | MS.gene49757:CDS |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.4:-7373183 | None:intergenic |
| AATTTGGGTTAGTAATCTTA+GGG | 0.406892 | 4.4:-7373662 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.408900 | 4.4:-7373492 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.4:-7373331 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.4:-7373424 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.4:-7373330 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.4:-7373434 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.4:-7373486 | None:intergenic |
| TCATCATCTAACCATCCTTC+AGG | 0.423626 | 4.4:-7373564 | None:intergenic |
| GAATCATTGTCAAATTCCTT+GGG | 0.434470 | 4.4:-7373138 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.4:-7373412 | None:intergenic |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.4:+7373014 | MS.gene49757:CDS |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.4:-7373456 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.4:-7373163 | None:intergenic |
| CGATGAAGAGGATGGTGAAT+GGG | 0.445046 | 4.4:+7373635 | MS.gene49757:CDS |
| CTGGTTGTGGTGAGTGGAAA+AGG | 0.445292 | 4.4:+7373697 | MS.gene49757:CDS |
| TTTGCAGGATCTCATTGAAA+AGG | 0.448014 | 4.4:+7375063 | MS.gene49757:intron |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.4:+7372944 | MS.gene49757:CDS |
| GCATCCTCATCCCAGTCATC+AGG | 0.452608 | 4.4:-7373507 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.454767 | 4.4:-7371200 | None:intergenic |
| TTCCTTCGTATCGTATTTGG+TGG | 0.456544 | 4.4:+7375151 | MS.gene49757:CDS |
| GGCTACAAAACCAGAAGATT+GGG | 0.458059 | 4.4:+7373611 | MS.gene49757:CDS |
| AGGCTACAAAACCAGAAGAT+TGG | 0.458247 | 4.4:+7373610 | MS.gene49757:CDS |
| ATTGAAAATCCAGCTTATAA+GGG | 0.458787 | 4.4:+7373768 | MS.gene49757:CDS |
| TCAATACCGATAGCTGCAAT+AGG | 0.462507 | 4.4:-7373855 | None:intergenic |
| GTGCAGTAAAGCCTGATGAC+TGG | 0.469031 | 4.4:+7373496 | MS.gene49757:CDS |
| ACGATGAAGAGGATGGTGAA+TGG | 0.471046 | 4.4:+7373634 | MS.gene49757:CDS |
| GAAGAAGAATCCAGCATACA+AGG | 0.471522 | 4.4:+7373725 | MS.gene49757:CDS |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.4:+7373377 | MS.gene49757:CDS |
| GTCTCTTGTGCAGGCAAGAG+TGG | 0.475290 | 4.4:+7375255 | MS.gene49757:intron |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.4:-7373413 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.4:-7373237 | None:intergenic |
| ATAAGATTGCCGCGTCATAC+CGG | 0.480655 | 4.4:+7373934 | MS.gene49757:CDS |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.4:-7373279 | None:intergenic |
| CGTCATACCGGGAGACTACA+TGG | 0.492103 | 4.4:+7373946 | MS.gene49757:CDS |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.4:-7373199 | None:intergenic |
| TCTGGGTCATCTATCTCCTC+AGG | 0.498032 | 4.4:-7373588 | None:intergenic |
| CTGGGATGAGGATGCACCCT+TGG | 0.500943 | 4.4:+7373515 | MS.gene49757:CDS |
| TTCCATATACCCTTATAAGC+TGG | 0.501975 | 4.4:-7373777 | None:intergenic |
| TTGCAGGATCTCATTGAAAA+GGG | 0.502190 | 4.4:+7375064 | MS.gene49757:intron |
| AGAATTCCAACTGTGAGATT+CGG | 0.503519 | 4.4:-7375097 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.4:-7371209 | None:intergenic |
| TTCTTCATCAAGAATTTCCA+AGG | 0.505747 | 4.4:-7373532 | None:intergenic |
| TAAGATTGCCGCGTCATACC+GGG | 0.509139 | 4.4:+7373935 | MS.gene49757:CDS |
| CATCATCGGAAGCATGAAGA+AGG | 0.517297 | 4.4:-7371186 | None:intergenic |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.4:-7373487 | None:intergenic |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.4:+7373445 | MS.gene49757:CDS |
| TTTGAGCCTATTGCAGCTAT+CGG | 0.519883 | 4.4:+7373849 | MS.gene49757:CDS |
| TCTTTCTCAATAGTAAACTT+GGG | 0.520577 | 4.4:-7373972 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.4:-7373162 | None:intergenic |
| ATAAGGGTATATGGAAGCCT+CGG | 0.523060 | 4.4:+7373784 | MS.gene49757:CDS |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.4:-7373080 | None:intergenic |
| AAGCTTGTAGGCACTCAGGA+AGG | 0.524251 | 4.4:-7374237 | None:intergenic |
| TATTGAGATTTGGACAATGC+AGG | 0.530334 | 4.4:+7373872 | MS.gene49757:CDS |
| TGTGAAGCAGCCCCTGGTTG+TGG | 0.538010 | 4.4:+7373684 | MS.gene49757:CDS |
| TAAGGGTATATGGAAGCCTC+GGG | 0.538372 | 4.4:+7373785 | MS.gene49757:CDS |
| TTAGTGGAAGTTTCTGCGGC+GGG | 0.539110 | 4.4:-7375292 | None:intergenic |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.4:+7371381 | MS.gene49757:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.4:+7373057 | MS.gene49757:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.4:+7373175 | MS.gene49757:CDS |
| GATTGGGACGATGAAGAGGA+TGG | 0.545919 | 4.4:+7373627 | MS.gene49757:CDS |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.4:-7373021 | None:intergenic |
| GAATGAAGAAAACAAAGAGG+AGG | 0.550444 | 4.4:+7375330 | MS.gene49757:CDS |
| CCAAATTGTGAAGCAGCCCC+TGG | 0.552013 | 4.4:+7373678 | MS.gene49757:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.4:+7371335 | MS.gene49757:CDS |
| GCTGCAATAGGCTCAAAATC+GGG | 0.552533 | 4.4:-7373843 | None:intergenic |
| GAACGAAAGCGAATTCCTCT+CGG | 0.553910 | 4.4:+7371118 | MS.gene49757:CDS |
| CAGCCCCTGGTTGTGGTGAG+TGG | 0.555593 | 4.4:+7373691 | MS.gene49757:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.4:+7373108 | MS.gene49757:CDS |
| TGGAATTCTTGTAGCCGTTG+TGG | 0.561141 | 4.4:+7375111 | MS.gene49757:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.4:+7373112 | MS.gene49757:CDS |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.4:-7373068 | None:intergenic |
| TGCAGTAAAGCCTGATGACT+GGG | 0.572111 | 4.4:+7373497 | MS.gene49757:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.4:+7373188 | MS.gene49757:CDS |
| ATCGAAGGCTCCACGTCGGA+GGG | 0.574361 | 4.4:+7375357 | MS.gene49757:CDS |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.4:-7373420 | None:intergenic |
| TCCTTCGTATCGTATTTGGT+GGG | 0.575662 | 4.4:+7375152 | MS.gene49757:CDS |
| TGGGCTTCCATGTAGTCTCC+CGG | 0.577142 | 4.4:-7373953 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.4:-7373117 | None:intergenic |
| AGAGAATGAAGAAAACAAAG+AGG | 0.578426 | 4.4:+7375327 | MS.gene49757:CDS |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.4:+7373446 | MS.gene49757:CDS |
| ACGCAGCCGAATCTCACAGT+TGG | 0.579809 | 4.4:+7375091 | MS.gene49757:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.4:+7373069 | MS.gene49757:CDS |
| AGCTTGTAGGCACTCAGGAA+GGG | 0.580489 | 4.4:-7374236 | None:intergenic |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.4:+7373174 | MS.gene49757:CDS |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.4:-7373278 | None:intergenic |
| AGAAGATTGGGACGATGAAG+AGG | 0.591248 | 4.4:+7373623 | MS.gene49757:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.4:+7372927 | MS.gene49757:CDS |
| TTGGTTAGTGGAAGTTTCTG+CGG | 0.593316 | 4.4:-7375296 | None:intergenic |
| CATCGAAGGCTCCACGTCGG+AGG | 0.595933 | 4.4:+7375356 | MS.gene49757:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.4:+7373101 | MS.gene49757:CDS |
| CATCAGGCTTTACTGCACTT+GGG | 0.599406 | 4.4:-7373491 | None:intergenic |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.4:+7372928 | MS.gene49757:CDS |
| GTTAGTGGAAGTTTCTGCGG+CGG | 0.603337 | 4.4:-7375293 | None:intergenic |
| TTTCCACTCACCACAACCAG+GGG | 0.611036 | 4.4:-7373694 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.4:-7373277 | None:intergenic |
| AAGCTGTGAAACCTGAAGGA+TGG | 0.618409 | 4.4:+7373553 | MS.gene49757:CDS |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.4:-7373408 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.4:-7373289 | None:intergenic |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.4:+7373104 | MS.gene49757:CDS |
| TATTGAGAAAGAGAAACAGA+AGG | 0.623870 | 4.4:+7373983 | MS.gene49757:CDS |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.4:-7373276 | None:intergenic |
| TCTTCATCAAGAATTTCCAA+GGG | 0.634894 | 4.4:-7373531 | None:intergenic |
| CAAAGAGGAGGAAACATCGA+AGG | 0.636270 | 4.4:+7375342 | MS.gene49757:CDS |
| ATTTGGGTTAGTAATCTTAG+GGG | 0.637193 | 4.4:-7373661 | None:intergenic |
| GAAAAGGACACTGAATCAAG+TGG | 0.639039 | 4.4:+7374011 | MS.gene49757:CDS |
| GAGATTTGGACAATGCAGGA+TGG | 0.641655 | 4.4:+7373876 | MS.gene49757:CDS |
| AAAGCCTGATGACTGGGATG+AGG | 0.642158 | 4.4:+7373503 | MS.gene49757:CDS |
| TTCCGATGATGCCGATGACG+CGG | 0.642498 | 4.4:+7371198 | MS.gene49757:CDS |
| TCAGGGTTTGGAATATCCCG+AGG | 0.644357 | 4.4:-7373801 | None:intergenic |
| TCCCACCAAATACGATACGA+AGG | 0.645566 | 4.4:-7375153 | None:intergenic |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.4:+7373122 | MS.gene49757:CDS |
| AAGAAGAATCCAGCATACAA+GGG | 0.648479 | 4.4:+7373726 | MS.gene49757:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.4:+7372929 | MS.gene49757:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.4:+7373440 | MS.gene49757:CDS |
| ATGGTTAGATGATGAGCCTG+AGG | 0.657489 | 4.4:+7373572 | MS.gene49757:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.4:+7373072 | MS.gene49757:CDS |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.4:-7373419 | None:intergenic |
| TCTCGCTTTACCCTCCGACG+TGG | 0.660404 | 4.4:-7375367 | None:intergenic |
| TGTAGTCTCCCGGTATGACG+CGG | 0.661561 | 4.4:-7373943 | None:intergenic |
| GAAGAAGCTGTGAAACCTGA+AGG | 0.662222 | 4.4:+7373549 | MS.gene49757:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.4:+7373176 | MS.gene49757:CDS |
| TGAGGAGATAGATGACCCAG+AGG | 0.689200 | 4.4:+7373590 | MS.gene49757:CDS |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.4:-7373288 | None:intergenic |
| ACTTCCACTAACCAAGACAG+TGG | 0.694252 | 4.4:+7375304 | MS.gene49757:CDS |
| TGTCAAGACAATAACCACAA+CGG | 0.738680 | 4.4:-7375125 | None:intergenic |
| AAACATCGAAGGCTCCACGT+CGG | 0.757199 | 4.4:+7375353 | MS.gene49757:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | - | chr4.4:7374446-7374465 | None:intergenic | 0.0% |
| !! | ATAGTTATAGAATATAATAT+TGG | + | chr4.4:7372477-7372496 | MS.gene49757:intron | 10.0% |
| !! | TATAAAAAAAAAAAACATAC+AGG | + | chr4.4:7372017-7372036 | MS.gene49757:intron | 10.0% |
| !!! | ATTGATTTTGTTAATTTTTT+TGG | + | chr4.4:7371525-7371544 | MS.gene49757:intron | 10.0% |
| !! | AAAAAAAAATCAAACAAACA+AGG | + | chr4.4:7371657-7371676 | MS.gene49757:intron | 15.0% |
| !! | AAAAAAAATCAAACAAACAA+GGG | + | chr4.4:7371658-7371677 | MS.gene49757:intron | 15.0% |
| !! | AATAATAAATATTGACATCA+AGG | - | chr4.4:7371818-7371837 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAATTCTTGT+AGG | + | chr4.4:7371593-7371612 | MS.gene49757:intron | 15.0% |
| !! | TTTCATTAATTGTGAATTAA+TGG | + | chr4.4:7371449-7371468 | MS.gene49757:intron | 15.0% |
| !!! | ACTATTTTTGACAAAAAAAT+TGG | - | chr4.4:7372054-7372073 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAGATTTGAAAT+TGG | - | chr4.4:7371581-7371600 | None:intergenic | 15.0% |
| !! | ATATTCTATAACTATTTCAG+AGG | - | chr4.4:7372472-7372491 | None:intergenic | 20.0% |
| !! | ATGATTATGAAAATAAGAGT+CGG | + | chr4.4:7372563-7372582 | MS.gene49757:intron | 20.0% |
| !! | TAGAATATAATATTGGAAAG+TGG | + | chr4.4:7372484-7372503 | MS.gene49757:intron | 20.0% |
| !! | TATTCTATAACTATTTCAGA+GGG | - | chr4.4:7372471-7372490 | None:intergenic | 20.0% |
| !! | TTTAACAGTATATGTATTTG+TGG | + | chr4.4:7372517-7372536 | MS.gene49757:intron | 20.0% |
| !!! | TCATCTTCTCTTTTTTTTTT+TGG | + | chr4.4:7371225-7371244 | MS.gene49757:intron | 20.0% |
| !!! | TTCAACTTTAATTTTTCAAG+TGG | + | chr4.4:7372250-7372269 | MS.gene49757:intron | 20.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | - | chr4.4:7374669-7374688 | None:intergenic | 25.0% |
| ! | AATTGAAAATCCAGCTTATA+AGG | + | chr4.4:7373767-7373786 | MS.gene49757:CDS | 25.0% |
| ! | ACATTTCCTTTATCTTTCTT+TGG | + | chr4.4:7374599-7374618 | MS.gene49757:intron | 25.0% |
| ! | ACCGTTATATTCATTCTTAT+CGG | - | chr4.4:7371385-7371404 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCAGCTTATAA+GGG | + | chr4.4:7373768-7373787 | MS.gene49757:CDS | 25.0% |
| ! | ATTTCCTATATGTTAATCAC+CGG | + | chr4.4:7375227-7375246 | MS.gene49757:intron | 25.0% |
| ! | CCTTTCTTAGAAAATATGAT+TGG | - | chr4.4:7372614-7372633 | None:intergenic | 25.0% |
| ! | TAAAATCATGCATAAGAAAG+AGG | - | chr4.4:7374161-7374180 | None:intergenic | 25.0% |
| ! | TAGTATAAGCCATTGATAAA+GGG | - | chr4.4:7372168-7372187 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr4.4:7374942-7374961 | None:intergenic | 25.0% |
| ! | TCCGATAAGAATGAATATAA+CGG | + | chr4.4:7371381-7371400 | MS.gene49757:CDS | 25.0% |
| ! | TCTTTCTCAATAGTAAACTT+GGG | - | chr4.4:7373975-7373994 | None:intergenic | 25.0% |
| ! | TTAGTATAAGCCATTGATAA+AGG | - | chr4.4:7372169-7372188 | None:intergenic | 25.0% |
| ! | TTGTTAGCATATCTTAAACA+AGG | + | chr4.4:7372280-7372299 | MS.gene49757:intron | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | - | chr4.4:7374435-7374454 | None:intergenic | 25.0% |
| !! | AAAAAATTCTTGTAGGTTGA+AGG | + | chr4.4:7371600-7371619 | MS.gene49757:intron | 25.0% |
| !! | AAATGATAACAGAGTTGTTT+TGG | - | chr4.4:7375211-7375230 | None:intergenic | 25.0% |
| !! | ATAAGCTGGATTTTCAATTA+GGG | - | chr4.4:7373766-7373785 | None:intergenic | 25.0% |
| !! | GTTTGTTTGATGATTGAATT+TGG | + | chr4.4:7371249-7371268 | MS.gene49757:intron | 25.0% |
| !! | TATAAGCTGGATTTTCAATT+AGG | - | chr4.4:7373767-7373786 | None:intergenic | 25.0% |
| !! | TTGTTTAAGATATGCTAACA+AGG | - | chr4.4:7372281-7372300 | None:intergenic | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | + | chr4.4:7374663-7374682 | MS.gene49757:intron | 25.0% |
| !! | TTTTAAGCTCAAAGTAATCA+GGG | - | chr4.4:7373821-7373840 | None:intergenic | 25.0% |
| !! | TTTTTATGAGGCTTAAATTG+AGG | + | chr4.4:7371282-7371301 | MS.gene49757:intron | 25.0% |
| !!! | AAAGCTAAATTTTAAGGACA+AGG | - | chr4.4:7372731-7372750 | None:intergenic | 25.0% |
| !!! | AATTTGGGTTAGTAATCTTA+GGG | - | chr4.4:7373665-7373684 | None:intergenic | 25.0% |
| !!! | CATTTCACCAATTACTTTTA+GGG | - | chr4.4:7371941-7371960 | None:intergenic | 25.0% |
| !!! | CCAATCATATTTTCTAAGAA+AGG | + | chr4.4:7372611-7372630 | MS.gene49757:intron | 25.0% |
| !!! | CTTTAATTTTTCAAGTGGTA+CGG | + | chr4.4:7372255-7372274 | MS.gene49757:intron | 25.0% |
| !!! | TACATGTATTTTAAGCTTGT+AGG | - | chr4.4:7374252-7374271 | None:intergenic | 25.0% |
| !!! | TCTAATTTGTTAAACACGAA+AGG | - | chr4.4:7371848-7371867 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCTCAAAGTAATC+AGG | - | chr4.4:7373822-7373841 | None:intergenic | 25.0% |
| AAAATTTGCAACTCATTGTC+GGG | - | chr4.4:7373333-7373352 | None:intergenic | 30.0% | |
| AAATGCTAATGTGTTTCCTT+AGG | + | chr4.4:7371956-7371975 | MS.gene49757:intron | 30.0% | |
| AAATGGTAAAAAGCAACATG+TGG | - | chr4.4:7372106-7372125 | None:intergenic | 30.0% | |
| AACATTCCTCTCTACTTATA+AGG | - | chr4.4:7371887-7371906 | None:intergenic | 30.0% | |
| AACTATGCCCTAAAAGTAAT+TGG | + | chr4.4:7371931-7371950 | MS.gene49757:intron | 30.0% | |
| AATATTGACGATTAAGAGAG+TGG | - | chr4.4:7374792-7374811 | None:intergenic | 30.0% | |
| AATGCTAATGTGTTTCCTTA+GGG | + | chr4.4:7371957-7371976 | MS.gene49757:intron | 30.0% | |
| ACTCTTGAAAAGTAGTATAG+TGG | + | chr4.4:7371752-7371771 | MS.gene49757:intron | 30.0% | |
| AGAATCATTGTCAAATTCCT+TGG | - | chr4.4:7373142-7373161 | None:intergenic | 30.0% | |
| AGAGAATGAAGAAAACAAAG+AGG | + | chr4.4:7375327-7375346 | MS.gene49757:CDS | 30.0% | |
| ATCAAGTCACTATAACTGAA+GGG | - | chr4.4:7372846-7372865 | None:intergenic | 30.0% | |
| ATTAACAAACACAAGAAACC+AGG | - | chr4.4:7374843-7374862 | None:intergenic | 30.0% | |
| CAAAATTTGCAACTCATTGT+CGG | - | chr4.4:7373334-7373353 | None:intergenic | 30.0% | |
| CTCTACTTATAAGGATGTAA+GGG | - | chr4.4:7371878-7371897 | None:intergenic | 30.0% | |
| CTCTTTCTCAATAGTAAACT+TGG | - | chr4.4:7373976-7373995 | None:intergenic | 30.0% | |
| GAAACCCTAATTTCTTAGAA+AGG | - | chr4.4:7374670-7374689 | None:intergenic | 30.0% | |
| GAATCATTGTCAAATTCCTT+GGG | - | chr4.4:7373141-7373160 | None:intergenic | 30.0% | |
| TATCAAGTCACTATAACTGA+AGG | - | chr4.4:7372847-7372866 | None:intergenic | 30.0% | |
| TATTGAGAAAGAGAAACAGA+AGG | + | chr4.4:7373983-7374002 | MS.gene49757:CDS | 30.0% | |
| TCTCTACTTATAAGGATGTA+AGG | - | chr4.4:7371879-7371898 | None:intergenic | 30.0% | |
| TCTTCATCAAGAATTTCCAA+GGG | - | chr4.4:7373534-7373553 | None:intergenic | 30.0% | |
| TGTGTAGATTCACAAATTTC+TGG | + | chr4.4:7372640-7372659 | MS.gene49757:intron | 30.0% | |
| TTACATCCTTATAAGTAGAG+AGG | + | chr4.4:7371878-7371897 | MS.gene49757:intron | 30.0% | |
| TTCTTCATCAAGAATTTCCA+AGG | - | chr4.4:7373535-7373554 | None:intergenic | 30.0% | |
| TTGTGAATTAATGGAACATG+CGG | + | chr4.4:7371458-7371477 | MS.gene49757:intron | 30.0% | |
| TTTACCATTTGCTTGTGTAA+GGG | + | chr4.4:7372116-7372135 | MS.gene49757:intron | 30.0% | |
| ! | CCATGCAAAGCTAAATTTTA+AGG | - | chr4.4:7372737-7372756 | None:intergenic | 30.0% |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | + | chr4.4:7374662-7374681 | MS.gene49757:intron | 30.0% |
| ! | TAAGCTGGATTTTCAATTAG+GGG | - | chr4.4:7373765-7373784 | None:intergenic | 30.0% |
| ! | TTTTACCATTTGCTTGTGTA+AGG | + | chr4.4:7372115-7372134 | MS.gene49757:intron | 30.0% |
| !! | AAACAAACAAGGGTATTTGT+TGG | + | chr4.4:7371668-7371687 | MS.gene49757:intron | 30.0% |
| !! | ATTTGGGTTAGTAATCTTAG+GGG | - | chr4.4:7373664-7373683 | None:intergenic | 30.0% |
| !! | CAATTTGGGTTAGTAATCTT+AGG | - | chr4.4:7373666-7373685 | None:intergenic | 30.0% |
| !! | CCTTAAAATTTAGCTTTGCA+TGG | + | chr4.4:7372734-7372753 | MS.gene49757:intron | 30.0% |
| !! | GCATTTCACCAATTACTTTT+AGG | - | chr4.4:7371942-7371961 | None:intergenic | 30.0% |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr4.4:7374687-7374706 | MS.gene49757:intron | 30.0% |
| !!! | ACAAATTTCTGGTACTTTTG+TGG | + | chr4.4:7372651-7372670 | MS.gene49757:intron | 30.0% |
| !!! | AGTTGCAAATTTTGATTGAC+GGG | + | chr4.4:7373340-7373359 | MS.gene49757:CDS | 30.0% |
| !!! | CGTCATTCATTTTGAAGTAT+CGG | - | chr4.4:7374355-7374374 | None:intergenic | 30.0% |
| !!! | GAGTTGCAAATTTTGATTGA+CGG | + | chr4.4:7373339-7373358 | MS.gene49757:CDS | 30.0% |
| !!! | GGATCTATGTTGTTTTTATG+AGG | + | chr4.4:7371270-7371289 | MS.gene49757:intron | 30.0% |
| !!! | GTCATTCATTTTGAAGTATC+GGG | - | chr4.4:7374354-7374373 | None:intergenic | 30.0% |
| !!! | TCATTCATTTTGAAGTATCG+GGG | - | chr4.4:7374353-7374372 | None:intergenic | 30.0% |
| AAAACCCTTACACAAGCAAA+TGG | - | chr4.4:7372123-7372142 | None:intergenic | 35.0% | |
| AAGAAGAATCCAGCATACAA+GGG | + | chr4.4:7373726-7373745 | MS.gene49757:CDS | 35.0% | |
| AAGACCAGACAAAAAACAGT+AGG | - | chr4.4:7374120-7374139 | None:intergenic | 35.0% | |
| AAGCATAAAAATCCGAAGAG+TGG | + | chr4.4:7373225-7373244 | MS.gene49757:CDS | 35.0% | |
| AATGCTAACAACTGCTTTCA+TGG | + | chr4.4:7372305-7372324 | MS.gene49757:intron | 35.0% | |
| ACTGTTTCCTTAGATTTGCA+TGG | + | chr4.4:7372702-7372721 | MS.gene49757:intron | 35.0% | |
| AGACCAGACAAAAAACAGTA+GGG | - | chr4.4:7374119-7374138 | None:intergenic | 35.0% | |
| AGCATAAAAATCCGAAGAGT+GGG | + | chr4.4:7373226-7373245 | MS.gene49757:CDS | 35.0% | |
| AGCATACATGTAATGTCATC+TGG | + | chr4.4:7374041-7374060 | MS.gene49757:intron | 35.0% | |
| AGGACCAAACATGATAGAAT+AGG | - | chr4.4:7373166-7373185 | None:intergenic | 35.0% | |
| CAAAAACATGAACCTAGAGA+AGG | - | chr4.4:7372760-7372779 | None:intergenic | 35.0% | |
| CTTCTACGAATCATTTGATG+AGG | + | chr4.4:7371335-7371354 | MS.gene49757:CDS | 35.0% | |
| GAAACAGAAGGAAGAAGAAA+AGG | + | chr4.4:7373995-7374014 | MS.gene49757:CDS | 35.0% | |
| GAAAGATGCAATTGTTTGTG+TGG | - | chr4.4:7374647-7374666 | None:intergenic | 35.0% | |
| GAATGAAGAAAACAAAGAGG+AGG | + | chr4.4:7375330-7375349 | MS.gene49757:CDS | 35.0% | |
| GATTCATCCTTAAGAATCAC+AGG | - | chr4.4:7373024-7373043 | None:intergenic | 35.0% | |
| GGACCAAACATGATAGAATA+GGG | - | chr4.4:7373165-7373184 | None:intergenic | 35.0% | |
| GGCAAATTTCTTATCTTCTG+AGG | + | chr4.4:7373377-7373396 | MS.gene49757:CDS | 35.0% | |
| GTTTCTTATCTTCAGGATCT+GGG | - | chr4.4:7373437-7373456 | None:intergenic | 35.0% | |
| TATGCTGGATTCTTCTTCAT+TGG | - | chr4.4:7373723-7373742 | None:intergenic | 35.0% | |
| TATTGAGATTTGGACAATGC+AGG | + | chr4.4:7373872-7373891 | MS.gene49757:CDS | 35.0% | |
| TCTCCCTATTCTATCATGTT+TGG | + | chr4.4:7373159-7373178 | MS.gene49757:CDS | 35.0% | |
| TGATCCGGTGATTAACATAT+AGG | - | chr4.4:7375234-7375253 | None:intergenic | 35.0% | |
| TGTCAAGACAATAACCACAA+CGG | - | chr4.4:7375128-7375147 | None:intergenic | 35.0% | |
| TTAACACGTCCCTTTATCAA+TGG | + | chr4.4:7372156-7372175 | MS.gene49757:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | - | chr4.4:7373780-7373799 | None:intergenic | 35.0% | |
| TTGCAGGATCTCATTGAAAA+GGG | + | chr4.4:7375064-7375083 | MS.gene49757:intron | 35.0% | |
| TTGTTAAACACGAAAGGAGT+CGG | - | chr4.4:7371842-7371861 | None:intergenic | 35.0% | |
| TTTGCAGGATCTCATTGAAA+AGG | + | chr4.4:7375063-7375082 | MS.gene49757:intron | 35.0% | |
| ! | AAGCTGGATTTTCAATTAGG+GGG | - | chr4.4:7373764-7373783 | None:intergenic | 35.0% |
| ! | AAGGTATCCATGCAAATCTA+AGG | - | chr4.4:7372712-7372731 | None:intergenic | 35.0% |
| ! | ATCCAGCTTATAAGGGTATA+TGG | + | chr4.4:7373775-7373794 | MS.gene49757:CDS | 35.0% |
| ! | CTCAACTCACTTTCTTCTTT+TGG | + | chr4.4:7371420-7371439 | MS.gene49757:intron | 35.0% |
| ! | GTATTTGTTGGACACATGAT+TGG | + | chr4.4:7371680-7371699 | MS.gene49757:intron | 35.0% |
| ! | GTTTTCCTTCGTATCGTATT+TGG | + | chr4.4:7375148-7375167 | MS.gene49757:CDS | 35.0% |
| ! | TCTAAAATATCTTCGACCAC+AGG | + | chr4.4:7373101-7373120 | MS.gene49757:CDS | 35.0% |
| !! | ATGAGGATTTTGATGATCGT+TGG | + | chr4.4:7371352-7371371 | MS.gene49757:CDS | 35.0% |
| !! | TGAATTCTGTGTTGATTTGC+AGG | + | chr4.4:7375048-7375067 | MS.gene49757:intron | 35.0% |
| !! | TGATTTGTTCTGTGCATTCT+AGG | + | chr4.4:7372901-7372920 | MS.gene49757:intron | 35.0% |
| !! | TTTCTGGTACTTTTGTGGAA+TGG | + | chr4.4:7372656-7372675 | MS.gene49757:intron | 35.0% |
| !!! | GTTGCAAATTTTGATTGACG+GGG | + | chr4.4:7373341-7373360 | MS.gene49757:CDS | 35.0% |
| AAAAGCAAATCTTCCTGCTG+TGG | + | chr4.4:7374281-7374300 | MS.gene49757:intron | 40.0% | |
| AAAATATCTTCGACCACAGG+AGG | + | chr4.4:7373104-7373123 | MS.gene49757:CDS | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | - | chr4.4:7374938-7374957 | None:intergenic | 40.0% | |
| AAGATAAGAAACCTGAGGAC+TGG | + | chr4.4:7373445-7373464 | MS.gene49757:CDS | 40.0% | |
| AAGATGAATTACCGCGTCAT+CGG | - | chr4.4:7371212-7371231 | None:intergenic | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | - | chr4.4:7374937-7374956 | None:intergenic | 40.0% | |
| AATGTGTTTCCTTAGGGAGT+TGG | + | chr4.4:7371963-7371982 | MS.gene49757:intron | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | - | chr4.4:7374503-7374522 | None:intergenic | 40.0% | |
| ACTATAACTGAAGGGAGATG+TGG | - | chr4.4:7372838-7372857 | None:intergenic | 40.0% | |
| AGATAAGAAACCTGAGGACT+GGG | + | chr4.4:7373446-7373465 | MS.gene49757:CDS | 40.0% | |
| AGCAAATACCTTCTTCTGCA+AGG | - | chr4.4:7374192-7374211 | None:intergenic | 40.0% | |
| AGCTCAAAGTAATCAGGGTT+TGG | - | chr4.4:7373816-7373835 | None:intergenic | 40.0% | |
| AGCTGCAATAGGCTCAAAAT+CGG | - | chr4.4:7373847-7373866 | None:intergenic | 40.0% | |
| AGGCTACAAAACCAGAAGAT+TGG | + | chr4.4:7373610-7373629 | MS.gene49757:CDS | 40.0% | |
| AGGGTAAAGCGAGATAATTG+AGG | + | chr4.4:7375376-7375395 | MS.gene49757:CDS | 40.0% | |
| ATCCAGCATACAAGGGAAAA+TGG | + | chr4.4:7373733-7373752 | MS.gene49757:CDS | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr4.4:7374642-7374661 | None:intergenic | 40.0% | |
| ATTCCTTAACCAACTCCCTA+AGG | - | chr4.4:7371975-7371994 | None:intergenic | 40.0% | |
| CTGGCACCAAAGAAAGATAA+AGG | - | chr4.4:7374608-7374627 | None:intergenic | 40.0% | |
| GAAAAGGACACTGAATCAAG+TGG | + | chr4.4:7374011-7374030 | MS.gene49757:CDS | 40.0% | |
| GAAGAAGAATCCAGCATACA+AGG | + | chr4.4:7373725-7373744 | MS.gene49757:CDS | 40.0% | |
| GAATGTTCAGACTTTAGGTG+AGG | + | chr4.4:7371900-7371919 | MS.gene49757:intron | 40.0% | |
| GACCAGACAAAAAACAGTAG+GGG | - | chr4.4:7374118-7374137 | None:intergenic | 40.0% | |
| GAGAGGAATGTTCAGACTTT+AGG | + | chr4.4:7371895-7371914 | MS.gene49757:intron | 40.0% | |
| GCAAATACCTTCTTCTGCAA+GGG | - | chr4.4:7374191-7374210 | None:intergenic | 40.0% | |
| GCATAAAAATCCGAAGAGTG+GGG | + | chr4.4:7373227-7373246 | MS.gene49757:CDS | 40.0% | |
| GGCTACAAAACCAGAAGATT+GGG | + | chr4.4:7373611-7373630 | MS.gene49757:CDS | 40.0% | |
| GGTTTCTTATCTTCAGGATC+TGG | - | chr4.4:7373438-7373457 | None:intergenic | 40.0% | |
| TACAGGGAGTTTCTACTTAC+TGG | - | chr4.4:7375187-7375206 | None:intergenic | 40.0% | |
| TCAATACCGATAGCTGCAAT+AGG | - | chr4.4:7373858-7373877 | None:intergenic | 40.0% | |
| TCATCATCTAACCATCCTTC+AGG | - | chr4.4:7373567-7373586 | None:intergenic | 40.0% | |
| TCCTCAGGTTTCTTATCTTC+AGG | - | chr4.4:7373444-7373463 | None:intergenic | 40.0% | |
| TCCTGAAGATAAGAAACCTG+AGG | + | chr4.4:7373440-7373459 | MS.gene49757:CDS | 40.0% | |
| TCCTTCGTATCGTATTTGGT+GGG | + | chr4.4:7375152-7375171 | MS.gene49757:CDS | 40.0% | |
| TGATGAGCCTGTGATTCTTA+AGG | + | chr4.4:7373014-7373033 | MS.gene49757:CDS | 40.0% | |
| TGTTAAACACGAAAGGAGTC+GGG | - | chr4.4:7371841-7371860 | None:intergenic | 40.0% | |
| TTCCTTCGTATCGTATTTGG+TGG | + | chr4.4:7375151-7375170 | MS.gene49757:CDS | 40.0% | |
| TTGGTTAGTGGAAGTTTCTG+CGG | - | chr4.4:7375299-7375318 | None:intergenic | 40.0% | |
| TTTGAGCCTATTGCAGCTAT+CGG | + | chr4.4:7373849-7373868 | MS.gene49757:CDS | 40.0% | |
| ! | AATGAAGTGCACCTTGTTTG+TGG | - | chr4.4:7373202-7373221 | None:intergenic | 40.0% |
| ! | AGCTGGATTTTCAATTAGGG+GGG | - | chr4.4:7373763-7373782 | None:intergenic | 40.0% |
| ! | ATAAGGGTATATGGAAGCCT+CGG | + | chr4.4:7373784-7373803 | MS.gene49757:CDS | 40.0% |
| ! | ATTTTCCCGTATCAGCGTAT+CGG | + | chr4.4:7374963-7374982 | MS.gene49757:intron | 40.0% |
| ! | CAGCTATCGGTATTGAGATT+TGG | + | chr4.4:7373862-7373881 | MS.gene49757:CDS | 40.0% |
| ! | TTTCCTTAGGGAGTTGGTTA+AGG | + | chr4.4:7371969-7371988 | MS.gene49757:intron | 40.0% |
| ! | TTTTAAGCTTGTAGGCACTC+AGG | - | chr4.4:7374244-7374263 | None:intergenic | 40.0% |
| ! | TTTTTGCTCGTTAGTTCCCT+TGG | + | chr4.4:7372774-7372793 | MS.gene49757:intron | 40.0% |
| !! | TGGAAGCATTCAAAGAGTGA+GGG | + | chr4.4:7372928-7372947 | MS.gene49757:CDS | 40.0% |
| !!! | AACAGAGTTGTTTTGGCTAC+AGG | - | chr4.4:7375204-7375223 | None:intergenic | 40.0% |
| !!! | ACAGAGTTGTTTTGGCTACA+GGG | - | chr4.4:7375203-7375222 | None:intergenic | 40.0% |
| AACAACTGCTTTCATGGCAC+TGG | + | chr4.4:7372311-7372330 | MS.gene49757:intron | 45.0% | |
| AAGCTGTGAAACCTGAAGGA+TGG | + | chr4.4:7373553-7373572 | MS.gene49757:CDS | 45.0% | |
| ACGATGAAGAGGATGGTGAA+TGG | + | chr4.4:7373634-7373653 | MS.gene49757:CDS | 45.0% | |
| ACTTCCACTAACCAAGACAG+TGG | + | chr4.4:7375304-7375323 | MS.gene49757:CDS | 45.0% | |
| AGAAGATTGGGACGATGAAG+AGG | + | chr4.4:7373623-7373642 | MS.gene49757:CDS | 45.0% | |
| AGCACTGCAAAAATTCCGAG+AGG | - | chr4.4:7371136-7371155 | None:intergenic | 45.0% | |
| AGTGAATCAAATGCCACAGC+AGG | - | chr4.4:7374297-7374316 | None:intergenic | 45.0% | |
| ATAAGATTGCCGCGTCATAC+CGG | + | chr4.4:7373934-7373953 | MS.gene49757:CDS | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | - | chr4.4:7374423-7374442 | None:intergenic | 45.0% | |
| ATGGTTAGATGATGAGCCTG+AGG | + | chr4.4:7373572-7373591 | MS.gene49757:CDS | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | + | chr4.4:7374822-7374841 | MS.gene49757:intron | 45.0% | |
| ATGTTTGGTCCTGACAAGTG+TGG | + | chr4.4:7373174-7373193 | MS.gene49757:CDS | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | - | chr4.4:7374637-7374656 | None:intergenic | 45.0% | |
| CAAAGAGGAGGAAACATCGA+AGG | + | chr4.4:7375342-7375361 | MS.gene49757:CDS | 45.0% | |
| CAATATGCACCCACTACCAA+GGG | - | chr4.4:7372793-7372812 | None:intergenic | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | - | chr4.4:7374502-7374521 | None:intergenic | 45.0% | |
| CATCAGGCTTTACTGCACTT+GGG | - | chr4.4:7373494-7373513 | None:intergenic | 45.0% | |
| CGATGAAGAGGATGGTGAAT+GGG | + | chr4.4:7373635-7373654 | MS.gene49757:CDS | 45.0% | |
| CTTCATTCTCTCCACTGTCT+TGG | - | chr4.4:7375318-7375337 | None:intergenic | 45.0% | |
| GAACGAAAGCGAATTCCTCT+CGG | + | chr4.4:7371118-7371137 | MS.gene49757:CDS | 45.0% | |
| GAAGAAGCTGTGAAACCTGA+AGG | + | chr4.4:7373549-7373568 | MS.gene49757:CDS | 45.0% | |
| GAGATTTGGACAATGCAGGA+TGG | + | chr4.4:7373876-7373895 | MS.gene49757:CDS | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | - | chr4.4:7374424-7374443 | None:intergenic | 45.0% | |
| GATACTTCCCGATACGTATC+CGG | + | chr4.4:7374413-7374432 | MS.gene49757:intron | 45.0% | |
| GATTGTCTTGGGAGGGATAA+GGG | - | chr4.4:7373415-7373434 | None:intergenic | 45.0% | |
| GCTGCAATAGGCTCAAAATC+GGG | - | chr4.4:7373846-7373865 | None:intergenic | 45.0% | |
| GTCTGATACCAAGACTTCGA+CGG | - | chr4.4:7374732-7374751 | None:intergenic | 45.0% | |
| GTCTTGGTATCAGACGACTT+TGG | + | chr4.4:7374737-7374756 | MS.gene49757:intron | 45.0% | |
| TCAACATACTCCCCACTCTT+CGG | - | chr4.4:7373240-7373259 | None:intergenic | 45.0% | |
| TCATCAGGCTTTACTGCACT+TGG | - | chr4.4:7373495-7373514 | None:intergenic | 45.0% | |
| TCCCACCAAATACGATACGA+AGG | - | chr4.4:7375156-7375175 | None:intergenic | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | + | chr4.4:7374998-7375017 | MS.gene49757:intron | 45.0% | |
| TCTTCATCGTCCCAATCTTC+TGG | - | chr4.4:7373624-7373643 | None:intergenic | 45.0% | |
| TGACGGGGAACAGAAGAAAA+AGG | + | chr4.4:7373356-7373375 | MS.gene49757:CDS | 45.0% | |
| TGCAGTAAAGCCTGATGACT+GGG | + | chr4.4:7373497-7373516 | MS.gene49757:CDS | 45.0% | |
| TGTTTGGTCCTGACAAGTGT+GGG | + | chr4.4:7373175-7373194 | MS.gene49757:CDS | 45.0% | |
| TTCTGTGCATTCTAGGCATC+TGG | + | chr4.4:7372908-7372927 | MS.gene49757:intron | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | - | chr4.4:7374636-7374655 | None:intergenic | 45.0% | |
| ! | ACGTGAGATAGCTTGTCAGA+GGG | - | chr4.4:7373291-7373310 | None:intergenic | 45.0% |
| ! | AGTGAGGGGCATGAAGATTA+TGG | + | chr4.4:7372943-7372962 | MS.gene49757:CDS | 45.0% |
| ! | CATCATCGGAAGCATGAAGA+AGG | - | chr4.4:7371189-7371208 | None:intergenic | 45.0% |
| ! | CTTTTTGCCCTTGCAGAAGA+AGG | + | chr4.4:7374181-7374200 | MS.gene49757:intron | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | - | chr4.4:7374414-7374433 | None:intergenic | 45.0% |
| ! | GTGAGGGGCATGAAGATTAT+GGG | + | chr4.4:7372944-7372963 | MS.gene49757:CDS | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+GGG | + | chr4.4:7373785-7373804 | MS.gene49757:CDS | 45.0% |
| ! | TCAGGATCTGGGATTGTCTT+GGG | - | chr4.4:7373426-7373445 | None:intergenic | 45.0% |
| ! | TCGTTAGTTCCCTTGGTAGT+GGG | + | chr4.4:7372781-7372800 | MS.gene49757:intron | 45.0% |
| ! | TTCAGGATCTGGGATTGTCT+TGG | - | chr4.4:7373427-7373446 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | + | chr4.4:7373057-7373076 | MS.gene49757:CDS | 45.0% |
| ! | TTTTCCACTCACCACAACCA+GGG | - | chr4.4:7373698-7373717 | None:intergenic | 45.0% |
| !! | CTGGAAGCATTCAAAGAGTG+AGG | + | chr4.4:7372927-7372946 | MS.gene49757:CDS | 45.0% |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr4.4:7374413-7374432 | None:intergenic | 45.0% |
| !! | GGAAGCATTCAAAGAGTGAG+GGG | + | chr4.4:7372929-7372948 | MS.gene49757:CDS | 45.0% |
| !!! | CTCCCCTACTGTTTTTTGTC+TGG | + | chr4.4:7374113-7374132 | MS.gene49757:intron | 45.0% |
| !!! | CTTCTGGTTTTGTAGCCTCT+GGG | - | chr4.4:7373608-7373627 | None:intergenic | 45.0% |
| !!! | TCTTCTGGTTTTGTAGCCTC+TGG | - | chr4.4:7373609-7373628 | None:intergenic | 45.0% |
| !!! | TGCCATTTTCCCTTGTATGC+TGG | - | chr4.4:7373738-7373757 | None:intergenic | 45.0% |
| !!! | TGTTTTTTTTTTTTATAAAT+AGG | - | chr4.4:7372014-7372033 | None:intergenic | 5.0% |
| AAACATCGAAGGCTCCACGT+CGG | + | chr4.4:7375353-7375372 | MS.gene49757:CDS | 50.0% | |
| AAAGCCTGATGACTGGGATG+AGG | + | chr4.4:7373503-7373522 | MS.gene49757:CDS | 50.0% | |
| AAGCTTGTAGGCACTCAGGA+AGG | - | chr4.4:7374240-7374259 | None:intergenic | 50.0% | |
| AGCTTGTAGGCACTCAGGAA+GGG | - | chr4.4:7374239-7374258 | None:intergenic | 50.0% | |
| AGCTTGTCAGAGGGAACAGA+TGG | - | chr4.4:7373282-7373301 | None:intergenic | 50.0% | |
| AGCTTTGCATGGCCTTCTCT+AGG | + | chr4.4:7372745-7372764 | MS.gene49757:intron | 50.0% | |
| AGGCTTTACTGCACTTGGGT+CGG | - | chr4.4:7373490-7373509 | None:intergenic | 50.0% | |
| CACATTCGAGGCCATTCTGA+AGG | - | chr4.4:7373071-7373090 | None:intergenic | 50.0% | |
| CAGATGGGGGAAACTTGAGA+TGG | - | chr4.4:7373266-7373285 | None:intergenic | 50.0% | |
| CAGGGGCTGCTTCACAATTT+GGG | - | chr4.4:7373680-7373699 | None:intergenic | 50.0% | |
| CCAATATGCACCCACTACCA+AGG | - | chr4.4:7372794-7372813 | None:intergenic | 50.0% | |
| CCCGGATACGAGATACGATA+CGG | - | chr4.4:7375002-7375021 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | + | chr4.4:7374999-7375018 | MS.gene49757:intron | 50.0% | |
| CCTGCACAAGAGACATGATC+CGG | - | chr4.4:7375249-7375268 | None:intergenic | 50.0% | |
| CTCGTTAGTTCCCTTGGTAG+TGG | + | chr4.4:7372780-7372799 | MS.gene49757:intron | 50.0% | |
| CTCTCCACTGTCTTGGTTAG+TGG | - | chr4.4:7375311-7375330 | None:intergenic | 50.0% | |
| CTGGTTGTGGTGAGTGGAAA+AGG | + | chr4.4:7373697-7373716 | MS.gene49757:CDS | 50.0% | |
| CTTCAGAATGGCCTCGAATG+TGG | + | chr4.4:7373069-7373088 | MS.gene49757:CDS | 50.0% | |
| CTTGTCAGAGGGAACAGATG+GGG | - | chr4.4:7373280-7373299 | None:intergenic | 50.0% | |
| GATATGCACCACCACATTCG+AGG | - | chr4.4:7373083-7373102 | None:intergenic | 50.0% | |
| GATTGGGACGATGAAGAGGA+TGG | + | chr4.4:7373627-7373646 | MS.gene49757:CDS | 50.0% | |
| GCTTGTCAGAGGGAACAGAT+GGG | - | chr4.4:7373281-7373300 | None:intergenic | 50.0% | |
| GGATTGTCTTGGGAGGGATA+AGG | - | chr4.4:7373416-7373435 | None:intergenic | 50.0% | |
| GTGCAGTAAAGCCTGATGAC+TGG | + | chr4.4:7373496-7373515 | MS.gene49757:CDS | 50.0% | |
| GTTAGTGGAAGTTTCTGCGG+CGG | - | chr4.4:7375296-7375315 | None:intergenic | 50.0% | |
| GTTTGGTCCTGACAAGTGTG+GGG | + | chr4.4:7373176-7373195 | MS.gene49757:CDS | 50.0% | |
| TAAGATTGCCGCGTCATACC+GGG | + | chr4.4:7373935-7373954 | MS.gene49757:CDS | 50.0% | |
| TCTGGGTCATCTATCTCCTC+AGG | - | chr4.4:7373591-7373610 | None:intergenic | 50.0% | |
| TGAGGAGATAGATGACCCAG+AGG | + | chr4.4:7373590-7373609 | MS.gene49757:CDS | 50.0% | |
| TGATACCAAGACTTCGACGG+TGG | - | chr4.4:7374729-7374748 | None:intergenic | 50.0% | |
| TTAGTGGAAGTTTCTGCGGC+GGG | - | chr4.4:7375295-7375314 | None:intergenic | 50.0% | |
| TTGTCAGAGGGAACAGATGG+GGG | - | chr4.4:7373279-7373298 | None:intergenic | 50.0% | |
| TTTCCACTCACCACAACCAG+GGG | - | chr4.4:7373697-7373716 | None:intergenic | 50.0% | |
| TTTGTCCACCGTCGAAGTCT+TGG | + | chr4.4:7374721-7374740 | MS.gene49757:intron | 50.0% | |
| ! | ACTGCACCGATACGCTGATA+CGG | - | chr4.4:7374972-7374991 | None:intergenic | 50.0% |
| ! | CACGTGAGATAGCTTGTCAG+AGG | - | chr4.4:7373292-7373311 | None:intergenic | 50.0% |
| ! | CGGGACGTATCGGAAAGTAT+CGG | - | chr4.4:7374483-7374502 | None:intergenic | 50.0% |
| ! | CTTTTCCACTCACCACAACC+AGG | - | chr4.4:7373699-7373718 | None:intergenic | 50.0% |
| ! | GATCTGGGATTGTCTTGGGA+GGG | - | chr4.4:7373422-7373441 | None:intergenic | 50.0% |
| ! | TCAGGGTTTGGAATATCCCG+AGG | - | chr4.4:7373804-7373823 | None:intergenic | 50.0% |
| !! | CCTTGGTAGTGGGTGCATAT+TGG | + | chr4.4:7372791-7372810 | MS.gene49757:intron | 50.0% |
| AAAGTGGACGGCGACCACTT+TGG | - | chr4.4:7374704-7374723 | None:intergenic | 55.0% | |
| CAAGTGTGGGGCCACAAACA+AGG | + | chr4.4:7373188-7373207 | MS.gene49757:CDS | 55.0% | |
| CAGAATGGCCTCGAATGTGG+TGG | + | chr4.4:7373072-7373091 | MS.gene49757:CDS | 55.0% | |
| CCAAATTGTGAAGCAGCCCC+TGG | + | chr4.4:7373678-7373697 | MS.gene49757:CDS | 55.0% | |
| CCAGGGGCTGCTTCACAATT+TGG | - | chr4.4:7373681-7373700 | None:intergenic | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | + | chr4.4:7374490-7374509 | MS.gene49757:intron | 55.0% | |
| CCGGATCATGTCTCTTGTGC+AGG | + | chr4.4:7375246-7375265 | MS.gene49757:intron | 55.0% | |
| CCGTGTGTATCGGGACGTAT+CGG | - | chr4.4:7374493-7374512 | None:intergenic | 55.0% | |
| CGTCATACCGGGAGACTACA+TGG | + | chr4.4:7373946-7373965 | MS.gene49757:CDS | 55.0% | |
| GACTTCGACGGTGGACAAAG+TGG | - | chr4.4:7374720-7374739 | None:intergenic | 55.0% | |
| GCATCCTCATCCCAGTCATC+AGG | - | chr4.4:7373510-7373529 | None:intergenic | 55.0% | |
| GCCACAAAGTCTGTGAAGCC+CGG | - | chr4.4:7375020-7375039 | None:intergenic | 55.0% | |
| GGCTTTACTGCACTTGGGTC+GGG | - | chr4.4:7373489-7373508 | None:intergenic | 55.0% | |
| GTCTCTTGTGCAGGCAAGAG+TGG | + | chr4.4:7375255-7375274 | MS.gene49757:intron | 55.0% | |
| GTCTTGGGAGGGATAAGGGA+AGG | - | chr4.4:7373411-7373430 | None:intergenic | 55.0% | |
| TACCGCGTCATCGGCATCAT+CGG | - | chr4.4:7371203-7371222 | None:intergenic | 55.0% | |
| TATCGGTGCAGGATACGCAG+GGG | - | chr4.4:7374386-7374405 | None:intergenic | 55.0% | |
| TATCTTCGACCACAGGAGGC+TGG | + | chr4.4:7373108-7373127 | MS.gene49757:CDS | 55.0% | |
| TCCGGGCTTCACAGACTTTG+TGG | + | chr4.4:7375016-7375035 | MS.gene49757:intron | 55.0% | |
| TCGACGGTGGACAAAGTGGA+CGG | - | chr4.4:7374716-7374735 | None:intergenic | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | - | chr4.4:7374380-7374399 | None:intergenic | 55.0% | |
| TGGGCTTCCATGTAGTCTCC+CGG | - | chr4.4:7373956-7373975 | None:intergenic | 55.0% | |
| TGTAGTCTCCCGGTATGACG+CGG | - | chr4.4:7373946-7373965 | None:intergenic | 55.0% | |
| TTCCGATGATGCCGATGACG+CGG | + | chr4.4:7371198-7371217 | MS.gene49757:CDS | 55.0% | |
| TTTGTGGCCCCACACTTGTC+AGG | - | chr4.4:7373186-7373205 | None:intergenic | 55.0% | |
| ! | CTGCACCGATACGCTGATAC+GGG | - | chr4.4:7374971-7374990 | None:intergenic | 55.0% |
| ! | GGATCTGGGATTGTCTTGGG+AGG | - | chr4.4:7373423-7373442 | None:intergenic | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr4.4:7374387-7374406 | None:intergenic | 55.0% |
| !! | GGGAAGTATCGGGCAGGTAT+CGG | - | chr4.4:7374403-7374422 | None:intergenic | 55.0% |
| ATCGAAGGCTCCACGTCGGA+GGG | + | chr4.4:7375357-7375376 | MS.gene49757:CDS | 60.0% | |
| CTGGGATGAGGATGCACCCT+TGG | + | chr4.4:7373515-7373534 | MS.gene49757:CDS | 60.0% | |
| GGTTTCCAACCAGCCTCCTG+TGG | - | chr4.4:7373120-7373139 | None:intergenic | 60.0% | |
| TCTCGCTTTACCCTCCGACG+TGG | - | chr4.4:7375370-7375389 | None:intergenic | 60.0% | |
| TCTCTCTCGTCCCAGTCCTC+AGG | - | chr4.4:7373459-7373478 | None:intergenic | 60.0% | |
| TGGTGTGGTGTGGGTCGTAC+TGG | - | chr4.4:7374627-7374646 | None:intergenic | 60.0% | |
| TGTGAAGCAGCCCCTGGTTG+TGG | + | chr4.4:7373684-7373703 | MS.gene49757:CDS | 60.0% | |
| TTCGACCACAGGAGGCTGGT+TGG | + | chr4.4:7373112-7373131 | MS.gene49757:CDS | 60.0% | |
| ! | GGAGGCTGGTTGGAAACCCA+AGG | + | chr4.4:7373122-7373141 | MS.gene49757:CDS | 60.0% |
| !! | CGTATCGGGAAGTATCGGGC+AGG | - | chr4.4:7374409-7374428 | None:intergenic | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr4.4:7374388-7374407 | None:intergenic | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | chr4.4:7374397-7374416 | None:intergenic | 60.0% |
| CAGCCCCTGGTTGTGGTGAG+TGG | + | chr4.4:7373691-7373710 | MS.gene49757:CDS | 65.0% | |
| CATCGAAGGCTCCACGTCGG+AGG | + | chr4.4:7375356-7375375 | MS.gene49757:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7371112 | 7375396 | 7371112 | ID=MS.gene49757 |
| chr4.4 | mRNA | 7371112 | 7375396 | 7371112 | ID=MS.gene49757.t1;Parent=MS.gene49757 |
| chr4.4 | exon | 7371112 | 7371219 | 7371112 | ID=MS.gene49757.t1.exon1;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7371112 | 7371219 | 7371112 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| chr4.4 | exon | 7371333 | 7371402 | 7371333 | ID=MS.gene49757.t1.exon2;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7371333 | 7371402 | 7371333 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| chr4.4 | exon | 7372923 | 7374049 | 7372923 | ID=MS.gene49757.t1.exon3;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7372923 | 7374049 | 7372923 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| chr4.4 | exon | 7374197 | 7374268 | 7374197 | ID=MS.gene49757.t1.exon4;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7374197 | 7374268 | 7374197 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| chr4.4 | exon | 7375070 | 7375186 | 7375070 | ID=MS.gene49757.t1.exon5;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7375070 | 7375186 | 7375070 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| chr4.4 | exon | 7375268 | 7375396 | 7375268 | ID=MS.gene49757.t1.exon6;Parent=MS.gene49757.t1 |
| chr4.4 | CDS | 7375268 | 7375396 | 7375268 | ID=cds.MS.gene49757.t1;Parent=MS.gene49757.t1 |
| Gene Sequence |
| Protein sequence |
