Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50710.t1 | RHN60672.1 | 96.7 | 306 | 10 | 0 | 21 | 326 | 19 | 324 | 6.00E-171 | 610.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50710.t1 | Q9M2R0 | 55.0 | 311 | 130 | 7 | 21 | 326 | 11 | 316 | 2.1e-92 | 341.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50710.t1 | A0A396I4X7 | 96.7 | 306 | 10 | 0 | 21 | 326 | 19 | 324 | 4.3e-171 | 610.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058881 | MS.gene50710 | 0.82239 | 2.43E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50710.t1 | MTR_4g071870 | 96.273 | 322 | 12 | 0 | 5 | 326 | 3 | 324 | 0.0 | 653 |
| MS.gene50710.t1 | MTR_4g057675 | 96.273 | 322 | 12 | 0 | 5 | 326 | 3 | 324 | 0.0 | 652 |
| MS.gene50710.t1 | MTR_4g066150 | 54.890 | 317 | 134 | 6 | 17 | 329 | 8 | 319 | 1.95e-112 | 353 |
| MS.gene50710.t1 | MTR_7g092770 | 56.550 | 313 | 125 | 8 | 12 | 319 | 2 | 308 | 1.08e-109 | 346 |
| MS.gene50710.t1 | MTR_0305s0020 | 56.250 | 320 | 130 | 8 | 12 | 326 | 2 | 316 | 7.64e-107 | 338 |
| MS.gene50710.t1 | MTR_3g027150 | 46.106 | 321 | 154 | 6 | 15 | 319 | 32 | 349 | 3.89e-91 | 298 |
| MS.gene50710.t1 | MTR_4g023460 | 51.027 | 292 | 131 | 6 | 35 | 319 | 388 | 674 | 1.92e-87 | 293 |
| MS.gene50710.t1 | MTR_0291s0010 | 40.561 | 392 | 191 | 10 | 17 | 387 | 13 | 383 | 2.14e-87 | 288 |
| MS.gene50710.t1 | MTR_5g010390 | 47.205 | 322 | 154 | 7 | 15 | 324 | 232 | 549 | 3.08e-86 | 288 |
| MS.gene50710.t1 | MTR_4g033215 | 44.620 | 316 | 167 | 5 | 14 | 323 | 272 | 585 | 1.12e-85 | 287 |
| MS.gene50710.t1 | MTR_8g031270 | 43.896 | 385 | 180 | 14 | 18 | 387 | 233 | 596 | 5.67e-84 | 282 |
| MS.gene50710.t1 | MTR_7g076900 | 44.969 | 318 | 150 | 7 | 18 | 319 | 235 | 543 | 4.41e-83 | 280 |
| MS.gene50710.t1 | MTR_1g015540 | 43.408 | 311 | 156 | 8 | 22 | 324 | 9 | 307 | 9.23e-64 | 223 |
| MS.gene50710.t1 | MTR_6g028050 | 39.384 | 292 | 150 | 10 | 42 | 322 | 285 | 560 | 6.34e-53 | 195 |
| MS.gene50710.t1 | MTR_4g107850 | 40.604 | 298 | 137 | 11 | 43 | 318 | 303 | 582 | 3.13e-52 | 193 |
| MS.gene50710.t1 | MTR_5g096980 | 38.538 | 301 | 160 | 10 | 16 | 302 | 5 | 294 | 2.07e-51 | 189 |
| MS.gene50710.t1 | MTR_6g027540 | 37.705 | 305 | 149 | 10 | 41 | 322 | 272 | 558 | 1.63e-49 | 185 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50710.t1 | AT3G57880 | 55.000 | 320 | 134 | 7 | 12 | 326 | 2 | 316 | 3.50e-111 | 350 |
| MS.gene50710.t1 | AT3G57880 | 55.000 | 320 | 134 | 7 | 12 | 326 | 2 | 316 | 3.50e-111 | 350 |
| MS.gene50710.t1 | AT3G57880 | 55.000 | 320 | 134 | 7 | 12 | 326 | 2 | 316 | 3.50e-111 | 350 |
| MS.gene50710.t1 | AT3G57880 | 55.000 | 320 | 134 | 7 | 12 | 326 | 2 | 316 | 3.50e-111 | 350 |
| MS.gene50710.t1 | AT1G51570 | 55.172 | 319 | 133 | 8 | 12 | 325 | 2 | 315 | 7.48e-110 | 346 |
| MS.gene50710.t1 | AT5G12970 | 55.312 | 320 | 134 | 6 | 15 | 330 | 6 | 320 | 1.88e-107 | 340 |
| MS.gene50710.t1 | AT4G20080 | 52.215 | 316 | 132 | 9 | 19 | 326 | 15 | 319 | 4.34e-93 | 302 |
| MS.gene50710.t1 | AT5G06850 | 42.564 | 390 | 192 | 10 | 14 | 387 | 8 | 381 | 1.45e-91 | 298 |
| MS.gene50710.t1 | AT5G48060 | 41.007 | 417 | 211 | 12 | 4 | 406 | 245 | 640 | 5.65e-89 | 296 |
| MS.gene50710.t1 | AT4G11610 | 47.962 | 319 | 149 | 8 | 15 | 320 | 100 | 414 | 6.26e-87 | 288 |
| MS.gene50710.t1 | AT4G11610 | 47.962 | 319 | 149 | 8 | 15 | 320 | 233 | 547 | 3.36e-86 | 288 |
| MS.gene50710.t1 | AT4G11610 | 47.962 | 319 | 149 | 8 | 15 | 320 | 237 | 551 | 4.96e-86 | 288 |
| MS.gene50710.t1 | AT1G22610 | 45.820 | 323 | 158 | 8 | 10 | 319 | 248 | 566 | 3.25e-83 | 280 |
| MS.gene50710.t1 | AT1G04150 | 40.609 | 394 | 178 | 13 | 18 | 387 | 241 | 602 | 7.86e-74 | 254 |
| MS.gene50710.t1 | AT5G44760 | 42.675 | 314 | 135 | 9 | 16 | 319 | 3 | 281 | 1.87e-72 | 240 |
| MS.gene50710.t1 | AT4G00700 | 37.164 | 409 | 212 | 13 | 18 | 406 | 229 | 612 | 5.64e-71 | 246 |
| MS.gene50710.t1 | AT4G00700 | 37.164 | 409 | 212 | 13 | 18 | 406 | 229 | 612 | 5.64e-71 | 246 |
| MS.gene50710.t1 | AT3G61300 | 43.974 | 307 | 149 | 10 | 18 | 318 | 221 | 510 | 6.95e-69 | 240 |
| MS.gene50710.t1 | AT5G17980 | 40.690 | 290 | 148 | 9 | 42 | 322 | 315 | 589 | 3.11e-55 | 202 |
| MS.gene50710.t1 | AT1G74720 | 38.699 | 292 | 150 | 8 | 43 | 317 | 328 | 607 | 2.28e-51 | 190 |
| MS.gene50710.t1 | AT3G03680 | 39.203 | 301 | 139 | 11 | 43 | 317 | 274 | 556 | 6.24e-51 | 189 |
| MS.gene50710.t1 | AT3G61720 | 34.259 | 324 | 180 | 13 | 16 | 324 | 5 | 310 | 1.30e-46 | 175 |
| MS.gene50710.t1 | AT5G03435 | 36.029 | 272 | 148 | 10 | 16 | 278 | 5 | 259 | 1.32e-42 | 161 |
| MS.gene50710.t1 | AT5G03435 | 36.029 | 272 | 148 | 10 | 16 | 278 | 5 | 259 | 6.04e-41 | 158 |
Find 126 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAACAAGCATGAAAATT+TGG | 0.096664 | 4.3:+33853581 | MS.gene50710:CDS |
| GTATCAGACTTACCGGTTTC+TGG | 0.164092 | 4.3:-33852916 | None:intergenic |
| TTCCTTATTGGTTGTCTCTA+TGG | 0.180333 | 4.3:-33857060 | None:intergenic |
| AACTATCCTTTGATTAGTTT+GGG | 0.217519 | 4.3:-33858594 | None:intergenic |
| AAACTATCCTTTGATTAGTT+TGG | 0.231148 | 4.3:-33858595 | None:intergenic |
| TCAACAAGATCAAATGTTAT+TGG | 0.250507 | 4.3:-33852847 | None:intergenic |
| GAGGATTCAAGAACAAGTTT+TGG | 0.257992 | 4.3:+33853047 | MS.gene50710:CDS |
| TGCTCATTTCTTCTTTCTCT+TGG | 0.262969 | 4.3:-33857910 | None:intergenic |
| TCCTCATTCCATACAGGGTT+TGG | 0.278298 | 4.3:-33853489 | None:intergenic |
| ATCTTTATCCAAGGTGTTCT+AGG | 0.281231 | 4.3:+33853429 | MS.gene50710:CDS |
| ACCGGTTTCTGGTAAGTCTT+TGG | 0.293857 | 4.3:-33852905 | None:intergenic |
| TGCCTTTGAGCAACAAATCT+TGG | 0.298907 | 4.3:-33853398 | None:intergenic |
| TCCATCTACCAGCTCCAAAT+TGG | 0.300237 | 4.3:-33855756 | None:intergenic |
| TCTTTCTCTTGGTCATTCTC+TGG | 0.317966 | 4.3:-33857899 | None:intergenic |
| CAAAACTCTATCTTCTCTTT+TGG | 0.321800 | 4.3:-33858544 | None:intergenic |
| GATCATTGCTCGTGGTAAAA+AGG | 0.325907 | 4.3:+33855798 | MS.gene50710:CDS |
| GTTGGTATGATAAACCAATT+TGG | 0.326091 | 4.3:+33855742 | MS.gene50710:CDS |
| GCTTGATCAAGGAGAGTTAA+TGG | 0.338185 | 4.3:+33853221 | MS.gene50710:CDS |
| ACCAATTTGGAGCTGGTAGA+TGG | 0.340144 | 4.3:+33855755 | MS.gene50710:CDS |
| GCTACTCGGCCAATGACATT+AGG | 0.343095 | 4.3:-33853108 | None:intergenic |
| CCACATGAGCGAGAAAAGTT+TGG | 0.348947 | 4.3:+33855915 | MS.gene50710:CDS |
| TCCAACAAGCATGAAAATTT+GGG | 0.351312 | 4.3:+33853582 | MS.gene50710:CDS |
| GCCTTTGAGCAACAAATCTT+GGG | 0.362604 | 4.3:-33853397 | None:intergenic |
| CCAAGTTTCACTTCCACAAA+AGG | 0.364061 | 4.3:-33852946 | None:intergenic |
| TCTTTACCTTCAAGTTCTTT+AGG | 0.364860 | 4.3:-33853687 | None:intergenic |
| GTTGCAAGTATCAGACTTAC+CGG | 0.374288 | 4.3:-33852923 | None:intergenic |
| ACTCTTCCAGCATTGATGTT+TGG | 0.375557 | 4.3:-33852805 | None:intergenic |
| TAAGCTTGAGGGTCAAAATA+TGG | 0.377764 | 4.3:+33853194 | MS.gene50710:CDS |
| GCATCTGAATGCCAAGCATC+AGG | 0.388546 | 4.3:-33853282 | None:intergenic |
| AGTGGTTGACCCTTGATGTT+TGG | 0.395213 | 4.3:-33855961 | None:intergenic |
| AGCCATAGAGACAACCAATA+AGG | 0.396326 | 4.3:+33857058 | MS.gene50710:CDS |
| ATGGCTTCCATGAAGCTTTG+AGG | 0.406974 | 4.3:-33857041 | None:intergenic |
| GCTACCCACAGCTGAAGAAT+AGG | 0.411440 | 4.3:-33857939 | None:intergenic |
| GTGAAACTTGGAAGTTTCCT+AGG | 0.422610 | 4.3:+33852958 | MS.gene50710:CDS |
| TGTATATTTCTCCTAGACTT+TGG | 0.428578 | 4.3:+33853349 | MS.gene50710:CDS |
| GAGAGTTAATGGTGTCGGTT+TGG | 0.428942 | 4.3:+33853232 | MS.gene50710:CDS |
| AGGCTCTCTGTATGTTATGC+AGG | 0.433753 | 4.3:+33855822 | MS.gene50710:CDS |
| CTATCGGGAGGAACCCTCAT+AGG | 0.433999 | 4.3:-33853150 | None:intergenic |
| CTACTCGGCCAATGACATTA+GGG | 0.434739 | 4.3:-33853107 | None:intergenic |
| CAATTTCTGATATTCCTATG+AGG | 0.442502 | 4.3:+33853136 | MS.gene50710:CDS |
| ATCAAATCCTCATTCCATAC+AGG | 0.445962 | 4.3:-33853495 | None:intergenic |
| GTTAATGGTGTCGGTTTGGA+TGG | 0.448872 | 4.3:+33853236 | MS.gene50710:CDS |
| CTGTCTGATCTTCTCAATTG+AGG | 0.448874 | 4.3:-33856954 | None:intergenic |
| CAAAAGCCTAAAGAACTTGA+AGG | 0.450247 | 4.3:+33853681 | MS.gene50710:CDS |
| AGATTAATCCAAACCCTGTA+TGG | 0.452058 | 4.3:+33853481 | MS.gene50710:CDS |
| CATATCTGCTCCATTGTCAT+TGG | 0.455158 | 4.3:-33858506 | None:intergenic |
| TTGGTTCCACTCAGGGTTTG+AGG | 0.472048 | 4.3:-33853004 | None:intergenic |
| CCTGTGCATGTTCCGCTACC+TGG | 0.472224 | 4.3:+33857848 | MS.gene50710:CDS |
| GCCAAAGACTTACCAGAAAC+CGG | 0.473777 | 4.3:+33852904 | MS.gene50710:CDS |
| GAAGAGTGATAAGTGGTGAT+AGG | 0.476753 | 4.3:+33852821 | MS.gene50710:CDS |
| CAACTCCAACAGCTAGTGTT+TGG | 0.478607 | 4.3:+33853649 | MS.gene50710:CDS |
| CTACCCACAGCTGAAGAATA+GGG | 0.479660 | 4.3:-33857938 | None:intergenic |
| AGGAGAACCTCAAAGCTTCA+TGG | 0.481569 | 4.3:+33857034 | MS.gene50710:CDS |
| ATCCTTTGATTAGTTTGGGG+TGG | 0.486951 | 4.3:-33858590 | None:intergenic |
| CAAGTTTCACTTCCACAAAA+GGG | 0.488240 | 4.3:-33852945 | None:intergenic |
| TTATACCATTGTGGTGCTAA+AGG | 0.491577 | 4.3:-33853174 | None:intergenic |
| GCTGATCACCCTAATGTCAT+TGG | 0.499723 | 4.3:+33853099 | MS.gene50710:CDS |
| TGCAGACCATGGCGTACATA+AGG | 0.500035 | 4.3:-33857961 | None:intergenic |
| TTGTGGTGCTAAAGGACTAT+CGG | 0.500875 | 4.3:-33853166 | None:intergenic |
| AATTTCTGATATTCCTATGA+GGG | 0.503343 | 4.3:+33853137 | MS.gene50710:CDS |
| CAGAAATTGTGAATGCTACT+CGG | 0.504385 | 4.3:-33853122 | None:intergenic |
| TGGTAGATGGAAGCTCAGTA+AGG | 0.505357 | 4.3:+33855768 | MS.gene50710:CDS |
| ACATTAGGGTGATCAGCAAC+GGG | 0.506452 | 4.3:-33853093 | None:intergenic |
| ATGAAAGTTTCCCTGATGCT+TGG | 0.507959 | 4.3:+33853271 | MS.gene50710:CDS |
| GGGTTTGGATTAATCTTCAT+CGG | 0.509237 | 4.3:-33853474 | None:intergenic |
| TGTGGTGCTAAAGGACTATC+GGG | 0.510853 | 4.3:-33853165 | None:intergenic |
| GAATCATCTTCCAAACATCA+AGG | 0.513638 | 4.3:+33855951 | MS.gene50710:CDS |
| TTGAGCATTGAACAGGGGCA+AGG | 0.525448 | 4.3:+33853555 | MS.gene50710:CDS |
| GGTGCCCTATTCTTCAGCTG+TGG | 0.526340 | 4.3:+33857934 | MS.gene50710:CDS |
| TCTTTATCCAAGGTGTTCTA+GGG | 0.527564 | 4.3:+33853430 | MS.gene50710:CDS |
| CCACAATGGTATAAGCTTGA+GGG | 0.529897 | 4.3:+33853183 | MS.gene50710:CDS |
| TTGTAAAGAAGCTGCAGGCT+TGG | 0.530111 | 4.3:+33858564 | MS.gene50710:CDS |
| CAAAGGCCTTTGTTGTCCCT+AGG | 0.534414 | 4.3:-33852975 | None:intergenic |
| GCCCAAGATTTGTTGCTCAA+AGG | 0.535385 | 4.3:+33853396 | MS.gene50710:CDS |
| TGAGCATTGAACAGGGGCAA+GGG | 0.538995 | 4.3:+33853556 | MS.gene50710:CDS |
| ACAACACCAAACATCAATGC+TGG | 0.539673 | 4.3:+33852799 | MS.gene50710:CDS |
| ATCTCAAGAAAGTTCTTGAA+AGG | 0.540106 | 4.3:+33857804 | MS.gene50710:CDS |
| GACATTAGGGTGATCAGCAA+CGG | 0.540900 | 4.3:-33853094 | None:intergenic |
| TATGTAAACTTCACTGAGGA+AGG | 0.541446 | 4.3:+33857014 | MS.gene50710:CDS |
| CCTACAGCATAACCGATGTC+TGG | 0.542961 | 4.3:-33857989 | None:intergenic |
| TCCAAACCCTGTATGGAATG+AGG | 0.545885 | 4.3:+33853488 | MS.gene50710:CDS |
| AATATGGTGAAGCTTGATCA+AGG | 0.547460 | 4.3:+33853210 | MS.gene50710:CDS |
| ACTCTAAGATACCAAAGTCT+AGG | 0.549349 | 4.3:-33853360 | None:intergenic |
| GTGCCCTATTCTTCAGCTGT+GGG | 0.550386 | 4.3:+33857935 | MS.gene50710:CDS |
| ATGATAAACCAATTTGGAGC+TGG | 0.554914 | 4.3:+33855748 | MS.gene50710:CDS |
| CCAGACATCGGTTATGCTGT+AGG | 0.556943 | 4.3:+33857989 | MS.gene50710:CDS |
| ACAGGAAAGTTAGATGATGT+TGG | 0.558841 | 4.3:+33855724 | MS.gene50710:intron |
| TCAAGGAGAGTTAATGGTGT+CGG | 0.561514 | 4.3:+33853227 | MS.gene50710:CDS |
| GTCTGGCCTCGTGCAGACCA+TGG | 0.563338 | 4.3:-33857972 | None:intergenic |
| GAACTGTGGCACAAACGACT+TGG | 0.565258 | 4.3:+33855892 | MS.gene50710:CDS |
| ACCACAATGGTATAAGCTTG+AGG | 0.568465 | 4.3:+33853182 | MS.gene50710:CDS |
| CTGTTCAATGCTCAAAAGCA+AGG | 0.571539 | 4.3:-33853547 | None:intergenic |
| TTGGATTAATCTTCATCGGA+CGG | 0.572163 | 4.3:-33853470 | None:intergenic |
| CCAGGTAGCGGAACATGCAC+AGG | 0.572979 | 4.3:-33857848 | None:intergenic |
| TTAATGGTGTCGGTTTGGAT+GGG | 0.579322 | 4.3:+33853237 | MS.gene50710:CDS |
| CTAAGTTCCCTAGAACACCT+TGG | 0.582060 | 4.3:-33853437 | None:intergenic |
| AAAATTCATACCAATGACAA+TGG | 0.582534 | 4.3:+33858496 | MS.gene50710:CDS |
| TTACTGAGTTTCATATGACC+AGG | 0.584762 | 4.3:-33857866 | None:intergenic |
| CCCTCAAGCTTATACCATTG+TGG | 0.584899 | 4.3:-33853183 | None:intergenic |
| AATCATCTTCCAAACATCAA+GGG | 0.591800 | 4.3:+33855952 | MS.gene50710:CDS |
| GGTAGATGGAAGCTCAGTAA+GGG | 0.593603 | 4.3:+33855769 | MS.gene50710:CDS |
| GGCTCTCTGTATGTTATGCA+GGG | 0.593689 | 4.3:+33855823 | MS.gene50710:CDS |
| CATCTGAATGCCAAGCATCA+GGG | 0.599442 | 4.3:-33853281 | None:intergenic |
| TGAAACTTGGAAGTTTCCTA+GGG | 0.605034 | 4.3:+33852959 | MS.gene50710:CDS |
| AAAAGCAAGGACTCGTCGAA+AGG | 0.608983 | 4.3:-33853534 | None:intergenic |
| GGGTAGCCTTATGTACGCCA+TGG | 0.613486 | 4.3:+33857955 | MS.gene50710:CDS |
| TTGTACCAAACACTAGCTGT+TGG | 0.613876 | 4.3:-33853654 | None:intergenic |
| TCAAATCCTCATTCCATACA+GGG | 0.614281 | 4.3:-33853494 | None:intergenic |
| ATCTTAAAGATGTAGAGAGA+AGG | 0.614320 | 4.3:+33853619 | MS.gene50710:CDS |
| ACTATCCTTTGATTAGTTTG+GGG | 0.614975 | 4.3:-33858593 | None:intergenic |
| AAAATCACAATCAAAACCAA+AGG | 0.619383 | 4.3:+33852746 | MS.gene50710:CDS |
| AACAGTGAGATCTTTATCCA+AGG | 0.625097 | 4.3:+33853420 | MS.gene50710:CDS |
| AGAAAACCTCAAACCCTGAG+TGG | 0.640349 | 4.3:+33852998 | MS.gene50710:CDS |
| GTCTGCACGAGGCCAGACAT+CGG | 0.643214 | 4.3:+33857977 | MS.gene50710:CDS |
| AGAGAAAGAAGAAATGAGCA+AGG | 0.645001 | 4.3:+33857913 | MS.gene50710:CDS |
| TATGCAGGGAAAGATAAACA+AGG | 0.666815 | 4.3:+33855837 | MS.gene50710:CDS |
| ATGCAGGGAAAGATAAACAA+GGG | 0.675651 | 4.3:+33855838 | MS.gene50710:CDS |
| AGTTTCATATGACCAGGTAG+CGG | 0.678545 | 4.3:-33857860 | None:intergenic |
| AATGCTGGAAGAGTGATAAG+TGG | 0.693473 | 4.3:+33852814 | MS.gene50710:CDS |
| GGAAGCATGATCATTGCTCG+TGG | 0.693757 | 4.3:+33855790 | MS.gene50710:CDS |
| TGTACGCCATGGTCTGCACG+AGG | 0.697121 | 4.3:+33857966 | MS.gene50710:CDS |
| AAGTTTCCTAGGGACAACAA+AGG | 0.704320 | 4.3:+33852969 | MS.gene50710:CDS |
| ATAGTCCTTTAGCACCACAA+TGG | 0.708494 | 4.3:+33853169 | MS.gene50710:CDS |
| GGTGCTAAAGGACTATCGGG+AGG | 0.726758 | 4.3:-33853162 | None:intergenic |
| AAGACATGAGCAAAGAACTG+TGG | 0.731330 | 4.3:+33855878 | MS.gene50710:CDS |
| TGAATATGTAAACTTCACTG+AGG | 0.746200 | 4.3:+33857010 | MS.gene50710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGAAGATTTTGATTTAA+AGG | + | chr4.3:33852774-33852793 | MS.gene50710:CDS | 15.0% |
| !! | AATCTCCACTATAATAATAA+TGG | - | chr4.3:33854125-33854144 | None:intergenic | 20.0% |
| !! | ATCTCCACTATAATAATAAT+GGG | - | chr4.3:33854124-33854143 | None:intergenic | 20.0% |
| !! | TATTCCCATTATTATTATAG+TGG | + | chr4.3:33854117-33854136 | MS.gene50710:intron | 20.0% |
| !!! | CTTTAGAAAAAGAAAAAACT+TGG | - | chr4.3:33853026-33853045 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTTTCTAAAGAG+AGG | + | chr4.3:33853028-33853047 | MS.gene50710:CDS | 20.0% |
| ! | AAAATCACAATCAAAACCAA+AGG | + | chr4.3:33852746-33852765 | MS.gene50710:CDS | 25.0% |
| ! | AAAATTCATACCAATGACAA+TGG | + | chr4.3:33858496-33858515 | MS.gene50710:CDS | 25.0% |
| ! | AAATGTTTAAGAACAGACAA+CGG | + | chr4.3:33856258-33856277 | MS.gene50710:intron | 25.0% |
| ! | AATTTCTGATATTCCTATGA+GGG | + | chr4.3:33853137-33853156 | MS.gene50710:CDS | 25.0% |
| ! | TCAACAAGATCAAATGTTAT+TGG | - | chr4.3:33852850-33852869 | None:intergenic | 25.0% |
| ! | TGCAAAAGTAATCAAATATC+CGG | - | chr4.3:33858194-33858213 | None:intergenic | 25.0% |
| ! | TTCTTCTCATCATATCAAAA+AGG | + | chr4.3:33855556-33855575 | MS.gene50710:intron | 25.0% |
| ! | TTTGTGAAGAACTATGAAAA+TGG | + | chr4.3:33857587-33857606 | MS.gene50710:intron | 25.0% |
| !! | AAAACTTCCCAAATCATTTT+GGG | + | chr4.3:33856431-33856450 | MS.gene50710:intron | 25.0% |
| !! | AAACTAAGTTGTTATTACTG+TGG | + | chr4.3:33855295-33855314 | MS.gene50710:intron | 25.0% |
| !! | AAATGAAGTTTCTTTTTGCA+AGG | + | chr4.3:33852872-33852891 | MS.gene50710:CDS | 25.0% |
| !! | AACATACAACAAAAGTATGA+TGG | - | chr4.3:33857618-33857637 | None:intergenic | 25.0% |
| !! | AAGAAATATCTTTTCTGATG+TGG | - | chr4.3:33854391-33854410 | None:intergenic | 25.0% |
| !! | AATGAAGTTTCTTTTTGCAA+GGG | + | chr4.3:33852873-33852892 | MS.gene50710:CDS | 25.0% |
| !! | TATTATAGTGGAGATTTAAG+AGG | + | chr4.3:33854129-33854148 | MS.gene50710:intron | 25.0% |
| !!! | ATATTTGATTACTTTTGCAG+GGG | + | chr4.3:33858195-33858214 | MS.gene50710:intron | 25.0% |
| !!! | GATATTTGATTACTTTTGCA+GGG | + | chr4.3:33858194-33858213 | MS.gene50710:intron | 25.0% |
| !!! | TTTGGTTTTGATTGTGATTT+TGG | - | chr4.3:33852747-33852766 | None:intergenic | 25.0% |
| !!! | TTTTGAAGAAATATTCTCAC+CGG | + | chr4.3:33857280-33857299 | MS.gene50710:intron | 25.0% |
| AAAATTACCAGATGGAAAGA+GGG | + | chr4.3:33857148-33857167 | MS.gene50710:intron | 30.0% | |
| AACTTGAAGGTAAAGAATGT+AGG | + | chr4.3:33853694-33853713 | MS.gene50710:intron | 30.0% | |
| AATCATCTTCCAAACATCAA+GGG | + | chr4.3:33855952-33855971 | MS.gene50710:CDS | 30.0% | |
| ACTATTGTGGTAAACAATTC+AGG | + | chr4.3:33856780-33856799 | MS.gene50710:intron | 30.0% | |
| ACTTGAAGGTAAAGAATGTA+GGG | + | chr4.3:33853695-33853714 | MS.gene50710:intron | 30.0% | |
| AGACAACCAATAAGGAAAAA+TGG | + | chr4.3:33857066-33857085 | MS.gene50710:CDS | 30.0% | |
| ATAATTCTTAGTATGCTCTG+TGG | + | chr4.3:33854345-33854364 | MS.gene50710:intron | 30.0% | |
| ATCTCAAGAAAGTTCTTGAA+AGG | + | chr4.3:33857804-33857823 | MS.gene50710:CDS | 30.0% | |
| ATCTTAAAGATGTAGAGAGA+AGG | + | chr4.3:33853619-33853638 | MS.gene50710:CDS | 30.0% | |
| ATGAGAAGAATTCTTCATGA+GGG | - | chr4.3:33855546-33855565 | None:intergenic | 30.0% | |
| ATGTGAGTAAGTAAAAACCA+CGG | - | chr4.3:33854165-33854184 | None:intergenic | 30.0% | |
| CAATTTCTGATATTCCTATG+AGG | + | chr4.3:33853136-33853155 | MS.gene50710:CDS | 30.0% | |
| CTATTGTGGTAAACAATTCA+GGG | + | chr4.3:33856781-33856800 | MS.gene50710:intron | 30.0% | |
| CTGATTTACAATACCTTTGA+AGG | - | chr4.3:33854987-33855006 | None:intergenic | 30.0% | |
| GAACATAACTTTCTTGATTC+TGG | - | chr4.3:33858348-33858367 | None:intergenic | 30.0% | |
| GTTAAAACAGCATTCTTACA+TGG | + | chr4.3:33857377-33857396 | MS.gene50710:intron | 30.0% | |
| GTTGGTATGATAAACCAATT+TGG | + | chr4.3:33855742-33855761 | MS.gene50710:CDS | 30.0% | |
| TAAAATTACCAGATGGAAAG+AGG | + | chr4.3:33857147-33857166 | MS.gene50710:intron | 30.0% | |
| TAGATACAACTCTCACAAAT+TGG | - | chr4.3:33854053-33854072 | None:intergenic | 30.0% | |
| TAGTGATATATTGCATGTCT+AGG | + | chr4.3:33854432-33854451 | MS.gene50710:intron | 30.0% | |
| TATTCCATGAGATTTACAGT+AGG | - | chr4.3:33856310-33856329 | None:intergenic | 30.0% | |
| TATTGTGGTAAACAATTCAG+GGG | + | chr4.3:33856782-33856801 | MS.gene50710:intron | 30.0% | |
| TCACGATCATAATTCATTTG+AGG | - | chr4.3:33856816-33856835 | None:intergenic | 30.0% | |
| TCATATCAAAAAGGAGACTT+TGG | + | chr4.3:33855565-33855584 | MS.gene50710:intron | 30.0% | |
| TCCAACAAGCATGAAAATTT+GGG | + | chr4.3:33853582-33853601 | MS.gene50710:CDS | 30.0% | |
| TGTATATTTCTCCTAGACTT+TGG | + | chr4.3:33853349-33853368 | MS.gene50710:CDS | 30.0% | |
| TTAAGCCTATAAATAGCACA+CGG | + | chr4.3:33853878-33853897 | MS.gene50710:intron | 30.0% | |
| TTCCAACAAGCATGAAAATT+TGG | + | chr4.3:33853581-33853600 | MS.gene50710:CDS | 30.0% | |
| TTCTTTGGATCGATTATATC+AGG | - | chr4.3:33855388-33855407 | None:intergenic | 30.0% | |
| TTGTTTACCACAATAGTCTT+TGG | - | chr4.3:33856777-33856796 | None:intergenic | 30.0% | |
| TTTACTTACTCACATTGAGA+AGG | + | chr4.3:33854170-33854189 | MS.gene50710:intron | 30.0% | |
| ! | AAACTTCCCAAATCATTTTG+GGG | + | chr4.3:33856432-33856451 | MS.gene50710:intron | 30.0% |
| ! | AATCTTCTTTTTGCTTCCTT+TGG | - | chr4.3:33852765-33852784 | None:intergenic | 30.0% |
| ! | AGCTTCGATCAATGTATTTT+CGG | - | chr4.3:33854805-33854824 | None:intergenic | 30.0% |
| ! | CAAAACTCTATCTTCTCTTT+TGG | - | chr4.3:33858547-33858566 | None:intergenic | 30.0% |
| ! | CAAAACTTCCCAAATCATTT+TGG | + | chr4.3:33856430-33856449 | MS.gene50710:intron | 30.0% |
| ! | TCTTTACCTTCAAGTTCTTT+AGG | - | chr4.3:33853690-33853709 | None:intergenic | 30.0% |
| ! | TTTCTCGGGTTTATCTTTTT+GGG | - | chr4.3:33854732-33854751 | None:intergenic | 30.0% |
| ! | TTTTCTCGGGTTTATCTTTT+TGG | - | chr4.3:33854733-33854752 | None:intergenic | 30.0% |
| ! | TTTTCTTGAATCTACATCTC+CGG | - | chr4.3:33858164-33858183 | None:intergenic | 30.0% |
| !! | ATCTTTTGCTATGAAGGATT+TGG | + | chr4.3:33857703-33857722 | MS.gene50710:intron | 30.0% |
| !! | ATGAACTTGGCTTTAGATTA+TGG | + | chr4.3:33856667-33856686 | MS.gene50710:intron | 30.0% |
| !! | ATTGGTTGATTTTGGTCTAT+CGG | - | chr4.3:33856876-33856895 | None:intergenic | 30.0% |
| !! | GGATATTTGATTACTTTTGC+AGG | + | chr4.3:33858193-33858212 | MS.gene50710:intron | 30.0% |
| !! | TATTTGATTACTTTTGCAGG+GGG | + | chr4.3:33858196-33858215 | MS.gene50710:intron | 30.0% |
| !! | TCTTTTGCTATGAAGGATTT+GGG | + | chr4.3:33857704-33857723 | MS.gene50710:intron | 30.0% |
| !! | TGAACTTGGCTTTAGATTAT+GGG | + | chr4.3:33856668-33856687 | MS.gene50710:intron | 30.0% |
| !!! | TTTGATTGTGATTTTGGTTC+TGG | - | chr4.3:33852741-33852760 | None:intergenic | 30.0% |
| AAAAAACTTGGTTCCACTCA+GGG | - | chr4.3:33853014-33853033 | None:intergenic | 35.0% | |
| AAAGACTCTCAAATGACCAT+AGG | - | chr4.3:33856556-33856575 | None:intergenic | 35.0% | |
| AAAGCTAGATGCTAAGATGA+AGG | + | chr4.3:33856617-33856636 | MS.gene50710:intron | 35.0% | |
| AACAGTGAGATCTTTATCCA+AGG | + | chr4.3:33853420-33853439 | MS.gene50710:CDS | 35.0% | |
| AACGACAAAGAAATTCTCGT+TGG | - | chr4.3:33855446-33855465 | None:intergenic | 35.0% | |
| AACTTCTTGTACCATTGTCT+TGG | - | chr4.3:33857512-33857531 | None:intergenic | 35.0% | |
| AATATGGTGAAGCTTGATCA+AGG | + | chr4.3:33853210-33853229 | MS.gene50710:CDS | 35.0% | |
| ACAGGAAAGTTAGATGATGT+TGG | + | chr4.3:33855724-33855743 | MS.gene50710:intron | 35.0% | |
| ACTCAAAATAGGCACTTTAG+CGG | - | chr4.3:33854236-33854255 | None:intergenic | 35.0% | |
| ACTCCTTCAAGACCTTTAAA+TGG | + | chr4.3:33856492-33856511 | MS.gene50710:intron | 35.0% | |
| ACTTGATCTTTCGTCTTCAA+TGG | - | chr4.3:33856180-33856199 | None:intergenic | 35.0% | |
| AGAATTCGACATACCATTCA+AGG | + | chr4.3:33858404-33858423 | MS.gene50710:intron | 35.0% | |
| AGAGAAAGAAGAAATGAGCA+AGG | + | chr4.3:33857913-33857932 | MS.gene50710:CDS | 35.0% | |
| AGATTAATCCAAACCCTGTA+TGG | + | chr4.3:33853481-33853500 | MS.gene50710:CDS | 35.0% | |
| AGTAATCAAATATCCGGATG+TGG | - | chr4.3:33858188-33858207 | None:intergenic | 35.0% | |
| ATACCAATGCGTATGAGTTA+TGG | + | chr4.3:33854846-33854865 | MS.gene50710:intron | 35.0% | |
| ATACCAGATGAAGTATGGTA+TGG | + | chr4.3:33856519-33856538 | MS.gene50710:intron | 35.0% | |
| ATCAAATCCTCATTCCATAC+AGG | - | chr4.3:33853498-33853517 | None:intergenic | 35.0% | |
| ATCGTTCAAAAAGAATGCTG+TGG | + | chr4.3:33857765-33857784 | MS.gene50710:intron | 35.0% | |
| ATCTGCACTCAAACTTTCTA+TGG | - | chr4.3:33855330-33855349 | None:intergenic | 35.0% | |
| ATGCAGGGAAAGATAAACAA+GGG | + | chr4.3:33855838-33855857 | MS.gene50710:CDS | 35.0% | |
| ATGTTTGCTCTACATCTGAA+AGG | + | chr4.3:33856088-33856107 | MS.gene50710:intron | 35.0% | |
| ATTGTGGTAAACAATTCAGG+GGG | + | chr4.3:33856783-33856802 | MS.gene50710:intron | 35.0% | |
| ATTTCCTGTGTAACTCAAGA+TGG | + | chr4.3:33854592-33854611 | MS.gene50710:intron | 35.0% | |
| CAAAAGCCTAAAGAACTTGA+AGG | + | chr4.3:33853681-33853700 | MS.gene50710:CDS | 35.0% | |
| CAAGTTTCACTTCCACAAAA+GGG | - | chr4.3:33852948-33852967 | None:intergenic | 35.0% | |
| CAGAAATTGTGAATGCTACT+CGG | - | chr4.3:33853125-33853144 | None:intergenic | 35.0% | |
| CCAATAAGGAAAAATGGTTG+CGG | + | chr4.3:33857072-33857091 | MS.gene50710:CDS | 35.0% | |
| CCATATAGATTTCTTCCTCT+AGG | - | chr4.3:33857406-33857425 | None:intergenic | 35.0% | |
| CCATCAAAAAGATACTTCTC+AGG | + | chr4.3:33856987-33857006 | MS.gene50710:CDS | 35.0% | |
| CCTAGAGGAAGAAATCTATA+TGG | + | chr4.3:33857403-33857422 | MS.gene50710:intron | 35.0% | |
| CGCTTGAAGAAAAGTCTATA+CGG | + | chr4.3:33857473-33857492 | MS.gene50710:intron | 35.0% | |
| CTAACTTTCCTGTTGAGATA+AGG | - | chr4.3:33855717-33855736 | None:intergenic | 35.0% | |
| GAATCATCTTCCAAACATCA+AGG | + | chr4.3:33855951-33855970 | MS.gene50710:CDS | 35.0% | |
| GAGCATCTAAATACCTTCAA+AGG | + | chr4.3:33854971-33854990 | MS.gene50710:intron | 35.0% | |
| GATCCAAAGAAGAAAGAAGA+TGG | + | chr4.3:33855397-33855416 | MS.gene50710:intron | 35.0% | |
| GATGAGAAGAATTCTTCATG+AGG | - | chr4.3:33855547-33855566 | None:intergenic | 35.0% | |
| GATTCAAGAAAATCCACATC+CGG | + | chr4.3:33858172-33858191 | MS.gene50710:intron | 35.0% | |
| GCTTATCGTTGGAAAAGATA+AGG | + | chr4.3:33857646-33857665 | MS.gene50710:intron | 35.0% | |
| GGGTTTGGATTAATCTTCAT+CGG | - | chr4.3:33853477-33853496 | None:intergenic | 35.0% | |
| GTTCCATCTTCTTTCTTCTT+TGG | - | chr4.3:33855403-33855422 | None:intergenic | 35.0% | |
| TAAGAAGCCAAAGACTATTG+TGG | + | chr4.3:33856767-33856786 | MS.gene50710:intron | 35.0% | |
| TAAGCTTGAGGGTCAAAATA+TGG | + | chr4.3:33853194-33853213 | MS.gene50710:CDS | 35.0% | |
| TATGCAGGGAAAGATAAACA+AGG | + | chr4.3:33855837-33855856 | MS.gene50710:CDS | 35.0% | |
| TATGGTCATTTGAGAGTCTT+TGG | + | chr4.3:33856555-33856574 | MS.gene50710:intron | 35.0% | |
| TCAAAAAGGAGACTTTGGTA+TGG | + | chr4.3:33855570-33855589 | MS.gene50710:intron | 35.0% | |
| TCAAATCCTCATTCCATACA+GGG | - | chr4.3:33853497-33853516 | None:intergenic | 35.0% | |
| TCTCCATTTAAAGGTCTTGA+AGG | - | chr4.3:33856498-33856517 | None:intergenic | 35.0% | |
| TCTGGTATCTCTCCATTTAA+AGG | - | chr4.3:33856507-33856526 | None:intergenic | 35.0% | |
| TGAAACTTGGAAGTTTCCTA+GGG | + | chr4.3:33852959-33852978 | MS.gene50710:CDS | 35.0% | |
| TGACTTTCTCTACAATCGTT+CGG | - | chr4.3:33856392-33856411 | None:intergenic | 35.0% | |
| TGAGAAGAATTCTTCATGAG+GGG | - | chr4.3:33855545-33855564 | None:intergenic | 35.0% | |
| TGCTCATTTCTTCTTTCTCT+TGG | - | chr4.3:33857913-33857932 | None:intergenic | 35.0% | |
| TGGTGATATGTTCAAGCTAA+CGG | + | chr4.3:33854634-33854653 | MS.gene50710:intron | 35.0% | |
| TGTGAGTAAGTAAAAACCAC+GGG | - | chr4.3:33854164-33854183 | None:intergenic | 35.0% | |
| TGTTATTACTGTGGCAAACT+GGG | + | chr4.3:33855304-33855323 | MS.gene50710:intron | 35.0% | |
| TTACTGAGTTTCATATGACC+AGG | - | chr4.3:33857869-33857888 | None:intergenic | 35.0% | |
| TTGGATCGATTATATCAGGA+TGG | - | chr4.3:33855384-33855403 | None:intergenic | 35.0% | |
| TTGGATTAATCTTCATCGGA+CGG | - | chr4.3:33853473-33853492 | None:intergenic | 35.0% | |
| TTGTCGCTAGATATAAAGTG+AGG | + | chr4.3:33854409-33854428 | MS.gene50710:intron | 35.0% | |
| TTTCCATACCATACTTCATC+TGG | - | chr4.3:33856525-33856544 | None:intergenic | 35.0% | |
| TTTCTTCTTCCTTCTTCACA+TGG | - | chr4.3:33853783-33853802 | None:intergenic | 35.0% | |
| ! | AATCAACGCCTTTCTTTTGA+TGG | - | chr4.3:33857262-33857281 | None:intergenic | 35.0% |
| ! | AGCTTTGCTCTTTCATCTTT+TGG | - | chr4.3:33856603-33856622 | None:intergenic | 35.0% |
| ! | ATCTTTATCCAAGGTGTTCT+AGG | + | chr4.3:33853429-33853448 | MS.gene50710:CDS | 35.0% |
| ! | ATGATAAACCAATTTGGAGC+TGG | + | chr4.3:33855748-33855767 | MS.gene50710:CDS | 35.0% |
| ! | CTAAAGCCAAGTTCATCTTT+TGG | - | chr4.3:33856663-33856682 | None:intergenic | 35.0% |
| ! | GAGGATTCAAGAACAAGTTT+TGG | + | chr4.3:33853047-33853066 | MS.gene50710:CDS | 35.0% |
| ! | GATGATGATGATGTTGAGAT+GGG | + | chr4.3:33856924-33856943 | MS.gene50710:intron | 35.0% |
| ! | GCCAAAACATAAGCACTTTT+TGG | - | chr4.3:33858098-33858117 | None:intergenic | 35.0% |
| ! | GTGATTCTGGTTACAGATAA+TGG | + | chr4.3:33855640-33855659 | MS.gene50710:intron | 35.0% |
| ! | TCCCAAATTTTCATGCTTGT+TGG | - | chr4.3:33853586-33853605 | None:intergenic | 35.0% |
| ! | TCTTTATCCAAGGTGTTCTA+GGG | + | chr4.3:33853430-33853449 | MS.gene50710:CDS | 35.0% |
| ! | TGATGATGATGATGTTGAGA+TGG | + | chr4.3:33856923-33856942 | MS.gene50710:intron | 35.0% |
| ! | TGCATTTGGATAATTGACTC+AGG | + | chr4.3:33855502-33855521 | MS.gene50710:intron | 35.0% |
| ! | TGGATACTGAGGTATCTAAA+AGG | + | chr4.3:33858067-33858086 | MS.gene50710:intron | 35.0% |
| ! | TTATACCATTGTGGTGCTAA+AGG | - | chr4.3:33853177-33853196 | None:intergenic | 35.0% |
| ! | TTCCATCTGGTAATTTTACC+AGG | - | chr4.3:33857145-33857164 | None:intergenic | 35.0% |
| ! | TTCCTTATTGGTTGTCTCTA+TGG | - | chr4.3:33857063-33857082 | None:intergenic | 35.0% |
| ! | TTGTTATTACTGTGGCAAAC+TGG | + | chr4.3:33855303-33855322 | MS.gene50710:intron | 35.0% |
| ! | TTTTCTCTCACACTCTTATG+AGG | - | chr4.3:33854020-33854039 | None:intergenic | 35.0% |
| !! | AAAGTATTGTGAACCACCAA+GGG | - | chr4.3:33856115-33856134 | None:intergenic | 35.0% |
| !! | AACAAGGTGTGCTTTATTTC+TGG | - | chr4.3:33854906-33854925 | None:intergenic | 35.0% |
| !! | AATTGCCGTGTGCTATTTAT+AGG | - | chr4.3:33853886-33853905 | None:intergenic | 35.0% |
| !! | ACAAGGTGTGCTTTATTTCT+GGG | - | chr4.3:33854905-33854924 | None:intergenic | 35.0% |
| !! | ACTCTAAGATACCAAAGTCT+AGG | - | chr4.3:33853363-33853382 | None:intergenic | 35.0% |
| !! | AGAGGGCATTGAAAAATAAG+TGG | + | chr4.3:33857165-33857184 | MS.gene50710:intron | 35.0% |
| !! | GAGCAAATCTTTTGCTATGA+AGG | + | chr4.3:33857697-33857716 | MS.gene50710:intron | 35.0% |
| !! | GAGGGCATTGAAAAATAAGT+GGG | + | chr4.3:33857166-33857185 | MS.gene50710:intron | 35.0% |
| !! | GTTGATGATATGCTTATCGT+TGG | + | chr4.3:33857635-33857654 | MS.gene50710:intron | 35.0% |
| !!! | AAGTGCCTATTTTGAGTTCA+CGG | + | chr4.3:33854239-33854258 | MS.gene50710:intron | 35.0% |
| !!! | AAGTGCTTATGTTTTGGCAA+TGG | + | chr4.3:33858100-33858119 | MS.gene50710:intron | 35.0% |
| !!! | AGTTTTGGAGATTGTTGTGA+AGG | + | chr4.3:33853062-33853081 | MS.gene50710:CDS | 35.0% |
| !!! | CCTGAGAAGTATCTTTTTGA+TGG | - | chr4.3:33856990-33857009 | None:intergenic | 35.0% |
| !!! | CTTCATGCATTGGTTGATTT+TGG | - | chr4.3:33856884-33856903 | None:intergenic | 35.0% |
| !!! | GCCAAAAAGTGCTTATGTTT+TGG | + | chr4.3:33858094-33858113 | MS.gene50710:intron | 35.0% |
| !!! | GGTTTATCTTTTTGGGTGAT+TGG | - | chr4.3:33854725-33854744 | None:intergenic | 35.0% |
| !!! | TTGCTTTTGAGCATTGAACA+GGG | + | chr4.3:33853549-33853568 | MS.gene50710:CDS | 35.0% |
| AAAGCACGAATTGTCGTGAA+GGG | + | chr4.3:33857233-33857252 | MS.gene50710:intron | 40.0% | |
| AACAGAACCCAATCAAATGG+AGG | + | chr4.3:33856842-33856861 | MS.gene50710:intron | 40.0% | |
| AAGAAGTTCCTGCAAGAGTT+AGG | + | chr4.3:33858322-33858341 | MS.gene50710:intron | 40.0% | |
| AAGACATGAGCAAAGAACTG+TGG | + | chr4.3:33855878-33855897 | MS.gene50710:CDS | 40.0% | |
| AAGTCTATACGGCTTAAAGC+AGG | + | chr4.3:33857484-33857503 | MS.gene50710:intron | 40.0% | |
| AAGTTTCCTAGGGACAACAA+AGG | + | chr4.3:33852969-33852988 | MS.gene50710:CDS | 40.0% | |
| AATCGTTCGGTTCATCCTTT+CGG | - | chr4.3:33856379-33856398 | None:intergenic | 40.0% | |
| AATGCTGGAAGAGTGATAAG+TGG | + | chr4.3:33852814-33852833 | MS.gene50710:CDS | 40.0% | |
| AATGGAAATCAAATGCTCGC+TGG | + | chr4.3:33858118-33858137 | MS.gene50710:intron | 40.0% | |
| AATTCCATGCCTCTGTAGAA+CGG | + | chr4.3:33856217-33856236 | MS.gene50710:intron | 40.0% | |
| ACAACACCAAACATCAATGC+TGG | + | chr4.3:33852799-33852818 | MS.gene50710:CDS | 40.0% | |
| ACAATTCGTGCTTTGTACCT+GGG | - | chr4.3:33857227-33857246 | None:intergenic | 40.0% | |
| ACAGAACCCAATCAAATGGA+GGG | + | chr4.3:33856843-33856862 | MS.gene50710:intron | 40.0% | |
| ACATAGTTATGTCCACCTGA+GGG | + | chr4.3:33854084-33854103 | MS.gene50710:intron | 40.0% | |
| ACATCCATTAGAGCAATCCT+TGG | + | chr4.3:33857314-33857333 | MS.gene50710:intron | 40.0% | |
| ACCAATGCATGAAGAACAGA+TGG | + | chr4.3:33856890-33856909 | MS.gene50710:intron | 40.0% | |
| ACCACAATGGTATAAGCTTG+AGG | + | chr4.3:33853182-33853201 | MS.gene50710:CDS | 40.0% | |
| ACGTCTTTGTGAAGTTGTGT+TGG | - | chr4.3:33857550-33857569 | None:intergenic | 40.0% | |
| ACTTCACCAGTCTTCTAACA+AGG | - | chr4.3:33854922-33854941 | None:intergenic | 40.0% | |
| AGAAGAGATGCAATCTCTGA+AGG | + | chr4.3:33857103-33857122 | MS.gene50710:intron | 40.0% | |
| AGACTTTGGTATGGTGAAGA+TGG | + | chr4.3:33855579-33855598 | MS.gene50710:intron | 40.0% | |
| AGATTGCATCTCTTCTTCCA+TGG | - | chr4.3:33857099-33857118 | None:intergenic | 40.0% | |
| AGCCATAGAGACAACCAATA+AGG | + | chr4.3:33857058-33857077 | MS.gene50710:CDS | 40.0% | |
| AGTAGATTCCTATCAAACCC+AGG | + | chr4.3:33858019-33858038 | MS.gene50710:intron | 40.0% | |
| AGTTCTTCACAAACACGCAA+TGG | - | chr4.3:33857580-33857599 | None:intergenic | 40.0% | |
| AGTTTCATATGACCAGGTAG+CGG | - | chr4.3:33857863-33857882 | None:intergenic | 40.0% | |
| ATAAGGTTTAGACGCATGTC+TGG | - | chr4.3:33855700-33855719 | None:intergenic | 40.0% | |
| ATAGTCCTTTAGCACCACAA+TGG | + | chr4.3:33853169-33853188 | MS.gene50710:CDS | 40.0% | |
| ATCTATATGGAGCAACCTGA+AGG | + | chr4.3:33857416-33857435 | MS.gene50710:intron | 40.0% | |
| ATGAAAGTTTCCCTGATGCT+TGG | + | chr4.3:33853271-33853290 | MS.gene50710:CDS | 40.0% | |
| ATTCTTACATGGAGACCTAG+AGG | + | chr4.3:33857388-33857407 | MS.gene50710:intron | 40.0% | |
| ATTGCTCGTGGTAAAAAGGA+AGG | + | chr4.3:33855802-33855821 | MS.gene50710:CDS | 40.0% | |
| CACATATTGGAAGCCAATGA+TGG | + | chr4.3:33854667-33854686 | MS.gene50710:intron | 40.0% | |
| CAGATGATGCAAGAAGAAGA+AGG | + | chr4.3:33856040-33856059 | MS.gene50710:intron | 40.0% | |
| CATATCTGCTCCATTGTCAT+TGG | - | chr4.3:33858509-33858528 | None:intergenic | 40.0% | |
| CATCTGAATGAACAAGATCG+AGG | - | chr4.3:33856071-33856090 | None:intergenic | 40.0% | |
| CCAAGTTTCACTTCCACAAA+AGG | - | chr4.3:33852949-33852968 | None:intergenic | 40.0% | |
| CCACAATGGTATAAGCTTGA+GGG | + | chr4.3:33853183-33853202 | MS.gene50710:CDS | 40.0% | |
| CGTCTAAACCTTATCTCAAC+AGG | + | chr4.3:33855706-33855725 | MS.gene50710:intron | 40.0% | |
| CGTCTTTGTGAAGTTGTGTT+GGG | - | chr4.3:33857549-33857568 | None:intergenic | 40.0% | |
| CTGTCTGATCTTCTCAATTG+AGG | - | chr4.3:33856957-33856976 | None:intergenic | 40.0% | |
| CTGTTCAATGCTCAAAAGCA+AGG | - | chr4.3:33853550-33853569 | None:intergenic | 40.0% | |
| GAAAAAACTTGGTTCCACTC+AGG | - | chr4.3:33853015-33853034 | None:intergenic | 40.0% | |
| GAAGAGTGATAAGTGGTGAT+AGG | + | chr4.3:33852821-33852840 | MS.gene50710:CDS | 40.0% | |
| GAATACAAATCTTCACCCTC+AGG | - | chr4.3:33854102-33854121 | None:intergenic | 40.0% | |
| GACCTGGTAAAATTACCAGA+TGG | + | chr4.3:33857140-33857159 | MS.gene50710:intron | 40.0% | |
| GACGAAAGATCAAGTTCTTC+AGG | + | chr4.3:33856185-33856204 | MS.gene50710:intron | 40.0% | |
| GACTTTGGTATGGTGAAGAT+GGG | + | chr4.3:33855580-33855599 | MS.gene50710:intron | 40.0% | |
| GAGAGATACCAGATGAAGTA+TGG | + | chr4.3:33856514-33856533 | MS.gene50710:intron | 40.0% | |
| GATCATTGCTCGTGGTAAAA+AGG | + | chr4.3:33855798-33855817 | MS.gene50710:CDS | 40.0% | |
| GCATCACTATGCACTACTAT+TGG | - | chr4.3:33853726-33853745 | None:intergenic | 40.0% | |
| GCCTTTGAGCAACAAATCTT+GGG | - | chr4.3:33853400-33853419 | None:intergenic | 40.0% | |
| GCTAACAGAACCCAATCAAA+TGG | + | chr4.3:33856839-33856858 | MS.gene50710:intron | 40.0% | |
| GCTTCACCCCAAAATGATTT+GGG | - | chr4.3:33856441-33856460 | None:intergenic | 40.0% | |
| GCTTCTTAGATTGAATGTCG+TGG | - | chr4.3:33856755-33856774 | None:intergenic | 40.0% | |
| GCTTGAACATATCACCATCA+TGG | - | chr4.3:33854631-33854650 | None:intergenic | 40.0% | |
| GCTTGATCAAGGAGAGTTAA+TGG | + | chr4.3:33853221-33853240 | MS.gene50710:CDS | 40.0% | |
| GGAAGTCTTTGCAATACAAG+TGG | - | chr4.3:33854697-33854716 | None:intergenic | 40.0% | |
| GGTTCACCAAAAGATGAACT+TGG | + | chr4.3:33856654-33856673 | MS.gene50710:intron | 40.0% | |
| GTATACGATACTAGTCACAC+TGG | + | chr4.3:33854558-33854577 | MS.gene50710:intron | 40.0% | |
| GTCTTGACTCTTCATTCAAC+AGG | - | chr4.3:33855156-33855175 | None:intergenic | 40.0% | |
| GTGAAACTTGGAAGTTTCCT+AGG | + | chr4.3:33852958-33852977 | MS.gene50710:CDS | 40.0% | |
| GTTGCAAGTATCAGACTTAC+CGG | - | chr4.3:33852926-33852945 | None:intergenic | 40.0% | |
| TACAAGTGGTCTTCCATCAT+TGG | - | chr4.3:33854683-33854702 | None:intergenic | 40.0% | |
| TACATAGTTATGTCCACCTG+AGG | + | chr4.3:33854083-33854102 | MS.gene50710:intron | 40.0% | |
| TAGACCAAGGATTGCTCTAA+TGG | - | chr4.3:33857321-33857340 | None:intergenic | 40.0% | |
| TATGGAAAGAAAGCCTCCTA+TGG | + | chr4.3:33856537-33856556 | MS.gene50710:intron | 40.0% | |
| TCAAGGAGAGTTAATGGTGT+CGG | + | chr4.3:33853227-33853246 | MS.gene50710:CDS | 40.0% | |
| TCATTGGATACGTGATGTGT+TGG | + | chr4.3:33858450-33858469 | MS.gene50710:intron | 40.0% | |
| TCCAGATGGAAAACTTAGCA+TGG | + | chr4.3:33855114-33855133 | MS.gene50710:intron | 40.0% | |
| TCTTTCTCTTGGTCATTCTC+TGG | - | chr4.3:33857902-33857921 | None:intergenic | 40.0% | |
| TGAAGAAATATTCTCACCGG+TGG | + | chr4.3:33857283-33857302 | MS.gene50710:intron | 40.0% | |
| TGCCTTTGAGCAACAAATCT+TGG | - | chr4.3:33853401-33853420 | None:intergenic | 40.0% | |
| TGCTTCACCCCAAAATGATT+TGG | - | chr4.3:33856442-33856461 | None:intergenic | 40.0% | |
| TGGTTACGTAGATGCTGATA+TGG | + | chr4.3:33858138-33858157 | MS.gene50710:intron | 40.0% | |
| TGTTTAAGAACAGACAACGG+TGG | + | chr4.3:33856261-33856280 | MS.gene50710:intron | 40.0% | |
| TTCATGAGGGGTTACATGAA+AGG | - | chr4.3:33855533-33855552 | None:intergenic | 40.0% | |
| TTCTCTCAACTCTATGAGTG+AGG | - | chr4.3:33853984-33854003 | None:intergenic | 40.0% | |
| TTGCATGTCTAGGAAAGTTC+TGG | + | chr4.3:33854442-33854461 | MS.gene50710:intron | 40.0% | |
| TTGTACCAAACACTAGCTGT+TGG | - | chr4.3:33853657-33853676 | None:intergenic | 40.0% | |
| ! | ACATCGATGTGAGGTATCAT+TGG | + | chr4.3:33858434-33858453 | MS.gene50710:intron | 40.0% |
| ! | ACGATCACTCTAGAAAAGTG+TGG | + | chr4.3:33856148-33856167 | MS.gene50710:intron | 40.0% |
| ! | ATCTGCCTCGTGATTTTTCA+CGG | - | chr4.3:33855261-33855280 | None:intergenic | 40.0% |
| ! | ATGAAGGAGTGCATATACCT+TGG | + | chr4.3:33856633-33856652 | MS.gene50710:intron | 40.0% |
| ! | CCTTTTGTGGAAGTGAAACT+TGG | + | chr4.3:33852946-33852965 | MS.gene50710:CDS | 40.0% |
| ! | CGATCACTCTAGAAAAGTGT+GGG | + | chr4.3:33856149-33856168 | MS.gene50710:intron | 40.0% |
| ! | GTGAAGTTAGAGTACTCAGA+CGG | + | chr4.3:33854935-33854954 | MS.gene50710:intron | 40.0% |
| ! | GTTCATCTTTTGGTGAACCA+AGG | - | chr4.3:33856653-33856672 | None:intergenic | 40.0% |
| ! | GTTCTTTTCCTGGGTTTGAT+AGG | - | chr4.3:33858030-33858049 | None:intergenic | 40.0% |
| ! | TCCATGCTAAGTTTTCCATC+TGG | - | chr4.3:33855118-33855137 | None:intergenic | 40.0% |
| ! | TCTAGAGTGATCGTCAATGA+AGG | - | chr4.3:33856142-33856161 | None:intergenic | 40.0% |
| ! | TGATACTTGCAACCCTTTTG+TGG | + | chr4.3:33852933-33852952 | MS.gene50710:CDS | 40.0% |
| ! | TTGTGGTGCTAAAGGACTAT+CGG | - | chr4.3:33853169-33853188 | None:intergenic | 40.0% |
| ! | TTTTCTTCAAGCGACACACA+AGG | - | chr4.3:33857466-33857485 | None:intergenic | 40.0% |
| !! | ACTCTTCCAGCATTGATGTT+TGG | - | chr4.3:33852808-33852827 | None:intergenic | 40.0% |
| !! | AGGGTTTGAGGTTTTCTCAA+AGG | - | chr4.3:33852995-33853014 | None:intergenic | 40.0% |
| !! | CAAAGTATTGTGAACCACCA+AGG | - | chr4.3:33856116-33856135 | None:intergenic | 40.0% |
| !! | CCGCAACCATTTTTCCTTAT+TGG | - | chr4.3:33857075-33857094 | None:intergenic | 40.0% |
| !! | GAGTTTTGTAAAGAAGCTGC+AGG | + | chr4.3:33858559-33858578 | MS.gene50710:CDS | 40.0% |
| !! | TGATTTTGGTCTATCGGATC+AGG | - | chr4.3:33856870-33856889 | None:intergenic | 40.0% |
| !! | TTAATGGTGTCGGTTTGGAT+GGG | + | chr4.3:33853237-33853256 | MS.gene50710:CDS | 40.0% |
| !!! | CACACAACAAGTTTTTAGCG+TGG | - | chr4.3:33854200-33854219 | None:intergenic | 40.0% |
| !!! | CGATGTGTTTTGACCTTGAA+TGG | - | chr4.3:33858420-33858439 | None:intergenic | 40.0% |
| !!! | CTTGCTTTTGAGCATTGAAC+AGG | + | chr4.3:33853548-33853567 | MS.gene50710:CDS | 40.0% |
| !!! | TATTTTGAGTTCACGGAGGA+GGG | + | chr4.3:33854246-33854265 | MS.gene50710:intron | 40.0% |
| !!! | TGCTTTTGAGCATTGAACAG+GGG | + | chr4.3:33853550-33853569 | MS.gene50710:CDS | 40.0% |
| AAAAGCAAGGACTCGTCGAA+AGG | - | chr4.3:33853537-33853556 | None:intergenic | 45.0% | |
| AAACATCAAGGGTCAACCAC+TGG | + | chr4.3:33855963-33855982 | MS.gene50710:intron | 45.0% | |
| AAATTCCCAGGTAAGAGAGG+TGG | - | chr4.3:33854504-33854523 | None:intergenic | 45.0% | |
| AAGCACGAATTGTCGTGAAG+GGG | + | chr4.3:33857234-33857253 | MS.gene50710:intron | 45.0% | |
| AAGGTTGTAAGGAGATCCTG+TGG | + | chr4.3:33858296-33858315 | MS.gene50710:intron | 45.0% | |
| AATTCCCAGGTAAGAGAGGT+GGG | - | chr4.3:33854503-33854522 | None:intergenic | 45.0% | |
| ACAAGCAAGATTGCTGGCAT+TGG | + | chr4.3:33855613-33855632 | MS.gene50710:intron | 45.0% | |
| ACATTAGGGTGATCAGCAAC+GGG | - | chr4.3:33853096-33853115 | None:intergenic | 45.0% | |
| ACGTCGTTGACAATAGAGGA+AGG | + | chr4.3:33855212-33855231 | MS.gene50710:intron | 45.0% | |
| AGAAAAAGACCGCTACCGAA+TGG | + | chr4.3:33854747-33854766 | MS.gene50710:intron | 45.0% | |
| AGAAAACCTCAAACCCTGAG+TGG | + | chr4.3:33852998-33853017 | MS.gene50710:CDS | 45.0% | |
| AGATGAATGGAGTAGCCGAA+AGG | + | chr4.3:33856361-33856380 | MS.gene50710:intron | 45.0% | |
| AGCAAGAACCGTGAAAAAGG+TGG | + | chr4.3:33855235-33855254 | MS.gene50710:intron | 45.0% | |
| AGCACACCTTGTTAGAAGAC+TGG | + | chr4.3:33854913-33854932 | MS.gene50710:intron | 45.0% | |
| AGGAGAACCTCAAAGCTTCA+TGG | + | chr4.3:33857034-33857053 | MS.gene50710:CDS | 45.0% | |
| AGGAGCAAGAACCGTGAAAA+AGG | + | chr4.3:33855232-33855251 | MS.gene50710:intron | 45.0% | |
| AGGCTCTCTGTATGTTATGC+AGG | + | chr4.3:33855822-33855841 | MS.gene50710:CDS | 45.0% | |
| AGTGGTTGACCCTTGATGTT+TGG | - | chr4.3:33855964-33855983 | None:intergenic | 45.0% | |
| ATCCTTCAAGAGAGATCAGC+AGG | + | chr4.3:33855348-33855367 | MS.gene50710:intron | 45.0% | |
| ATGGATGTCATCTTCACCAC+CGG | - | chr4.3:33857302-33857321 | None:intergenic | 45.0% | |
| ATGGCTTCCATGAAGCTTTG+AGG | - | chr4.3:33857044-33857063 | None:intergenic | 45.0% | |
| ATTCATCTGAGGAGTCTTGG+GGG | - | chr4.3:33856349-33856368 | None:intergenic | 45.0% | |
| ATTCCATGCCTCTGTAGAAC+GGG | + | chr4.3:33856218-33856237 | MS.gene50710:intron | 45.0% | |
| CAAACCCAGGAAAAGAACAC+TGG | + | chr4.3:33858032-33858051 | MS.gene50710:intron | 45.0% | |
| CAAAGCACGAATTGTCGTGA+AGG | + | chr4.3:33857232-33857251 | MS.gene50710:intron | 45.0% | |
| CAACTCCAACAGCTAGTGTT+TGG | + | chr4.3:33853649-33853668 | MS.gene50710:CDS | 45.0% | |
| CAATCTTCACAGGATTCCAG+TGG | - | chr4.3:33855982-33856001 | None:intergenic | 45.0% | |
| CAATTCGTGCTTTGTACCTG+GGG | - | chr4.3:33857226-33857245 | None:intergenic | 45.0% | |
| CACTATGCACTACTATTGGC+TGG | - | chr4.3:33853722-33853741 | None:intergenic | 45.0% | |
| CAGAACCCAATCAAATGGAG+GGG | + | chr4.3:33856844-33856863 | MS.gene50710:intron | 45.0% | |
| CAGTTCCTTACCTGAGAGTT+GGG | + | chr4.3:33855060-33855079 | MS.gene50710:intron | 45.0% | |
| CATCTGAATGCCAAGCATCA+GGG | - | chr4.3:33853284-33853303 | None:intergenic | 45.0% | |
| CATTCATCTGAGGAGTCTTG+GGG | - | chr4.3:33856350-33856369 | None:intergenic | 45.0% | |
| CCACATGAGCGAGAAAAGTT+TGG | + | chr4.3:33855915-33855934 | MS.gene50710:CDS | 45.0% | |
| CCATCCATCTTGAGTTACAC+AGG | - | chr4.3:33854599-33854618 | None:intergenic | 45.0% | |
| CCATTCATCTGAGGAGTCTT+GGG | - | chr4.3:33856351-33856370 | None:intergenic | 45.0% | |
| CCCTCAAGCTTATACCATTG+TGG | - | chr4.3:33853186-33853205 | None:intergenic | 45.0% | |
| CCTGTGTAACTCAAGATGGA+TGG | + | chr4.3:33854596-33854615 | MS.gene50710:intron | 45.0% | |
| CGAACCATCTTCTTAGTAGC+AGG | - | chr4.3:33856696-33856715 | None:intergenic | 45.0% | |
| CGCAATCACTGAAGGTTGTA+AGG | + | chr4.3:33858285-33858304 | MS.gene50710:intron | 45.0% | |
| CGGCTGACAACTACACATAT+TGG | + | chr4.3:33854654-33854673 | MS.gene50710:intron | 45.0% | |
| CGTCCATAACTCATACGCAT+TGG | - | chr4.3:33854852-33854871 | None:intergenic | 45.0% | |
| CTAAGTTCCCTAGAACACCT+TGG | - | chr4.3:33853440-33853459 | None:intergenic | 45.0% | |
| CTACCCACAGCTGAAGAATA+GGG | - | chr4.3:33857941-33857960 | None:intergenic | 45.0% | |
| CTACTCGGCCAATGACATTA+GGG | - | chr4.3:33853110-33853129 | None:intergenic | 45.0% | |
| CTAGTTTAGCAGCTAGACCA+AGG | - | chr4.3:33857334-33857353 | None:intergenic | 45.0% | |
| CTCCTCCGTGAACTCAAAAT+AGG | - | chr4.3:33854247-33854266 | None:intergenic | 45.0% | |
| GAAAAAGACCGCTACCGAAT+GGG | + | chr4.3:33854748-33854767 | MS.gene50710:intron | 45.0% | |
| GACAATTCGTGCTTTGTACC+TGG | - | chr4.3:33857228-33857247 | None:intergenic | 45.0% | |
| GACATTAGGGTGATCAGCAA+CGG | - | chr4.3:33853097-33853116 | None:intergenic | 45.0% | |
| GACTCTCAAATGACCATAGG+AGG | - | chr4.3:33856553-33856572 | None:intergenic | 45.0% | |
| GAGTACATCGCAATCACTGA+AGG | + | chr4.3:33858277-33858296 | MS.gene50710:intron | 45.0% | |
| GAGTCAAGACGAAGAGAAAG+AGG | + | chr4.3:33855166-33855185 | MS.gene50710:intron | 45.0% | |
| GATGGTTCAATCAGCCATGA+TGG | + | chr4.3:33854614-33854633 | MS.gene50710:intron | 45.0% | |
| GATGTCACAAGCAAGATTGC+TGG | + | chr4.3:33855607-33855626 | MS.gene50710:intron | 45.0% | |
| GCAGCCTACTGTAAATCTCA+TGG | + | chr4.3:33856303-33856322 | MS.gene50710:intron | 45.0% | |
| GCCAAAGACTTACCAGAAAC+CGG | + | chr4.3:33852904-33852923 | MS.gene50710:CDS | 45.0% | |
| GCCATCTGTTCTTCATGCAT+TGG | - | chr4.3:33856894-33856913 | None:intergenic | 45.0% | |
| GCTGATCACCCTAATGTCAT+TGG | + | chr4.3:33853099-33853118 | MS.gene50710:CDS | 45.0% | |
| GGAAAATTCCCAGGTAAGAG+AGG | - | chr4.3:33854507-33854526 | None:intergenic | 45.0% | |
| GGATCCTGCTACTAAGAAGA+TGG | + | chr4.3:33856689-33856708 | MS.gene50710:intron | 45.0% | |
| GGCTCTCTGTATGTTATGCA+GGG | + | chr4.3:33855823-33855842 | MS.gene50710:CDS | 45.0% | |
| GGTAGATGGAAGCTCAGTAA+GGG | + | chr4.3:33855769-33855788 | MS.gene50710:CDS | 45.0% | |
| GGTATGTCGAATTCTTGCTG+AGG | - | chr4.3:33858399-33858418 | None:intergenic | 45.0% | |
| GGTCAAAACACATCGATGTG+AGG | + | chr4.3:33858425-33858444 | MS.gene50710:intron | 45.0% | |
| GGTGCAGTGAAGAAGATTCT+TGG | + | chr4.3:33857725-33857744 | MS.gene50710:intron | 45.0% | |
| GTGCTGTGAAATGGATACTG+AGG | + | chr4.3:33858056-33858075 | MS.gene50710:intron | 45.0% | |
| GTGGAGATTTAAGAGGCCTA+CGG | + | chr4.3:33854136-33854155 | MS.gene50710:intron | 45.0% | |
| TAAAGCAGGCTCCAAGACAA+TGG | + | chr4.3:33857498-33857517 | MS.gene50710:intron | 45.0% | |
| TACAAATCTTCACCCTCAGG+TGG | - | chr4.3:33854099-33854118 | None:intergenic | 45.0% | |
| TACGTAGATGCTGATATGGC+CGG | + | chr4.3:33858142-33858161 | MS.gene50710:intron | 45.0% | |
| TAGCGTCTGATGACTGCATT+TGG | + | chr4.3:33855488-33855507 | MS.gene50710:intron | 45.0% | |
| TAGTTCGTGAATAGTGCACC+AGG | - | chr4.3:33854528-33854547 | None:intergenic | 45.0% | |
| TCAGTTCCTTACCTGAGAGT+TGG | + | chr4.3:33855059-33855078 | MS.gene50710:intron | 45.0% | |
| TCCAAACCCTGTATGGAATG+AGG | + | chr4.3:33853488-33853507 | MS.gene50710:CDS | 45.0% | |
| TCCATCTACCAGCTCCAAAT+TGG | - | chr4.3:33855759-33855778 | None:intergenic | 45.0% | |
| TCCATTCATCTGAGGAGTCT+TGG | - | chr4.3:33856352-33856371 | None:intergenic | 45.0% | |
| TCCTCATTCCATACAGGGTT+TGG | - | chr4.3:33853492-33853511 | None:intergenic | 45.0% | |
| TCCTCTATTGTCAACGACGT+TGG | - | chr4.3:33855212-33855231 | None:intergenic | 45.0% | |
| TCCTGTGAAGATTGTCTAGC+AGG | + | chr4.3:33855988-33856007 | MS.gene50710:intron | 45.0% | |
| TCCTTCTTCACATGGCAAGT+TGG | - | chr4.3:33853775-33853794 | None:intergenic | 45.0% | |
| TCTACATCTGAAAGGTCCCT+TGG | + | chr4.3:33856096-33856115 | MS.gene50710:intron | 45.0% | |
| TGCTGAGGTGAATTGCACTT+TGG | - | chr4.3:33858384-33858403 | None:intergenic | 45.0% | |
| TGGAGATTTAAGAGGCCTAC+GGG | + | chr4.3:33854137-33854156 | MS.gene50710:intron | 45.0% | |
| TGGTAGATGGAAGCTCAGTA+AGG | + | chr4.3:33855768-33855787 | MS.gene50710:CDS | 45.0% | |
| TTCAATGCCCTCTTTCCATC+TGG | - | chr4.3:33857158-33857177 | None:intergenic | 45.0% | |
| TTGTAAAGAAGCTGCAGGCT+TGG | + | chr4.3:33858564-33858583 | MS.gene50710:CDS | 45.0% | |
| ! | ACCAATTTGGAGCTGGTAGA+TGG | + | chr4.3:33855755-33855774 | MS.gene50710:CDS | 45.0% |
| ! | AGTTCTGGCAAGGAAAGACT+TGG | + | chr4.3:33854457-33854476 | MS.gene50710:intron | 45.0% |
| ! | CACTCCAGTGTTCTTTTCCT+GGG | - | chr4.3:33858039-33858058 | None:intergenic | 45.0% |
| ! | CCAAACTTTTCTCGCTCATG+TGG | - | chr4.3:33855918-33855937 | None:intergenic | 45.0% |
| ! | CTCTTACCTGGGAATTTTCC+TGG | + | chr4.3:33854507-33854526 | MS.gene50710:intron | 45.0% |
| ! | GACAACGGTGGAGAGTATAT+AGG | + | chr4.3:33856273-33856292 | MS.gene50710:intron | 45.0% |
| ! | TGTCTAGGAAAGTTCTGGCA+AGG | + | chr4.3:33854447-33854466 | MS.gene50710:intron | 45.0% |
| ! | TGTGGTGCTAAAGGACTATC+GGG | - | chr4.3:33853168-33853187 | None:intergenic | 45.0% |
| !! | AACACTGGAGTGCTGTGAAA+TGG | + | chr4.3:33858047-33858066 | MS.gene50710:intron | 45.0% |
| !! | AAGGGGTGCCATCAAAAGAA+AGG | + | chr4.3:33857251-33857270 | MS.gene50710:intron | 45.0% |
| !! | ACCGGTTTCTGGTAAGTCTT+TGG | - | chr4.3:33852908-33852927 | None:intergenic | 45.0% |
| !! | GAGAGTTAATGGTGTCGGTT+TGG | + | chr4.3:33853232-33853251 | MS.gene50710:CDS | 45.0% |
| !! | GCCCAAGATTTGTTGCTCAA+AGG | + | chr4.3:33853396-33853415 | MS.gene50710:CDS | 45.0% |
| !! | GTATCAGACTTACCGGTTTC+TGG | - | chr4.3:33852919-33852938 | None:intergenic | 45.0% |
| !! | GTTAATGGTGTCGGTTTGGA+TGG | + | chr4.3:33853236-33853255 | MS.gene50710:CDS | 45.0% |
| !! | TTCGGTAGCGGTCTTTTTCT+CGG | - | chr4.3:33854747-33854766 | None:intergenic | 45.0% |
| !! | TTTCACGGCCACCTTTTTCA+CGG | - | chr4.3:33855246-33855265 | None:intergenic | 45.0% |
| !!! | CTATTTTGAGTTCACGGAGG+AGG | + | chr4.3:33854245-33854264 | MS.gene50710:intron | 45.0% |
| !!! | CTTTTTGGGTGATTGGCTCA+TGG | - | chr4.3:33854718-33854737 | None:intergenic | 45.0% |
| !!! | TGCCTATTTTGAGTTCACGG+AGG | + | chr4.3:33854242-33854261 | MS.gene50710:intron | 45.0% |
| AAGAGAACAACCCAAACCCC+AGG | + | chr4.3:33857207-33857226 | MS.gene50710:intron | 50.0% | |
| ACATCTGAAAGGTCCCTTGG+TGG | + | chr4.3:33856099-33856118 | MS.gene50710:intron | 50.0% | |
| ACGGAGGAGGGAAATTATGC+AGG | + | chr4.3:33854258-33854277 | MS.gene50710:intron | 50.0% | |
| AGCCTGCTGATCTCTCTTGA+AGG | - | chr4.3:33855353-33855372 | None:intergenic | 50.0% | |
| AGTGCACCAGGAAAATTCCC+AGG | - | chr4.3:33854516-33854535 | None:intergenic | 50.0% | |
| AGTGTCCCAACTCTCAGGTA+AGG | - | chr4.3:33855068-33855087 | None:intergenic | 50.0% | |
| ATCAGGCCCCTCCATTTGAT+TGG | - | chr4.3:33856853-33856872 | None:intergenic | 50.0% | |
| ATGCAGGCATTTCCCAACAG+TGG | + | chr4.3:33854274-33854293 | MS.gene50710:intron | 50.0% | |
| ATTGACCCACCTCTCTTACC+TGG | + | chr4.3:33854495-33854514 | MS.gene50710:intron | 50.0% | |
| CCCAAGACTCCTCAGATGAA+TGG | + | chr4.3:33856348-33856367 | MS.gene50710:intron | 50.0% | |
| CCTACAGCATAACCGATGTC+TGG | - | chr4.3:33857992-33858011 | None:intergenic | 50.0% | |
| CCTGAAGGTTTCGTTGAACC+AGG | + | chr4.3:33857431-33857450 | MS.gene50710:intron | 50.0% | |
| CCTGGTTCAACGAAACCTTC+AGG | - | chr4.3:33857434-33857453 | None:intergenic | 50.0% | |
| CTCAGCAATTCTGCTCCAGA+TGG | + | chr4.3:33855100-33855119 | MS.gene50710:intron | 50.0% | |
| CTCTAAGCTCGTGTTGAAGG+AGG | + | chr4.3:33855663-33855682 | MS.gene50710:intron | 50.0% | |
| GAACTGTGGCACAAACGACT+TGG | + | chr4.3:33855892-33855911 | MS.gene50710:CDS | 50.0% | |
| GATTCTGGCCTAACTCTTGC+AGG | - | chr4.3:33858333-33858352 | None:intergenic | 50.0% | |
| GCAGGAACTTCTTCATCCAC+AGG | - | chr4.3:33858315-33858334 | None:intergenic | 50.0% | |
| GCATCTGAATGCCAAGCATC+AGG | - | chr4.3:33853285-33853304 | None:intergenic | 50.0% | |
| GCCAACGTCGTTGACAATAG+AGG | + | chr4.3:33855208-33855227 | MS.gene50710:intron | 50.0% | |
| GCCAACTTGCCATGTGAAGA+AGG | + | chr4.3:33853771-33853790 | MS.gene50710:intron | 50.0% | |
| GCCTGCTAGACAATCTTCAC+AGG | - | chr4.3:33855992-33856011 | None:intergenic | 50.0% | |
| GCTACCCACAGCTGAAGAAT+AGG | - | chr4.3:33857942-33857961 | None:intergenic | 50.0% | |
| GCTACTCGGCCAATGACATT+AGG | - | chr4.3:33853111-33853130 | None:intergenic | 50.0% | |
| GGAAAAATGGTTGCGGTCCA+TGG | + | chr4.3:33857079-33857098 | MS.gene50710:intron | 50.0% | |
| GGAGAATGAGACGTATGACC+TGG | + | chr4.3:33857124-33857143 | MS.gene50710:intron | 50.0% | |
| GGTGCTCTGATACCACTGTT+GGG | - | chr4.3:33854289-33854308 | None:intergenic | 50.0% | |
| GTGCCCTATTCTTCAGCTGT+GGG | + | chr4.3:33857935-33857954 | MS.gene50710:CDS | 50.0% | |
| GTGCTTTGTACCTGGGGTTT+GGG | - | chr4.3:33857220-33857239 | None:intergenic | 50.0% | |
| TCAGGCCCCTCCATTTGATT+GGG | - | chr4.3:33856852-33856871 | None:intergenic | 50.0% | |
| TCGGCTACTCCATTCATCTG+AGG | - | chr4.3:33856360-33856379 | None:intergenic | 50.0% | |
| TCTCAACACTCTGCGTGTTG+AGG | - | chr4.3:33853947-33853966 | None:intergenic | 50.0% | |
| TGCAGACCATGGCGTACATA+AGG | - | chr4.3:33857964-33857983 | None:intergenic | 50.0% | |
| TGCGATGTACTCTGCTTCTG+TGG | - | chr4.3:33858269-33858288 | None:intergenic | 50.0% | |
| TTCAAGAGAGATCAGCAGGC+TGG | + | chr4.3:33855352-33855371 | MS.gene50710:intron | 50.0% | |
| TTCATCTGAGGAGTCTTGGG+GGG | - | chr4.3:33856348-33856367 | None:intergenic | 50.0% | |
| TTGACCCACCTCTCTTACCT+GGG | + | chr4.3:33854496-33854515 | MS.gene50710:intron | 50.0% | |
| TTGGTTCCACTCAGGGTTTG+AGG | - | chr4.3:33853007-33853026 | None:intergenic | 50.0% | |
| ! | ACTAGAGTGTCCCAACTCTC+AGG | - | chr4.3:33855073-33855092 | None:intergenic | 50.0% |
| ! | CAAAGGCCTTTGTTGTCCCT+AGG | - | chr4.3:33852978-33852997 | None:intergenic | 50.0% |
| ! | CACACAAGGTGTTCTTTGCC+TGG | - | chr4.3:33857452-33857471 | None:intergenic | 50.0% |
| ! | CCAGACATCGGTTATGCTGT+AGG | + | chr4.3:33857989-33858008 | MS.gene50710:CDS | 50.0% |
| ! | GCACTCCAGTGTTCTTTTCC+TGG | - | chr4.3:33858040-33858059 | None:intergenic | 50.0% |
| ! | GGAAGCATGATCATTGCTCG+TGG | + | chr4.3:33855790-33855809 | MS.gene50710:CDS | 50.0% |
| !! | TCGGTAGCGGTCTTTTTCTC+GGG | - | chr4.3:33854746-33854765 | None:intergenic | 50.0% |
| !! | TGAGCATTGAACAGGGGCAA+GGG | + | chr4.3:33853556-33853575 | MS.gene50710:CDS | 50.0% |
| !! | TGGCTCTAAGCTCGTGTTGA+AGG | + | chr4.3:33855660-33855679 | MS.gene50710:intron | 50.0% |
| !! | TTGAGCATTGAACAGGGGCA+AGG | + | chr4.3:33853555-33853574 | MS.gene50710:CDS | 50.0% |
| ACCTCAGAGTCCCAGAGCAA+CGG | - | chr4.3:33854311-33854330 | None:intergenic | 55.0% | |
| ATGCCCGTTCTACAGAGGCA+TGG | - | chr4.3:33856224-33856243 | None:intergenic | 55.0% | |
| CCGAATGGGAGACGGAGAAT+CGG | + | chr4.3:33854762-33854781 | MS.gene50710:intron | 55.0% | |
| CCGATTCTCCGTCTCCCATT+CGG | - | chr4.3:33854765-33854784 | None:intergenic | 55.0% | |
| CGTGCTTTGTACCTGGGGTT+TGG | - | chr4.3:33857221-33857240 | None:intergenic | 55.0% | |
| CTATCGGGAGGAACCCTCAT+AGG | - | chr4.3:33853153-33853172 | None:intergenic | 55.0% | |
| GACGGAGAATCGGAAGACAG+TGG | + | chr4.3:33854772-33854791 | MS.gene50710:intron | 55.0% | |
| GATGGTTCGAAGCAGAGACG+TGG | + | chr4.3:33856707-33856726 | MS.gene50710:intron | 55.0% | |
| GCACACGGCAATTGCAGCAA+AGG | + | chr4.3:33853893-33853912 | MS.gene50710:intron | 55.0% | |
| GGGTGCTCTGATACCACTGT+TGG | - | chr4.3:33854290-33854309 | None:intergenic | 55.0% | |
| GGTGCCCTATTCTTCAGCTG+TGG | + | chr4.3:33857934-33857953 | MS.gene50710:CDS | 55.0% | |
| GGTGCTAAAGGACTATCGGG+AGG | - | chr4.3:33853165-33853184 | None:intergenic | 55.0% | |
| GGTGGCCGTGAAAAATCACG+AGG | + | chr4.3:33855253-33855272 | MS.gene50710:intron | 55.0% | |
| GTAAAAACCACGGGACCCGT+AGG | - | chr4.3:33854155-33854174 | None:intergenic | 55.0% | |
| TCCAGATGCCCGTTCTACAG+AGG | - | chr4.3:33856229-33856248 | None:intergenic | 55.0% | |
| TGGCAGCCACCCCAAACTAA+AGG | + | chr4.3:33858584-33858603 | MS.gene50710:CDS | 55.0% | |
| ! | ATCAGAGCACCCGTTGCTCT+GGG | + | chr4.3:33854298-33854317 | MS.gene50710:intron | 55.0% |
| ! | TATCAGAGCACCCGTTGCTC+TGG | + | chr4.3:33854297-33854316 | MS.gene50710:intron | 55.0% |
| !! | CAAGATTGCTGGCATTGGCG+AGG | + | chr4.3:33855618-33855637 | MS.gene50710:intron | 55.0% |
| !! | GGGTAGCCTTATGTACGCCA+TGG | + | chr4.3:33857955-33857974 | MS.gene50710:CDS | 55.0% |
| !! | TGGCATTGGCGAGGTGATTC+TGG | + | chr4.3:33855627-33855646 | MS.gene50710:intron | 55.0% |
| CCTCAGAGTCCCAGAGCAAC+GGG | - | chr4.3:33854310-33854329 | None:intergenic | 60.0% | |
| CCTGTGCATGTTCCGCTACC+TGG | + | chr4.3:33857848-33857867 | MS.gene50710:CDS | 60.0% | |
| CTCCGTCTCCCATTCGGTAG+CGG | - | chr4.3:33854759-33854778 | None:intergenic | 60.0% | |
| GACCGCTACCGAATGGGAGA+CGG | + | chr4.3:33854754-33854773 | MS.gene50710:intron | 60.0% | |
| GCCTCTGTAGAACGGGCATC+TGG | + | chr4.3:33856225-33856244 | MS.gene50710:intron | 60.0% | |
| GGTTGCTACGACTGCTGTCG+TGG | - | chr4.3:33855425-33855444 | None:intergenic | 60.0% | |
| GTCTGCACGAGGCCAGACAT+CGG | + | chr4.3:33857977-33857996 | MS.gene50710:CDS | 60.0% | |
| TGTACGCCATGGTCTGCACG+AGG | + | chr4.3:33857966-33857985 | MS.gene50710:CDS | 60.0% | |
| TTGCAGGGGGAGCTGTCTCA+TGG | + | chr4.3:33858209-33858228 | MS.gene50710:intron | 60.0% | |
| !! | CCAGGTAGCGGAACATGCAC+AGG | - | chr4.3:33857851-33857870 | None:intergenic | 60.0% |
| GTCTGGCCTCGTGCAGACCA+TGG | - | chr4.3:33857975-33857994 | None:intergenic | 65.0% | |
| TAAGAGGCCTACGGGTCCCG+TGG | + | chr4.3:33854145-33854164 | MS.gene50710:intron | 65.0% | |
| !! | CCCGTTGCTCTGGGACTCTG+AGG | + | chr4.3:33854307-33854326 | MS.gene50710:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 33852730 | 33858603 | 33852730 | ID=MS.gene50710 |
| chr4.3 | mRNA | 33852730 | 33858603 | 33852730 | ID=MS.gene50710.t1;Parent=MS.gene50710 |
| chr4.3 | exon | 33852730 | 33853702 | 33852730 | ID=MS.gene50710.t1.exon1;Parent=MS.gene50710.t1 |
| chr4.3 | CDS | 33852730 | 33853702 | 33852730 | ID=cds.MS.gene50710.t1;Parent=MS.gene50710.t1 |
| chr4.3 | exon | 33855728 | 33855973 | 33855728 | ID=MS.gene50710.t1.exon2;Parent=MS.gene50710.t1 |
| chr4.3 | CDS | 33855728 | 33855973 | 33855728 | ID=cds.MS.gene50710.t1;Parent=MS.gene50710.t1 |
| chr4.3 | exon | 33856952 | 33857093 | 33856952 | ID=MS.gene50710.t1.exon3;Parent=MS.gene50710.t1 |
| chr4.3 | CDS | 33856952 | 33857093 | 33856952 | ID=cds.MS.gene50710.t1;Parent=MS.gene50710.t1 |
| chr4.3 | exon | 33857778 | 33858015 | 33857778 | ID=MS.gene50710.t1.exon4;Parent=MS.gene50710.t1 |
| chr4.3 | CDS | 33857778 | 33858015 | 33857778 | ID=cds.MS.gene50710.t1;Parent=MS.gene50710.t1 |
| chr4.3 | exon | 33858475 | 33858603 | 33858475 | ID=MS.gene50710.t1.exon5;Parent=MS.gene50710.t1 |
| chr4.3 | CDS | 33858475 | 33858603 | 33858475 | ID=cds.MS.gene50710.t1;Parent=MS.gene50710.t1 |
| Gene Sequence |
| Protein sequence |
