Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50887.t1 | RHN66012.1 | 94.6 | 483 | 25 | 1 | 15 | 497 | 662 | 1143 | 3.00E-275 | 957.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50887.t1 | Q9LRR4 | 38.0 | 229 | 124 | 4 | 23 | 234 | 686 | 913 | 2.7e-35 | 151.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50887.t1 | A0A396IKD2 | 94.6 | 483 | 25 | 1 | 15 | 497 | 662 | 1143 | 2.1e-275 | 957.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057935 | MS.gene50887 | 0.961109 | 2.54E-119 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50887.t1 | MTR_3g027250 | 72.008 | 493 | 136 | 2 | 1 | 492 | 649 | 1140 | 0.0 | 700 |
| MS.gene50887.t1 | MTR_3g024460 | 72.967 | 492 | 129 | 3 | 1 | 491 | 268 | 756 | 0.0 | 698 |
| MS.gene50887.t1 | MTR_3g023030 | 69.277 | 498 | 149 | 2 | 1 | 494 | 662 | 1159 | 0.0 | 684 |
| MS.gene50887.t1 | MTR_3g023030 | 69.277 | 498 | 149 | 2 | 1 | 494 | 628 | 1125 | 0.0 | 683 |
| MS.gene50887.t1 | MTR_3g027420 | 66.600 | 497 | 162 | 3 | 1 | 497 | 652 | 1144 | 0.0 | 639 |
| MS.gene50887.t1 | MTR_7g021000 | 63.747 | 491 | 155 | 1 | 1 | 491 | 659 | 1126 | 0.0 | 608 |
| MS.gene50887.t1 | MTR_3g022060 | 64.444 | 495 | 170 | 5 | 1 | 491 | 549 | 1041 | 0.0 | 594 |
| MS.gene50887.t1 | MTR_3g027200 | 65.923 | 493 | 161 | 4 | 1 | 490 | 667 | 1155 | 0.0 | 593 |
| MS.gene50887.t1 | MTR_3g022130 | 67.615 | 457 | 144 | 3 | 1 | 454 | 636 | 1091 | 0.0 | 562 |
| MS.gene50887.t1 | MTR_3g019040 | 58.788 | 495 | 192 | 5 | 1 | 491 | 663 | 1149 | 0.0 | 542 |
| MS.gene50887.t1 | MTR_3g022400 | 56.768 | 495 | 209 | 3 | 1 | 491 | 645 | 1138 | 0.0 | 539 |
| MS.gene50887.t1 | MTR_3g022940 | 56.970 | 495 | 208 | 4 | 1 | 491 | 648 | 1141 | 1.04e-179 | 535 |
| MS.gene50887.t1 | MTR_3g022920 | 57.980 | 495 | 203 | 4 | 1 | 491 | 641 | 1134 | 3.16e-179 | 533 |
| MS.gene50887.t1 | MTR_3g022870 | 56.566 | 495 | 210 | 4 | 1 | 491 | 612 | 1105 | 9.76e-179 | 531 |
| MS.gene50887.t1 | MTR_3g022870 | 56.566 | 495 | 210 | 4 | 1 | 491 | 648 | 1141 | 2.45e-178 | 531 |
| MS.gene50887.t1 | MTR_3g022570 | 55.758 | 495 | 214 | 3 | 1 | 491 | 686 | 1179 | 3.70e-177 | 529 |
| MS.gene50887.t1 | MTR_3g018930 | 57.285 | 501 | 192 | 7 | 1 | 491 | 665 | 1153 | 4.69e-175 | 523 |
| MS.gene50887.t1 | MTR_3g019000 | 55.781 | 493 | 213 | 4 | 1 | 491 | 661 | 1150 | 2.96e-173 | 518 |
| MS.gene50887.t1 | MTR_3g021100 | 54.949 | 495 | 218 | 4 | 1 | 491 | 656 | 1149 | 5.22e-171 | 513 |
| MS.gene50887.t1 | MTR_3g022300 | 52.196 | 592 | 148 | 8 | 1 | 497 | 672 | 1223 | 6.10e-171 | 514 |
| MS.gene50887.t1 | MTR_3g021340 | 54.343 | 495 | 213 | 5 | 1 | 491 | 650 | 1135 | 6.72e-169 | 506 |
| MS.gene50887.t1 | MTR_3g021380 | 54.728 | 497 | 216 | 6 | 1 | 491 | 638 | 1131 | 2.22e-168 | 505 |
| MS.gene50887.t1 | MTR_3g018980 | 55.332 | 497 | 206 | 6 | 1 | 493 | 663 | 1147 | 7.51e-166 | 499 |
| MS.gene50887.t1 | MTR_3g027470 | 55.263 | 494 | 155 | 7 | 1 | 491 | 567 | 997 | 3.13e-165 | 493 |
| MS.gene50887.t1 | MTR_3g022400 | 52.525 | 495 | 202 | 4 | 1 | 491 | 645 | 1110 | 5.45e-160 | 483 |
| MS.gene50887.t1 | MTR_3g021400 | 52.621 | 496 | 229 | 5 | 1 | 491 | 640 | 1134 | 2.35e-158 | 479 |
| MS.gene50887.t1 | MTR_3g021170 | 51.911 | 497 | 228 | 7 | 1 | 491 | 651 | 1142 | 9.13e-157 | 475 |
| MS.gene50887.t1 | MTR_0425s0020 | 65.879 | 381 | 119 | 3 | 118 | 497 | 886 | 1256 | 1.36e-150 | 462 |
| MS.gene50887.t1 | MTR_3g015260 | 52.130 | 493 | 190 | 5 | 1 | 491 | 664 | 1112 | 1.65e-150 | 458 |
| MS.gene50887.t1 | MTR_3g022600 | 65.445 | 382 | 123 | 4 | 118 | 497 | 892 | 1266 | 1.38e-147 | 454 |
| MS.gene50887.t1 | MTR_3g022600 | 40.509 | 511 | 224 | 19 | 1 | 476 | 679 | 1144 | 9.52e-78 | 265 |
| MS.gene50887.t1 | MTR_3g025360 | 54.005 | 437 | 196 | 4 | 1 | 433 | 677 | 1112 | 2.32e-144 | 442 |
| MS.gene50887.t1 | MTR_3g022230 | 66.578 | 377 | 114 | 4 | 118 | 492 | 1231 | 1597 | 4.58e-143 | 448 |
| MS.gene50887.t1 | MTR_3g022230 | 43.802 | 484 | 216 | 22 | 1 | 465 | 662 | 1108 | 1.07e-75 | 259 |
| MS.gene50887.t1 | MTR_3g022230 | 35.180 | 361 | 188 | 16 | 118 | 465 | 1006 | 1333 | 1.31e-25 | 111 |
| MS.gene50887.t1 | MTR_3g022230 | 32.843 | 408 | 202 | 18 | 118 | 476 | 1096 | 1480 | 1.74e-25 | 111 |
| MS.gene50887.t1 | MTR_1643s0010 | 72.917 | 288 | 69 | 2 | 1 | 288 | 1 | 279 | 2.76e-140 | 407 |
| MS.gene50887.t1 | MTR_3g022590 | 63.506 | 348 | 117 | 4 | 145 | 484 | 99 | 444 | 9.02e-140 | 410 |
| MS.gene50887.t1 | MTR_3g022590 | 32.360 | 411 | 215 | 17 | 1 | 367 | 35 | 426 | 2.63e-30 | 123 |
| MS.gene50887.t1 | MTR_3g022730 | 72.242 | 281 | 75 | 2 | 188 | 466 | 3 | 282 | 6.31e-125 | 372 |
| MS.gene50887.t1 | MTR_3g022730 | 49.355 | 310 | 124 | 5 | 196 | 494 | 146 | 433 | 4.45e-75 | 243 |
| MS.gene50887.t1 | MTR_3g022790 | 62.465 | 357 | 112 | 5 | 114 | 460 | 993 | 1337 | 1.09e-123 | 392 |
| MS.gene50887.t1 | MTR_3g022790 | 50.837 | 478 | 195 | 14 | 1 | 465 | 658 | 1108 | 9.75e-113 | 363 |
| MS.gene50887.t1 | MTR_3g022790 | 33.890 | 419 | 203 | 19 | 118 | 484 | 870 | 1266 | 7.74e-34 | 136 |
| MS.gene50887.t1 | MTR_3g022240 | 54.762 | 378 | 110 | 6 | 5 | 332 | 1 | 367 | 1.54e-120 | 358 |
| MS.gene50887.t1 | MTR_3g018970 | 45.825 | 491 | 175 | 10 | 1 | 491 | 116 | 515 | 1.55e-118 | 358 |
| MS.gene50887.t1 | MTR_3g022740 | 61.963 | 326 | 52 | 6 | 1 | 280 | 384 | 683 | 4.40e-115 | 356 |
| MS.gene50887.t1 | MTR_3g015260 | 55.710 | 359 | 146 | 6 | 1 | 356 | 664 | 1012 | 6.25e-115 | 362 |
| MS.gene50887.t1 | MTR_3g035810 | 52.960 | 321 | 146 | 4 | 1 | 317 | 632 | 951 | 1.22e-97 | 316 |
| MS.gene50887.t1 | MTR_2053s0010 | 95.918 | 147 | 6 | 0 | 351 | 497 | 1 | 147 | 3.71e-96 | 287 |
| MS.gene50887.t1 | MTR_3g021330 | 44.414 | 367 | 165 | 7 | 1 | 367 | 243 | 570 | 2.15e-83 | 270 |
| MS.gene50887.t1 | MTR_3g021330 | 36.304 | 303 | 135 | 6 | 241 | 491 | 299 | 595 | 1.60e-41 | 157 |
| MS.gene50887.t1 | MTR_7g021000 | 70.681 | 191 | 56 | 0 | 1 | 191 | 659 | 849 | 1.23e-82 | 273 |
| MS.gene50887.t1 | MTR_3g018980 | 50.847 | 295 | 132 | 4 | 1 | 293 | 663 | 946 | 3.52e-81 | 271 |
| MS.gene50887.t1 | MTR_8g038590 | 35.060 | 579 | 274 | 16 | 1 | 491 | 674 | 1238 | 1.18e-78 | 267 |
| MS.gene50887.t1 | MTR_2g038760 | 34.370 | 579 | 282 | 16 | 1 | 492 | 680 | 1247 | 2.08e-73 | 253 |
| MS.gene50887.t1 | MTR_2g038930 | 34.722 | 576 | 284 | 16 | 1 | 492 | 506 | 1073 | 6.39e-73 | 250 |
| MS.gene50887.t1 | MTR_0137s0070 | 33.622 | 577 | 294 | 13 | 1 | 492 | 88 | 660 | 1.30e-72 | 243 |
| MS.gene50887.t1 | MTR_2g038900 | 34.896 | 576 | 283 | 16 | 1 | 492 | 669 | 1236 | 1.88e-72 | 249 |
| MS.gene50887.t1 | MTR_0137s0070 | 34.862 | 545 | 295 | 15 | 1 | 492 | 88 | 625 | 1.56e-71 | 239 |
| MS.gene50887.t1 | MTR_3g033860 | 31.864 | 590 | 300 | 14 | 1 | 492 | 662 | 1247 | 1.22e-70 | 244 |
| MS.gene50887.t1 | MTR_3g014080 | 33.622 | 577 | 294 | 13 | 1 | 492 | 670 | 1242 | 3.91e-70 | 243 |
| MS.gene50887.t1 | MTR_3g020890 | 31.000 | 600 | 297 | 12 | 1 | 492 | 653 | 1243 | 1.62e-69 | 241 |
| MS.gene50887.t1 | MTR_3g014080 | 34.307 | 548 | 294 | 15 | 1 | 492 | 670 | 1207 | 6.26e-69 | 239 |
| MS.gene50887.t1 | MTR_8g038570 | 34.380 | 573 | 284 | 16 | 1 | 492 | 679 | 1240 | 2.50e-67 | 235 |
| MS.gene50887.t1 | MTR_3g011620 | 32.155 | 566 | 307 | 12 | 1 | 493 | 667 | 1228 | 3.01e-67 | 234 |
| MS.gene50887.t1 | MTR_8g446950 | 33.217 | 575 | 297 | 14 | 1 | 492 | 686 | 1256 | 2.88e-65 | 229 |
| MS.gene50887.t1 | MTR_0002s0110 | 32.088 | 589 | 294 | 19 | 1 | 493 | 663 | 1241 | 3.06e-65 | 229 |
| MS.gene50887.t1 | MTR_3g023020 | 71.622 | 148 | 41 | 1 | 351 | 497 | 1 | 148 | 3.19e-65 | 207 |
| MS.gene50887.t1 | MTR_4g019360 | 32.316 | 557 | 305 | 12 | 1 | 487 | 585 | 1139 | 1.77e-64 | 227 |
| MS.gene50887.t1 | MTR_3g435220 | 32.931 | 580 | 292 | 15 | 1 | 492 | 621 | 1191 | 1.09e-63 | 224 |
| MS.gene50887.t1 | MTR_3g035480 | 31.826 | 575 | 290 | 17 | 1 | 479 | 663 | 1231 | 5.12e-63 | 223 |
| MS.gene50887.t1 | MTR_1g045960 | 32.750 | 571 | 301 | 15 | 1 | 492 | 631 | 1197 | 2.07e-62 | 221 |
| MS.gene50887.t1 | MTR_0603s0010 | 31.892 | 555 | 296 | 14 | 1 | 480 | 723 | 1270 | 6.32e-62 | 219 |
| MS.gene50887.t1 | MTR_0005s0200 | 32.892 | 529 | 266 | 12 | 1 | 492 | 678 | 1154 | 6.60e-62 | 219 |
| MS.gene50887.t1 | MTR_3g028040 | 31.197 | 593 | 302 | 15 | 1 | 493 | 662 | 1248 | 7.87e-62 | 219 |
| MS.gene50887.t1 | MTR_5g037590 | 31.794 | 563 | 309 | 12 | 1 | 492 | 623 | 1181 | 1.23e-60 | 216 |
| MS.gene50887.t1 | MTR_3g032340 | 31.507 | 584 | 300 | 15 | 1 | 492 | 713 | 1288 | 5.09e-60 | 214 |
| MS.gene50887.t1 | MTR_3g071070 | 32.871 | 505 | 287 | 15 | 1 | 493 | 441 | 905 | 1.17e-59 | 211 |
| MS.gene50887.t1 | MTR_3g007190 | 32.369 | 553 | 311 | 14 | 1 | 492 | 514 | 1064 | 1.56e-59 | 212 |
| MS.gene50887.t1 | MTR_3g071130 | 32.941 | 510 | 280 | 15 | 1 | 493 | 646 | 1110 | 9.39e-59 | 210 |
| MS.gene50887.t1 | MTR_2g014840 | 30.318 | 597 | 305 | 16 | 1 | 493 | 658 | 1247 | 1.33e-58 | 209 |
| MS.gene50887.t1 | MTR_5g095910 | 29.264 | 598 | 298 | 15 | 1 | 493 | 662 | 1239 | 1.86e-58 | 209 |
| MS.gene50887.t1 | MTR_4g050410 | 31.097 | 611 | 295 | 19 | 1 | 492 | 660 | 1263 | 5.96e-58 | 208 |
| MS.gene50887.t1 | MTR_2g039090 | 34.578 | 509 | 281 | 17 | 1 | 469 | 653 | 1149 | 1.95e-57 | 206 |
| MS.gene50887.t1 | MTR_2g039090 | 37.714 | 175 | 105 | 3 | 324 | 496 | 1053 | 1225 | 1.04e-24 | 108 |
| MS.gene50887.t1 | MTR_3g014040 | 32.616 | 558 | 309 | 11 | 1 | 492 | 655 | 1211 | 2.80e-57 | 206 |
| MS.gene50887.t1 | MTR_3g034380 | 30.756 | 595 | 302 | 17 | 1 | 493 | 661 | 1247 | 3.34e-57 | 206 |
| MS.gene50887.t1 | MTR_0137s0010 | 34.405 | 529 | 306 | 13 | 1 | 492 | 209 | 733 | 3.78e-57 | 202 |
| MS.gene50887.t1 | MTR_3g031940 | 29.853 | 613 | 300 | 18 | 1 | 492 | 665 | 1268 | 7.22e-57 | 204 |
| MS.gene50887.t1 | MTR_3g032800 | 30.626 | 591 | 301 | 18 | 1 | 492 | 662 | 1242 | 1.01e-56 | 204 |
| MS.gene50887.t1 | MTR_2g063777 | 29.016 | 610 | 306 | 16 | 2 | 492 | 660 | 1261 | 3.06e-56 | 203 |
| MS.gene50887.t1 | MTR_3g032110 | 31.164 | 584 | 300 | 16 | 1 | 492 | 710 | 1283 | 5.66e-56 | 202 |
| MS.gene50887.t1 | MTR_3g033110 | 29.479 | 614 | 303 | 17 | 1 | 492 | 638 | 1243 | 6.27e-56 | 202 |
| MS.gene50887.t1 | MTR_3g034460 | 31.359 | 574 | 306 | 16 | 1 | 492 | 646 | 1213 | 9.15e-56 | 201 |
| MS.gene50887.t1 | MTR_1g047800 | 37.173 | 382 | 211 | 9 | 1 | 371 | 654 | 1017 | 1.39e-55 | 201 |
| MS.gene50887.t1 | MTR_1g008240 | 30.536 | 560 | 290 | 16 | 1 | 470 | 647 | 1197 | 9.92e-55 | 198 |
| MS.gene50887.t1 | MTR_3g033240 | 31.791 | 497 | 302 | 14 | 1 | 465 | 665 | 1156 | 1.41e-54 | 198 |
| MS.gene50887.t1 | MTR_3g033240 | 37.589 | 141 | 77 | 6 | 354 | 492 | 1096 | 1227 | 2.09e-12 | 70.5 |
| MS.gene50887.t1 | MTR_3g032200 | 30.229 | 612 | 299 | 18 | 1 | 493 | 665 | 1267 | 2.36e-54 | 197 |
| MS.gene50887.t1 | MTR_3g030980 | 29.537 | 562 | 292 | 13 | 1 | 465 | 662 | 1216 | 1.03e-53 | 195 |
| MS.gene50887.t1 | MTR_3g030980 | 26.330 | 376 | 212 | 16 | 138 | 492 | 979 | 1310 | 8.46e-12 | 68.6 |
| MS.gene50887.t1 | MTR_3g014510 | 28.287 | 654 | 305 | 16 | 1 | 493 | 665 | 1315 | 1.03e-53 | 195 |
| MS.gene50887.t1 | MTR_3g035940 | 33.888 | 481 | 255 | 19 | 1 | 466 | 663 | 1095 | 6.54e-53 | 193 |
| MS.gene50887.t1 | MTR_3g035940 | 26.844 | 488 | 289 | 25 | 40 | 492 | 786 | 1240 | 3.73e-16 | 82.4 |
| MS.gene50887.t1 | MTR_0002s0090 | 29.983 | 597 | 293 | 21 | 1 | 492 | 663 | 1239 | 7.25e-53 | 193 |
| MS.gene50887.t1 | MTR_3g035500 | 29.983 | 597 | 293 | 21 | 1 | 492 | 663 | 1239 | 7.25e-53 | 193 |
| MS.gene50887.t1 | MTR_3g435720 | 30.244 | 615 | 294 | 22 | 1 | 492 | 662 | 1264 | 1.29e-51 | 189 |
| MS.gene50887.t1 | MTR_3g034430 | 33.753 | 477 | 250 | 17 | 1 | 461 | 662 | 1088 | 1.81e-51 | 189 |
| MS.gene50887.t1 | MTR_3g034430 | 32.836 | 201 | 100 | 5 | 324 | 493 | 1076 | 1272 | 7.18e-16 | 81.3 |
| MS.gene50887.t1 | MTR_3g030960 | 29.902 | 612 | 299 | 19 | 1 | 492 | 662 | 1263 | 3.00e-51 | 188 |
| MS.gene50887.t1 | MTR_3g022260 | 62.346 | 162 | 41 | 4 | 332 | 489 | 4 | 149 | 3.26e-51 | 171 |
| MS.gene50887.t1 | MTR_3g032500 | 28.739 | 595 | 298 | 14 | 1 | 475 | 666 | 1254 | 1.41e-50 | 186 |
| MS.gene50887.t1 | MTR_0002s0120 | 34.752 | 423 | 218 | 15 | 1 | 412 | 446 | 821 | 2.42e-50 | 184 |
| MS.gene50887.t1 | MTR_3g020620 | 36.695 | 357 | 203 | 8 | 1 | 347 | 811 | 1154 | 4.39e-50 | 184 |
| MS.gene50887.t1 | MTR_3g032760 | 29.064 | 609 | 306 | 17 | 2 | 492 | 663 | 1263 | 1.02e-49 | 184 |
| MS.gene50887.t1 | MTR_3g032960 | 27.124 | 612 | 318 | 14 | 1 | 492 | 662 | 1265 | 1.57e-49 | 183 |
| MS.gene50887.t1 | MTR_3g435740 | 30.081 | 615 | 295 | 22 | 1 | 492 | 706 | 1308 | 3.76e-49 | 182 |
| MS.gene50887.t1 | MTR_3g032150 | 31.384 | 513 | 293 | 14 | 1 | 465 | 660 | 1161 | 1.13e-48 | 181 |
| MS.gene50887.t1 | MTR_8g030860 | 29.856 | 556 | 288 | 15 | 1 | 461 | 668 | 1216 | 1.23e-47 | 177 |
| MS.gene50887.t1 | MTR_3g035960 | 33.256 | 433 | 233 | 14 | 1 | 420 | 661 | 1050 | 1.66e-47 | 177 |
| MS.gene50887.t1 | MTR_3g035960 | 30.460 | 174 | 112 | 5 | 324 | 493 | 1079 | 1247 | 9.10e-14 | 74.7 |
| MS.gene50887.t1 | MTR_3g036050 | 34.940 | 415 | 223 | 17 | 1 | 392 | 273 | 663 | 1.94e-47 | 177 |
| MS.gene50887.t1 | MTR_3g022810 | 47.222 | 216 | 84 | 3 | 136 | 349 | 98 | 285 | 5.85e-47 | 166 |
| MS.gene50887.t1 | MTR_3g032370 | 28.774 | 563 | 294 | 15 | 1 | 465 | 660 | 1213 | 3.31e-45 | 170 |
| MS.gene50887.t1 | MTR_3g032370 | 27.390 | 387 | 200 | 17 | 121 | 492 | 1010 | 1330 | 5.89e-14 | 75.5 |
| MS.gene50887.t1 | MTR_3g033130 | 27.830 | 636 | 275 | 20 | 4 | 496 | 640 | 1234 | 3.55e-45 | 170 |
| MS.gene50887.t1 | MTR_3g033380 | 29.027 | 627 | 289 | 22 | 1 | 492 | 666 | 1271 | 6.24e-45 | 169 |
| MS.gene50887.t1 | MTR_3g070590 | 30.059 | 509 | 252 | 16 | 1 | 492 | 646 | 1067 | 1.51e-44 | 168 |
| MS.gene50887.t1 | MTR_3g014390 | 31.315 | 479 | 255 | 12 | 1 | 463 | 662 | 1082 | 2.06e-44 | 168 |
| MS.gene50887.t1 | MTR_3g014390 | 27.365 | 296 | 195 | 8 | 196 | 483 | 1025 | 1308 | 4.13e-15 | 79.0 |
| MS.gene50887.t1 | MTR_7g078790 | 40.329 | 243 | 132 | 6 | 1 | 233 | 649 | 888 | 1.03e-43 | 166 |
| MS.gene50887.t1 | MTR_3g035815 | 59.016 | 122 | 50 | 0 | 370 | 491 | 1 | 122 | 1.90e-43 | 150 |
| MS.gene50887.t1 | MTR_3g033080 | 40.726 | 248 | 134 | 5 | 1 | 238 | 665 | 909 | 3.56e-43 | 164 |
| MS.gene50887.t1 | MTR_3g034650 | 28.596 | 584 | 290 | 22 | 1 | 486 | 186 | 740 | 2.46e-42 | 161 |
| MS.gene50887.t1 | MTR_2g014730 | 28.330 | 533 | 269 | 15 | 1 | 465 | 609 | 1096 | 2.15e-41 | 159 |
| MS.gene50887.t1 | MTR_1g037610 | 30.435 | 460 | 279 | 10 | 1 | 441 | 665 | 1102 | 2.53e-41 | 159 |
| MS.gene50887.t1 | MTR_1g037610 | 26.964 | 471 | 238 | 15 | 115 | 481 | 870 | 1338 | 7.55e-24 | 106 |
| MS.gene50887.t1 | MTR_3g014360 | 25.772 | 648 | 315 | 21 | 1 | 492 | 649 | 1286 | 7.01e-41 | 157 |
| MS.gene50887.t1 | MTR_6g046620 | 31.151 | 504 | 270 | 22 | 2 | 492 | 588 | 1027 | 1.77e-40 | 156 |
| MS.gene50887.t1 | MTR_6g046130 | 32.200 | 500 | 266 | 20 | 2 | 489 | 634 | 1072 | 3.20e-40 | 155 |
| MS.gene50887.t1 | MTR_2g014720 | 28.696 | 460 | 217 | 10 | 1 | 450 | 564 | 922 | 6.15e-40 | 154 |
| MS.gene50887.t1 | MTR_8g106550 | 29.755 | 531 | 274 | 18 | 2 | 477 | 599 | 1085 | 1.63e-39 | 153 |
| MS.gene50887.t1 | MTR_6g046930 | 30.020 | 493 | 301 | 15 | 2 | 487 | 633 | 1088 | 5.27e-39 | 152 |
| MS.gene50887.t1 | MTR_6g046440 | 29.537 | 518 | 278 | 20 | 2 | 492 | 579 | 1036 | 1.14e-38 | 150 |
| MS.gene50887.t1 | MTR_3g014320 | 30.720 | 472 | 274 | 12 | 1 | 464 | 664 | 1090 | 1.58e-38 | 150 |
| MS.gene50887.t1 | MTR_3g014320 | 26.033 | 484 | 248 | 15 | 115 | 492 | 858 | 1337 | 9.75e-30 | 124 |
| MS.gene50887.t1 | MTR_6g047450 | 29.842 | 506 | 300 | 20 | 2 | 492 | 636 | 1101 | 3.22e-38 | 149 |
| MS.gene50887.t1 | MTR_6g046480 | 30.522 | 498 | 274 | 19 | 2 | 487 | 637 | 1074 | 4.36e-38 | 149 |
| MS.gene50887.t1 | MTR_5g035530 | 29.666 | 509 | 283 | 16 | 1 | 495 | 532 | 979 | 3.09e-37 | 146 |
| MS.gene50887.t1 | MTR_6g084550 | 40.611 | 229 | 122 | 6 | 1 | 219 | 647 | 871 | 5.85e-37 | 145 |
| MS.gene50887.t1 | MTR_3g071080 | 34.405 | 311 | 188 | 9 | 193 | 492 | 108 | 413 | 1.32e-36 | 140 |
| MS.gene50887.t1 | MTR_3g071040 | 34.405 | 311 | 188 | 9 | 193 | 492 | 108 | 413 | 1.32e-36 | 140 |
| MS.gene50887.t1 | MTR_3g071010 | 33.233 | 331 | 204 | 10 | 173 | 492 | 98 | 422 | 1.73e-36 | 140 |
| MS.gene50887.t1 | MTR_0256s0050 | 27.938 | 519 | 285 | 19 | 2 | 492 | 605 | 1062 | 2.71e-36 | 144 |
| MS.gene50887.t1 | MTR_3g018930 | 58.779 | 131 | 50 | 1 | 1 | 127 | 665 | 795 | 2.93e-36 | 143 |
| MS.gene50887.t1 | MTR_3g086070 | 28.994 | 507 | 302 | 17 | 2 | 496 | 635 | 1095 | 6.80e-36 | 142 |
| MS.gene50887.t1 | MTR_8g039260 | 34.174 | 357 | 163 | 13 | 2 | 347 | 207 | 502 | 1.32e-35 | 140 |
| MS.gene50887.t1 | MTR_2g060700 | 38.912 | 239 | 116 | 7 | 1 | 233 | 423 | 637 | 7.98e-35 | 139 |
| MS.gene50887.t1 | MTR_0133s0020 | 29.644 | 506 | 277 | 19 | 2 | 487 | 643 | 1089 | 1.00e-34 | 139 |
| MS.gene50887.t1 | MTR_0267s0070 | 41.339 | 254 | 139 | 5 | 1 | 245 | 670 | 922 | 1.08e-34 | 139 |
| MS.gene50887.t1 | MTR_0083s0120 | 27.170 | 530 | 297 | 12 | 1 | 465 | 211 | 716 | 2.33e-34 | 137 |
| MS.gene50887.t1 | MTR_3g070650 | 33.981 | 309 | 188 | 9 | 195 | 492 | 191 | 494 | 4.32e-34 | 134 |
| MS.gene50887.t1 | MTR_0511s0020 | 29.825 | 513 | 282 | 20 | 1 | 494 | 621 | 1074 | 3.35e-33 | 134 |
| MS.gene50887.t1 | MTR_3g436130 | 41.566 | 166 | 92 | 3 | 1 | 165 | 28 | 189 | 6.10e-33 | 124 |
| MS.gene50887.t1 | MTR_5g037450 | 30.545 | 514 | 265 | 22 | 1 | 492 | 657 | 1100 | 7.08e-33 | 133 |
| MS.gene50887.t1 | MTR_6g052760 | 28.685 | 502 | 298 | 19 | 1 | 491 | 639 | 1091 | 1.85e-32 | 132 |
| MS.gene50887.t1 | MTR_0144s0060 | 31.304 | 460 | 254 | 17 | 2 | 420 | 634 | 1072 | 3.53e-32 | 131 |
| MS.gene50887.t1 | MTR_3g026660 | 29.842 | 506 | 278 | 18 | 2 | 491 | 692 | 1136 | 4.22e-32 | 131 |
| MS.gene50887.t1 | MTR_6g052455 | 29.307 | 505 | 296 | 19 | 1 | 494 | 529 | 983 | 4.87e-32 | 131 |
| MS.gene50887.t1 | MTR_3g026660 | 29.842 | 506 | 278 | 18 | 2 | 491 | 635 | 1079 | 5.17e-32 | 130 |
| MS.gene50887.t1 | MTR_3g023320 | 27.746 | 519 | 290 | 18 | 2 | 492 | 638 | 1099 | 6.22e-32 | 130 |
| MS.gene50887.t1 | MTR_3g435210 | 26.931 | 479 | 223 | 11 | 1 | 377 | 469 | 922 | 6.38e-32 | 130 |
| MS.gene50887.t1 | MTR_1g078450 | 46.043 | 139 | 71 | 2 | 1 | 135 | 1 | 139 | 7.49e-32 | 123 |
| MS.gene50887.t1 | MTR_0133s0030 | 28.937 | 508 | 296 | 19 | 2 | 492 | 635 | 1094 | 3.17e-31 | 128 |
| MS.gene50887.t1 | MTR_5g072340 | 33.426 | 359 | 192 | 11 | 1 | 347 | 644 | 967 | 3.79e-31 | 128 |
| MS.gene50887.t1 | MTR_8g036195 | 29.207 | 517 | 284 | 16 | 2 | 492 | 620 | 1080 | 9.13e-30 | 124 |
| MS.gene50887.t1 | MTR_5g035280 | 28.685 | 502 | 281 | 19 | 1 | 486 | 647 | 1087 | 3.16e-29 | 122 |
| MS.gene50887.t1 | MTR_7g071940 | 37.795 | 254 | 145 | 7 | 1 | 248 | 634 | 880 | 8.05e-29 | 121 |
| MS.gene50887.t1 | MTR_4g126000 | 31.831 | 355 | 219 | 12 | 5 | 347 | 510 | 853 | 1.13e-28 | 120 |
| MS.gene50887.t1 | MTR_5g072140 | 38.034 | 234 | 134 | 5 | 1 | 231 | 602 | 827 | 1.99e-28 | 120 |
| MS.gene50887.t1 | MTR_5g071670 | 33.807 | 352 | 200 | 11 | 1 | 347 | 635 | 958 | 2.15e-28 | 120 |
| MS.gene50887.t1 | MTR_5g071670 | 35.220 | 159 | 99 | 3 | 22 | 179 | 1130 | 1285 | 2.14e-13 | 73.6 |
| MS.gene50887.t1 | MTR_4g055630 | 33.333 | 390 | 236 | 12 | 1 | 375 | 645 | 1025 | 2.54e-28 | 119 |
| MS.gene50887.t1 | MTR_1g023600 | 38.272 | 243 | 136 | 8 | 1 | 237 | 639 | 873 | 3.19e-28 | 119 |
| MS.gene50887.t1 | MTR_5g071220 | 39.485 | 233 | 128 | 7 | 5 | 231 | 646 | 871 | 6.43e-28 | 118 |
| MS.gene50887.t1 | MTR_5g071220 | 39.485 | 233 | 128 | 7 | 5 | 231 | 646 | 871 | 7.07e-28 | 118 |
| MS.gene50887.t1 | MTR_6g046750 | 27.536 | 483 | 296 | 19 | 15 | 491 | 4 | 438 | 7.81e-28 | 116 |
| MS.gene50887.t1 | MTR_5g071310 | 33.051 | 354 | 200 | 12 | 1 | 347 | 609 | 932 | 1.79e-27 | 117 |
| MS.gene50887.t1 | MTR_5g071570 | 37.008 | 254 | 147 | 7 | 1 | 248 | 643 | 889 | 6.65e-27 | 115 |
| MS.gene50887.t1 | MTR_5g028340 | 28.000 | 525 | 273 | 21 | 1 | 496 | 636 | 1084 | 6.70e-27 | 115 |
| MS.gene50887.t1 | MTR_0230s0010 | 34.632 | 231 | 142 | 6 | 1 | 227 | 580 | 805 | 7.62e-27 | 115 |
| MS.gene50887.t1 | MTR_5g028070 | 27.256 | 543 | 259 | 19 | 1 | 491 | 777 | 1235 | 1.04e-26 | 115 |
| MS.gene50887.t1 | MTR_5g028750 | 27.273 | 506 | 297 | 17 | 1 | 489 | 620 | 1071 | 1.05e-26 | 115 |
| MS.gene50887.t1 | MTR_3g014470 | 41.176 | 187 | 104 | 4 | 1 | 184 | 615 | 798 | 1.44e-26 | 114 |
| MS.gene50887.t1 | MTR_5g071800 | 32.447 | 376 | 218 | 12 | 1 | 369 | 642 | 988 | 2.77e-26 | 113 |
| MS.gene50887.t1 | MTR_1g022380 | 36.538 | 260 | 151 | 8 | 1 | 254 | 637 | 888 | 5.20e-26 | 112 |
| MS.gene50887.t1 | MTR_5g071823 | 32.584 | 356 | 215 | 13 | 5 | 346 | 645 | 989 | 5.35e-26 | 112 |
| MS.gene50887.t1 | MTR_5g071850 | 32.584 | 356 | 215 | 13 | 5 | 346 | 645 | 989 | 5.35e-26 | 112 |
| MS.gene50887.t1 | MTR_6g046570 | 28.277 | 534 | 245 | 22 | 1 | 492 | 641 | 1078 | 1.73e-25 | 111 |
| MS.gene50887.t1 | MTR_5g070490 | 37.179 | 234 | 135 | 6 | 1 | 231 | 639 | 863 | 1.82e-25 | 111 |
| MS.gene50887.t1 | MTR_5g071780 | 33.333 | 354 | 216 | 12 | 5 | 347 | 645 | 989 | 2.17e-25 | 110 |
| MS.gene50887.t1 | MTR_5g070960 | 38.559 | 236 | 133 | 6 | 1 | 231 | 644 | 872 | 2.58e-25 | 110 |
| MS.gene50887.t1 | MTR_5g028610 | 26.200 | 500 | 293 | 18 | 1 | 486 | 633 | 1070 | 5.10e-25 | 109 |
| MS.gene50887.t1 | MTR_5g028290 | 27.668 | 506 | 291 | 17 | 1 | 486 | 663 | 1113 | 7.89e-25 | 109 |
| MS.gene50887.t1 | MTR_5g037460 | 34.307 | 274 | 150 | 9 | 1 | 267 | 514 | 764 | 1.73e-24 | 107 |
| MS.gene50887.t1 | MTR_2g078070 | 33.992 | 253 | 133 | 10 | 1 | 231 | 660 | 900 | 8.19e-24 | 105 |
| MS.gene50887.t1 | MTR_5g034770 | 34.874 | 238 | 138 | 8 | 1 | 234 | 631 | 855 | 1.12e-23 | 105 |
| MS.gene50887.t1 | MTR_3g024450 | 67.105 | 76 | 24 | 1 | 423 | 497 | 1 | 76 | 3.91e-23 | 93.2 |
| MS.gene50887.t1 | MTR_5g040770 | 31.053 | 380 | 221 | 13 | 2 | 369 | 417 | 767 | 6.32e-23 | 103 |
| MS.gene50887.t1 | MTR_5g028420 | 28.728 | 456 | 234 | 20 | 1 | 391 | 630 | 1059 | 7.87e-23 | 103 |
| MS.gene50887.t1 | MTR_5g072250 | 37.917 | 240 | 133 | 5 | 1 | 227 | 640 | 876 | 2.36e-22 | 101 |
| MS.gene50887.t1 | MTR_0958s0010 | 67.123 | 73 | 23 | 1 | 175 | 247 | 53 | 124 | 5.54e-22 | 91.7 |
| MS.gene50887.t1 | MTR_5g035480 | 32.506 | 403 | 196 | 19 | 1 | 391 | 635 | 973 | 9.98e-22 | 99.8 |
| MS.gene50887.t1 | MTR_5g035200 | 33.333 | 348 | 203 | 17 | 17 | 347 | 2 | 337 | 1.81e-21 | 96.3 |
| MS.gene50887.t1 | MTR_3g014460 | 26.233 | 446 | 219 | 16 | 154 | 493 | 2 | 443 | 2.15e-21 | 97.1 |
| MS.gene50887.t1 | MTR_5g037500 | 33.649 | 211 | 135 | 4 | 1 | 208 | 585 | 793 | 6.75e-21 | 97.1 |
| MS.gene50887.t1 | MTR_6g046760 | 27.273 | 495 | 286 | 18 | 15 | 496 | 4 | 437 | 1.27e-20 | 94.7 |
| MS.gene50887.t1 | MTR_3g048110 | 34.161 | 161 | 85 | 3 | 332 | 492 | 37 | 176 | 1.73e-20 | 89.4 |
| MS.gene50887.t1 | MTR_5g035240 | 33.725 | 255 | 157 | 9 | 1 | 249 | 645 | 893 | 9.36e-20 | 93.6 |
| MS.gene50887.t1 | MTR_5g039570 | 38.824 | 170 | 99 | 3 | 5 | 172 | 415 | 581 | 1.37e-19 | 92.4 |
| MS.gene50887.t1 | MTR_5g070470 | 32.584 | 356 | 203 | 11 | 1 | 347 | 643 | 970 | 1.54e-19 | 92.8 |
| MS.gene50887.t1 | MTR_5g071470 | 36.325 | 234 | 137 | 6 | 1 | 231 | 642 | 866 | 5.30e-18 | 87.8 |
| MS.gene50887.t1 | MTR_6g016430 | 31.984 | 247 | 140 | 9 | 1 | 229 | 655 | 891 | 6.39e-18 | 87.8 |
| MS.gene50887.t1 | MTR_5g040900 | 29.930 | 284 | 151 | 10 | 1 | 251 | 588 | 856 | 1.42e-17 | 86.7 |
| MS.gene50887.t1 | MTR_6g084540 | 32.620 | 187 | 113 | 3 | 309 | 493 | 53 | 228 | 1.79e-17 | 82.0 |
| MS.gene50887.t1 | MTR_6g046450 | 25.147 | 509 | 263 | 18 | 2 | 492 | 685 | 1093 | 1.78e-16 | 83.2 |
| MS.gene50887.t1 | MTR_0425s0030 | 47.917 | 96 | 36 | 1 | 364 | 459 | 81 | 162 | 1.85e-16 | 77.4 |
| MS.gene50887.t1 | MTR_6g016420 | 31.008 | 387 | 204 | 19 | 1 | 346 | 633 | 997 | 1.88e-16 | 83.2 |
| MS.gene50887.t1 | MTR_2g014820 | 35.185 | 162 | 89 | 4 | 331 | 492 | 441 | 586 | 8.50e-16 | 80.9 |
| MS.gene50887.t1 | MTR_0005s0210 | 30.769 | 247 | 154 | 8 | 193 | 427 | 186 | 427 | 1.02e-15 | 79.7 |
| MS.gene50887.t1 | MTR_3g022980 | 61.290 | 62 | 23 | 1 | 184 | 245 | 1 | 61 | 1.32e-15 | 71.6 |
| MS.gene50887.t1 | MTR_6g016420 | 36.410 | 195 | 112 | 6 | 1 | 190 | 633 | 820 | 2.17e-15 | 79.7 |
| MS.gene50887.t1 | MTR_3g048040 | 35.971 | 139 | 74 | 4 | 343 | 481 | 59 | 182 | 5.96e-15 | 75.1 |
| MS.gene50887.t1 | MTR_3g015550 | 30.220 | 182 | 100 | 7 | 1 | 158 | 682 | 860 | 2.08e-14 | 76.6 |
| MS.gene50887.t1 | MTR_6g046750 | 27.523 | 436 | 215 | 20 | 15 | 420 | 4 | 368 | 2.12e-14 | 75.5 |
| MS.gene50887.t1 | MTR_3g015550 | 30.220 | 182 | 100 | 7 | 1 | 158 | 645 | 823 | 2.15e-14 | 76.6 |
| MS.gene50887.t1 | MTR_4g021690 | 28.448 | 232 | 143 | 11 | 1 | 218 | 659 | 881 | 7.87e-12 | 68.6 |
| MS.gene50887.t1 | MTR_3g022140 | 57.895 | 57 | 14 | 1 | 89 | 145 | 9 | 55 | 8.74e-12 | 60.5 |
| MS.gene50887.t1 | MTR_3g015280 | 30.065 | 153 | 101 | 4 | 1 | 150 | 645 | 794 | 9.33e-12 | 68.2 |
| MS.gene50887.t1 | MTR_6g046550 | 27.532 | 385 | 187 | 17 | 133 | 491 | 337 | 655 | 2.98e-11 | 66.2 |
| MS.gene50887.t1 | MTR_3g031860 | 28.646 | 192 | 110 | 4 | 329 | 497 | 1 | 188 | 3.79e-11 | 64.7 |
| MS.gene50887.t1 | MTR_4g022460 | 28.354 | 395 | 231 | 18 | 1 | 373 | 658 | 1022 | 4.17e-11 | 66.2 |
| MS.gene50887.t1 | MTR_6g079000 | 27.361 | 413 | 226 | 19 | 109 | 495 | 829 | 1193 | 5.89e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50887.t1 | AT3G14470 | 38.645 | 251 | 136 | 4 | 1 | 234 | 664 | 913 | 3.14e-45 | 170 |
| MS.gene50887.t1 | AT3G14470 | 38.645 | 251 | 136 | 4 | 1 | 234 | 664 | 913 | 3.14e-45 | 170 |
| MS.gene50887.t1 | AT3G14460 | 37.449 | 243 | 138 | 6 | 1 | 230 | 658 | 899 | 1.68e-37 | 147 |
| MS.gene50887.t1 | AT3G14460 | 32.399 | 321 | 183 | 14 | 194 | 493 | 1113 | 1420 | 2.23e-22 | 101 |
| MS.gene50887.t1 | AT1G58602 | 25.617 | 527 | 291 | 30 | 4 | 492 | 674 | 1137 | 7.35e-12 | 68.6 |
| MS.gene50887.t1 | AT1G58602 | 25.617 | 527 | 291 | 30 | 4 | 492 | 674 | 1137 | 7.35e-12 | 68.6 |
Find 117 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAACTTTGTATTTC+AGG | 0.106917 | 3.1:-14003242 | MS.gene50887:CDS |
| TCATACTTCCCTTTAATTAA+TGG | 0.159494 | 3.1:+14001955 | None:intergenic |
| TCCGATTGTCCATTAATTAA+AGG | 0.164251 | 3.1:-14001964 | MS.gene50887:CDS |
| CTTAGAAGACTTTCAATAAA+AGG | 0.182419 | 3.1:-14002417 | MS.gene50887:CDS |
| ATTTGCTCCTGCGGCATCTT+TGG | 0.187333 | 3.1:+14003199 | None:intergenic |
| CTCTCATAGAACTACATATT+TGG | 0.212594 | 3.1:-14002053 | MS.gene50887:CDS |
| AGTTATCCCTTTGGGAAAAT+AGG | 0.218154 | 3.1:-14002557 | MS.gene50887:CDS |
| TTTCTTGAAGCAATCAGTTT+TGG | 0.226812 | 3.1:+14002252 | None:intergenic |
| ACAGAGATGTGATAGAATTT+TGG | 0.232542 | 3.1:-14002607 | MS.gene50887:CDS |
| AGCCTCTTCAAGTTGCTATT+TGG | 0.275433 | 3.1:+14003074 | None:intergenic |
| GTGAACAAGTGTAGTGAAAA+AGG | 0.300630 | 3.1:+14002375 | None:intergenic |
| TTTGCTCCTGCGGCATCTTT+GGG | 0.307120 | 3.1:+14003200 | None:intergenic |
| CTGTGTAAACTGTCCCTCTT+TGG | 0.314758 | 3.1:-14002460 | MS.gene50887:CDS |
| TTGGGCAATTCTCTATATAA+AGG | 0.332972 | 3.1:+14002271 | None:intergenic |
| CCGATTGTCCATTAATTAAA+GGG | 0.345615 | 3.1:-14001963 | MS.gene50887:CDS |
| AAGGTAATAACTTTCCGAAT+TGG | 0.350969 | 3.1:-14003034 | MS.gene50887:CDS |
| CCTCAAATTTCAAAACTTCA+AGG | 0.368610 | 3.1:+14002826 | None:intergenic |
| GTTCAACAAATGTTTCGTTC+AGG | 0.368811 | 3.1:-14002851 | MS.gene50887:CDS |
| TTTAGACTCCCTATCTGCTT+TGG | 0.376137 | 3.1:+14003347 | None:intergenic |
| TGCTTAAAGAGATTTCTATA+TGG | 0.376484 | 3.1:-14002758 | MS.gene50887:CDS |
| ACATGTAGAAGAATTATATA+TGG | 0.383133 | 3.1:-14003162 | MS.gene50887:CDS |
| CCCTTTAATTAATGGACAAT+CGG | 0.392758 | 3.1:+14001963 | None:intergenic |
| GGTGGCAGCAGATTCTTCTC+TGG | 0.407897 | 3.1:+14002153 | None:intergenic |
| AAGAAAATGCCAAAGCAGAT+AGG | 0.409399 | 3.1:-14003356 | None:intergenic |
| GAAACTTTGTATTTCAGGAT+TGG | 0.418664 | 3.1:-14003237 | MS.gene50887:CDS |
| ACTGATGAAGAATGACTTCA+AGG | 0.420723 | 3.1:+14002203 | None:intergenic |
| GGTAATCTCAATCGTCTTCA+AGG | 0.423766 | 3.1:-14003260 | MS.gene50887:CDS |
| AATTTGAGGAGATGAACAAT+TGG | 0.425367 | 3.1:-14002812 | MS.gene50887:CDS |
| GGAATTGTCCCAAATTGAAA+AGG | 0.426070 | 3.1:-14002737 | MS.gene50887:CDS |
| ATACAAAGAGTTTGAAGAGT+TGG | 0.427497 | 3.1:+14002132 | None:intergenic |
| TCAATAGAAGTAATGGAGTT+GGG | 0.431599 | 3.1:+14001991 | None:intergenic |
| GCTGCTCAAGTGGTGGCAAA+TGG | 0.432425 | 3.1:+14002949 | None:intergenic |
| TGACAATCCGTTATCCAATT+CGG | 0.437844 | 3.1:+14003020 | None:intergenic |
| TCTGGCAAGCGCTCAAGAAT+AGG | 0.438116 | 3.1:+14002024 | None:intergenic |
| ATCCCTCATGTGACGATTGA+CGG | 0.443445 | 3.1:-14001895 | MS.gene50887:CDS |
| AGAGCTGGAATGGTTTCAAA+TGG | 0.444732 | 3.1:-14002319 | MS.gene50887:CDS |
| GTGGCAGCAGATTCTTCTCT+GGG | 0.446188 | 3.1:+14002154 | None:intergenic |
| TTTGTTGTGGGAGAGGAGAA+TGG | 0.446857 | 3.1:-14003302 | MS.gene50887:CDS |
| ATTTGAAACCATTCCAGCTC+TGG | 0.452561 | 3.1:+14002321 | None:intergenic |
| ATTTGAGGAGATGAACAATT+GGG | 0.456261 | 3.1:-14002811 | MS.gene50887:CDS |
| TTCAATAGAAGTAATGGAGT+TGG | 0.461535 | 3.1:+14001990 | None:intergenic |
| CATTCTTGAAGAGTTGAAGT+TGG | 0.466423 | 3.1:-14002493 | MS.gene50887:CDS |
| TAACTTTCCGAATTGGATAA+CGG | 0.466973 | 3.1:-14003027 | MS.gene50887:CDS |
| GGAAATTTCAATAGAAGTAA+TGG | 0.473256 | 3.1:+14001984 | None:intergenic |
| TAGATACAGAGAATGAAGTT+TGG | 0.473893 | 3.1:+14002353 | None:intergenic |
| AATGACTTAGTGTTTGAAGA+TGG | 0.474638 | 3.1:+14003324 | None:intergenic |
| CTCTATGATACTATCACCCT+TGG | 0.480758 | 3.1:+14002638 | None:intergenic |
| GGGTGGATTGCCTTCCCACT+TGG | 0.481758 | 3.1:-14002298 | MS.gene50887:CDS |
| CAACTTCAACTCTTCAAGAA+TGG | 0.485821 | 3.1:+14002494 | None:intergenic |
| AGATGAACAATTGGGAGGAA+TGG | 0.494287 | 3.1:-14002803 | MS.gene50887:CDS |
| CTCAAATTTCAAAACTTCAA+GGG | 0.494781 | 3.1:+14002827 | None:intergenic |
| CTGCTCAAGTGGTGGCAAAT+GGG | 0.496023 | 3.1:+14002950 | None:intergenic |
| TTGTTGTGGGAGAGGAGAAT+GGG | 0.498287 | 3.1:-14003301 | MS.gene50887:CDS |
| AGAAAATGCCAAAGCAGATA+GGG | 0.500073 | 3.1:-14003355 | None:intergenic |
| CAAAGAGTTTGAAGAGTTGG+TGG | 0.501616 | 3.1:+14002135 | None:intergenic |
| GAATTGTCCCAAATTGAAAA+GGG | 0.501914 | 3.1:-14002736 | MS.gene50887:CDS |
| ACGATTGTCCAGAGCTGGAA+TGG | 0.512207 | 3.1:-14002329 | MS.gene50887:CDS |
| TCTATACGATTGTCCAGAGC+TGG | 0.512661 | 3.1:-14002334 | MS.gene50887:CDS |
| TAAAGGGAAGTATGAAAAGG+AGG | 0.513378 | 3.1:-14001947 | MS.gene50887:CDS |
| AACCAAATAGCAACTTGAAG+AGG | 0.515741 | 3.1:-14003076 | MS.gene50887:CDS |
| ATGACTTCAAGGAATTGAGT+TGG | 0.515775 | 3.1:+14002214 | None:intergenic |
| GATTGCTTCAAGAAAGGAGT+GGG | 0.516275 | 3.1:-14002244 | MS.gene50887:CDS |
| AAGAGAATCGAATGTCTTTG+AGG | 0.516307 | 3.1:-14003105 | MS.gene50887:CDS |
| AAAACTGATTGCTTCAAGAA+AGG | 0.519061 | 3.1:-14002250 | MS.gene50887:CDS |
| ATCTTTCAAATTTGCTCCTG+CGG | 0.526005 | 3.1:+14003190 | None:intergenic |
| AATTAAAGGGAAGTATGAAA+AGG | 0.527325 | 3.1:-14001950 | MS.gene50887:CDS |
| TATATAAAGGTAGGCCAAGT+GGG | 0.541441 | 3.1:+14002284 | None:intergenic |
| TGTATAGAAGGAAGGTGTTG+AGG | 0.543284 | 3.1:+14002705 | None:intergenic |
| GAGTTGGGTAGAGCCTCCTC+TGG | 0.547181 | 3.1:+14002006 | None:intergenic |
| GGGAAGTATGAAAAGGAGGG+AGG | 0.548055 | 3.1:-14001943 | MS.gene50887:CDS |
| AGTTGAAGAGATACTAAGTT+GGG | 0.549467 | 3.1:+14002993 | None:intergenic |
| GTTCTATGAGAGATTTGAGG+TGG | 0.553757 | 3.1:+14002064 | None:intergenic |
| CTGGAATGGTTTCAAATGGG+TGG | 0.556265 | 3.1:-14002315 | MS.gene50887:CDS |
| ATAGAAATCTCTTTAAGCAA+AGG | 0.556486 | 3.1:+14002762 | None:intergenic |
| GAAGACTTTCAATAAAAGGA+TGG | 0.559105 | 3.1:-14002413 | MS.gene50887:CDS |
| AATTTCAAATTCAACAACAA+TGG | 0.559670 | 3.1:-14003128 | MS.gene50887:CDS |
| GATTTGTGATTGCAACAAGT+TGG | 0.562183 | 3.1:-14002673 | MS.gene50887:CDS |
| TCTTGAGCGCTTGCCAGAGG+AGG | 0.562925 | 3.1:-14002019 | MS.gene50887:CDS |
| GAGCTGGAATGGTTTCAAAT+GGG | 0.565131 | 3.1:-14002318 | MS.gene50887:CDS |
| AAAGGGAAGTATGAAAAGGA+GGG | 0.569371 | 3.1:-14001946 | MS.gene50887:CDS |
| AGGAAGGTGTTGAGGCAGCA+AGG | 0.570831 | 3.1:+14002713 | None:intergenic |
| CAGTTGAAGAGATACTAAGT+TGG | 0.576599 | 3.1:+14002992 | None:intergenic |
| CAGTGATGAGTTTGAAAACG+TGG | 0.580697 | 3.1:-14002184 | MS.gene50887:CDS |
| AAAGAAAGCTCCTTGAGAGA+GGG | 0.580856 | 3.1:+14002924 | None:intergenic |
| TGAGGAGATGAACAATTGGG+AGG | 0.582844 | 3.1:-14002808 | MS.gene50887:CDS |
| AGAGAGGGGAGCTGCTCAAG+TGG | 0.583696 | 3.1:+14002939 | None:intergenic |
| AGGTACACCGAGTTCTCTGT+GGG | 0.584117 | 3.1:-14002537 | MS.gene50887:CDS |
| TCTATGATACTATCACCCTT+GGG | 0.584644 | 3.1:+14002639 | None:intergenic |
| CTTTACATTGGAAGATACAA+AGG | 0.584838 | 3.1:-14003053 | MS.gene50887:CDS |
| GTAGTTCTATGAGAGATTTG+AGG | 0.589221 | 3.1:+14002061 | None:intergenic |
| TAAAGGTAGGCCAAGTGGGA+AGG | 0.589246 | 3.1:+14002288 | None:intergenic |
| TGAGCAGCTCCCCTCTCTCA+AGG | 0.589937 | 3.1:-14002934 | MS.gene50887:CDS |
| AAGAAAGCTCCTTGAGAGAG+GGG | 0.592992 | 3.1:+14002925 | None:intergenic |
| GTAATCTCAATCGTCTTCAA+GGG | 0.593987 | 3.1:-14003259 | MS.gene50887:CDS |
| GCAATTCTCTATATAAAGGT+AGG | 0.594086 | 3.1:+14002275 | None:intergenic |
| TATTCTTGAGCGCTTGCCAG+AGG | 0.598312 | 3.1:-14002022 | MS.gene50887:CDS |
| AAAAGAAAGCTCCTTGAGAG+AGG | 0.599316 | 3.1:+14002923 | None:intergenic |
| GTTGGAAGCATCAATTCCCA+AGG | 0.608264 | 3.1:-14002655 | MS.gene50887:CDS |
| AAAAGGAGGGAGGAGAGCGT+TGG | 0.608466 | 3.1:-14001933 | MS.gene50887:CDS |
| TAGCAATGTAAATCCAAAGA+GGG | 0.612636 | 3.1:+14002447 | None:intergenic |
| ATTAATCCCAAAGATGCCGC+AGG | 0.619720 | 3.1:-14003206 | MS.gene50887:CDS |
| TGCAACGGAATAAAGATCAT+CGG | 0.623569 | 3.1:-14002894 | MS.gene50887:CDS |
| ATTCCGTCAATCGTCACATG+AGG | 0.624587 | 3.1:+14001892 | None:intergenic |
| GAGGGGAGCTGCTCAAGTGG+TGG | 0.626932 | 3.1:+14002942 | None:intergenic |
| TTCCGTCAATCGTCACATGA+GGG | 0.627009 | 3.1:+14001893 | None:intergenic |
| GAGTTGAAGTTGGATTTCAG+AGG | 0.630797 | 3.1:-14002483 | MS.gene50887:CDS |
| ATAGCAATGTAAATCCAAAG+AGG | 0.631113 | 3.1:+14002446 | None:intergenic |
| CTATATAAAGGTAGGCCAAG+TGG | 0.633204 | 3.1:+14002283 | None:intergenic |
| AACTTGAAGAGGCTTTACAT+TGG | 0.635877 | 3.1:-14003065 | MS.gene50887:CDS |
| TAGGTACACCGAGTTCTCTG+TGG | 0.640083 | 3.1:-14002538 | MS.gene50887:CDS |
| TGATTGCTTCAAGAAAGGAG+TGG | 0.658883 | 3.1:-14002245 | MS.gene50887:CDS |
| GCTAAGAATAATGAACAACA+AGG | 0.660424 | 3.1:-14002094 | MS.gene50887:CDS |
| ATTGCTTCAAGAAAGGAGTG+GGG | 0.686935 | 3.1:-14002243 | MS.gene50887:CDS |
| CTAAGAATAATGAACAACAA+GGG | 0.693507 | 3.1:-14002093 | MS.gene50887:CDS |
| TTGGAAGCATCAATTCCCAA+GGG | 0.700439 | 3.1:-14002654 | MS.gene50887:CDS |
| TCTCTTCAACTGCATCACTG+TGG | 0.718418 | 3.1:-14002981 | MS.gene50887:CDS |
| GGTACACCGAGTTCTCTGTG+GGG | 0.818687 | 3.1:-14002536 | MS.gene50887:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAAATTCAACAACAA+TGG | - | chr3.1:14002101-14002120 | MS.gene50887:CDS | 20.0% |
| !! | ACATGTAGAAGAATTATATA+TGG | - | chr3.1:14002067-14002086 | MS.gene50887:CDS | 20.0% |
| !!! | ATCTTCAATTTTTGTATAGA+AGG | + | chr3.1:14002539-14002558 | None:intergenic | 20.0% |
| ! | ATAGAAATCTCTTTAAGCAA+AGG | + | chr3.1:14002470-14002489 | None:intergenic | 25.0% |
| ! | CTAAGAATAATGAACAACAA+GGG | - | chr3.1:14003136-14003155 | MS.gene50887:CDS | 25.0% |
| ! | CTCAAATTTCAAAACTTCAA+GGG | + | chr3.1:14002405-14002424 | None:intergenic | 25.0% |
| ! | CTTAGAAGACTTTCAATAAA+AGG | - | chr3.1:14002812-14002831 | MS.gene50887:CDS | 25.0% |
| ! | GGAAATTTCAATAGAAGTAA+TGG | + | chr3.1:14003248-14003267 | None:intergenic | 25.0% |
| ! | TCATACTTCCCTTTAATTAA+TGG | + | chr3.1:14003277-14003296 | None:intergenic | 25.0% |
| ! | TGCTTAAAGAGATTTCTATA+TGG | - | chr3.1:14002471-14002490 | MS.gene50887:CDS | 25.0% |
| !! | AATTAAAGGGAAGTATGAAA+AGG | - | chr3.1:14003279-14003298 | MS.gene50887:CDS | 25.0% |
| !! | TCAATTTTTGTATAGAAGGA+AGG | + | chr3.1:14002535-14002554 | None:intergenic | 25.0% |
| AAAACTGATTGCTTCAAGAA+AGG | - | chr3.1:14002979-14002998 | MS.gene50887:CDS | 30.0% | |
| AAGGTAATAACTTTCCGAAT+TGG | - | chr3.1:14002195-14002214 | MS.gene50887:CDS | 30.0% | |
| AATGACTTAGTGTTTGAAGA+TGG | + | chr3.1:14001908-14001927 | None:intergenic | 30.0% | |
| AATTTGAGGAGATGAACAAT+TGG | - | chr3.1:14002417-14002436 | MS.gene50887:CDS | 30.0% | |
| AGTTGAAGAGATACTAAGTT+GGG | + | chr3.1:14002239-14002258 | None:intergenic | 30.0% | |
| ATACAAAGAGTTTGAAGAGT+TGG | + | chr3.1:14003100-14003119 | None:intergenic | 30.0% | |
| ATAGCAATGTAAATCCAAAG+AGG | + | chr3.1:14002786-14002805 | None:intergenic | 30.0% | |
| ATTTGAGGAGATGAACAATT+GGG | - | chr3.1:14002418-14002437 | MS.gene50887:CDS | 30.0% | |
| CCGATTGTCCATTAATTAAA+GGG | - | chr3.1:14003266-14003285 | MS.gene50887:CDS | 30.0% | |
| CCTCAAATTTCAAAACTTCA+AGG | + | chr3.1:14002406-14002425 | None:intergenic | 30.0% | |
| CTCTCATAGAACTACATATT+TGG | - | chr3.1:14003176-14003195 | MS.gene50887:CDS | 30.0% | |
| CTTGAAAAAGTTATCCCTTT+GGG | - | chr3.1:14002664-14002683 | MS.gene50887:CDS | 30.0% | |
| CTTTACATTGGAAGATACAA+AGG | - | chr3.1:14002176-14002195 | MS.gene50887:CDS | 30.0% | |
| GAAACTTTGTATTTCAGGAT+TGG | - | chr3.1:14001992-14002011 | MS.gene50887:CDS | 30.0% | |
| GAAGACTTTCAATAAAAGGA+TGG | - | chr3.1:14002816-14002835 | MS.gene50887:CDS | 30.0% | |
| GAATTGTCCCAAATTGAAAA+GGG | - | chr3.1:14002493-14002512 | MS.gene50887:CDS | 30.0% | |
| GCAATTCTCTATATAAAGGT+AGG | + | chr3.1:14002957-14002976 | None:intergenic | 30.0% | |
| GCTAAGAATAATGAACAACA+AGG | - | chr3.1:14003135-14003154 | MS.gene50887:CDS | 30.0% | |
| TAACTTTCCGAATTGGATAA+CGG | - | chr3.1:14002202-14002221 | MS.gene50887:CDS | 30.0% | |
| TAGATACAGAGAATGAAGTT+TGG | + | chr3.1:14002879-14002898 | None:intergenic | 30.0% | |
| TAGCAATGTAAATCCAAAGA+GGG | + | chr3.1:14002785-14002804 | None:intergenic | 30.0% | |
| TCCGATTGTCCATTAATTAA+AGG | - | chr3.1:14003265-14003284 | MS.gene50887:CDS | 30.0% | |
| TTGGGCAATTCTCTATATAA+AGG | + | chr3.1:14002961-14002980 | None:intergenic | 30.0% | |
| ! | ACAGAGATGTGATAGAATTT+TGG | - | chr3.1:14002622-14002641 | MS.gene50887:CDS | 30.0% |
| ! | CCCTTTAATTAATGGACAAT+CGG | + | chr3.1:14003269-14003288 | None:intergenic | 30.0% |
| ! | TCAATAGAAGTAATGGAGTT+GGG | + | chr3.1:14003241-14003260 | None:intergenic | 30.0% |
| ! | TTCAATAGAAGTAATGGAGT+TGG | + | chr3.1:14003242-14003261 | None:intergenic | 30.0% |
| ! | TTCTTGAAGCAATCAGTTTT+GGG | + | chr3.1:14002979-14002998 | None:intergenic | 30.0% |
| ! | TTTCTTGAAGCAATCAGTTT+TGG | + | chr3.1:14002980-14002999 | None:intergenic | 30.0% |
| !! | AACACTAAGTCATTTTGTTG+TGG | - | chr3.1:14001914-14001933 | MS.gene50887:CDS | 30.0% |
| !! | ACACTAAGTCATTTTGTTGT+GGG | - | chr3.1:14001915-14001934 | MS.gene50887:CDS | 30.0% |
| !!! | CCTTGAAGTTTTGAAATTTG+AGG | - | chr3.1:14002403-14002422 | MS.gene50887:CDS | 30.0% |
| !!! | CTTTCTTTTTCAAACTGCAA+CGG | - | chr3.1:14002320-14002339 | MS.gene50887:CDS | 30.0% |
| !!! | GATAACTTTTTCAAGCTGAT+CGG | + | chr3.1:14002659-14002678 | None:intergenic | 30.0% |
| AACCAAATAGCAACTTGAAG+AGG | - | chr3.1:14002153-14002172 | MS.gene50887:CDS | 35.0% | |
| AACTTGAAGAGGCTTTACAT+TGG | - | chr3.1:14002164-14002183 | MS.gene50887:CDS | 35.0% | |
| AAGAGAATCGAATGTCTTTG+AGG | - | chr3.1:14002124-14002143 | MS.gene50887:CDS | 35.0% | |
| ACTGATGAAGAATGACTTCA+AGG | + | chr3.1:14003029-14003048 | None:intergenic | 35.0% | |
| ATGACTTCAAGGAATTGAGT+TGG | + | chr3.1:14003018-14003037 | None:intergenic | 35.0% | |
| CAACTTCAACTCTTCAAGAA+TGG | + | chr3.1:14002738-14002757 | None:intergenic | 35.0% | |
| CAAGGGAAACTTTGTATTTC+AGG | - | chr3.1:14001987-14002006 | MS.gene50887:CDS | 35.0% | |
| CAGTTGAAGAGATACTAAGT+TGG | + | chr3.1:14002240-14002259 | None:intergenic | 35.0% | |
| CATTCTTGAAGAGTTGAAGT+TGG | - | chr3.1:14002736-14002755 | MS.gene50887:CDS | 35.0% | |
| GATTTGTGATTGCAACAAGT+TGG | - | chr3.1:14002556-14002575 | MS.gene50887:CDS | 35.0% | |
| GCTTGAAAAAGTTATCCCTT+TGG | - | chr3.1:14002663-14002682 | MS.gene50887:CDS | 35.0% | |
| GGAATTGTCCCAAATTGAAA+AGG | - | chr3.1:14002492-14002511 | MS.gene50887:CDS | 35.0% | |
| GTAATCTCAATCGTCTTCAA+GGG | - | chr3.1:14001970-14001989 | MS.gene50887:CDS | 35.0% | |
| GTGAACAAGTGTAGTGAAAA+AGG | + | chr3.1:14002857-14002876 | None:intergenic | 35.0% | |
| GTTCAACAAATGTTTCGTTC+AGG | - | chr3.1:14002378-14002397 | MS.gene50887:CDS | 35.0% | |
| TATATAAAGGTAGGCCAAGT+GGG | + | chr3.1:14002948-14002967 | None:intergenic | 35.0% | |
| TCTATGATACTATCACCCTT+GGG | + | chr3.1:14002593-14002612 | None:intergenic | 35.0% | |
| TGACAATCCGTTATCCAATT+CGG | + | chr3.1:14002212-14002231 | None:intergenic | 35.0% | |
| TGCAACGGAATAAAGATCAT+CGG | - | chr3.1:14002335-14002354 | MS.gene50887:CDS | 35.0% | |
| ! | AAAGGGAAGTATGAAAAGGA+GGG | - | chr3.1:14003283-14003302 | MS.gene50887:CDS | 35.0% |
| ! | AGTTATCCCTTTGGGAAAAT+AGG | - | chr3.1:14002672-14002691 | MS.gene50887:CDS | 35.0% |
| ! | ATCTTTCAAATTTGCTCCTG+CGG | + | chr3.1:14002042-14002061 | None:intergenic | 35.0% |
| ! | GTAGTTCTATGAGAGATTTG+AGG | + | chr3.1:14003171-14003190 | None:intergenic | 35.0% |
| ! | TAAAGGGAAGTATGAAAAGG+AGG | - | chr3.1:14003282-14003301 | MS.gene50887:CDS | 35.0% |
| !!! | AGGAATGGTTTTGTCTTGAA+GGG | - | chr3.1:14002441-14002460 | MS.gene50887:CDS | 35.0% |
| AAAAGAAAGCTCCTTGAGAG+AGG | + | chr3.1:14002309-14002328 | None:intergenic | 40.0% | |
| AAAGAAAGCTCCTTGAGAGA+GGG | + | chr3.1:14002308-14002327 | None:intergenic | 40.0% | |
| AGAGCTGGAATGGTTTCAAA+TGG | - | chr3.1:14002910-14002929 | MS.gene50887:CDS | 40.0% | |
| AGATGAACAATTGGGAGGAA+TGG | - | chr3.1:14002426-14002445 | MS.gene50887:CDS | 40.0% | |
| ATTGCTTCAAGAAAGGAGTG+GGG | - | chr3.1:14002986-14003005 | MS.gene50887:CDS | 40.0% | |
| CAAAGAGTTTGAAGAGTTGG+TGG | + | chr3.1:14003097-14003116 | None:intergenic | 40.0% | |
| CAGTGATGAGTTTGAAAACG+TGG | - | chr3.1:14003045-14003064 | MS.gene50887:CDS | 40.0% | |
| CTATATAAAGGTAGGCCAAG+TGG | + | chr3.1:14002949-14002968 | None:intergenic | 40.0% | |
| CTCTATGATACTATCACCCT+TGG | + | chr3.1:14002594-14002613 | None:intergenic | 40.0% | |
| GAGCTGGAATGGTTTCAAAT+GGG | - | chr3.1:14002911-14002930 | MS.gene50887:CDS | 40.0% | |
| GAGTTGAAGTTGGATTTCAG+AGG | - | chr3.1:14002746-14002765 | MS.gene50887:CDS | 40.0% | |
| GATTGCTTCAAGAAAGGAGT+GGG | - | chr3.1:14002985-14003004 | MS.gene50887:CDS | 40.0% | |
| GGTAATCTCAATCGTCTTCA+AGG | - | chr3.1:14001969-14001988 | MS.gene50887:CDS | 40.0% | |
| GTTCTATGAGAGATTTGAGG+TGG | + | chr3.1:14003168-14003187 | None:intergenic | 40.0% | |
| TGATTGCTTCAAGAAAGGAG+TGG | - | chr3.1:14002984-14003003 | MS.gene50887:CDS | 40.0% | |
| TTTAGACTCCCTATCTGCTT+TGG | + | chr3.1:14001885-14001904 | None:intergenic | 40.0% | |
| ! | AGCAAGGCCCTTTTCAATTT+GGG | + | chr3.1:14002503-14002522 | None:intergenic | 40.0% |
| ! | ATCATCGGCGAAGAGTTTTA+CGG | - | chr3.1:14002350-14002369 | MS.gene50887:CDS | 40.0% |
| ! | ATTTGAAACCATTCCAGCTC+TGG | + | chr3.1:14002911-14002930 | None:intergenic | 40.0% |
| ! | GGAGAATGGGTCTAATTTTC+AGG | - | chr3.1:14001941-14001960 | MS.gene50887:CDS | 40.0% |
| ! | GGTGTACCTATTTTCCCAAA+GGG | + | chr3.1:14002681-14002700 | None:intergenic | 40.0% |
| !! | AAGTCATTTTGTTGTGGGAG+AGG | - | chr3.1:14001920-14001939 | MS.gene50887:CDS | 40.0% |
| !! | AGCCTCTTCAAGTTGCTATT+TGG | + | chr3.1:14002158-14002177 | None:intergenic | 40.0% |
| !! | GGGTCTAATTTTCAGGAGTT+GGG | - | chr3.1:14001948-14001967 | MS.gene50887:CDS | 40.0% |
| !! | TGGGTCTAATTTTCAGGAGT+TGG | - | chr3.1:14001947-14001966 | MS.gene50887:CDS | 40.0% |
| !! | TGTATAGAAGGAAGGTGTTG+AGG | + | chr3.1:14002527-14002546 | None:intergenic | 40.0% |
| !! | TTGGAAGCATCAATTCCCAA+GGG | - | chr3.1:14002575-14002594 | MS.gene50887:CDS | 40.0% |
| !!! | GAGGAATGGTTTTGTCTTGA+AGG | - | chr3.1:14002440-14002459 | MS.gene50887:CDS | 40.0% |
| AAGAAAGCTCCTTGAGAGAG+GGG | + | chr3.1:14002307-14002326 | None:intergenic | 45.0% | |
| ATCCCTCATGTGACGATTGA+CGG | - | chr3.1:14003334-14003353 | MS.gene50887:CDS | 45.0% | |
| ATTAATCCCAAAGATGCCGC+AGG | - | chr3.1:14002023-14002042 | MS.gene50887:CDS | 45.0% | |
| ATTCCGTCAATCGTCACATG+AGG | + | chr3.1:14003340-14003359 | None:intergenic | 45.0% | |
| CTGGAATGGTTTCAAATGGG+TGG | - | chr3.1:14002914-14002933 | MS.gene50887:CDS | 45.0% | |
| CTGTGTAAACTGTCCCTCTT+TGG | - | chr3.1:14002769-14002788 | MS.gene50887:CDS | 45.0% | |
| GTGTAGTGAAAAAGGCAACG+AGG | + | chr3.1:14002849-14002868 | None:intergenic | 45.0% | |
| TCTATACGATTGTCCAGAGC+TGG | - | chr3.1:14002895-14002914 | MS.gene50887:CDS | 45.0% | |
| TCTCTTCAACTGCATCACTG+TGG | - | chr3.1:14002248-14002267 | MS.gene50887:CDS | 45.0% | |
| TGAGGAGATGAACAATTGGG+AGG | - | chr3.1:14002421-14002440 | MS.gene50887:CDS | 45.0% | |
| TTCCGTCAATCGTCACATGA+GGG | + | chr3.1:14003339-14003358 | None:intergenic | 45.0% | |
| TTGTTGTGGGAGAGGAGAAT+GGG | - | chr3.1:14001928-14001947 | MS.gene50887:CDS | 45.0% | |
| ! | CAGCAAGGCCCTTTTCAATT+TGG | + | chr3.1:14002504-14002523 | None:intergenic | 45.0% |
| ! | CGGTGTACCTATTTTCCCAA+AGG | + | chr3.1:14002682-14002701 | None:intergenic | 45.0% |
| ! | TTTGTTGTGGGAGAGGAGAA+TGG | - | chr3.1:14001927-14001946 | MS.gene50887:CDS | 45.0% |
| ! | TTTTTGCCCCACAGAGAACT+CGG | + | chr3.1:14002702-14002721 | None:intergenic | 45.0% |
| !! | GTTGGAAGCATCAATTCCCA+AGG | - | chr3.1:14002574-14002593 | MS.gene50887:CDS | 45.0% |
| ACGATTGTCCAGAGCTGGAA+TGG | - | chr3.1:14002900-14002919 | MS.gene50887:CDS | 50.0% | |
| AGGTACACCGAGTTCTCTGT+GGG | - | chr3.1:14002692-14002711 | MS.gene50887:CDS | 50.0% | |
| ATTTGCTCCTGCGGCATCTT+TGG | + | chr3.1:14002033-14002052 | None:intergenic | 50.0% | |
| CTGCTCAAGTGGTGGCAAAT+GGG | + | chr3.1:14002282-14002301 | None:intergenic | 50.0% | |
| GTGGCAGCAGATTCTTCTCT+GGG | + | chr3.1:14003078-14003097 | None:intergenic | 50.0% | |
| TAAAGGTAGGCCAAGTGGGA+AGG | + | chr3.1:14002944-14002963 | None:intergenic | 50.0% | |
| TAGGTACACCGAGTTCTCTG+TGG | - | chr3.1:14002691-14002710 | MS.gene50887:CDS | 50.0% | |
| TATTCTTGAGCGCTTGCCAG+AGG | - | chr3.1:14003207-14003226 | MS.gene50887:CDS | 50.0% | |
| TCTGGCAAGCGCTCAAGAAT+AGG | + | chr3.1:14003208-14003227 | None:intergenic | 50.0% | |
| TTTGCTCCTGCGGCATCTTT+GGG | + | chr3.1:14002032-14002051 | None:intergenic | 50.0% | |
| ! | GGGAAGTATGAAAAGGAGGG+AGG | - | chr3.1:14003286-14003305 | MS.gene50887:CDS | 50.0% |
| GCTGCTCAAGTGGTGGCAAA+TGG | + | chr3.1:14002283-14002302 | None:intergenic | 55.0% | |
| GGTACACCGAGTTCTCTGTG+GGG | - | chr3.1:14002693-14002712 | MS.gene50887:CDS | 55.0% | |
| GGTGGCAGCAGATTCTTCTC+TGG | + | chr3.1:14003079-14003098 | None:intergenic | 55.0% | |
| ! | AAAAGGAGGGAGGAGAGCGT+TGG | - | chr3.1:14003296-14003315 | MS.gene50887:CDS | 55.0% |
| !! | AGGAAGGTGTTGAGGCAGCA+AGG | + | chr3.1:14002519-14002538 | None:intergenic | 55.0% |
| AGAGAGGGGAGCTGCTCAAG+TGG | + | chr3.1:14002293-14002312 | None:intergenic | 60.0% | |
| GAGTTGGGTAGAGCCTCCTC+TGG | + | chr3.1:14003226-14003245 | None:intergenic | 60.0% | |
| TCTTGAGCGCTTGCCAGAGG+AGG | - | chr3.1:14003210-14003229 | MS.gene50887:CDS | 60.0% | |
| TGAGCAGCTCCCCTCTCTCA+AGG | - | chr3.1:14002295-14002314 | MS.gene50887:CDS | 60.0% | |
| !! | GGGTGGATTGCCTTCCCACT+TGG | - | chr3.1:14002931-14002950 | MS.gene50887:CDS | 60.0% |
| GAGGGGAGCTGCTCAAGTGG+TGG | + | chr3.1:14002290-14002309 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 14001879 | 14003372 | 14001879 | ID=MS.gene50887 |
| chr3.1 | mRNA | 14001879 | 14003372 | 14001879 | ID=MS.gene50887.t1;Parent=MS.gene50887 |
| chr3.1 | exon | 14001879 | 14003372 | 14001879 | ID=MS.gene50887.t1.exon1;Parent=MS.gene50887.t1 |
| chr3.1 | CDS | 14001879 | 14003372 | 14001879 | ID=cds.MS.gene50887.t1;Parent=MS.gene50887.t1 |
| Gene Sequence |
| Protein sequence |
