AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51036

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51036.t1 MTR_4g107610 97.694 607 14 0 1 607 1 607 0.0 1227
MS.gene51036.t1 MTR_7g064780 50.258 581 270 6 25 599 20 587 0.0 585
MS.gene51036.t1 MTR_7g064800 50.167 598 286 6 5 595 1 593 0.0 577
MS.gene51036.t1 MTR_5g038060 41.569 599 334 10 2 590 4 596 7.30e-160 471
MS.gene51036.t1 MTR_4g107530 41.374 597 322 9 5 582 2 589 4.64e-157 464
MS.gene51036.t1 MTR_4g107580 41.506 571 315 8 18 575 12 576 4.84e-154 456
MS.gene51036.t1 MTR_8g469480 41.772 553 301 9 34 573 41 585 1.68e-146 437
MS.gene51036.t1 MTR_4g107510 41.058 548 306 7 34 569 39 581 9.40e-146 435
MS.gene51036.t1 MTR_5g038190 36.964 560 343 7 17 569 9 565 1.02e-132 400
MS.gene51036.t1 MTR_8g469470 37.809 566 336 8 16 569 17 578 2.56e-129 392
MS.gene51036.t1 MTR_5g055000 34.142 577 356 8 28 596 15 575 8.24e-115 354
MS.gene51036.t1 MTR_7g088825 34.867 565 348 9 24 578 15 569 3.58e-112 348
MS.gene51036.t1 MTR_7g088820 34.118 595 366 11 17 600 11 590 1.60e-111 346
MS.gene51036.t1 MTR_8g103233 33.895 593 367 13 15 597 1 578 1.13e-110 343
MS.gene51036.t1 MTR_7g067010 35.017 574 349 10 2 569 3 558 3.73e-110 342
MS.gene51036.t1 MTR_1g009200 36.542 613 346 13 8 607 4 586 4.01e-110 343
MS.gene51036.t1 MTR_7g098200 33.442 613 378 10 3 603 6 600 1.59e-108 339
MS.gene51036.t1 MTR_4g015080 35.624 553 336 10 25 569 28 568 4.77e-108 337
MS.gene51036.t1 MTR_7g088790 33.672 591 362 10 24 603 22 593 8.16e-108 337
MS.gene51036.t1 MTR_7g098200 33.607 610 371 10 3 603 6 590 1.33e-107 336
MS.gene51036.t1 MTR_2g101650 34.326 571 355 12 16 577 10 569 1.66e-105 331
MS.gene51036.t1 MTR_1g026770 32.620 561 361 8 29 582 13 563 2.14e-104 327
MS.gene51036.t1 MTR_2g101640 32.530 581 373 9 25 598 17 585 1.72e-103 327
MS.gene51036.t1 MTR_1g026750 33.453 556 356 9 33 582 20 567 3.27e-103 324
MS.gene51036.t1 MTR_1g026740 32.079 558 362 9 18 569 7 553 3.94e-103 324
MS.gene51036.t1 MTR_7g088820 35.075 536 322 11 76 600 8 528 6.28e-103 322
MS.gene51036.t1 MTR_3g462710 33.913 575 356 11 2 569 3 560 1.13e-102 323
MS.gene51036.t1 MTR_7g098180 32.933 583 364 7 31 597 31 602 2.44e-101 320
MS.gene51036.t1 MTR_7g098160 32.702 581 364 8 31 595 33 602 3.69e-101 320
MS.gene51036.t1 MTR_4g011280 30.656 610 395 12 1 602 1 590 8.73e-101 318
MS.gene51036.t1 MTR_3g112460 33.816 553 344 11 27 575 19 553 5.25e-100 316
MS.gene51036.t1 MTR_7g065080 34.846 551 339 10 33 581 33 565 5.96e-100 316
MS.gene51036.t1 MTR_4g019580 34.429 578 358 12 1 569 1 566 8.31e-100 316
MS.gene51036.t1 MTR_3g112450 34.629 566 346 10 27 582 19 570 9.73e-100 315
MS.gene51036.t1 MTR_3g112470 33.454 553 346 10 27 575 19 553 4.93e-98 310
MS.gene51036.t1 MTR_1g075440 33.849 582 353 10 31 600 28 589 3.03e-97 309
MS.gene51036.t1 MTR_2g101590 32.441 598 382 13 14 602 9 593 4.62e-97 310
MS.gene51036.t1 MTR_2g101610 32.161 597 377 14 18 602 14 594 5.79e-95 305
MS.gene51036.t1 MTR_3g069420 34.326 571 349 11 33 597 36 586 5.80e-95 303
MS.gene51036.t1 MTR_7g098230 33.088 544 335 10 40 570 35 562 8.46e-95 303
MS.gene51036.t1 MTR_3g069500 32.593 540 346 10 31 569 35 557 1.92e-94 301
MS.gene51036.t1 MTR_7g065080 36.437 494 294 10 90 581 3 478 3.33e-94 298
MS.gene51036.t1 MTR_7g098040 31.164 584 375 7 31 598 34 606 1.03e-93 301
MS.gene51036.t1 MTR_7g098090 31.911 586 367 9 31 595 33 607 3.60e-93 299
MS.gene51036.t1 MTR_7g088820 35.152 495 295 11 117 600 1 480 4.05e-93 295
MS.gene51036.t1 MTR_3g069440 32.275 567 349 13 31 580 33 581 5.72e-93 298
MS.gene51036.t1 MTR_1g041875 33.094 556 350 9 1 552 3 540 1.26e-92 297
MS.gene51036.t1 MTR_1g041835 33.045 578 363 9 1 570 1 562 5.58e-92 295
MS.gene51036.t1 MTR_1g042310 31.952 579 366 11 1 570 3 562 1.26e-91 295
MS.gene51036.t1 MTR_1g041815 33.564 578 360 9 1 570 1 562 1.30e-91 294
MS.gene51036.t1 MTR_4g033325 31.678 584 357 10 2 576 3 553 2.97e-89 287
MS.gene51036.t1 MTR_7g098220 32.664 548 350 6 31 570 30 566 4.79e-89 288
MS.gene51036.t1 MTR_7g098200 33.737 495 305 8 120 603 4 486 1.02e-88 284
MS.gene51036.t1 MTR_3g014790 32.035 565 342 10 34 582 20 558 1.19e-88 286
MS.gene51036.t1 MTR_1g057460 30.866 554 355 10 30 578 43 573 6.54e-88 284
MS.gene51036.t1 MTR_5g012270 31.746 567 367 9 27 582 25 582 1.10e-87 284
MS.gene51036.t1 MTR_3g005010 32.545 550 323 11 31 570 30 541 2.46e-87 282
MS.gene51036.t1 MTR_2g101560 32.088 589 375 12 18 593 14 590 1.28e-86 283
MS.gene51036.t1 MTR_1g042310 32.584 534 339 9 46 570 4 525 2.60e-86 280
MS.gene51036.t1 MTR_1g041885 33.202 506 322 7 50 552 1 493 8.70e-86 277
MS.gene51036.t1 MTR_2g093640 31.183 558 351 7 26 569 6 544 1.08e-85 278
MS.gene51036.t1 MTR_2g093160 31.485 559 348 9 26 569 6 544 1.70e-84 275
MS.gene51036.t1 MTR_5g014150 29.139 604 400 10 2 597 16 599 2.37e-84 276
MS.gene51036.t1 MTR_1g042310 32.453 530 337 9 50 570 1 518 4.43e-84 273
MS.gene51036.t1 MTR_7g098220 32.707 532 339 6 47 570 2 522 5.54e-84 273
MS.gene51036.t1 MTR_2g093180 32.737 559 342 7 26 569 6 545 7.23e-84 273
MS.gene51036.t1 MTR_3g072300 30.674 564 367 10 27 579 20 570 9.72e-83 271
MS.gene51036.t1 MTR_4g033315 31.004 558 348 9 25 574 25 553 3.47e-82 269
MS.gene51036.t1 MTR_4g033310 31.004 558 348 9 25 574 25 553 3.47e-82 269
MS.gene51036.t1 MTR_1g085090 31.100 582 365 12 30 599 18 575 5.95e-82 269
MS.gene51036.t1 MTR_3g462710 35.011 457 281 10 120 569 4 451 1.83e-81 264
MS.gene51036.t1 MTR_4g114340 30.651 584 379 10 17 595 13 575 2.46e-81 267
MS.gene51036.t1 MTR_8g038880 32.969 549 323 10 28 559 17 537 2.57e-81 267
MS.gene51036.t1 MTR_0294s0020 30.479 584 364 10 2 576 3 553 2.89e-81 266
MS.gene51036.t1 MTR_4g101380 32.281 570 367 9 25 582 21 583 1.38e-80 265
MS.gene51036.t1 MTR_1g057460 30.667 525 336 10 59 578 1 502 1.89e-80 263
MS.gene51036.t1 MTR_5g085850 33.457 541 339 9 25 562 24 546 3.57e-80 264
MS.gene51036.t1 MTR_0236s0050 31.619 525 331 11 59 578 1 502 7.92e-80 261
MS.gene51036.t1 MTR_2g005130 30.404 569 366 11 2 569 21 560 3.47e-79 261
MS.gene51036.t1 MTR_4g033330 31.579 532 327 9 31 554 31 533 4.31e-79 260
MS.gene51036.t1 MTR_7g006540 30.532 583 372 13 31 595 63 630 2.29e-78 261
MS.gene51036.t1 MTR_7g111260 31.843 559 353 13 18 569 6 543 6.73e-78 258
MS.gene51036.t1 MTR_4g098800 29.494 573 385 9 2 567 8 568 8.89e-78 258
MS.gene51036.t1 MTR_4g098800 29.947 561 374 9 14 567 85 633 7.03e-77 257
MS.gene51036.t1 MTR_5g012290 29.688 576 382 11 18 582 17 580 3.36e-76 254
MS.gene51036.t1 MTR_5g038380 30.496 564 353 8 33 574 30 576 4.47e-76 253
MS.gene51036.t1 MTR_2g017750 28.725 557 370 11 33 569 36 585 6.01e-74 248
MS.gene51036.t1 MTR_3g100980 30.052 579 363 11 30 595 15 564 2.92e-73 245
MS.gene51036.t1 MTR_4g033325 32.874 435 267 6 149 576 13 429 4.68e-73 241
MS.gene51036.t1 MTR_4g033325 32.874 435 267 6 149 576 39 455 5.59e-73 241
MS.gene51036.t1 MTR_1g116930 28.253 584 393 12 24 604 16 576 6.95e-73 245
MS.gene51036.t1 MTR_7g005930 27.979 579 394 11 1 569 1 566 1.05e-71 241
MS.gene51036.t1 MTR_4g033395 31.781 494 302 8 27 512 28 494 1.35e-71 239
MS.gene51036.t1 MTR_7g010820 30.411 559 364 11 5 549 1 548 1.59e-71 241
MS.gene51036.t1 MTR_4g107670 29.964 554 360 11 33 569 26 568 1.87e-71 241
MS.gene51036.t1 MTR_4g033375 31.515 495 306 7 25 512 26 494 1.65e-70 236
MS.gene51036.t1 MTR_7g098150 31.860 430 279 5 31 456 33 452 3.33e-70 235
MS.gene51036.t1 MTR_8g469310 30.000 550 371 7 33 573 28 572 1.07e-69 236
MS.gene51036.t1 MTR_3g100980 28.666 607 363 12 30 595 15 592 3.36e-67 230
MS.gene51036.t1 MTR_4g033385 31.264 435 277 6 149 576 37 456 2.48e-66 224
MS.gene51036.t1 MTR_4g123537 29.032 558 371 9 16 569 31 567 8.65e-65 224
MS.gene51036.t1 MTR_7g013270 27.451 561 386 11 17 569 76 623 8.74e-64 222
MS.gene51036.t1 MTR_8g087780 28.705 533 362 8 26 543 16 545 3.30e-62 216
MS.gene51036.t1 MTR_8g087810 29.104 536 357 10 26 543 16 546 9.56e-62 215
MS.gene51036.t1 MTR_7g098210 28.858 499 261 11 86 570 22 440 7.35e-57 198
MS.gene51036.t1 MTR_6g008690 28.468 555 330 16 48 575 24 538 8.36e-52 187
MS.gene51036.t1 MTR_7g052600 27.993 568 353 14 15 569 1 525 1.10e-49 181
MS.gene51036.t1 MTR_7g051880 28.144 501 308 12 76 569 70 525 9.40e-49 178
MS.gene51036.t1 MTR_1g009170 30.732 410 214 11 155 551 5 357 9.28e-48 172
MS.gene51036.t1 MTR_7g051830 27.523 545 355 11 26 569 20 525 1.37e-46 172
MS.gene51036.t1 MTR_4g024930 26.889 569 387 13 2 569 12 552 8.39e-46 171
MS.gene51036.t1 MTR_4g033310 26.957 345 224 7 241 574 162 489 2.62e-34 137
MS.gene51036.t1 MTR_4g033310 35.912 181 104 2 25 205 25 193 1.57e-24 107
MS.gene51036.t1 MTR_7g064160 54.945 91 41 0 25 115 23 113 4.04e-28 109
MS.gene51036.t1 MTR_8g091265 39.815 108 62 3 301 406 3 109 7.32e-18 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51036.t1 AT5G28470 56.738 564 236 7 15 575 1 559 0.0 666
MS.gene51036.t1 AT5G28470 56.383 564 236 7 15 575 1 557 0.0 658
MS.gene51036.t1 AT1G69870 41.480 581 318 8 26 598 46 612 1.82e-159 471
MS.gene51036.t1 AT1G27080 42.676 553 303 8 29 577 12 554 4.47e-151 447
MS.gene51036.t1 AT1G27080 42.802 521 284 8 61 577 2 512 5.99e-139 415
MS.gene51036.t1 AT1G18880 38.194 576 337 8 17 578 1 571 2.29e-138 416
MS.gene51036.t1 AT5G62680 38.849 556 324 6 34 577 46 597 5.54e-138 416
MS.gene51036.t1 AT3G47960 36.816 603 361 8 12 600 40 636 3.38e-135 409
MS.gene51036.t1 AT1G52190 34.106 604 374 13 16 601 7 604 1.70e-121 372
MS.gene51036.t1 AT1G69860 37.454 542 325 7 30 569 17 546 3.73e-119 365
MS.gene51036.t1 AT3G16180 35.058 599 358 13 11 593 3 586 6.56e-118 363
MS.gene51036.t1 AT3G54140 34.694 588 358 12 1 580 1 570 8.21e-115 354
MS.gene51036.t1 AT3G54140 34.694 588 358 12 1 580 1 570 8.21e-115 354
MS.gene51036.t1 AT5G01180 33.624 574 359 11 3 569 2 560 3.04e-106 332
MS.gene51036.t1 AT5G01180 33.624 574 359 11 3 569 2 560 3.04e-106 332
MS.gene51036.t1 AT5G01180 33.624 574 359 11 3 569 2 560 3.04e-106 332
MS.gene51036.t1 AT1G68570 34.464 560 355 6 29 580 21 576 9.99e-104 326
MS.gene51036.t1 AT2G02040 34.168 559 339 12 25 569 35 578 8.22e-102 321
MS.gene51036.t1 AT1G68570 34.615 546 345 6 43 580 5 546 8.31e-101 318
MS.gene51036.t1 AT1G62200 36.296 540 326 9 25 558 46 573 5.20e-100 316
MS.gene51036.t1 AT2G37900 32.995 591 367 10 1 583 1 570 1.64e-97 309
MS.gene51036.t1 AT1G62200 34.446 569 326 10 25 558 46 602 8.01e-94 301
MS.gene51036.t1 AT1G62200 34.446 569 326 10 25 558 60 616 1.26e-93 301
MS.gene51036.t1 AT3G53960 33.733 584 358 14 1 569 1 570 3.89e-93 299
MS.gene51036.t1 AT5G46050 32.796 558 350 8 3 552 4 544 8.54e-93 297
MS.gene51036.t1 AT3G54450 31.810 569 349 10 28 582 9 552 3.89e-92 295
MS.gene51036.t1 AT2G26690 33.212 548 352 8 17 562 13 548 5.91e-90 290
MS.gene51036.t1 AT1G22550 31.897 580 356 11 2 570 6 557 4.92e-89 287
MS.gene51036.t1 AT2G02020 31.949 554 323 9 25 571 36 542 5.71e-89 286
MS.gene51036.t1 AT3G45660 31.443 582 358 11 18 595 8 552 7.49e-89 286
MS.gene51036.t1 AT3G45660 31.443 582 358 11 18 595 8 552 7.49e-89 286
MS.gene51036.t1 AT3G45660 30.718 599 374 11 1 595 12 573 1.10e-88 286
MS.gene51036.t1 AT1G59740 31.598 557 365 7 23 575 36 580 1.34e-88 286
MS.gene51036.t1 AT2G37900 34.122 507 312 9 78 583 6 491 1.58e-88 283
MS.gene51036.t1 AT3G45680 30.085 585 374 10 18 601 8 558 4.51e-87 281
MS.gene51036.t1 AT1G33440 32.582 577 361 11 33 599 40 598 6.15e-87 282
MS.gene51036.t1 AT2G26690 33.908 522 334 7 43 562 3 515 4.69e-86 278
MS.gene51036.t1 AT5G46040 31.429 560 355 10 3 552 4 544 7.62e-86 279
MS.gene51036.t1 AT3G45650 31.443 582 368 11 10 587 2 556 7.62e-85 276
MS.gene51036.t1 AT3G21670 31.667 600 384 10 5 599 1 579 8.01e-85 276
MS.gene51036.t1 AT1G22540 32.264 561 344 10 17 570 19 550 3.02e-84 274
MS.gene51036.t1 AT3G45720 31.397 551 354 8 33 582 21 548 3.66e-84 274
MS.gene51036.t1 AT2G26690 33.789 512 328 7 53 562 1 503 4.15e-83 270
MS.gene51036.t1 AT2G40460 31.005 587 370 12 1 578 1 561 4.45e-83 272
MS.gene51036.t1 AT1G12110 31.453 585 369 11 27 600 23 586 3.37e-81 267
MS.gene51036.t1 AT3G45700 30.420 572 356 12 29 598 14 545 4.74e-81 265
MS.gene51036.t1 AT1G72125 30.189 583 357 10 8 570 2 554 8.95e-80 262
MS.gene51036.t1 AT1G22570 31.148 549 334 13 17 550 19 538 1.41e-79 262
MS.gene51036.t1 AT3G45650 30.099 608 368 12 10 587 2 582 4.63e-79 261
MS.gene51036.t1 AT1G72140 31.439 563 330 13 23 570 29 550 5.65e-78 258
MS.gene51036.t1 AT1G69850 31.306 559 353 8 33 569 27 576 2.37e-77 257
MS.gene51036.t1 AT3G45690 28.621 580 344 12 17 596 5 514 7.48e-77 253
MS.gene51036.t1 AT1G72130 31.171 555 333 10 26 572 20 533 1.42e-76 253
MS.gene51036.t1 AT1G32450 27.993 593 409 8 17 599 26 610 5.21e-76 254
MS.gene51036.t1 AT5G13400 30.175 570 368 11 27 578 60 617 5.78e-76 254
MS.gene51036.t1 AT3G45710 28.970 573 370 12 29 598 19 557 7.30e-75 249
MS.gene51036.t1 AT5G46050 34.009 444 273 7 117 552 1 432 8.69e-75 246
MS.gene51036.t1 AT2G02020 29.837 553 315 10 25 571 36 521 2.29e-73 244
MS.gene51036.t1 AT1G72120 29.401 568 352 10 17 570 18 550 6.00e-73 244
MS.gene51036.t1 AT4G21680 28.755 546 377 8 25 562 22 563 2.33e-72 243
MS.gene51036.t1 AT1G22570 30.725 524 322 12 42 550 4 501 6.94e-72 241
MS.gene51036.t1 AT1G27040 30.450 555 360 9 25 569 20 558 5.85e-71 239
MS.gene51036.t1 AT1G27040 30.450 555 360 9 25 569 16 554 6.52e-71 239
MS.gene51036.t1 AT5G19640 28.269 566 366 11 33 595 61 589 8.04e-69 234
MS.gene51036.t1 AT1G27040 30.712 534 345 8 45 569 9 526 1.03e-68 232
MS.gene51036.t1 AT5G62730 28.571 560 362 7 24 570 49 583 4.46e-65 224
MS.gene51036.t1 AT5G62730 28.519 547 353 7 37 570 3 524 7.14e-64 219
MS.gene51036.t1 AT3G25260 29.084 557 347 12 15 569 5 515 3.03e-63 217
MS.gene51036.t1 AT1G72130 31.746 441 265 8 140 572 3 415 2.47e-61 209
MS.gene51036.t1 AT1G72130 31.746 441 265 8 140 572 3 415 2.47e-61 209
MS.gene51036.t1 AT5G14940 27.719 570 367 12 30 580 6 549 5.21e-59 207
MS.gene51036.t1 AT3G25280 25.755 563 364 13 16 569 4 521 4.02e-53 190
MS.gene51036.t1 AT3G01350 27.051 573 366 11 36 579 12 561 1.57e-51 186
MS.gene51036.t1 AT5G11570 32.127 221 142 5 34 251 16 231 1.00e-30 126
MS.gene51036.t1 AT5G11570 31.687 243 157 4 321 562 235 469 1.26e-30 125
MS.gene51036.t1 AT2G38100 24.542 546 353 17 59 587 2 505 1.04e-24 108
MS.gene51036.t1 AT2G38100 24.542 546 353 17 59 587 18 521 1.48e-24 108
MS.gene51036.t1 AT2G38100 24.542 546 353 17 59 587 24 527 1.65e-24 108

Find 137 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGACATCGCTTTCATTT+TGG 0.146392 8.2:+18255804 MS.gene51036:CDS
ATGAACAATGTTGACAATTA+AGG 0.172737 8.2:-18256182 None:intergenic
GAGTCTATGAGGACGGTTTC+TGG 0.187073 8.2:+18256115 MS.gene51036:CDS
TAATGAGTCATTTGAGAAAT+TGG 0.224444 8.2:+18253880 MS.gene51036:CDS
TCAATAATCATCTTTCTATT+TGG 0.233061 8.2:+18255341 MS.gene51036:CDS
TAATGAGGATAATCAATAAA+AGG 0.244344 8.2:+18255858 MS.gene51036:CDS
AATTAGAGAGCTTCTTTAAT+TGG 0.245054 8.2:+18255204 MS.gene51036:CDS
CAGCTAGGAGTTCTATTTAC+AGG 0.245288 8.2:+18255083 MS.gene51036:CDS
CTTTGCTGCTGTTGCTATAA+TGG 0.251616 8.2:+18256069 MS.gene51036:CDS
TTATTGATTATCCTCATTAT+AGG 0.258228 8.2:-18255854 None:intergenic
ACTCCTAGCTGCCAATCTTT+TGG 0.277033 8.2:-18255071 None:intergenic
CCATTGGTGCTGGTGGAATT+AGG 0.281293 8.2:+18255120 MS.gene51036:CDS
TGGTTAATGTGGTGCAAATT+TGG 0.285525 8.2:+18253972 MS.gene51036:CDS
TTCATTTCTGATACTTATCT+TGG 0.291357 8.2:+18254031 MS.gene51036:CDS
ACTAATGTAAGCTGGACTTT+AGG 0.309412 8.2:+18255287 MS.gene51036:CDS
AGATGATGAGGAGAAGGTTT+TGG 0.315813 8.2:+18256420 MS.gene51036:CDS
CCTTGCCACTTCTCACATAA+TGG 0.316972 8.2:-18256339 None:intergenic
TCTCCATCCTCCTGCTTCTC+TGG 0.322425 8.2:-18253727 None:intergenic
ATACTTATCTTGGCCGGTTC+CGG 0.323101 8.2:+18254041 MS.gene51036:CDS
GGAGTTCTATTTACAGGTCT+TGG 0.337419 8.2:+18255089 MS.gene51036:CDS
CTGGATGAAGCTTCATTAGA+TGG 0.345535 8.2:-18253708 None:intergenic
ATACAAACTGATAGGTCTAT+TGG 0.348540 8.2:+18255740 MS.gene51036:CDS
TGTTTGGAATTCTACCAGTA+TGG 0.351509 8.2:+18255654 MS.gene51036:CDS
GAACACTTGAAATGCTTGTT+TGG 0.353749 8.2:+18255638 MS.gene51036:CDS
TGGTTGTATTGCATCACTTC+TGG 0.357555 8.2:+18254075 MS.gene51036:CDS
AATTTGTTGTTTCATTGTAA+TGG 0.359726 8.2:+18255685 MS.gene51036:CDS
CGGTTCCGGACCCTCCTATA+TGG 0.362580 8.2:+18254055 MS.gene51036:CDS
TGTCAGAATCAGAAAACATT+AGG 0.363031 8.2:+18255495 MS.gene51036:CDS
TTGCTGTGTTGGTGTCAAAT+TGG 0.373081 8.2:-18255169 None:intergenic
CATAAAGCAACATCACATAA+AGG 0.375246 8.2:+18256202 MS.gene51036:CDS
ATGGATCAGCAGAGCACATT+TGG 0.375422 8.2:+18255704 MS.gene51036:CDS
ATCATTATCATCACAGGTAA+TGG 0.377106 8.2:-18255030 None:intergenic
CAGGTTCAAGTTTCTTGATA+AGG 0.377319 8.2:+18255532 MS.gene51036:CDS
AGGCCTTGCAACATTGCATT+TGG 0.382877 8.2:+18255140 MS.gene51036:CDS
CCTTGGTTGTTCAATTCACT+TGG 0.383589 8.2:-18255572 None:intergenic
TTTATTTCGCCTGTGAGCTT+TGG 0.386566 8.2:+18256004 MS.gene51036:CDS
TCTCCCTTCACACTAGCAAT+AGG 0.388323 8.2:-18256385 None:intergenic
CAAATTCCTGTCACCCATAC+TGG 0.392266 8.2:-18255668 None:intergenic
ATGGGATGCAGAATCAGAAT+TGG 0.395520 8.2:+18255899 MS.gene51036:CDS
TTGCCGCAGTTTGCGCTGTC+CGG 0.400850 8.2:+18256034 MS.gene51036:CDS
ATGGCAATGCCTCATGTTCT+AGG 0.403384 8.2:-18253689 None:intergenic
GTTGTTCAATTCACTTGGTT+CGG 0.416383 8.2:-18255567 None:intergenic
AGCAAAGGCTTCATTTAAAC+CGG 0.416532 8.2:-18256053 None:intergenic
TATTATTTAATTGCTTCCAT+TGG 0.430317 8.2:+18256280 MS.gene51036:CDS
TCAAACATTGCATCATTAGT+TGG 0.432144 8.2:+18254004 MS.gene51036:CDS
AACCATTCTTAGCAATTCCT+TGG 0.434183 8.2:-18255589 None:intergenic
TGTTCTAGGTCGAGTGTAGA+AGG 0.441355 8.2:-18253675 None:intergenic
CATATAGGAGGGTCCGGAAC+CGG 0.441581 8.2:-18254054 None:intergenic
TTAGGCTTGTTCAGACAAAC+AGG 0.442906 8.2:+18255513 MS.gene51036:CDS
TCATTATCATCACAGGTAAT+GGG 0.445502 8.2:-18255029 None:intergenic
ATTGTCAACATCCAAAAGAT+TGG 0.446015 8.2:+18255060 MS.gene51036:CDS
CATCCAAAAGATTGGCAGCT+AGG 0.450802 8.2:+18255068 MS.gene51036:CDS
ATAAAGCAACATCACATAAA+GGG 0.462265 8.2:+18256203 MS.gene51036:CDS
AACTAATGATGCAATGTTTG+AGG 0.462398 8.2:-18254002 None:intergenic
TTTGACACCAACACAGCAAA+AGG 0.467559 8.2:+18255173 MS.gene51036:CDS
CAACCTGAGTGGAATATTTG+TGG 0.471616 8.2:+18253952 MS.gene51036:CDS
AATGAGGATAATCAATAAAA+GGG 0.479132 8.2:+18255859 MS.gene51036:CDS
GTTATCTATCTTATGTATGT+TGG 0.483048 8.2:+18255928 MS.gene51036:CDS
TAGAGAGCTTCTTTAATTGG+TGG 0.485786 8.2:+18255207 MS.gene51036:CDS
GTGATGCAATACAACCATAT+AGG 0.488324 8.2:-18254069 None:intergenic
ATTCTTTACCTTGCAAGTGC+CGG 0.491743 8.2:+18256093 MS.gene51036:CDS
GGACTATTATCCATTGGTGC+TGG 0.494849 8.2:+18255110 MS.gene51036:CDS
AGATCTGTTAAATATATCAT+TGG 0.495983 8.2:+18253747 MS.gene51036:CDS
TACAACCATATAGGAGGGTC+CGG 0.500785 8.2:-18254060 None:intergenic
CATTATAGCAACAGCAGCAA+AGG 0.502153 8.2:-18256068 None:intergenic
GAAGCTTCATCCAGAGAAGC+AGG 0.505889 8.2:+18253717 MS.gene51036:CDS
GTCAAGATTTAAATCATACT+AGG 0.509763 8.2:+18256245 MS.gene51036:CDS
TGGGATGCAGAATCAGAATT+GGG 0.510086 8.2:+18255900 MS.gene51036:CDS
CCTAATTCCACCAGCACCAA+TGG 0.510559 8.2:-18255120 None:intergenic
ATATTCAAACTAATGTAAGC+TGG 0.511736 8.2:+18255279 MS.gene51036:CDS
AAAGGGAAAACACCTTGGTT+AGG 0.511814 8.2:+18256220 MS.gene51036:CDS
ACATAGTAGGCACTAGATGA+AGG 0.514333 8.2:+18256443 MS.gene51036:CDS
ATTCTACCAGTATGGGTGAC+AGG 0.516346 8.2:+18255662 MS.gene51036:CDS
AACCAAGGAATTGCTAAGAA+TGG 0.517462 8.2:+18255587 MS.gene51036:CDS
TGCAAGTGCCGGAGTCTATG+AGG 0.529901 8.2:+18256104 MS.gene51036:CDS
ACTTTGTAGTTTGCAACAAG+TGG 0.530470 8.2:+18255616 MS.gene51036:CDS
GAGAAAATTCAAAACTCCAA+TGG 0.531965 8.2:-18256296 None:intergenic
GCACTTGTTATAGTACTCAC+TGG 0.533270 8.2:+18255248 MS.gene51036:CDS
TGGAATATTTGTGGTTAATG+TGG 0.535275 8.2:+18253961 MS.gene51036:CDS
AAGGAATTGCTAAGAATGGT+TGG 0.537199 8.2:+18255591 MS.gene51036:CDS
CATAGACTCCGGCACTTGCA+AGG 0.537689 8.2:-18256101 None:intergenic
GGATCCAGTGTAGTTTGCAA+TGG 0.538198 8.2:-18256161 None:intergenic
GGTCTTGGACTATTATCCAT+TGG 0.538384 8.2:+18255104 MS.gene51036:CDS
CTATTATCCATTGGTGCTGG+TGG 0.538784 8.2:+18255113 MS.gene51036:CDS
GTTTGGAATTCTACCAGTAT+GGG 0.540324 8.2:+18255655 MS.gene51036:CDS
CAACCTATTGCTAGTGTGAA+GGG 0.542349 8.2:+18256382 MS.gene51036:CDS
TTTCTGATACTTATCTTGGC+CGG 0.550033 8.2:+18254035 MS.gene51036:CDS
TACATTTACAAGAAACCTCA+AGG 0.551905 8.2:+18255374 MS.gene51036:CDS
TGAGAAGAATCGTCGTGACT+CGG 0.553085 8.2:+18255964 MS.gene51036:CDS
CATCCAGAGAAGCAGGAGGA+TGG 0.553260 8.2:+18253724 MS.gene51036:CDS
AGGTCTATCATTATCATCAC+AGG 0.553890 8.2:-18255036 None:intergenic
GGCTACAAGAAGAATGAGCA+TGG 0.556808 8.2:+18255880 MS.gene51036:CDS
GTATCTACCTTCCTATAATG+AGG 0.561820 8.2:+18255843 MS.gene51036:CDS
AATGTGGTGCAAATTTGGAA+TGG 0.564294 8.2:+18253977 MS.gene51036:CDS
AAGAGCAAACCAAAGCTCAC+AGG 0.565542 8.2:-18256013 None:intergenic
ACACCAACACAGCAAAAGGA+AGG 0.566907 8.2:+18255177 MS.gene51036:CDS
ATGCAATACAACCATATAGG+AGG 0.569522 8.2:-18254066 None:intergenic
TGAACAAGATGATGAGGAGA+AGG 0.569754 8.2:+18256414 MS.gene51036:CDS
CACATAAAGGGAAAACACCT+TGG 0.572816 8.2:+18256215 MS.gene51036:CDS
GGGAAAACACCTTGGTTAGG+TGG 0.573815 8.2:+18256223 MS.gene51036:CDS
GCACCAAATGCAATGTTGCA+AGG 0.574065 8.2:-18255143 None:intergenic
ACCAACACAGCAAAAGGAAG+GGG 0.574079 8.2:+18255179 MS.gene51036:CDS
TATACCAGCTGTTAATGTCA+TGG 0.582000 8.2:-18254994 None:intergenic
GCAACCTATTGCTAGTGTGA+AGG 0.582283 8.2:+18256381 MS.gene51036:CDS
CTTATGTATGTTGGTAGCTG+CGG 0.584666 8.2:+18255937 MS.gene51036:CDS
CACCAACACAGCAAAAGGAA+GGG 0.586077 8.2:+18255178 MS.gene51036:CDS
TTGTCCATTGCAAACTACAC+TGG 0.594811 8.2:+18256157 MS.gene51036:CDS
TTCAAGTTATACAAACTGAT+AGG 0.597569 8.2:+18255732 MS.gene51036:CDS
GTTCAAGTTTCTTGATAAGG+CGG 0.599661 8.2:+18255535 MS.gene51036:CDS
TTTAGGATTTGCAATTCCAA+CGG 0.600267 8.2:+18255304 MS.gene51036:CDS
TGATTATCCTCATTATAGGA+AGG 0.600926 8.2:-18255850 None:intergenic
ATCACATGAACAAGATGATG+AGG 0.603566 8.2:+18256408 MS.gene51036:CDS
TCTCACTTCAAAGTTCCACC+AGG 0.604976 8.2:+18255764 MS.gene51036:CDS
ATGACCATGACATTAACAGC+TGG 0.609508 8.2:+18254990 MS.gene51036:CDS
GCTTGCCATTATGTGAGAAG+TGG 0.613128 8.2:+18256334 MS.gene51036:CDS
CCATTATGTGAGAAGTGGCA+AGG 0.614875 8.2:+18256339 MS.gene51036:CDS
GAGTACTATAACAAGTGCAA+TGG 0.627454 8.2:-18255243 None:intergenic
GAGAAAGCAAGACAAACCGT+TGG 0.628071 8.2:-18255320 None:intergenic
ATCAAGTTCATCCACCCTGG+TGG 0.633435 8.2:-18255779 None:intergenic
AGGAAGCGTCTTTACAGACA+TGG 0.634742 8.2:+18255394 MS.gene51036:CDS
TAACCACAAATATTCCACTC+AGG 0.639567 8.2:-18253955 None:intergenic
TACACTCGACCTAGAACATG+AGG 0.646610 8.2:+18253680 MS.gene51036:CDS
TGCAATACAACCATATAGGA+GGG 0.648217 8.2:-18254065 None:intergenic
CGTCTTTACAGACATGGCAA+AGG 0.652076 8.2:+18255400 MS.gene51036:CDS
GCTACAAGAAGAATGAGCAT+GGG 0.656063 8.2:+18255881 MS.gene51036:CDS
GATATCAAGTTCATCCACCC+TGG 0.659106 8.2:-18255782 None:intergenic
CCAAGTGAATTGAACAACCA+AGG 0.659947 8.2:+18255572 MS.gene51036:CDS
AAATCTTGACCACCTAACCA+AGG 0.667278 8.2:-18256232 None:intergenic
ACTTCAAAGTTCCACCAGGG+TGG 0.672452 8.2:+18255768 MS.gene51036:CDS
AGTGCCGGAGTCTATGAGGA+CGG 0.673543 8.2:+18256108 MS.gene51036:CDS
GAAACCGTCCTCATAGACTC+CGG 0.680011 8.2:-18256112 None:intergenic
AAACCGGACAGCGCAAACTG+CGG 0.682652 8.2:-18256037 None:intergenic
CTAACAAAATACAACCTGAG+TGG 0.686497 8.2:+18253941 MS.gene51036:CDS
CAAGGAAATTGAGAAAGCTG+AGG 0.699712 8.2:+18256357 MS.gene51036:CDS
TCTGTAAAGACGCTTCCTTG+AGG 0.707148 8.2:-18255389 None:intergenic
CTCACTTCAAAGTTCCACCA+GGG 0.715731 8.2:+18255765 MS.gene51036:CDS
GCTTCATCCAGAGAAGCAGG+AGG 0.716276 8.2:+18253720 MS.gene51036:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTTTTATTA+AGG + chr8.2:18253857-18253876 MS.gene51036:intron 0.0%
!!! AAATGATATGTTTTATTAAG+TGG + chr8.2:18254249-18254268 MS.gene51036:intron 15.0%
!! AATGAGGATAATCAATAAAA+GGG + chr8.2:18255859-18255878 MS.gene51036:CDS 20.0%
!! AGATCTGTTAAATATATCAT+TGG + chr8.2:18253747-18253766 MS.gene51036:CDS 20.0%
!! CATAACTAACTTATTAACAT+GGG + chr8.2:18254783-18254802 MS.gene51036:intron 20.0%
!! TAATGAGGATAATCAATAAA+AGG + chr8.2:18255858-18255877 MS.gene51036:CDS 20.0%
!! TATTATTTAATTGCTTCCAT+TGG + chr8.2:18256280-18256299 MS.gene51036:CDS 20.0%
!! TCAATAATCATCTTTCTATT+TGG + chr8.2:18255341-18255360 MS.gene51036:CDS 20.0%
!! TCATAACTAACTTATTAACA+TGG + chr8.2:18254782-18254801 MS.gene51036:intron 20.0%
!! TTATATTGGATGGTTATTAT+AGG + chr8.2:18254817-18254836 MS.gene51036:intron 20.0%
!!! AATTTGTTGTTTCATTGTAA+TGG + chr8.2:18255685-18255704 MS.gene51036:CDS 20.0%
!!! TTATTGATTATCCTCATTAT+AGG - chr8.2:18255857-18255876 None:intergenic 20.0%
! AAAAGAATCAATCAAAACCT+TGG - chr8.2:18254884-18254903 None:intergenic 25.0%
! AACATGCACTACATATAAAT+AGG + chr8.2:18254694-18254713 MS.gene51036:intron 25.0%
! AATTAGAGAGCTTCTTTAAT+TGG + chr8.2:18255204-18255223 MS.gene51036:CDS 25.0%
! ATAAAGCAACATCACATAAA+GGG + chr8.2:18256203-18256222 MS.gene51036:CDS 25.0%
! ATATTCAAACTAATGTAAGC+TGG + chr8.2:18255279-18255298 MS.gene51036:CDS 25.0%
! ATGAACAATGTTGACAATTA+AGG - chr8.2:18256185-18256204 None:intergenic 25.0%
! CATGATTTCTTAACATTGTT+TGG + chr8.2:18253824-18253843 MS.gene51036:intron 25.0%
! GTCAAGATTTAAATCATACT+AGG + chr8.2:18256245-18256264 MS.gene51036:CDS 25.0%
! GTTATCTATCTTATGTATGT+TGG + chr8.2:18255928-18255947 MS.gene51036:CDS 25.0%
! GTTCATCAATTTATATTGGA+TGG + chr8.2:18254807-18254826 MS.gene51036:intron 25.0%
! TAATGAGTCATTTGAGAAAT+TGG + chr8.2:18253880-18253899 MS.gene51036:CDS 25.0%
! TGAATAAATACATGTATGCA+TGG - chr8.2:18254162-18254181 None:intergenic 25.0%
! TTCATTTCTGATACTTATCT+TGG + chr8.2:18254031-18254050 MS.gene51036:CDS 25.0%
!! TTCAAGTTATACAAACTGAT+AGG + chr8.2:18255732-18255751 MS.gene51036:CDS 25.0%
AACTAATGATGCAATGTTTG+AGG - chr8.2:18254005-18254024 None:intergenic 30.0%
ACATAGTAATAGGTACATGT+GGG - chr8.2:18254209-18254228 None:intergenic 30.0%
ATACAAACTGATAGGTCTAT+TGG + chr8.2:18255740-18255759 MS.gene51036:CDS 30.0%
ATCATTATCATCACAGGTAA+TGG - chr8.2:18255033-18255052 None:intergenic 30.0%
ATTGTCAACATCCAAAAGAT+TGG + chr8.2:18255060-18255079 MS.gene51036:CDS 30.0%
CATAAAGCAACATCACATAA+AGG + chr8.2:18256202-18256221 MS.gene51036:CDS 30.0%
CTGTTTCAAGACATAGTAAT+AGG - chr8.2:18254219-18254238 None:intergenic 30.0%
GAGAAAATTCAAAACTCCAA+TGG - chr8.2:18256299-18256318 None:intergenic 30.0%
GATATAAACATAACCAAGCT+TGG + chr8.2:18254947-18254966 MS.gene51036:intron 30.0%
GGGAGTTCATCAATTTATAT+TGG + chr8.2:18254803-18254822 MS.gene51036:intron 30.0%
TACATTTACAAGAAACCTCA+AGG + chr8.2:18255374-18255393 MS.gene51036:CDS 30.0%
TCAAACATTGCATCATTAGT+TGG + chr8.2:18254004-18254023 MS.gene51036:CDS 30.0%
TCATTATCATCACAGGTAAT+GGG - chr8.2:18255032-18255051 None:intergenic 30.0%
TGACTCATTAAGTAGATGTT+TGG + chr8.2:18254555-18254574 MS.gene51036:intron 30.0%
TGATTATCCTCATTATAGGA+AGG - chr8.2:18255853-18255872 None:intergenic 30.0%
TGGAATATTTGTGGTTAATG+TGG + chr8.2:18253961-18253980 MS.gene51036:CDS 30.0%
TGTCAGAATCAGAAAACATT+AGG + chr8.2:18255495-18255514 MS.gene51036:CDS 30.0%
! AAAGTGAGTCAATGTGATTT+TGG + chr8.2:18254602-18254621 MS.gene51036:intron 30.0%
! TCTTTTGGATGTTGACAATT+AGG - chr8.2:18255059-18255078 None:intergenic 30.0%
! TTTAGGATTTGCAATTCCAA+CGG + chr8.2:18255304-18255323 MS.gene51036:CDS 30.0%
AACCAAGGAATTGCTAAGAA+TGG + chr8.2:18255587-18255606 MS.gene51036:CDS 35.0%
AACCATTCTTAGCAATTCCT+TGG - chr8.2:18255592-18255611 None:intergenic 35.0%
AAGGAATTGCTAAGAATGGT+TGG + chr8.2:18255591-18255610 MS.gene51036:CDS 35.0%
AATGTGGTGCAAATTTGGAA+TGG + chr8.2:18253977-18253996 MS.gene51036:CDS 35.0%
ACTAATGTAAGCTGGACTTT+AGG + chr8.2:18255287-18255306 MS.gene51036:CDS 35.0%
AGCAAAGGCTTCATTTAAAC+CGG - chr8.2:18256056-18256075 None:intergenic 35.0%
AGGTCTATCATTATCATCAC+AGG - chr8.2:18255039-18255058 None:intergenic 35.0%
ATCACATGAACAAGATGATG+AGG + chr8.2:18256408-18256427 MS.gene51036:CDS 35.0%
ATGCAATACAACCATATAGG+AGG - chr8.2:18254069-18254088 None:intergenic 35.0%
CTAACAAAATACAACCTGAG+TGG + chr8.2:18253941-18253960 MS.gene51036:CDS 35.0%
GAACACTTGAAATGCTTGTT+TGG + chr8.2:18255638-18255657 MS.gene51036:CDS 35.0%
GACATAGTAATAGGTACATG+TGG - chr8.2:18254210-18254229 None:intergenic 35.0%
GAGTACTATAACAAGTGCAA+TGG - chr8.2:18255246-18255265 None:intergenic 35.0%
GTATCTACCTTCCTATAATG+AGG + chr8.2:18255843-18255862 MS.gene51036:CDS 35.0%
GTGATGCAATACAACCATAT+AGG - chr8.2:18254072-18254091 None:intergenic 35.0%
GTTGTTCAATTCACTTGGTT+CGG - chr8.2:18255570-18255589 None:intergenic 35.0%
TAACCACAAATATTCCACTC+AGG - chr8.2:18253958-18253977 None:intergenic 35.0%
TAGAGAGCTTCTTTAATTGG+TGG + chr8.2:18255207-18255226 MS.gene51036:CDS 35.0%
TATACCAGCTGTTAATGTCA+TGG - chr8.2:18254997-18255016 None:intergenic 35.0%
TGCAATACAACCATATAGGA+GGG - chr8.2:18254068-18254087 None:intergenic 35.0%
TGGTTAATGTGGTGCAAATT+TGG + chr8.2:18253972-18253991 MS.gene51036:CDS 35.0%
TGTCATATACAAACCAAGCT+TGG - chr8.2:18254963-18254982 None:intergenic 35.0%
TTTCTGATACTTATCTTGGC+CGG + chr8.2:18254035-18254054 MS.gene51036:CDS 35.0%
! ACTTTGTAGTTTGCAACAAG+TGG + chr8.2:18255616-18255635 MS.gene51036:CDS 35.0%
! CAATGACATCGCTTTCATTT+TGG + chr8.2:18255804-18255823 MS.gene51036:CDS 35.0%
! CAGGTTCAAGTTTCTTGATA+AGG + chr8.2:18255532-18255551 MS.gene51036:CDS 35.0%
! GTTCAAGTTTCTTGATAAGG+CGG + chr8.2:18255535-18255554 MS.gene51036:CDS 35.0%
! GTTTGGAATTCTACCAGTAT+GGG + chr8.2:18255655-18255674 MS.gene51036:CDS 35.0%
! TGTTTGGAATTCTACCAGTA+TGG + chr8.2:18255654-18255673 MS.gene51036:CDS 35.0%
! TTTTGGCAAAAGCTACACTT+TGG + chr8.2:18254619-18254638 MS.gene51036:intron 35.0%
!! AAGCTTGGTTTGTATATGAC+AGG + chr8.2:18254962-18254981 MS.gene51036:intron 35.0%
!! AGCTTGGTTTGTATATGACA+GGG + chr8.2:18254963-18254982 MS.gene51036:intron 35.0%
!! GACACTGATTCTTAGACAAA+GGG + chr8.2:18254524-18254543 MS.gene51036:intron 35.0%
!! TGACACTGATTCTTAGACAA+AGG + chr8.2:18254523-18254542 MS.gene51036:intron 35.0%
AAAGGGAAAACACCTTGGTT+AGG + chr8.2:18256220-18256239 MS.gene51036:CDS 40.0%
AAATCTTGACCACCTAACCA+AGG - chr8.2:18256235-18256254 None:intergenic 40.0%
AGCTAGCAAGCATTATACCA+AGG + chr8.2:18254864-18254883 MS.gene51036:intron 40.0%
ATGACCATGACATTAACAGC+TGG + chr8.2:18254990-18255009 MS.gene51036:CDS 40.0%
ATGGGATGCAGAATCAGAAT+TGG + chr8.2:18255899-18255918 MS.gene51036:CDS 40.0%
ATTCTTTACCTTGCAAGTGC+CGG + chr8.2:18256093-18256112 MS.gene51036:CDS 40.0%
CAACCTATTGCTAGTGTGAA+GGG + chr8.2:18256382-18256401 MS.gene51036:CDS 40.0%
CAACCTGAGTGGAATATTTG+TGG + chr8.2:18253952-18253971 MS.gene51036:CDS 40.0%
CAAGGAAATTGAGAAAGCTG+AGG + chr8.2:18256357-18256376 MS.gene51036:CDS 40.0%
CACATAAAGGGAAAACACCT+TGG + chr8.2:18256215-18256234 MS.gene51036:CDS 40.0%
CAGCTAGGAGTTCTATTTAC+AGG + chr8.2:18255083-18255102 MS.gene51036:CDS 40.0%
CATTATAGCAACAGCAGCAA+AGG - chr8.2:18256071-18256090 None:intergenic 40.0%
CCAAGTGAATTGAACAACCA+AGG + chr8.2:18255572-18255591 MS.gene51036:CDS 40.0%
CCTTGGTTGTTCAATTCACT+TGG - chr8.2:18255575-18255594 None:intergenic 40.0%
CTGGATGAAGCTTCATTAGA+TGG - chr8.2:18253711-18253730 None:intergenic 40.0%
CTTTGCTGCTGTTGCTATAA+TGG + chr8.2:18256069-18256088 MS.gene51036:CDS 40.0%
GCTACAAGAAGAATGAGCAT+GGG + chr8.2:18255881-18255900 MS.gene51036:CDS 40.0%
GGACAAGCTCAAAAAGAAGA+TGG - chr8.2:18256143-18256162 None:intergenic 40.0%
GGAGTTCTATTTACAGGTCT+TGG + chr8.2:18255089-18255108 MS.gene51036:CDS 40.0%
GGTCTTGGACTATTATCCAT+TGG + chr8.2:18255104-18255123 MS.gene51036:CDS 40.0%
GTAGTGCATGTTTATGATCG+CGG - chr8.2:18254686-18254705 None:intergenic 40.0%
TGAACAAGATGATGAGGAGA+AGG + chr8.2:18256414-18256433 MS.gene51036:CDS 40.0%
TGGGATGCAGAATCAGAATT+GGG + chr8.2:18255900-18255919 MS.gene51036:CDS 40.0%
TGGTTGTATTGCATCACTTC+TGG + chr8.2:18254075-18254094 MS.gene51036:CDS 40.0%
TTGTCCATTGCAAACTACAC+TGG + chr8.2:18256157-18256176 MS.gene51036:CDS 40.0%
TTTATTTCGCCTGTGAGCTT+TGG + chr8.2:18256004-18256023 MS.gene51036:CDS 40.0%
TTTGACACCAACACAGCAAA+AGG + chr8.2:18255173-18255192 MS.gene51036:CDS 40.0%
! AGATGATGAGGAGAAGGTTT+TGG + chr8.2:18256420-18256439 MS.gene51036:CDS 40.0%
! TTAGGCTTGTTCAGACAAAC+AGG + chr8.2:18255513-18255532 MS.gene51036:CDS 40.0%
!! CTTATGTATGTTGGTAGCTG+CGG + chr8.2:18255937-18255956 MS.gene51036:CDS 40.0%
!! GCACTTGTTATAGTACTCAC+TGG + chr8.2:18255248-18255267 MS.gene51036:CDS 40.0%
!! TTGCTGTGTTGGTGTCAAAT+TGG - chr8.2:18255172-18255191 None:intergenic 40.0%
!!! GAGAAGGTTTTGGACATAGT+AGG + chr8.2:18256430-18256449 MS.gene51036:CDS 40.0%
AACAAAATCACGGTGGTCTG+CGG - chr8.2:18254658-18254677 None:intergenic 45.0%
AAGAGCAAACCAAAGCTCAC+AGG - chr8.2:18256016-18256035 None:intergenic 45.0%
ACACCAACACAGCAAAAGGA+AGG + chr8.2:18255177-18255196 MS.gene51036:CDS 45.0%
ACCAACACAGCAAAAGGAAG+GGG + chr8.2:18255179-18255198 MS.gene51036:CDS 45.0%
AGGCCTTGCAACATTGCATT+TGG + chr8.2:18255140-18255159 MS.gene51036:CDS 45.0%
ATGGATCAGCAGAGCACATT+TGG + chr8.2:18255704-18255723 MS.gene51036:CDS 45.0%
ATGGCAATGCCTCATGTTCT+AGG - chr8.2:18253692-18253711 None:intergenic 45.0%
ATTCTACCAGTATGGGTGAC+AGG + chr8.2:18255662-18255681 MS.gene51036:CDS 45.0%
CAAATTCCTGTCACCCATAC+TGG - chr8.2:18255671-18255690 None:intergenic 45.0%
CACCAACACAGCAAAAGGAA+GGG + chr8.2:18255178-18255197 MS.gene51036:CDS 45.0%
CATCCAAAAGATTGGCAGCT+AGG + chr8.2:18255068-18255087 MS.gene51036:CDS 45.0%
CCATTATGTGAGAAGTGGCA+AGG + chr8.2:18256339-18256358 MS.gene51036:CDS 45.0%
CGCGGTAACCAACAAAATCA+CGG - chr8.2:18254668-18254687 None:intergenic 45.0%
CGTCTTTACAGACATGGCAA+AGG + chr8.2:18255400-18255419 MS.gene51036:CDS 45.0%
CTCACTTCAAAGTTCCACCA+GGG + chr8.2:18255765-18255784 MS.gene51036:CDS 45.0%
GAGAAAGCAAGACAAACCGT+TGG - chr8.2:18255323-18255342 None:intergenic 45.0%
GATATCAAGTTCATCCACCC+TGG - chr8.2:18255785-18255804 None:intergenic 45.0%
GCAACCTATTGCTAGTGTGA+AGG + chr8.2:18256381-18256400 MS.gene51036:CDS 45.0%
GCACCAAATGCAATGTTGCA+AGG - chr8.2:18255146-18255165 None:intergenic 45.0%
GCTTGCCATTATGTGAGAAG+TGG + chr8.2:18256334-18256353 MS.gene51036:CDS 45.0%
GGACTATTATCCATTGGTGC+TGG + chr8.2:18255110-18255129 MS.gene51036:CDS 45.0%
GGCTACAAGAAGAATGAGCA+TGG + chr8.2:18255880-18255899 MS.gene51036:CDS 45.0%
GGTAACCAACAAAATCACGG+TGG - chr8.2:18254665-18254684 None:intergenic 45.0%
TACAACCATATAGGAGGGTC+CGG - chr8.2:18254063-18254082 None:intergenic 45.0%
TACACTCGACCTAGAACATG+AGG + chr8.2:18253680-18253699 MS.gene51036:CDS 45.0%
TCTCACTTCAAAGTTCCACC+AGG + chr8.2:18255764-18255783 MS.gene51036:CDS 45.0%
TCTCCCTTCACACTAGCAAT+AGG - chr8.2:18256388-18256407 None:intergenic 45.0%
TCTGTAAAGACGCTTCCTTG+AGG - chr8.2:18255392-18255411 None:intergenic 45.0%
TGAGAAGAATCGTCGTGACT+CGG + chr8.2:18255964-18255983 MS.gene51036:CDS 45.0%
! ACTCCTAGCTGCCAATCTTT+TGG - chr8.2:18255074-18255093 None:intergenic 45.0%
! ATACTTATCTTGGCCGGTTC+CGG + chr8.2:18254041-18254060 MS.gene51036:CDS 45.0%
! CCTTGCCACTTCTCACATAA+TGG - chr8.2:18256342-18256361 None:intergenic 45.0%
! GGATCCAGTGTAGTTTGCAA+TGG - chr8.2:18256164-18256183 None:intergenic 45.0%
! TGTTCTAGGTCGAGTGTAGA+AGG - chr8.2:18253678-18253697 None:intergenic 45.0%
!! AGGAAGCGTCTTTACAGACA+TGG + chr8.2:18255394-18255413 MS.gene51036:CDS 45.0%
!! CTATTATCCATTGGTGCTGG+TGG + chr8.2:18255113-18255132 MS.gene51036:CDS 45.0%
ACTTCAAAGTTCCACCAGGG+TGG + chr8.2:18255768-18255787 MS.gene51036:CDS 50.0%
ATCAAGTTCATCCACCCTGG+TGG - chr8.2:18255782-18255801 None:intergenic 50.0%
CCTAATTCCACCAGCACCAA+TGG - chr8.2:18255123-18255142 None:intergenic 50.0%
GAAACCGTCCTCATAGACTC+CGG - chr8.2:18256115-18256134 None:intergenic 50.0%
GAAGCTTCATCCAGAGAAGC+AGG + chr8.2:18253717-18253736 MS.gene51036:CDS 50.0%
GAGTCTATGAGGACGGTTTC+TGG + chr8.2:18256115-18256134 MS.gene51036:CDS 50.0%
GGGAAAACACCTTGGTTAGG+TGG + chr8.2:18256223-18256242 MS.gene51036:CDS 50.0%
! GCAGACCACCGTGATTTTGT+TGG + chr8.2:18254657-18254676 MS.gene51036:intron 50.0%
!! CCATTGGTGCTGGTGGAATT+AGG + chr8.2:18255120-18255139 MS.gene51036:CDS 50.0%
!! TCCCCTTCCTTTTGCTGTGT+TGG - chr8.2:18255183-18255202 None:intergenic 50.0%
AAACCGGACAGCGCAAACTG+CGG - chr8.2:18256040-18256059 None:intergenic 55.0%
CATAGACTCCGGCACTTGCA+AGG - chr8.2:18256104-18256123 None:intergenic 55.0%
CATATAGGAGGGTCCGGAAC+CGG - chr8.2:18254057-18254076 None:intergenic 55.0%
CATCCAGAGAAGCAGGAGGA+TGG + chr8.2:18253724-18253743 MS.gene51036:CDS 55.0%
GCTTCATCCAGAGAAGCAGG+AGG + chr8.2:18253720-18253739 MS.gene51036:CDS 55.0%
TCTCCATCCTCCTGCTTCTC+TGG - chr8.2:18253730-18253749 None:intergenic 55.0%
! AGTGCCGGAGTCTATGAGGA+CGG + chr8.2:18256108-18256127 MS.gene51036:CDS 55.0%
!! TGCAAGTGCCGGAGTCTATG+AGG + chr8.2:18256104-18256123 MS.gene51036:CDS 55.0%
CGGTTCCGGACCCTCCTATA+TGG + chr8.2:18254055-18254074 MS.gene51036:CDS 60.0%
TTGCCGCAGTTTGCGCTGTC+CGG + chr8.2:18256034-18256053 MS.gene51036:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 18253642 18256462 18253642 ID=MS.gene51036
chr8.2 mRNA 18253642 18256462 18253642 ID=MS.gene51036.t1;Parent=MS.gene51036
chr8.2 exon 18253642 18253768 18253642 ID=MS.gene51036.t1.exon1;Parent=MS.gene51036.t1
chr8.2 CDS 18253642 18253768 18253642 ID=cds.MS.gene51036.t1;Parent=MS.gene51036.t1
chr8.2 exon 18253879 18254096 18253879 ID=MS.gene51036.t1.exon2;Parent=MS.gene51036.t1
chr8.2 CDS 18253879 18254096 18253879 ID=cds.MS.gene51036.t1;Parent=MS.gene51036.t1
chr8.2 exon 18254984 18256462 18254984 ID=MS.gene51036.t1.exon3;Parent=MS.gene51036.t1
chr8.2 CDS 18254984 18256462 18254984 ID=cds.MS.gene51036.t1;Parent=MS.gene51036.t1
Gene Sequence

>MS.gene51036

ATGGAGGAGAATGTTGTGAACACAAATTCTTCTCCTTCTACACTCGACCTAGAACATGAGGCATTGCCATCTAATGAAGCTTCATCCAGAGAAGCAGGAGGATGGAGATCTGTTAAATATATCATTGGTAAATATGTTTTCTACATTAATTAATTATAATCATTAATGTTGTTACAAGCATGCATGATTTCTTAACATTGTTTGGTTTTTATTAAATTTTTTATTTTTTTTATTAAGGTAATGAGTCATTTGAGAAATTGGCATCGATGAGTTTGATATCAAATCTAACAGTGTATCTTCTAACAAAATACAACCTGAGTGGAATATTTGTGGTTAATGTGGTGCAAATTTGGAATGGATCCTCAAACATTGCATCATTAGTTGGTGCTTTCATTTCTGATACTTATCTTGGCCGGTTCCGGACCCTCCTATATGGTTGTATTGCATCACTTCTGGTAATTTTTTGCATCTGACTCTTTATTTTCATTTTTGTTCTTCTTCATTAATTAACAATTTGCCATGCATACATGTATTTATTCATTATCATTTTTTCATTCTTGAATTCCCACATGTACCTATTACTATGTCTTGAAACAGAAATAAAGAAAAATGATATGTTTTATTAAGTGGTTTATACATATTTCTTACAAAAACTATTGAGTGTACTAATTTTTATGAGATAATGAAATTTATTTACTAAAGAACTCTTATTAATGATATTAGTGAAATTTATCGAAAAAGAGAGACTATATTAGTAGAAGAAAGTAATTAATAATTCAATGTTGTTGTTGTTGTTATTATTATTATCATTATTATTTGTTACATACTTGAATGATATTCTGAAACAACAAATAATATGACAAAAGCAAATTTTTCATGTGTGACACTGATTCTTAGACAAAGGGAGTAGTAGTGACTCATTAAGTAGATGTTTGGATTGACATTGAGTTAAATAGAATCAAAGTGAGTCAATGTGATTTTGGCAAAAGCTACACTTTGGAGCTTCAAGAAAACCGCAGACCACCGTGATTTTGTTGGTTACCGCGATCATAAACATGCACTACATATAAATAGGAAGTTGTAACTAATGTAATCATAACTGACTAATTAACATGTCAGTTTCATCAATTTATATTGTAATCATAACTAACTTATTAACATGGGAGTTCATCAATTTATATTGGATGGTTATTATAGGAATCATATGTTAATACTGTGATTGAGCTAGCAAGCATTATACCAAGGTTTTGATTGATTCTTTTATTTATTCACTTGATTTTTTATTTAACATGTAAGAATGCACATGATATAAACATAACCAAGCTTGGTTTGTATATGACAGGGTATAATGACCATGACATTAACAGCTGGTATACATCAATTAAGACCCATTACCTGTGATGATAATGATAGACCTAATTGTCAACATCCAAAAGATTGGCAGCTAGGAGTTCTATTTACAGGTCTTGGACTATTATCCATTGGTGCTGGTGGAATTAGGCCTTGCAACATTGCATTTGGTGCTGACCAATTTGACACCAACACAGCAAAAGGAAGGGGACAATTAGAGAGCTTCTTTAATTGGTGGTATTTCACTTTCACCATTGCACTTGTTATAGTACTCACTGGTGTTGTCTATATTCAAACTAATGTAAGCTGGACTTTAGGATTTGCAATTCCAACGGTTTGTCTTGCTTTCTCAATAATCATCTTTCTATTTGGTCGCGACACTTACATTTACAAGAAACCTCAAGGAAGCGTCTTTACAGACATGGCAAAGGTGATCGTTGCAGCATGTCGAAAACGCAAACTTCAACTTTCAAATAGAACTTTATATGATCATGTTTCTACATTGTCAGAATCAGAAAACATTAGGCTTGTTCAGACAAACAGGTTCAAGTTTCTTGATAAGGCGGCTATAATAGCCGAACCAAGTGAATTGAACAACCAAGGAATTGCTAAGAATGGTTGGAGACTTTGTAGTTTGCAACAAGTGGAACACTTGAAATGCTTGTTTGGAATTCTACCAGTATGGGTGACAGGAATTTGTTGTTTCATTGTAATGGATCAGCAGAGCACATTTGGTGTGCTTCAAGTTATACAAACTGATAGGTCTATTGGATCTCACTTCAAAGTTCCACCAGGGTGGATGAACTTGATATCAATGACATCGCTTTCATTTTGGATATGCATTTATGAGTGTATCTACCTTCCTATAATGAGGATAATCAATAAAAGGGCTACAAGAAGAATGAGCATGGGATGCAGAATCAGAATTGGGATATTGTTATCTATCTTATGTATGTTGGTAGCTGCGGTTGTTGAGAAGAATCGTCGTGACTCGGCATTGAAATACAACTCGTTTATTTCGCCTGTGAGCTTTGGTTTGCTCTTGCCGCAGTTTGCGCTGTCCGGTTTAAATGAAGCCTTTGCTGCTGTTGCTATAATGGAATTCTTTACCTTGCAAGTGCCGGAGTCTATGAGGACGGTTTCTGGTGCCATCTTCTTTTTGAGCTTGTCCATTGCAAACTACACTGGATCCTTAATTGTCAACATTGTTCATAAAGCAACATCACATAAAGGGAAAACACCTTGGTTAGGTGGTCAAGATTTAAATCATACTAGGCTTGATTACTATTATTATTTAATTGCTTCCATTGGAGTTTTGAATTTTCTCTATTTCAATTTCTTTGCTTGCCATTATGTGAGAAGTGGCAAGGAAATTGAGAAAGCTGAGGTGCAACCTATTGCTAGTGTGAAGGGAGAATCACATGAACAAGATGATGAGGAGAAGGTTTTGGACATAGTAGGCACTAGATGA
Protein sequence

>MS.gene51036.t1

MEENVVNTNSSPSTLDLEHEALPSNEASSREAGGWRSVKYIIGNESFEKLASMSLISNLTVYLLTKYNLSGIFVVNVVQIWNGSSNIASLVGAFISDTYLGRFRTLLYGCIASLLGIMTMTLTAGIHQLRPITCDDNDRPNCQHPKDWQLGVLFTGLGLLSIGAGGIRPCNIAFGADQFDTNTAKGRGQLESFFNWWYFTFTIALVIVLTGVVYIQTNVSWTLGFAIPTVCLAFSIIIFLFGRDTYIYKKPQGSVFTDMAKVIVAACRKRKLQLSNRTLYDHVSTLSESENIRLVQTNRFKFLDKAAIIAEPSELNNQGIAKNGWRLCSLQQVEHLKCLFGILPVWVTGICCFIVMDQQSTFGVLQVIQTDRSIGSHFKVPPGWMNLISMTSLSFWICIYECIYLPIMRIINKRATRRMSMGCRIRIGILLSILCMLVAAVVEKNRRDSALKYNSFISPVSFGLLLPQFALSGLNEAFAAVAIMEFFTLQVPESMRTVSGAIFFLSLSIANYTGSLIVNIVHKATSHKGKTPWLGGQDLNHTRLDYYYYLIASIGVLNFLYFNFFACHYVRSGKEIEKAEVQPIASVKGESHEQDDEEKVLDIVGTR