Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51128.t1 | XP_003591862.2 | 96.2 | 970 | 30 | 3 | 1 | 968 | 1 | 965 | 0.00E+00 | 1295 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51128.t1 | Q9SS47 | 51.3 | 1005 | 399 | 23 | 16 | 968 | 21 | 987 | 3.7e-105 | 384.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51128.t1 | G7I500 | 96.2 | 970 | 30 | 3 | 1 | 968 | 1 | 965 | 0.0e+00 | 1295.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene51128 | MS.gene021152 | PPI |
MS.gene45531 | MS.gene51128 | PPI |
MS.gene052079 | MS.gene51128 | PPI |
MS.gene30563 | MS.gene51128 | PPI |
MS.gene31118 | MS.gene51128 | PPI |
MS.gene51128 | MS.gene41135 | PPI |
MS.gene51128 | MS.gene78407 | PPI |
MS.gene004005 | MS.gene51128 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51128.t1 | MTR_1g094630 | 95.876 | 970 | 33 | 3 | 1 | 968 | 1 | 965 | 0.0 | 1916 |
MS.gene51128.t1 | MTR_1g094630 | 95.277 | 847 | 33 | 3 | 1 | 845 | 1 | 842 | 0.0 | 1643 |
MS.gene51128.t1 | MTR_1g094630 | 30.097 | 206 | 138 | 2 | 718 | 923 | 643 | 842 | 5.31e-23 | 105 |
MS.gene51128.t1 | MTR_1g094630 | 29.379 | 177 | 118 | 2 | 785 | 961 | 638 | 807 | 5.06e-19 | 93.2 |
MS.gene51128.t1 | MTR_1g094630 | 27.619 | 210 | 142 | 5 | 751 | 958 | 640 | 841 | 8.48e-17 | 85.9 |
MS.gene51128.t1 | MTR_1g094630 | 94.730 | 740 | 32 | 3 | 1 | 738 | 32 | 766 | 0.0 | 1419 |
MS.gene51128.t1 | MTR_4g064670 | 48.864 | 968 | 430 | 25 | 21 | 968 | 20 | 942 | 0.0 | 791 |
MS.gene51128.t1 | MTR_4g064670 | 47.707 | 1025 | 428 | 29 | 21 | 968 | 20 | 1013 | 0.0 | 790 |
MS.gene51128.t1 | MTR_2g097670 | 46.065 | 1042 | 447 | 23 | 18 | 968 | 18 | 1035 | 0.0 | 763 |
MS.gene51128.t1 | MTR_5g080390 | 44.115 | 1011 | 442 | 23 | 34 | 968 | 32 | 995 | 0.0 | 727 |
MS.gene51128.t1 | MTR_5g080390 | 44.027 | 452 | 173 | 4 | 523 | 894 | 548 | 999 | 1.02e-114 | 377 |
MS.gene51128.t1 | MTR_2g097670 | 41.567 | 919 | 422 | 23 | 18 | 845 | 18 | 912 | 0.0 | 550 |
MS.gene51128.t1 | MTR_2g097670 | 28.249 | 177 | 120 | 2 | 785 | 961 | 708 | 877 | 1.55e-18 | 91.7 |
MS.gene51128.t1 | MTR_2g036900 | 53.589 | 418 | 186 | 3 | 550 | 962 | 559 | 973 | 2.75e-150 | 471 |
MS.gene51128.t1 | MTR_2g036900 | 53.151 | 365 | 163 | 3 | 550 | 909 | 559 | 920 | 2.20e-125 | 403 |
MS.gene51128.t1 | MTR_2g036900 | 28.854 | 253 | 171 | 4 | 710 | 961 | 650 | 894 | 3.73e-27 | 119 |
MS.gene51128.t1 | MTR_2g008770 | 33.871 | 310 | 196 | 5 | 654 | 959 | 435 | 739 | 3.98e-49 | 187 |
MS.gene51128.t1 | MTR_2g008770 | 23.611 | 216 | 163 | 2 | 650 | 863 | 506 | 721 | 2.78e-15 | 80.9 |
MS.gene51128.t1 | MTR_5g063650 | 33.230 | 322 | 204 | 6 | 643 | 960 | 393 | 707 | 2.72e-47 | 181 |
MS.gene51128.t1 | MTR_8g022680 | 77.049 | 122 | 21 | 2 | 535 | 656 | 18 | 132 | 7.25e-45 | 159 |
MS.gene51128.t1 | MTR_5g062070 | 28.782 | 271 | 183 | 5 | 678 | 944 | 21 | 285 | 4.07e-29 | 120 |
MS.gene51128.t1 | MTR_5g062070 | 23.077 | 273 | 191 | 6 | 586 | 849 | 6 | 268 | 6.99e-12 | 68.6 |
MS.gene51128.t1 | MTR_3g102650 | 28.723 | 282 | 190 | 5 | 650 | 926 | 216 | 491 | 1.28e-28 | 122 |
MS.gene51128.t1 | MTR_1g106975 | 27.900 | 319 | 215 | 7 | 650 | 959 | 136 | 448 | 2.31e-28 | 120 |
MS.gene51128.t1 | MTR_1g106975 | 23.246 | 228 | 162 | 3 | 706 | 926 | 120 | 341 | 6.77e-13 | 72.4 |
MS.gene51128.t1 | MTR_2g006930 | 24.606 | 317 | 228 | 5 | 650 | 959 | 109 | 421 | 9.44e-27 | 115 |
MS.gene51128.t1 | MTR_1g100230 | 26.087 | 322 | 216 | 9 | 650 | 959 | 94 | 405 | 4.95e-25 | 109 |
MS.gene51128.t1 | MTR_2g006940 | 22.603 | 292 | 177 | 8 | 650 | 921 | 116 | 378 | 1.96e-13 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51128.t1 | AT3G10360 | 51.041 | 1009 | 396 | 26 | 16 | 968 | 21 | 987 | 0.0 | 884 |
MS.gene51128.t1 | AT2G29140 | 44.202 | 1009 | 427 | 27 | 18 | 968 | 19 | 949 | 0.0 | 721 |
MS.gene51128.t1 | AT2G29140 | 25.170 | 294 | 173 | 5 | 621 | 868 | 671 | 963 | 3.37e-22 | 103 |
MS.gene51128.t1 | AT2G29140 | 44.202 | 1009 | 427 | 27 | 18 | 968 | 19 | 949 | 0.0 | 721 |
MS.gene51128.t1 | AT2G29140 | 25.170 | 294 | 173 | 5 | 621 | 868 | 671 | 963 | 3.37e-22 | 103 |
MS.gene51128.t1 | AT2G29200 | 43.781 | 1005 | 442 | 28 | 18 | 968 | 18 | 953 | 0.0 | 699 |
MS.gene51128.t1 | AT2G29200 | 26.990 | 289 | 164 | 5 | 621 | 863 | 675 | 962 | 1.52e-24 | 111 |
MS.gene51128.t1 | AT2G29200 | 43.781 | 1005 | 442 | 28 | 18 | 968 | 18 | 953 | 0.0 | 699 |
MS.gene51128.t1 | AT2G29200 | 26.990 | 289 | 164 | 5 | 621 | 863 | 675 | 962 | 1.52e-24 | 111 |
MS.gene51128.t1 | AT2G29190 | 62.931 | 464 | 157 | 7 | 508 | 968 | 506 | 957 | 0.0 | 592 |
MS.gene51128.t1 | AT2G29190 | 62.931 | 464 | 157 | 7 | 508 | 968 | 506 | 957 | 0.0 | 592 |
MS.gene51128.t1 | AT3G20250 | 61.538 | 338 | 130 | 0 | 628 | 965 | 563 | 900 | 8.37e-147 | 459 |
MS.gene51128.t1 | AT3G20250 | 34.646 | 127 | 67 | 2 | 50 | 172 | 59 | 173 | 3.65e-11 | 67.8 |
MS.gene51128.t1 | AT3G20250 | 61.538 | 338 | 130 | 0 | 628 | 965 | 599 | 936 | 1.42e-146 | 460 |
MS.gene51128.t1 | AT3G20250 | 32.468 | 154 | 84 | 4 | 50 | 195 | 59 | 200 | 4.05e-11 | 67.8 |
MS.gene51128.t1 | AT3G20250 | 61.538 | 338 | 130 | 0 | 628 | 965 | 599 | 936 | 1.42e-146 | 460 |
MS.gene51128.t1 | AT3G20250 | 32.468 | 154 | 84 | 4 | 50 | 195 | 59 | 200 | 4.05e-11 | 67.8 |
MS.gene51128.t1 | AT4G25880 | 60.119 | 336 | 132 | 2 | 629 | 963 | 516 | 850 | 1.39e-137 | 434 |
MS.gene51128.t1 | AT4G25880 | 60.119 | 336 | 132 | 2 | 629 | 963 | 516 | 850 | 1.39e-137 | 434 |
MS.gene51128.t1 | AT4G25880 | 60.119 | 336 | 132 | 2 | 629 | 963 | 516 | 850 | 1.74e-137 | 434 |
MS.gene51128.t1 | AT4G25880 | 58.929 | 336 | 130 | 3 | 629 | 963 | 516 | 844 | 6.87e-132 | 419 |
MS.gene51128.t1 | AT4G25880 | 58.929 | 336 | 130 | 3 | 629 | 963 | 516 | 844 | 8.19e-132 | 418 |
MS.gene51128.t1 | AT1G22240 | 32.219 | 329 | 211 | 7 | 636 | 960 | 190 | 510 | 1.39e-51 | 190 |
MS.gene51128.t1 | AT1G22240 | 26.800 | 250 | 174 | 3 | 715 | 961 | 196 | 439 | 3.66e-23 | 105 |
MS.gene51128.t1 | AT1G78160 | 31.889 | 323 | 207 | 7 | 643 | 960 | 331 | 645 | 2.09e-48 | 183 |
MS.gene51128.t1 | AT1G78160 | 31.889 | 323 | 207 | 7 | 643 | 960 | 333 | 647 | 2.21e-48 | 183 |
MS.gene51128.t1 | AT5G56510 | 30.573 | 314 | 209 | 4 | 650 | 959 | 282 | 590 | 3.17e-45 | 173 |
MS.gene51128.t1 | AT5G56510 | 29.814 | 161 | 111 | 1 | 649 | 807 | 429 | 589 | 2.72e-14 | 77.4 |
MS.gene51128.t1 | AT5G56510 | 30.573 | 314 | 209 | 4 | 650 | 959 | 282 | 590 | 3.17e-45 | 173 |
MS.gene51128.t1 | AT5G56510 | 29.814 | 161 | 111 | 1 | 649 | 807 | 429 | 589 | 2.72e-14 | 77.4 |
MS.gene51128.t1 | AT5G56510 | 30.573 | 314 | 209 | 4 | 650 | 959 | 282 | 590 | 3.17e-45 | 173 |
MS.gene51128.t1 | AT5G56510 | 29.814 | 161 | 111 | 1 | 649 | 807 | 429 | 589 | 2.72e-14 | 77.4 |
MS.gene51128.t1 | AT5G56510 | 30.573 | 314 | 209 | 4 | 650 | 959 | 282 | 590 | 3.17e-45 | 173 |
MS.gene51128.t1 | AT5G56510 | 29.814 | 161 | 111 | 1 | 649 | 807 | 429 | 589 | 2.72e-14 | 77.4 |
MS.gene51128.t1 | AT5G56510 | 30.573 | 314 | 209 | 4 | 650 | 959 | 282 | 590 | 3.17e-45 | 173 |
MS.gene51128.t1 | AT5G56510 | 29.814 | 161 | 111 | 1 | 649 | 807 | 429 | 589 | 2.72e-14 | 77.4 |
MS.gene51128.t1 | AT4G08840 | 32.229 | 332 | 209 | 8 | 636 | 960 | 229 | 551 | 4.07e-43 | 166 |
MS.gene51128.t1 | AT5G56510 | 31.206 | 282 | 185 | 4 | 650 | 927 | 282 | 558 | 4.86e-41 | 160 |
MS.gene51128.t1 | AT5G56510 | 29.952 | 207 | 143 | 2 | 650 | 854 | 357 | 563 | 3.54e-17 | 86.7 |
MS.gene51128.t1 | AT5G56510 | 32.308 | 130 | 86 | 1 | 649 | 776 | 429 | 558 | 7.37e-12 | 69.7 |
MS.gene51128.t1 | AT1G35750 | 31.070 | 383 | 226 | 12 | 586 | 960 | 171 | 523 | 2.11e-40 | 157 |
MS.gene51128.t1 | AT1G35730 | 29.448 | 326 | 214 | 7 | 643 | 960 | 247 | 564 | 6.88e-40 | 156 |
MS.gene51128.t1 | AT1G35730 | 29.448 | 326 | 214 | 7 | 643 | 960 | 253 | 570 | 8.80e-40 | 156 |
MS.gene51128.t1 | AT5G43090 | 18.892 | 397 | 285 | 7 | 582 | 961 | 149 | 525 | 2.05e-18 | 90.5 |
MS.gene51128.t1 | AT5G43110 | 19.811 | 318 | 237 | 7 | 653 | 961 | 208 | 516 | 3.08e-13 | 73.9 |
MS.gene51128.t1 | AT4G08560 | 23.860 | 285 | 193 | 8 | 654 | 923 | 159 | 434 | 6.11e-13 | 72.8 |
MS.gene51128.t1 | AT5G59280 | 21.827 | 197 | 150 | 2 | 731 | 927 | 96 | 288 | 8.06e-12 | 68.2 |
MS.gene51128.t1 | AT5G09610 | 25.888 | 197 | 136 | 4 | 764 | 960 | 304 | 490 | 8.40e-12 | 69.3 |
MS.gene51128.t1 | AT1G35850 | 23.810 | 231 | 159 | 6 | 731 | 956 | 21 | 239 | 2.18e-11 | 65.9 |
MS.gene51128.t1 | AT1G35850 | 25.253 | 198 | 132 | 5 | 764 | 956 | 100 | 286 | 5.27e-11 | 65.5 |
Find 215 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTAATCAAGGGTTATT+TGG | 0.132275 | 1.2:+74047768 | MS.gene51128:CDS |
GAATAACATGGTTTCCATTT+TGG | 0.169291 | 1.2:-74049031 | None:intergenic |
TCCTGAAGAACGTCAAATTT+TGG | 0.213447 | 1.2:+74051657 | MS.gene51128:CDS |
GCACTTTCTACTCATCCTTA+TGG | 0.221018 | 1.2:+74049125 | MS.gene51128:CDS |
CGATCAAATGTGCATTCTTC+TGG | 0.224716 | 1.2:+74047232 | MS.gene51128:CDS |
TTCCGTAAGTGTATCGCTTC+AGG | 0.231991 | 1.2:-74052878 | None:intergenic |
CACTTTCTACTCATCCTTAT+GGG | 0.241504 | 1.2:+74049126 | MS.gene51128:CDS |
GTGTTCTCTGCTGAAAATAT+TGG | 0.241957 | 1.2:+74046923 | MS.gene51128:CDS |
ATATGGAAATTATGTTATTC+AGG | 0.250594 | 1.2:+74049356 | MS.gene51128:CDS |
TTGTCTGGGTTAAATTTATC+AGG | 0.258416 | 1.2:+74047007 | MS.gene51128:CDS |
CTCCCACTTCTTAGCAAATC+TGG | 0.263246 | 1.2:+74047744 | MS.gene51128:CDS |
CTTCCAATAACATGCGATTC+AGG | 0.263550 | 1.2:-74046863 | None:intergenic |
ACCCCTGAATCGCATGTTAT+TGG | 0.270879 | 1.2:+74046860 | MS.gene51128:CDS |
TGTTGCAAGCTCATTATGTT+TGG | 0.276631 | 1.2:-74047140 | None:intergenic |
TTATGGGTGCAGAGTTATTC+AGG | 0.280133 | 1.2:+74049142 | MS.gene51128:CDS |
TTCTATGATGAGAAGTTCTA+TGG | 0.282990 | 1.2:+74047908 | MS.gene51128:CDS |
CATCTTCGATCGAAAGATTT+GGG | 0.284253 | 1.2:+74046189 | MS.gene51128:CDS |
TTATTCAATGTTGTGTTTGC+AGG | 0.292684 | 1.2:-74047310 | None:intergenic |
ATCGAGAAGTGTTTGGCTTT+CGG | 0.295173 | 1.2:+74051631 | MS.gene51128:CDS |
TTCTTAATCAAGGGTTATTT+GGG | 0.298534 | 1.2:+74047769 | MS.gene51128:CDS |
GATATGGTGTCCTCTTTGTC+TGG | 0.299367 | 1.2:+74046992 | MS.gene51128:CDS |
ACAATGCATTTGGTGATATA+AGG | 0.323839 | 1.2:+74046693 | MS.gene51128:CDS |
TCACTTCCTTCTCTTGGATC+TGG | 0.324209 | 1.2:+74047846 | MS.gene51128:CDS |
TATGACCGATCTCGCCGATA+TGG | 0.325342 | 1.2:+74046976 | MS.gene51128:CDS |
CATGTTATTGGAAGACCTAT+TGG | 0.332634 | 1.2:+74046872 | MS.gene51128:CDS |
TCATCTTCGATCGAAAGATT+TGG | 0.338235 | 1.2:+74046188 | MS.gene51128:CDS |
AGCTCATGGCATGCTGATAT+TGG | 0.339561 | 1.2:+74047942 | MS.gene51128:CDS |
CATTCAAACTAAATGTGTTA+AGG | 0.351263 | 1.2:-74047165 | None:intergenic |
ATCGGCGAGATCGGTCATAT+TGG | 0.354680 | 1.2:-74046972 | None:intergenic |
AATTCCTCACTTCCTTCTCT+TGG | 0.354783 | 1.2:+74047840 | MS.gene51128:CDS |
ATCCGAAAGTTCAAAAGGTT+TGG | 0.355350 | 1.2:-74048024 | None:intergenic |
ACCAAAATTTGACGTTCTTC+AGG | 0.364816 | 1.2:-74051658 | None:intergenic |
GAATTGGCCAACCAACTTAC+AGG | 0.365800 | 1.2:+74048434 | MS.gene51128:CDS |
CGATCGAAAGATTTGGGGAT+TGG | 0.367206 | 1.2:+74046195 | MS.gene51128:CDS |
ATTGTTATCAGCAAGCTTGC+TGG | 0.372922 | 1.2:+74051565 | MS.gene51128:CDS |
GAGGGATCGTTAAGTGCTTT+TGG | 0.377684 | 1.2:+74045960 | MS.gene51128:CDS |
GGTCTTGGAATGCCACATTC+AGG | 0.378919 | 1.2:+74047804 | MS.gene51128:CDS |
CCTCTTAGTCTGCAAATGTA+TGG | 0.380351 | 1.2:+74048467 | MS.gene51128:CDS |
CTGATGAACGCAACCCCTCC+AGG | 0.385374 | 1.2:-74046745 | None:intergenic |
ATTATTCATTTCCAGCTTTG+AGG | 0.387105 | 1.2:+74047475 | MS.gene51128:intron |
TGGAAATTATGTTGTGCAAA+AGG | 0.389684 | 1.2:+74052788 | MS.gene51128:CDS |
TGAATTCAATTCTGCAACTC+TGG | 0.390262 | 1.2:+74047548 | MS.gene51128:CDS |
GTTGCAAGCTCATTATGTTT+GGG | 0.390790 | 1.2:-74047139 | None:intergenic |
TGTTCTCTGCTGAAAATATT+GGG | 0.390928 | 1.2:+74046924 | MS.gene51128:CDS |
ATAACAATAGTCCGTTCATT+TGG | 0.391381 | 1.2:-74051550 | None:intergenic |
CACTGAGCTCTGACACCATT+TGG | 0.394789 | 1.2:-74048983 | None:intergenic |
TTCTGAAGTCCGACCAAACC+TGG | 0.395317 | 1.2:-74046776 | None:intergenic |
TAATGTCATCGAGAAGTGTT+TGG | 0.395669 | 1.2:+74051624 | MS.gene51128:CDS |
GCGATGAACTATCACCGTTC+GGG | 0.398606 | 1.2:-74046232 | None:intergenic |
CCAAATGCATTGTGACTTGC+TGG | 0.403734 | 1.2:-74046683 | None:intergenic |
CTCGCACCAAGACCAGTTCC+TGG | 0.403737 | 1.2:-74046395 | None:intergenic |
ATCAGCCTCTACCCCAGGTT+TGG | 0.404746 | 1.2:+74046763 | MS.gene51128:CDS |
CTGATCATGTGGTACAGTTC+AGG | 0.408395 | 1.2:+74048051 | MS.gene51128:CDS |
AAATGTGTACGTGACCAAAA+TGG | 0.409587 | 1.2:+74049017 | MS.gene51128:CDS |
TGATAGTCAAAGAAAGGAAT+TGG | 0.410029 | 1.2:+74048418 | MS.gene51128:CDS |
CACTGTTGATCGTGAGCCCC+TGG | 0.410322 | 1.2:+74046727 | MS.gene51128:CDS |
TGCTGGACGTGACATATTGC+TGG | 0.414461 | 1.2:-74046666 | None:intergenic |
CAGGATATGCACCAGGAACT+TGG | 0.415432 | 1.2:-74047291 | None:intergenic |
TGCACAACATAATTTCCAAA+AGG | 0.421866 | 1.2:-74052783 | None:intergenic |
ACTTTAGCACAGGATCAATA+TGG | 0.426658 | 1.2:+74049339 | MS.gene51128:CDS |
GGCTTGATGACTGATGTCTT+TGG | 0.427749 | 1.2:+74048252 | MS.gene51128:CDS |
AAATCTGGGCTTCTTAATCA+AGG | 0.429011 | 1.2:+74047759 | MS.gene51128:CDS |
TTGGGCAAATTAACATTGTT+TGG | 0.429262 | 1.2:-74047121 | None:intergenic |
AACACTTTGCTACCCATTTG+AGG | 0.430251 | 1.2:-74046905 | None:intergenic |
AACGTGGTTACGATATTTAT+AGG | 0.433335 | 1.2:+74045913 | MS.gene51128:CDS |
TTCACAACATGGAGACTTAG+AGG | 0.433352 | 1.2:+74047665 | MS.gene51128:CDS |
ATTGGAAGACCTATTGGATC+TGG | 0.438501 | 1.2:+74046878 | MS.gene51128:CDS |
CCGAACTTTGCTGCAAGCAT+TGG | 0.441892 | 1.2:-74047584 | None:intergenic |
CCAGCAAGTCACAATGCATT+TGG | 0.442961 | 1.2:+74046683 | MS.gene51128:CDS |
CGTTATTGTCAAAAGAAGAT+TGG | 0.444080 | 1.2:+74046132 | MS.gene51128:CDS |
AAACATTGGATTTACCGAAT+AGG | 0.445176 | 1.2:+74045814 | MS.gene51128:CDS |
TCCGTAAGTGTATCGCTTCA+GGG | 0.450230 | 1.2:-74052877 | None:intergenic |
GGAGATGGCCGGTGGGAGTA+AGG | 0.453948 | 1.2:+74045782 | None:intergenic |
GTGTCTTCAAGTGTCCTATT+CGG | 0.458064 | 1.2:-74045828 | None:intergenic |
AGAAGTTCTATGGGAGGGTC+TGG | 0.458810 | 1.2:+74047918 | MS.gene51128:CDS |
ACAGGCAGAAGATGATTTGA+TGG | 0.460113 | 1.2:+74046286 | MS.gene51128:CDS |
AAGATGATTTGATGGAACTA+AGG | 0.465209 | 1.2:+74046294 | MS.gene51128:CDS |
AATAATCTCAGGAAATATCT+TGG | 0.467432 | 1.2:-74048217 | None:intergenic |
CCAATGCTTGCAGCAAAGTT+CGG | 0.468395 | 1.2:+74047584 | MS.gene51128:CDS |
TGGATCTGGAGTTCCTCAAA+TGG | 0.469562 | 1.2:+74046892 | MS.gene51128:CDS |
AGTGAACCTTGATGCGAGAA+AGG | 0.469606 | 1.2:-74052848 | None:intergenic |
GGGAGTCAGCCATATGGTCT+TGG | 0.470079 | 1.2:+74047789 | MS.gene51128:CDS |
AGCGATGAACTATCACCGTT+CGG | 0.470389 | 1.2:-74046233 | None:intergenic |
GCACAACATAATTTCCAAAA+GGG | 0.473352 | 1.2:-74052782 | None:intergenic |
GTGATATCCGAAAGTTCAAA+AGG | 0.473663 | 1.2:-74048029 | None:intergenic |
CAAAGGTTTCAAGCTGGTGG+TGG | 0.474224 | 1.2:+74046164 | MS.gene51128:CDS |
ATGACAAGAATGCCAGGAAC+TGG | 0.476029 | 1.2:+74046383 | MS.gene51128:CDS |
TACAATAATCATCTTGAGAC+AGG | 0.476478 | 1.2:+74047337 | MS.gene51128:CDS |
GCTATGATGAAAGACCCTTT+TGG | 0.477440 | 1.2:+74052768 | MS.gene51128:CDS |
AATTTATTGACAGGCCTTGG+AGG | 0.482143 | 1.2:+74048938 | MS.gene51128:intron |
AGAATGCCAGGAACTGGTCT+TGG | 0.482420 | 1.2:+74046389 | MS.gene51128:CDS |
CGTTCATCAGCCTCTACCCC+AGG | 0.483193 | 1.2:+74046758 | MS.gene51128:CDS |
TCAGTTACTTGAGAGACATA+TGG | 0.483266 | 1.2:+74046355 | MS.gene51128:CDS |
TGGGAGGGTCTGGCAGCTCA+TGG | 0.486111 | 1.2:+74047928 | MS.gene51128:CDS |
GGACACCATATCGGCGAGAT+CGG | 0.489451 | 1.2:-74046981 | None:intergenic |
ATATGGTGTCCTCTTTGTCT+GGG | 0.490484 | 1.2:+74046993 | MS.gene51128:CDS |
TCCGACCAAACCTGGGGTAG+AGG | 0.493025 | 1.2:-74046768 | None:intergenic |
CCTGGAGAGATTTCGTCCAC+TGG | 0.494310 | 1.2:-74046321 | None:intergenic |
TGAGGAACTCCAGATCCAAT+AGG | 0.495520 | 1.2:-74046887 | None:intergenic |
TGGACACAATATAGATGCAC+TGG | 0.495550 | 1.2:+74047509 | MS.gene51128:CDS |
TCCCACTTCTTAGCAAATCT+GGG | 0.496621 | 1.2:+74047745 | MS.gene51128:CDS |
GTGTATAGAGTGTGTCCCTC+AGG | 0.500926 | 1.2:+74049058 | MS.gene51128:CDS |
CTAATTTCTGCTGAATAAAG+CGG | 0.502351 | 1.2:-74048170 | None:intergenic |
TGAATAACTCTGCACCCATA+AGG | 0.502971 | 1.2:-74049140 | None:intergenic |
TCGAAAGATTTGGGGATTGG+AGG | 0.503141 | 1.2:+74046198 | MS.gene51128:CDS |
AACGATCCCTCGACTGTTGG+AGG | 0.503542 | 1.2:-74045948 | None:intergenic |
TAACTGAGTTGAACTCTGCC+TGG | 0.504989 | 1.2:-74046339 | None:intergenic |
TTCCAATAACATGCGATTCA+GGG | 0.506033 | 1.2:-74046862 | None:intergenic |
AGACAAAGAGGACACCATAT+CGG | 0.508011 | 1.2:-74046990 | None:intergenic |
TAATGCAGTACTGATCAGTA+TGG | 0.509190 | 1.2:+74048144 | MS.gene51128:intron |
CATTGCAGAGTGAGCTGGAA+AGG | 0.509406 | 1.2:+74045850 | MS.gene51128:CDS |
CATTTGGTTTACCATGTTCG+AGG | 0.511970 | 1.2:-74051534 | None:intergenic |
CCAGTGGACGAAATCTCTCC+AGG | 0.513577 | 1.2:+74046321 | MS.gene51128:CDS |
GCCCTGAAGCGATACACTTA+CGG | 0.513793 | 1.2:+74052876 | MS.gene51128:CDS |
GTTGATCCTTTCTCGCATCA+AGG | 0.518050 | 1.2:+74052842 | MS.gene51128:CDS |
TTATTTGGGAGTCAGCCATA+TGG | 0.518384 | 1.2:+74047783 | MS.gene51128:CDS |
CCATACATTTGCAGACTAAG+AGG | 0.518638 | 1.2:-74048467 | None:intergenic |
CTTAACGATCCCTCGACTGT+TGG | 0.519555 | 1.2:-74045951 | None:intergenic |
TGGCCAGCAAAATCTATACT+TGG | 0.521119 | 1.2:-74047271 | None:intergenic |
GCAGAAATTAGAAACAGCTT+CGG | 0.523204 | 1.2:+74048182 | MS.gene51128:CDS |
TGATGAACGCAACCCCTCCA+GGG | 0.523980 | 1.2:-74046744 | None:intergenic |
ATTCGTTCATTCTCAAACAG+TGG | 0.524020 | 1.2:-74047873 | None:intergenic |
CGGTACTGATAGTCAAAGAA+AGG | 0.525687 | 1.2:+74048412 | MS.gene51128:CDS |
ATCTCTACTCATCCCATGCA+TGG | 0.527654 | 1.2:-74047613 | None:intergenic |
ATCTGTCTGCACTTTAGCAC+AGG | 0.530038 | 1.2:+74049329 | MS.gene51128:CDS |
CGCATGAGAGCATTAATCCT+AGG | 0.533464 | 1.2:+74046099 | MS.gene51128:CDS |
GGATCTGGAGTTCCTCAAAT+GGG | 0.533967 | 1.2:+74046893 | MS.gene51128:CDS |
AGCCCAGATTTGCTAAGAAG+TGG | 0.534392 | 1.2:-74047747 | None:intergenic |
GTTGATCGTGAGCCCCTGGA+GGG | 0.534451 | 1.2:+74046731 | MS.gene51128:CDS |
GGGAAGAGTAATAATAATGA+TGG | 0.535853 | 1.2:+74046020 | MS.gene51128:CDS |
GGATGAGATTCGATCACATC+CGG | 0.536572 | 1.2:+74046055 | MS.gene51128:CDS |
GATATCTGCTTTCCTGAATG+TGG | 0.536838 | 1.2:-74047816 | None:intergenic |
TTATTGACAGGCCTTGGAGG+TGG | 0.537615 | 1.2:+74048941 | MS.gene51128:intron |
CACATCCACCTTACTCCCAC+CGG | 0.537841 | 1.2:-74045790 | None:intergenic |
GCCTCTACCCCAGGTTTGGT+CGG | 0.538314 | 1.2:+74046767 | MS.gene51128:CDS |
AGACACATTGCAGAGTGAGC+TGG | 0.539066 | 1.2:+74045845 | MS.gene51128:CDS |
CGTGCATGAGGAATAATCTC+AGG | 0.543458 | 1.2:-74048228 | None:intergenic |
ACTTTAGAGTTGGAGATGGC+CGG | 0.547353 | 1.2:+74045771 | None:intergenic |
GTAAAACATGACCTGTAAGT+TGG | 0.548500 | 1.2:-74048445 | None:intergenic |
TGTGGCATTCCAAGACCATA+TGG | 0.557757 | 1.2:-74047798 | None:intergenic |
GACATATTGCTGGACAAAGC+GGG | 0.558388 | 1.2:-74046656 | None:intergenic |
TAATAATACGAAAGATAAGC+CGG | 0.562624 | 1.2:-74046074 | None:intergenic |
TAAATTTAACCCAGACAAAG+AGG | 0.562958 | 1.2:-74047002 | None:intergenic |
CTATACACTTCTGAATAACA+TGG | 0.565005 | 1.2:-74049043 | None:intergenic |
AGTTCGGAGTACTCCATGCA+TGG | 0.566960 | 1.2:+74047600 | MS.gene51128:CDS |
GCCTGTTGTACAGAAAATCC+CGG | 0.567341 | 1.2:-74046269 | None:intergenic |
AATAACGGTGGTGGTAACCT+AGG | 0.569257 | 1.2:-74046116 | None:intergenic |
GTTCTTGAACTCATCGAGCA+AGG | 0.573052 | 1.2:-74047994 | None:intergenic |
ATTACAGAGCTAATAATAGC+GGG | 0.574583 | 1.2:+74046000 | MS.gene51128:CDS |
TCCAATAACATGCGATTCAG+GGG | 0.575152 | 1.2:-74046861 | None:intergenic |
TAAGGTGGATGTGCAAACAT+TGG | 0.575374 | 1.2:+74045800 | MS.gene51128:CDS |
TGCTGATATTGGCAATAACA+TGG | 0.579496 | 1.2:+74047953 | MS.gene51128:CDS |
GATGGTATGACAAGAATGCC+AGG | 0.579752 | 1.2:+74046377 | MS.gene51128:CDS |
TTGGCAATAACATGGAGAGT+AGG | 0.581874 | 1.2:+74047961 | MS.gene51128:CDS |
AATCTGGGCTTCTTAATCAA+GGG | 0.585043 | 1.2:+74047760 | MS.gene51128:CDS |
CAGTTTATTAATCGAGAACG+TGG | 0.585182 | 1.2:+74045897 | MS.gene51128:CDS |
GGTTACGATATTTATAGGAG+TGG | 0.585655 | 1.2:+74045918 | MS.gene51128:CDS |
TTGTAGCACATCCTCGAACA+TGG | 0.586429 | 1.2:+74051523 | MS.gene51128:intron |
AACATGACCTGTAAGTTGGT+TGG | 0.587110 | 1.2:-74048441 | None:intergenic |
ATGGAGACTTAGAGGGACTT+CGG | 0.587677 | 1.2:+74047673 | MS.gene51128:CDS |
GATGGCCGGTGGGAGTAAGG+TGG | 0.591616 | 1.2:+74045785 | None:intergenic |
GCCCAGATTTGCTAAGAAGT+GGG | 0.592221 | 1.2:-74047746 | None:intergenic |
AGGAAGAATGCAACCCCGAA+CGG | 0.593437 | 1.2:+74046218 | MS.gene51128:CDS |
TCTGAAGTCCGACCAAACCT+GGG | 0.595260 | 1.2:-74046775 | None:intergenic |
GTGGAGAAGCTGATAACCAC+CGG | 0.600377 | 1.2:+74052918 | MS.gene51128:CDS |
GCTTTGAGGAGTCGTAGAGA+TGG | 0.600609 | 1.2:+74047489 | MS.gene51128:intron |
TCTATGATGAGAAGTTCTAT+GGG | 0.602254 | 1.2:+74047909 | MS.gene51128:CDS |
GTTGCACAAAGGTTTCAAGC+TGG | 0.604886 | 1.2:+74046158 | MS.gene51128:CDS |
TGTTGATCGTGAGCCCCTGG+AGG | 0.605487 | 1.2:+74046730 | MS.gene51128:CDS |
TCACAACATGGAGACTTAGA+GGG | 0.605858 | 1.2:+74047666 | MS.gene51128:CDS |
GATGCACTGGGAAATCAAGT+AGG | 0.606300 | 1.2:+74047522 | MS.gene51128:CDS |
GATGAACGCAACCCCTCCAG+GGG | 0.606359 | 1.2:-74046743 | None:intergenic |
TTAGAGTTGGAGATGGCCGG+TGG | 0.606382 | 1.2:+74045774 | None:intergenic |
GAGATTATTCCTCATGCACG+TGG | 0.606869 | 1.2:+74048231 | MS.gene51128:CDS |
AGATCCAAGAGAAGGAAGTG+AGG | 0.607314 | 1.2:-74047844 | None:intergenic |
GTTCGGAGTACTCCATGCAT+GGG | 0.608483 | 1.2:+74047601 | MS.gene51128:CDS |
ATCAACATCAACCACCTCCA+AGG | 0.609497 | 1.2:-74048952 | None:intergenic |
AAAGGTTTCAAGCTGGTGGT+GGG | 0.609555 | 1.2:+74046165 | MS.gene51128:CDS |
GGATTTCCAGATCCAAGAGA+AGG | 0.610022 | 1.2:-74047852 | None:intergenic |
GTCATCAAGCCACGTGCATG+AGG | 0.612201 | 1.2:-74048240 | None:intergenic |
TTCGGATATCACTGATCATG+TGG | 0.612905 | 1.2:+74048040 | MS.gene51128:CDS |
TGATGAGAAGTTCTATGGGA+GGG | 0.616636 | 1.2:+74047913 | MS.gene51128:CDS |
TAAACTGAATTCTATCCTGA+GGG | 0.618197 | 1.2:-74049073 | None:intergenic |
ATCTTCGATCGAAAGATTTG+GGG | 0.618852 | 1.2:+74046190 | MS.gene51128:CDS |
CAAGGGCTCATTCTCATCAG+AGG | 0.619272 | 1.2:-74051698 | None:intergenic |
AACATGGTAAACCAAATGAA+CGG | 0.622560 | 1.2:+74051539 | MS.gene51128:CDS |
ATAAACTGAATTCTATCCTG+AGG | 0.624797 | 1.2:-74049074 | None:intergenic |
TTTGCATTCATTACCTCCGG+TGG | 0.625939 | 1.2:-74052934 | None:intergenic |
TGTTGATCAGCAGAGCCAAA+TGG | 0.628440 | 1.2:+74048968 | MS.gene51128:CDS |
GCACAAAGGTTTCAAGCTGG+TGG | 0.629515 | 1.2:+74046161 | MS.gene51128:CDS |
AGTGCGCCTCCAACAGTCGA+GGG | 0.634593 | 1.2:+74045942 | MS.gene51128:CDS |
AAGATTGGCGTGTTGCACAA+AGG | 0.636137 | 1.2:+74046147 | MS.gene51128:CDS |
GTGTTTGCAGGATATGCACC+AGG | 0.641149 | 1.2:-74047298 | None:intergenic |
AAGTGCGCCTCCAACAGTCG+AGG | 0.647392 | 1.2:+74045941 | MS.gene51128:CDS |
GGTGATATAAGGAACTCGAC+TGG | 0.648016 | 1.2:+74046704 | MS.gene51128:CDS |
GATTACAGAGCTAATAATAG+CGG | 0.650364 | 1.2:+74045999 | MS.gene51128:CDS |
ATGATGAGAAGTTCTATGGG+AGG | 0.656883 | 1.2:+74047912 | MS.gene51128:CDS |
CGATGAACTATCACCGTTCG+GGG | 0.666661 | 1.2:-74046231 | None:intergenic |
GGACACAATATAGATGCACT+GGG | 0.670012 | 1.2:+74047510 | MS.gene51128:CDS |
TAGAGTTGGAGATGGCCGGT+GGG | 0.671149 | 1.2:+74045775 | None:intergenic |
AAAACACATAGTTTCTCGTG+TGG | 0.671184 | 1.2:+74052899 | MS.gene51128:CDS |
TGCAAGCATTGGATGATACG+TGG | 0.671611 | 1.2:-74047573 | None:intergenic |
TGACATATTGCTGGACAAAG+CGG | 0.677207 | 1.2:-74046657 | None:intergenic |
GCAAGCATTGGATGATACGT+GGG | 0.687503 | 1.2:-74047572 | None:intergenic |
CTGAAGTCCGACCAAACCTG+GGG | 0.688804 | 1.2:-74046774 | None:intergenic |
TTACTTGAGAGACATATGGA+TGG | 0.692158 | 1.2:+74046359 | MS.gene51128:CDS |
TTGATCGTGAGCCCCTGGAG+GGG | 0.698290 | 1.2:+74046732 | MS.gene51128:CDS |
TATTGGAAGAGTGACCATTG+TGG | 0.700355 | 1.2:-74046955 | None:intergenic |
TTGGTCGGACTTCAGAACCA+CGG | 0.706544 | 1.2:+74046782 | MS.gene51128:CDS |
ATGGAACTAAGGAAAGCCAG+TGG | 0.715879 | 1.2:+74046305 | MS.gene51128:CDS |
ATTGGGTTGAGTAACCACAA+TGG | 0.735692 | 1.2:+74046941 | MS.gene51128:CDS |
GAGAAGCTGATAACCACCGG+AGG | 0.736931 | 1.2:+74052921 | MS.gene51128:CDS |
AACTGTGAGAATTTACACCG+TGG | 0.749393 | 1.2:-74046799 | None:intergenic |
CAAATGGTGTCAGAGCTCAG+TGG | 0.772687 | 1.2:+74048984 | MS.gene51128:CDS |
TGGTTGCAGAGTGATTCAGA+AGG | 0.784194 | 1.2:+74048487 | MS.gene51128:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 74045786 | 74052942 | 74045786 | ID=MS.gene51128 |
chr1.2 | mRNA | 74045786 | 74052942 | 74045786 | ID=MS.gene51128.t1;Parent=MS.gene51128 |
chr1.2 | exon | 74045786 | 74046445 | 74045786 | ID=MS.gene51128.t1.exon1;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74045786 | 74046445 | 74045786 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74046641 | 74047358 | 74046641 | ID=MS.gene51128.t1.exon2;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74046641 | 74047358 | 74046641 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74047490 | 74048072 | 74047490 | ID=MS.gene51128.t1.exon3;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74047490 | 74048072 | 74047490 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74048152 | 74048293 | 74048152 | ID=MS.gene51128.t1.exon4;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74048152 | 74048293 | 74048152 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74048401 | 74048508 | 74048401 | ID=MS.gene51128.t1.exon5;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74048401 | 74048508 | 74048401 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74048951 | 74049163 | 74048951 | ID=MS.gene51128.t1.exon6;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74048951 | 74049163 | 74048951 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74049267 | 74049377 | 74049267 | ID=MS.gene51128.t1.exon7;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74049267 | 74049377 | 74049267 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74051529 | 74051723 | 74051529 | ID=MS.gene51128.t1.exon8;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74051529 | 74051723 | 74051529 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
chr1.2 | exon | 74052768 | 74052942 | 74052768 | ID=MS.gene51128.t1.exon9;Parent=MS.gene51128.t1 |
chr1.2 | CDS | 74052768 | 74052942 | 74052768 | ID=cds.MS.gene51128.t1;Parent=MS.gene51128.t1 |
Gene Sequence |
Protein sequence |