AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51634


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51634.t1 MTR_3g009510 83.125 480 78 1 1 480 1 477 0.0 842
MS.gene51634.t1 MTR_3g009500 94.636 261 14 0 1 261 1 261 0.0 518
MS.gene51634.t1 MTR_3g009520 78.824 255 52 2 4 257 5 258 1.18e-142 410
MS.gene51634.t1 MTR_3g009490 94.764 191 10 0 292 482 1 191 3.24e-129 373
MS.gene51634.t1 MTR_6g033675 41.598 488 257 8 2 482 1 467 2.87e-118 355
MS.gene51634.t1 MTR_6g033725 40.862 487 259 9 2 482 1 464 5.51e-118 355
MS.gene51634.t1 MTR_6g033625 40.447 492 257 10 2 482 1 467 2.36e-113 342
MS.gene51634.t1 MTR_6g033660 40.779 488 254 10 5 482 4 466 5.19e-113 342
MS.gene51634.t1 MTR_6g033615 39.836 487 247 11 2 479 1 450 4.08e-110 334
MS.gene51634.t1 MTR_6g488280 36.401 489 271 11 3 479 4 464 1.47e-95 296
MS.gene51634.t1 MTR_0428s0010 36.401 489 271 11 3 479 4 464 1.47e-95 296
MS.gene51634.t1 MTR_6g023665 36.250 480 284 8 3 479 11 471 7.03e-95 295
MS.gene51634.t1 MTR_8g027885 37.422 481 267 11 6 479 19 472 8.95e-94 293
MS.gene51634.t1 MTR_8g465670 34.908 487 290 10 3 481 5 472 9.75e-92 287
MS.gene51634.t1 MTR_8g027870 36.175 481 273 11 6 479 19 472 9.23e-91 285
MS.gene51634.t1 MTR_7g117170 34.656 479 293 8 6 481 16 477 2.05e-90 284
MS.gene51634.t1 MTR_8g006710 36.743 479 276 10 3 475 4 461 1.88e-88 278
MS.gene51634.t1 MTR_8g006220 34.747 495 289 11 3 481 4 480 3.02e-87 276
MS.gene51634.t1 MTR_8g006730 36.268 477 282 8 3 475 4 462 5.39e-87 275
MS.gene51634.t1 MTR_0184s0040 34.560 489 290 13 1 481 16 482 3.69e-86 273
MS.gene51634.t1 MTR_0078s0190 34.560 489 290 13 1 481 16 482 3.69e-86 273
MS.gene51634.t1 MTR_8g009055 33.333 492 293 11 1 481 1 468 1.13e-85 271
MS.gene51634.t1 MTR_2g040530 35.787 489 275 15 1 477 1 462 1.29e-85 271
MS.gene51634.t1 MTR_8g009050 33.129 489 287 10 6 481 7 468 1.41e-84 268
MS.gene51634.t1 MTR_0184s0030 35.464 485 277 15 1 473 1 461 1.54e-84 268
MS.gene51634.t1 MTR_5g090660 35.378 489 285 14 1 477 1 470 2.00e-84 271
MS.gene51634.t1 MTR_2g046750 35.438 491 275 16 1 477 1 463 4.87e-82 262
MS.gene51634.t1 MTR_8g008990 32.998 497 290 12 1 481 1 470 1.13e-81 261
MS.gene51634.t1 MTR_2g046820 34.639 485 284 13 1 477 1 460 2.16e-81 260
MS.gene51634.t1 MTR_7g046490 35.876 485 280 10 3 480 4 464 4.05e-81 259
MS.gene51634.t1 MTR_8g012635 36.788 386 232 6 93 473 87 465 5.25e-81 259
MS.gene51634.t1 MTR_8g012650 36.585 369 225 5 107 473 104 465 1.54e-80 258
MS.gene51634.t1 MTR_8g009063 33.891 478 298 9 6 481 14 475 1.08e-79 256
MS.gene51634.t1 MTR_8g006260 33.884 484 295 10 3 479 4 469 3.42e-79 254
MS.gene51634.t1 MTR_5g098930 34.990 503 263 20 1 477 1 465 1.12e-78 253
MS.gene51634.t1 MTR_8g009073 31.967 488 303 10 1 481 1 466 3.30e-78 252
MS.gene51634.t1 MTR_6g005600 34.511 481 286 13 3 475 4 463 3.71e-78 252
MS.gene51634.t1 MTR_8g006270 33.194 479 299 9 3 479 4 463 3.91e-78 252
MS.gene51634.t1 MTR_8g074550 33.333 495 300 12 4 480 7 489 1.43e-77 251
MS.gene51634.t1 MTR_5g090610 32.857 490 284 17 1 477 1 458 1.51e-76 248
MS.gene51634.t1 MTR_5g090700 32.530 498 291 16 1 477 1 474 2.13e-76 248
MS.gene51634.t1 MTR_5g090580 33.468 496 287 19 1 477 1 472 2.87e-76 247
MS.gene51634.t1 MTR_8g012745 36.154 390 226 9 93 473 87 462 3.18e-76 247
MS.gene51634.t1 MTR_8g009067 34.204 383 241 4 99 481 95 466 4.15e-76 246
MS.gene51634.t1 MTR_1g019510 31.148 488 306 10 1 481 1 465 6.26e-76 246
MS.gene51634.t1 MTR_5g090670 33.333 498 287 20 1 477 1 474 2.78e-75 244
MS.gene51634.t1 MTR_5g090630 31.687 486 300 13 1 477 1 463 3.00e-75 244
MS.gene51634.t1 MTR_0078s0060 33.612 479 296 12 1 475 1 461 5.98e-75 243
MS.gene51634.t1 MTR_5g070090 31.612 484 289 14 3 477 9 459 7.99e-75 243
MS.gene51634.t1 MTR_5g070040 33.673 490 276 16 3 477 9 464 1.44e-74 242
MS.gene51634.t1 MTR_8g009073 36.705 346 206 5 137 481 4 337 4.71e-74 237
MS.gene51634.t1 MTR_7g047030 33.542 480 296 14 1 475 1 462 5.13e-74 241
MS.gene51634.t1 MTR_7g047270 33.542 480 296 14 1 475 1 462 5.13e-74 241
MS.gene51634.t1 MTR_8g009067 35.854 357 218 4 125 481 3 348 6.36e-74 237
MS.gene51634.t1 MTR_5g090620 32.186 494 295 18 1 476 1 472 4.75e-73 239
MS.gene51634.t1 MTR_0078s0010 33.673 490 282 16 1 475 1 462 7.91e-73 238
MS.gene51634.t1 MTR_8g008970 35.325 385 234 6 99 481 95 466 5.17e-72 243
MS.gene51634.t1 MTR_8g008970 38.462 286 149 4 197 481 531 790 1.57e-53 192
MS.gene51634.t1 MTR_8g077590 35.770 383 218 8 108 482 107 469 5.45e-71 233
MS.gene51634.t1 MTR_5g019580 31.753 485 300 12 7 477 9 476 1.41e-69 230
MS.gene51634.t1 MTR_5g090600 32.106 489 280 17 1 476 1 450 3.99e-67 223
MS.gene51634.t1 MTR_8g012730 37.152 323 172 5 152 472 8 301 1.11e-63 209
MS.gene51634.t1 MTR_5g019580 31.315 479 282 13 7 477 61 500 2.41e-63 214
MS.gene51634.t1 MTR_8g066610 31.187 497 286 16 6 477 10 475 2.94e-60 205
MS.gene51634.t1 MTR_1g019520 46.296 216 113 2 266 481 2 214 5.56e-59 194
MS.gene51634.t1 MTR_4g082820 30.595 487 300 14 6 482 8 466 1.72e-58 200
MS.gene51634.t1 MTR_4g485630 30.769 494 288 11 6 477 10 471 6.61e-58 199
MS.gene51634.t1 MTR_8g012630 46.377 207 109 2 267 472 203 408 6.35e-56 192
MS.gene51634.t1 MTR_0009s0240 31.417 487 289 18 3 478 5 457 1.03e-53 187
MS.gene51634.t1 MTR_5g464760 30.350 514 273 16 3 477 10 477 1.88e-53 187
MS.gene51634.t1 MTR_2g098430 27.699 491 284 17 3 461 4 455 4.37e-52 184
MS.gene51634.t1 MTR_5g087620 31.068 515 286 21 3 478 8 492 4.72e-52 184
MS.gene51634.t1 MTR_0536s0020 30.200 500 280 19 5 476 18 476 9.39e-52 182
MS.gene51634.t1 MTR_4g082810 29.655 435 260 13 6 425 8 411 1.07e-51 181
MS.gene51634.t1 MTR_7g102550 30.178 507 284 18 7 477 11 483 1.76e-51 182
MS.gene51634.t1 MTR_3g069710 32.158 482 270 17 6 476 13 448 1.05e-50 179
MS.gene51634.t1 MTR_4g485620 32.134 389 199 12 117 477 101 452 2.03e-50 178
MS.gene51634.t1 MTR_5g035560 31.458 480 277 16 6 476 12 448 3.74e-50 179
MS.gene51634.t1 MTR_4g117980 29.921 508 284 19 2 476 10 478 1.02e-49 177
MS.gene51634.t1 MTR_6g038300 29.461 482 290 12 6 477 12 453 1.54e-49 176
MS.gene51634.t1 MTR_5g045960 31.693 508 275 21 7 477 11 483 2.10e-49 176
MS.gene51634.t1 MTR_5g035580 30.081 492 268 17 6 476 14 450 2.87e-49 175
MS.gene51634.t1 MTR_4g117960 30.799 513 272 22 2 476 10 477 4.90e-49 175
MS.gene51634.t1 MTR_5g464810 30.495 505 276 16 6 477 13 475 6.31e-49 175
MS.gene51634.t1 MTR_5g064240 30.495 505 276 16 6 477 13 475 6.31e-49 175
MS.gene51634.t1 MTR_0036s0220 29.259 499 290 15 6 477 13 475 2.47e-48 173
MS.gene51634.t1 MTR_6g038240 28.947 494 274 16 7 477 13 452 7.41e-48 171
MS.gene51634.t1 MTR_5g045970 28.709 519 278 18 6 477 17 490 8.77e-48 172
MS.gene51634.t1 MTR_1g062380 28.684 509 292 18 6 477 17 491 6.74e-47 170
MS.gene51634.t1 MTR_4g095008 27.801 482 307 11 5 476 11 461 1.79e-46 169
MS.gene51634.t1 MTR_7g070740 28.942 501 300 17 3 476 9 480 2.80e-46 168
MS.gene51634.t1 MTR_7g102450 30.120 498 280 20 7 477 13 469 4.89e-46 167
MS.gene51634.t1 MTR_4g117890 29.622 503 294 18 5 482 13 480 7.17e-46 167
MS.gene51634.t1 MTR_6g038200 28.000 475 301 13 7 476 13 451 1.17e-45 166
MS.gene51634.t1 MTR_3g069690 28.992 476 295 14 6 476 9 446 1.23e-45 166
MS.gene51634.t1 MTR_7g102560 27.593 511 290 16 7 477 11 481 2.26e-45 165
MS.gene51634.t1 MTR_4g118000 28.743 501 283 18 2 476 11 463 4.08e-45 164
MS.gene51634.t1 MTR_6g035265 28.770 504 289 19 2 477 10 471 4.21e-45 164
MS.gene51634.t1 MTR_2g008210 29.191 507 276 16 7 476 13 473 4.33e-45 164
MS.gene51634.t1 MTR_8g071070 28.221 489 310 16 3 477 5 466 7.28e-45 164
MS.gene51634.t1 MTR_7g070940 27.146 501 300 18 3 476 7 469 7.84e-45 164
MS.gene51634.t1 MTR_6g078320 30.159 378 234 12 115 482 125 482 9.07e-45 164
MS.gene51634.t1 MTR_1g029540 30.110 362 222 9 110 468 115 448 1.11e-44 163
MS.gene51634.t1 MTR_6g035185 28.024 496 309 14 10 481 16 487 1.23e-44 163
MS.gene51634.t1 MTR_7g070660 26.877 506 294 17 6 476 12 476 1.44e-44 163
MS.gene51634.t1 MTR_8g059425 28.235 510 281 20 7 477 12 475 3.48e-44 162
MS.gene51634.t1 MTR_2g059240 31.048 496 273 16 7 477 15 466 4.05e-44 161
MS.gene51634.t1 MTR_5g016480 30.175 401 210 16 107 477 108 468 4.65e-44 161
MS.gene51634.t1 MTR_7g071040 28.094 509 295 19 3 476 15 487 7.21e-44 161
MS.gene51634.t1 MTR_7g055710 27.000 500 305 15 6 476 12 480 7.49e-44 161
MS.gene51634.t1 MTR_5g072830 27.479 484 289 15 6 476 11 445 8.35e-44 160
MS.gene51634.t1 MTR_7g013200 27.593 482 287 17 7 477 7 437 8.39e-44 160
MS.gene51634.t1 MTR_4g031800 28.974 497 290 18 6 476 10 469 1.26e-43 160
MS.gene51634.t1 MTR_4g094920 29.056 413 257 10 74 476 90 476 1.57e-43 160
MS.gene51634.t1 MTR_4g485590 29.535 430 227 13 6 417 10 381 1.58e-43 159
MS.gene51634.t1 MTR_5g072810 28.630 489 280 16 6 476 13 450 1.67e-43 159
MS.gene51634.t1 MTR_8g466240 28.487 509 275 21 3 481 6 455 3.07e-43 159
MS.gene51634.t1 MTR_7g102460 28.378 518 286 21 3 477 7 482 4.36e-43 159
MS.gene51634.t1 MTR_5g090690 32.215 298 155 10 94 385 49 305 1.06e-42 155
MS.gene51634.t1 MTR_4g094220 29.354 511 278 17 6 476 8 475 2.15e-42 157
MS.gene51634.t1 MTR_7g070930 27.626 514 285 18 6 476 15 484 2.27e-42 157
MS.gene51634.t1 MTR_5g040030 27.219 507 295 20 6 477 15 482 2.36e-42 157
MS.gene51634.t1 MTR_7g070800 26.587 504 299 16 6 476 7 472 2.39e-42 157
MS.gene51634.t1 MTR_7g070610 26.602 515 281 19 9 476 19 483 2.74e-42 157
MS.gene51634.t1 MTR_7g070810 26.367 512 293 17 3 476 7 472 4.24e-42 156
MS.gene51634.t1 MTR_7g070780 25.911 494 318 12 6 476 12 480 7.43e-42 156
MS.gene51634.t1 MTR_6g038230 27.500 480 297 15 7 476 13 451 1.09e-41 154
MS.gene51634.t1 MTR_7g117405 28.402 507 285 18 7 477 14 478 1.58e-41 155
MS.gene51634.t1 MTR_4g024020 26.769 523 291 16 3 477 7 485 1.74e-41 155
MS.gene51634.t1 MTR_4g485640 30.591 389 210 12 116 477 309 664 1.86e-41 157
MS.gene51634.t1 MTR_7g102520 28.876 516 279 17 7 477 14 486 1.95e-41 155
MS.gene51634.t1 MTR_8g088560 27.879 495 284 16 6 477 11 455 2.56e-41 154
MS.gene51634.t1 MTR_6g038220 27.083 480 298 15 7 476 13 450 2.64e-41 154
MS.gene51634.t1 MTR_4g008630 32.971 276 165 6 205 476 200 459 2.69e-41 154
MS.gene51634.t1 MTR_4g108250 27.327 505 301 14 6 476 12 484 2.86e-41 154
MS.gene51634.t1 MTR_5g072840 27.743 483 289 15 6 476 11 445 3.03e-41 153
MS.gene51634.t1 MTR_7g102490 27.432 514 298 17 3 477 7 484 5.48e-41 154
MS.gene51634.t1 MTR_6g014187 28.690 481 274 18 7 455 12 455 5.59e-41 153
MS.gene51634.t1 MTR_8g009840 44.670 197 103 4 285 479 333 525 8.42e-41 154
MS.gene51634.t1 MTR_7g013220 26.477 491 292 17 7 477 7 448 1.49e-40 151
MS.gene51634.t1 MTR_7g070860 25.845 503 292 15 5 476 7 459 1.50e-40 152
MS.gene51634.t1 MTR_7g011470 27.435 503 290 15 3 477 8 463 1.53e-40 152
MS.gene51634.t1 MTR_3g008010 27.823 496 275 14 3 460 8 458 1.86e-40 152
MS.gene51634.t1 MTR_6g013960 26.441 503 301 16 7 477 12 477 2.14e-40 152
MS.gene51634.t1 MTR_6g014250 27.022 507 299 16 3 477 8 475 2.54e-40 151
MS.gene51634.t1 MTR_6g013990 35.273 275 139 8 213 477 230 475 2.69e-40 151
MS.gene51634.t1 MTR_7g070910 25.969 516 297 18 3 476 9 481 3.02e-40 151
MS.gene51634.t1 MTR_8g032950 34.812 293 155 7 205 477 202 478 3.54e-40 151
MS.gene51634.t1 MTR_2g035040 34.247 292 155 9 205 476 109 383 4.09e-40 149
MS.gene51634.t1 MTR_3g079480 27.505 509 294 16 3 477 19 486 9.25e-40 150
MS.gene51634.t1 MTR_2g034990 35.417 288 149 9 210 477 209 479 9.49e-40 150
MS.gene51634.t1 MTR_6g052375 31.214 346 161 9 143 480 2 278 9.72e-40 146
MS.gene51634.t1 MTR_4g064987 29.243 489 287 17 2 477 5 447 1.00e-39 149
MS.gene51634.t1 MTR_1g107380 30.284 317 187 10 166 476 181 469 1.07e-39 149
MS.gene51634.t1 MTR_8g090095 32.155 283 161 7 205 476 214 476 1.32e-39 149
MS.gene51634.t1 MTR_7g080900 28.690 481 294 19 7 478 14 454 1.65e-39 149
MS.gene51634.t1 MTR_4g064987 28.834 489 283 16 2 477 5 441 1.93e-39 148
MS.gene51634.t1 MTR_3g479610 33.929 280 145 7 210 477 59 310 2.02e-39 145
MS.gene51634.t1 MTR_4g128690 29.973 367 221 8 113 477 118 450 3.09e-39 148
MS.gene51634.t1 MTR_6g014050 35.484 279 139 7 210 477 230 478 4.04e-39 148
MS.gene51634.t1 MTR_2g035020 35.690 297 154 9 200 476 199 478 5.65e-39 148
MS.gene51634.t1 MTR_7g080950 28.367 490 272 19 12 478 13 446 7.87e-39 147
MS.gene51634.t1 MTR_6g014220 27.579 504 300 16 3 477 8 475 8.25e-39 147
MS.gene51634.t1 MTR_5g031840 26.326 509 283 18 6 477 6 459 1.06e-38 147
MS.gene51634.t1 MTR_5g072820 26.708 483 294 14 6 476 11 445 1.11e-38 146
MS.gene51634.t1 MTR_8g083290 27.811 507 281 17 6 477 5 461 1.55e-38 146
MS.gene51634.t1 MTR_7g011470 27.381 504 285 14 3 477 8 459 2.30e-38 145
MS.gene51634.t1 MTR_3g479520 26.733 505 303 14 3 477 13 480 2.57e-38 146
MS.gene51634.t1 MTR_5g016660 26.953 512 299 17 3 477 8 481 2.76e-38 146
MS.gene51634.t1 MTR_5g067170 35.540 287 150 9 210 477 207 477 3.80e-38 145
MS.gene51634.t1 MTR_6g011340 29.793 386 220 11 113 477 122 477 4.35e-38 145
MS.gene51634.t1 MTR_7g012120 39.301 229 121 5 258 476 260 480 4.67e-38 145
MS.gene51634.t1 MTR_3g031450 25.403 496 295 15 2 478 15 454 6.28e-38 144
MS.gene51634.t1 MTR_6g014290 25.247 507 308 14 3 477 8 475 9.10e-38 144
MS.gene51634.t1 MTR_6g014040 28.016 514 280 20 7 477 12 478 9.22e-38 144
MS.gene51634.t1 MTR_6g014200 28.389 391 219 12 113 477 119 474 1.06e-37 144
MS.gene51634.t1 MTR_3g031400 26.132 486 270 18 6 468 19 438 1.97e-37 143
MS.gene51634.t1 MTR_6g013920 29.231 390 217 12 113 477 121 476 2.12e-37 143
MS.gene51634.t1 MTR_8g083280 35.055 271 138 8 213 477 221 459 5.41e-37 142
MS.gene51634.t1 MTR_5g058320 34.767 279 141 8 210 477 214 462 6.97e-37 142
MS.gene51634.t1 MTR_5g072860 26.141 482 299 14 6 472 19 458 9.21e-37 141
MS.gene51634.t1 MTR_6g014190 32.847 274 145 6 214 477 40 284 1.16e-36 137
MS.gene51634.t1 MTR_5g029800 38.696 230 121 6 258 476 254 474 1.35e-36 141
MS.gene51634.t1 MTR_7g080940 32.867 286 147 8 206 478 198 451 1.37e-36 140
MS.gene51634.t1 MTR_3g479490 26.761 497 296 15 3 469 4 462 1.69e-36 140
MS.gene51634.t1 MTR_5g039900 27.148 512 289 19 6 477 14 481 1.89e-36 141
MS.gene51634.t1 MTR_3g084520 29.708 377 225 12 116 472 109 465 1.96e-36 140
MS.gene51634.t1 MTR_5g090650 30.894 369 198 12 1 362 1 319 1.98e-36 137
MS.gene51634.t1 MTR_3g084530 30.541 370 217 12 127 476 120 469 2.37e-36 140
MS.gene51634.t1 MTR_0536s0010 29.032 372 209 14 127 476 135 473 2.51e-36 140
MS.gene51634.t1 MTR_3g084540 26.892 502 298 15 6 477 9 471 2.57e-36 140
MS.gene51634.t1 MTR_6g014170 25.553 497 303 15 3 477 8 459 3.80e-36 139
MS.gene51634.t1 MTR_0891s0010 31.769 277 149 7 213 477 39 287 4.06e-36 135
MS.gene51634.t1 MTR_3g049970 34.397 282 154 9 205 477 208 467 4.53e-36 139
MS.gene51634.t1 MTR_1g107365 25.506 494 296 13 6 477 46 489 6.81e-36 139
MS.gene51634.t1 MTR_6g013900 27.446 419 240 11 90 477 91 476 9.42e-36 139
MS.gene51634.t1 MTR_1g107360 25.451 499 296 15 6 477 10 459 9.87e-36 138
MS.gene51634.t1 MTR_7g470610 29.524 315 159 10 120 417 1 269 1.35e-35 134
MS.gene51634.t1 MTR_7g070583 29.524 315 159 10 120 417 1 269 1.35e-35 134
MS.gene51634.t1 MTR_6g013440 26.070 514 297 19 3 477 9 478 1.55e-35 138
MS.gene51634.t1 MTR_5g075440 28.342 374 206 11 117 468 111 444 1.82e-35 137
MS.gene51634.t1 MTR_6g014240 28.219 365 213 9 125 477 117 444 1.88e-35 137
MS.gene51634.t1 MTR_7g080935 27.833 503 276 19 3 478 9 451 2.03e-35 137
MS.gene51634.t1 MTR_0288s0020 25.352 497 303 14 3 477 8 458 2.11e-35 137
MS.gene51634.t1 MTR_6g014270 32.857 280 145 8 210 477 228 476 2.72e-35 137
MS.gene51634.t1 MTR_4g117950 28.460 383 219 14 117 477 111 460 3.73e-35 137
MS.gene51634.t1 MTR_6g013450 28.535 389 222 11 113 477 122 478 9.96e-35 136
MS.gene51634.t1 MTR_8g044140 29.620 395 208 13 117 477 88 446 1.58e-34 135
MS.gene51634.t1 MTR_4g128720 29.442 394 236 13 90 477 96 453 2.23e-34 134
MS.gene51634.t1 MTR_7g013180 29.006 362 208 12 125 477 124 445 2.51e-34 134
MS.gene51634.t1 MTR_6g014310 32.734 278 148 8 210 477 230 478 2.85e-34 134
MS.gene51634.t1 MTR_1g040310 26.471 510 291 18 7 477 17 481 4.93e-34 134
MS.gene51634.t1 MTR_6g014020 33.451 284 148 9 205 477 224 477 6.09e-34 134
MS.gene51634.t1 MTR_8g068330 26.452 465 298 9 6 457 9 442 6.74e-34 133
MS.gene51634.t1 MTR_5g031830 25.440 511 287 18 6 477 13 468 7.66e-34 133
MS.gene51634.t1 MTR_8g068340 26.722 479 279 13 6 457 13 446 9.76e-34 133
MS.gene51634.t1 MTR_5g031860 26.210 496 301 16 6 477 13 467 1.07e-33 133
MS.gene51634.t1 MTR_0078s0200 29.167 312 197 11 12 316 13 307 1.19e-33 129
MS.gene51634.t1 MTR_1g107285 26.234 385 227 11 110 477 117 461 1.26e-33 132
MS.gene51634.t1 MTR_1g107350 29.333 375 231 10 113 477 116 466 1.63e-33 132
MS.gene51634.t1 MTR_7g013240 27.089 395 218 13 96 476 98 436 2.30e-33 131
MS.gene51634.t1 MTR_7g071050 34.177 237 123 6 239 458 195 415 3.22e-33 130
MS.gene51634.t1 MTR_6g035295 26.044 503 305 20 6 477 13 479 7.57e-33 130
MS.gene51634.t1 MTR_6g014150 31.786 280 148 7 210 477 226 474 9.45e-33 130
MS.gene51634.t1 MTR_2g008220 27.214 463 286 13 6 454 15 440 2.26e-32 129
MS.gene51634.t1 MTR_4g123553 26.305 479 272 14 6 459 16 438 3.95e-32 128
MS.gene51634.t1 MTR_8g007585 34.685 222 121 5 258 477 190 389 4.16e-32 127
MS.gene51634.t1 MTR_7g013260 32.353 238 137 8 243 479 225 439 6.26e-32 127
MS.gene51634.t1 MTR_5g027210 23.985 517 295 17 6 465 5 480 7.31e-32 127
MS.gene51634.t1 MTR_7g070870 33.040 227 120 7 197 417 209 409 8.28e-32 127
MS.gene51634.t1 MTR_1g107315 34.615 286 148 9 205 477 207 466 1.13e-31 127
MS.gene51634.t1 MTR_2g008225 26.623 462 290 12 6 454 16 441 1.35e-31 127
MS.gene51634.t1 MTR_7g067330 25.156 481 288 13 3 476 7 422 1.54e-31 126
MS.gene51634.t1 MTR_8g064870 32.143 280 157 7 205 472 208 466 1.60e-31 127
MS.gene51634.t1 MTR_7g039550 30.159 252 141 6 246 477 23 259 1.87e-31 122
MS.gene51634.t1 MTR_6g042310 26.104 498 300 16 6 482 19 469 4.98e-31 125
MS.gene51634.t1 MTR_1g107375 24.597 496 287 14 6 472 9 446 5.47e-31 125
MS.gene51634.t1 MTR_1g032490 32.867 286 153 8 205 477 209 468 5.84e-31 125
MS.gene51634.t1 MTR_8g043470 37.097 186 95 4 266 450 184 348 9.73e-31 123
MS.gene51634.t1 MTR_8g006230 33.182 220 131 4 115 326 54 265 1.39e-30 120
MS.gene51634.t1 MTR_5g004940 34.862 218 109 5 259 476 190 374 2.01e-30 122
MS.gene51634.t1 MTR_7g067120 25.161 465 280 16 3 460 7 410 3.32e-30 122
MS.gene51634.t1 MTR_2g014900 33.061 245 138 4 212 454 211 431 3.37e-30 122
MS.gene51634.t1 MTR_1g090270 31.076 251 149 5 213 460 217 446 4.31e-30 122
MS.gene51634.t1 MTR_4g059370 34.021 194 115 2 270 460 190 373 3.72e-29 119
MS.gene51634.t1 MTR_8g068360 37.766 188 104 3 270 457 271 445 3.92e-29 119
MS.gene51634.t1 MTR_2g008226 35.981 214 115 4 244 453 249 444 5.29e-29 119
MS.gene51634.t1 MTR_3g479470 26.614 511 295 19 3 477 11 477 5.58e-29 119
MS.gene51634.t1 MTR_0477s0010 32.558 215 124 5 263 477 121 314 1.44e-28 115
MS.gene51634.t1 MTR_4g077960 25.910 467 273 15 14 459 1 415 1.78e-28 117
MS.gene51634.t1 MTR_8g064880 30.153 262 150 8 205 454 210 450 8.75e-28 116
MS.gene51634.t1 MTR_8g007565 34.500 200 109 4 268 467 269 446 1.16e-27 115
MS.gene51634.t1 MTR_8g007650 34.500 200 109 4 268 467 269 446 2.34e-27 114
MS.gene51634.t1 MTR_8g056740 28.344 314 159 10 117 425 57 309 6.45e-27 112
MS.gene51634.t1 MTR_2086s0010 35.326 184 100 5 294 477 5 169 8.27e-27 106
MS.gene51634.t1 MTR_1996s0010 35.326 184 100 5 294 477 5 169 8.27e-27 106
MS.gene51634.t1 MTR_6g036650 26.991 452 267 16 6 436 19 428 1.02e-26 112
MS.gene51634.t1 MTR_6g014300 23.636 385 229 11 113 477 124 463 1.73e-26 112
MS.gene51634.t1 MTR_5g066410 34.783 184 105 3 268 451 245 413 2.11e-26 111
MS.gene51634.t1 MTR_2g046620 25.996 477 276 16 6 459 17 439 2.70e-26 111
MS.gene51634.t1 MTR_3g435310 38.220 191 98 5 269 459 227 397 2.82e-26 110
MS.gene51634.t1 MTR_7g070760 28.631 241 104 5 196 421 18 205 4.66e-26 105
MS.gene51634.t1 MTR_5g072850 31.441 229 116 6 210 435 157 347 3.21e-25 107
MS.gene51634.t1 MTR_4g079270 30.830 253 150 5 207 457 207 436 7.32e-25 107
MS.gene51634.t1 MTR_0536s0030 40.000 150 79 3 339 477 200 349 1.50e-24 105
MS.gene51634.t1 MTR_5g098960 24.174 484 288 17 1 454 3 437 3.00e-24 105
MS.gene51634.t1 MTR_6g014185 31.496 254 108 8 210 455 124 319 4.84e-24 103
MS.gene51634.t1 MTR_4g079250 30.830 253 150 5 207 457 207 436 5.74e-24 104
MS.gene51634.t1 MTR_6g014160 27.826 345 171 13 113 435 104 392 3.07e-23 101
MS.gene51634.t1 MTR_2g083380 30.451 266 152 8 197 457 216 453 3.18e-23 102
MS.gene51634.t1 MTR_2g083480 33.180 217 126 5 244 457 236 436 3.87e-23 102
MS.gene51634.t1 MTR_5g066390 35.714 140 84 2 338 477 79 212 9.53e-23 96.7
MS.gene51634.t1 MTR_7g070995 35.714 140 81 2 346 476 2 141 1.07e-22 94.7
MS.gene51634.t1 MTR_2g083490 31.641 256 144 7 207 457 207 436 6.64e-22 98.6
MS.gene51634.t1 MTR_1g090280 31.765 170 103 2 294 460 137 296 2.64e-21 94.7
MS.gene51634.t1 MTR_6g014000 36.607 112 65 2 349 460 31 136 8.40e-21 95.5
MS.gene51634.t1 MTR_7g080960 26.891 238 102 4 247 478 298 469 1.65e-19 91.3
MS.gene51634.t1 MTR_2g083420 29.493 217 110 5 244 457 236 412 2.40e-19 90.5
MS.gene51634.t1 MTR_2g083430 33.488 215 124 5 244 455 236 434 3.55e-19 90.5
MS.gene51634.t1 MTR_2g083390 28.571 217 112 5 244 457 236 412 1.07e-16 82.4
MS.gene51634.t1 MTR_1g107325 33.871 124 80 2 346 468 219 341 6.03e-15 76.6
MS.gene51634.t1 MTR_0184s0010 38.043 92 56 1 388 479 4 94 1.18e-13 67.4
MS.gene51634.t1 MTR_2g086283 30.189 159 78 4 301 457 187 314 1.63e-13 72.0
MS.gene51634.t1 MTR_2g009740 38.614 101 43 2 263 363 197 278 5.65e-13 70.1
MS.gene51634.t1 MTR_6g014186 21.637 513 275 19 7 477 9 436 4.56e-12 68.2
MS.gene51634.t1 MTR_0475s0030 41.791 67 34 1 369 435 13 74 8.02e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51634.t1 AT3G16520 41.273 487 252 12 1 480 1 460 2.46e-117 352
MS.gene51634.t1 AT3G16520 40.977 471 244 12 1 464 1 444 1.97e-111 337
MS.gene51634.t1 AT3G16520 40.977 471 244 12 1 464 1 444 2.47e-111 337
MS.gene51634.t1 AT4G01070 35.967 481 281 9 6 480 9 468 1.56e-94 295
MS.gene51634.t1 AT1G01420 34.792 480 285 10 6 479 12 469 1.36e-90 285
MS.gene51634.t1 AT1G01420 34.792 480 285 10 6 479 9 466 1.66e-90 284
MS.gene51634.t1 AT1G01390 35.908 479 282 9 6 479 26 484 7.25e-86 273
MS.gene51634.t1 AT1G01390 35.908 479 282 9 6 479 9 467 7.71e-86 272
MS.gene51634.t1 AT3G21800 34.455 505 271 19 1 477 1 473 8.96e-80 256
MS.gene51634.t1 AT3G50740 33.753 477 277 11 1 462 3 455 7.17e-79 254
MS.gene51634.t1 AT3G21750 34.280 493 290 14 2 482 1 471 3.40e-76 247
MS.gene51634.t1 AT3G21760 34.578 509 279 17 2 482 1 483 7.99e-76 246
MS.gene51634.t1 AT4G15280 33.199 497 295 15 2 482 1 476 1.16e-75 246
MS.gene51634.t1 AT4G15280 33.199 497 295 15 2 482 33 508 2.61e-75 246
MS.gene51634.t1 AT1G07250 33.267 499 280 16 1 476 1 469 5.72e-75 244
MS.gene51634.t1 AT3G21790 34.455 505 273 17 2 477 1 476 9.06e-75 244
MS.gene51634.t1 AT5G26310 32.083 480 288 14 1 469 3 455 5.82e-73 238
MS.gene51634.t1 AT2G29730 29.796 490 299 13 1 476 1 459 2.71e-72 236
MS.gene51634.t1 AT3G21780 33.134 501 285 17 2 482 1 471 5.51e-72 236
MS.gene51634.t1 AT4G36770 32.391 460 280 12 11 462 10 446 9.26e-72 235
MS.gene51634.t1 AT2G29710 30.612 490 297 12 1 477 1 460 1.15e-70 232
MS.gene51634.t1 AT1G07240 29.821 503 297 14 1 477 1 473 1.27e-69 230
MS.gene51634.t1 AT5G66690 33.263 472 271 16 1 458 3 444 2.18e-68 226
MS.gene51634.t1 AT2G18570 32.135 473 294 12 7 472 7 459 4.40e-68 225
MS.gene51634.t1 AT1G07260 31.365 491 286 13 7 477 10 469 5.15e-68 225
MS.gene51634.t1 AT2G29740 31.400 500 285 17 3 477 6 472 7.21e-64 214
MS.gene51634.t1 AT4G15260 35.013 377 211 13 120 482 1 357 1.95e-63 210
MS.gene51634.t1 AT2G18560 34.711 363 216 8 116 472 22 369 4.79e-63 209
MS.gene51634.t1 AT2G15480 30.273 512 279 16 6 480 11 481 6.58e-61 207
MS.gene51634.t1 AT2G15490 30.214 513 281 16 6 480 8 481 3.77e-60 205
MS.gene51634.t1 AT2G29750 29.193 483 290 16 6 459 9 468 1.26e-59 203
MS.gene51634.t1 AT2G15490 30.214 513 278 16 6 480 8 478 1.51e-59 203
MS.gene51634.t1 AT5G14860 29.435 513 271 17 7 477 10 473 5.57e-59 202
MS.gene51634.t1 AT2G15480 29.693 522 279 17 6 480 11 491 2.05e-58 201
MS.gene51634.t1 AT4G34131 30.906 508 280 19 3 477 8 477 1.37e-57 198
MS.gene51634.t1 AT2G16890 30.204 490 290 15 6 477 10 465 4.43e-55 191
MS.gene51634.t1 AT4G34138 29.307 505 290 14 3 477 9 476 8.18e-53 186
MS.gene51634.t1 AT1G10400 29.842 506 284 17 3 482 5 465 7.06e-52 182
MS.gene51634.t1 AT3G53160 37.676 284 139 7 212 477 217 480 1.01e-51 182
MS.gene51634.t1 AT4G01070 32.312 359 217 8 6 359 9 346 2.40e-51 178
MS.gene51634.t1 AT2G36780 29.159 511 282 16 7 477 16 486 3.12e-50 179
MS.gene51634.t1 AT1G22400 30.408 490 272 16 3 461 11 462 7.63e-50 177
MS.gene51634.t1 AT2G31790 31.827 509 251 22 3 476 6 453 1.15e-49 176
MS.gene51634.t1 AT4G34135 30.297 472 255 17 3 439 9 441 2.17e-49 176
MS.gene51634.t1 AT2G36770 28.770 504 293 19 7 477 16 486 2.72e-49 176
MS.gene51634.t1 AT1G05675 30.642 483 283 15 6 476 7 449 1.02e-48 174
MS.gene51634.t1 AT1G22360 30.185 487 276 18 3 461 8 458 1.42e-48 174
MS.gene51634.t1 AT1G73880 28.770 504 279 18 3 477 12 464 2.00e-48 173
MS.gene51634.t1 AT2G36800 30.000 500 293 19 7 477 14 485 3.25e-48 173
MS.gene51634.t1 AT1G05680 30.165 484 284 16 6 476 7 449 4.82e-48 172
MS.gene51634.t1 AT1G78270 27.443 481 283 14 10 461 18 461 5.95e-48 172
MS.gene51634.t1 AT2G36750 29.307 505 288 20 7 477 12 481 9.87e-48 172
MS.gene51634.t1 AT5G59590 29.508 488 285 16 3 478 8 448 1.26e-47 171
MS.gene51634.t1 AT2G36760 28.185 518 278 18 7 477 16 486 3.60e-47 171
MS.gene51634.t1 AT2G30140 29.835 486 276 18 6 477 14 448 6.95e-47 169
MS.gene51634.t1 AT2G16890 29.530 447 264 14 6 435 10 422 8.79e-47 168
MS.gene51634.t1 AT5G59580 29.532 491 282 17 2 478 6 446 2.15e-46 167
MS.gene51634.t1 AT2G30140 29.979 487 275 19 6 477 14 449 3.10e-46 167
MS.gene51634.t1 AT1G22340 28.764 518 277 17 3 477 11 479 1.05e-45 166
MS.gene51634.t1 AT5G03490 27.755 490 287 14 6 477 20 460 1.92e-45 165
MS.gene51634.t1 AT2G31750 28.543 494 285 17 3 476 6 451 2.70e-45 164
MS.gene51634.t1 AT2G43840 28.333 480 275 12 6 468 8 435 3.75e-45 164
MS.gene51634.t1 AT2G43820 27.755 490 281 15 6 476 8 443 6.18e-45 163
MS.gene51634.t1 AT2G31750 28.543 494 285 17 3 476 6 451 7.35e-45 164
MS.gene51634.t1 AT2G36790 30.478 502 287 19 7 477 15 485 2.49e-44 162
MS.gene51634.t1 AT3G55700 29.209 493 273 19 6 476 9 447 3.30e-44 162
MS.gene51634.t1 AT1G22380 29.681 502 259 20 3 461 11 461 5.45e-44 162
MS.gene51634.t1 AT2G43840 27.197 478 283 9 6 468 8 435 7.75e-44 160
MS.gene51634.t1 AT3G46680 30.081 492 276 18 3 477 7 447 7.83e-44 160
MS.gene51634.t1 AT1G24100 28.600 507 275 15 2 478 8 457 9.89e-44 160
MS.gene51634.t1 AT2G36970 28.081 495 284 16 3 468 8 459 4.05e-43 159
MS.gene51634.t1 AT3G46660 29.897 485 285 14 3 476 12 452 8.55e-43 157
MS.gene51634.t1 AT3G11340 28.125 480 294 13 3 476 7 441 9.31e-43 157
MS.gene51634.t1 AT1G22360 28.747 487 271 19 3 461 8 446 2.88e-42 156
MS.gene51634.t1 AT5G12890 37.500 240 135 6 244 477 249 479 5.63e-42 156
MS.gene51634.t1 AT1G51210 28.151 476 259 15 2 454 17 432 6.99e-42 155
MS.gene51634.t1 AT3G46650 28.361 476 277 16 3 472 8 425 1.36e-41 154
MS.gene51634.t1 AT3G46690 29.495 495 281 16 3 480 7 450 2.11e-40 151
MS.gene51634.t1 AT2G30150 27.642 492 281 18 6 477 14 450 2.65e-40 151
MS.gene51634.t1 AT3G46700 27.801 482 295 15 3 477 7 442 6.76e-40 149
MS.gene51634.t1 AT2G30150 27.664 488 278 18 10 477 2 434 9.33e-40 149
MS.gene51634.t1 AT5G38010 29.006 493 285 19 3 478 8 452 7.94e-39 147
MS.gene51634.t1 AT3G46670 28.834 489 277 16 6 476 10 445 9.67e-39 146
MS.gene51634.t1 AT3G55710 28.257 499 274 19 6 476 9 451 1.08e-38 147
MS.gene51634.t1 AT2G23260 33.333 288 152 5 197 472 187 446 7.62e-38 144
MS.gene51634.t1 AT5G05870 28.893 488 285 18 6 476 9 451 8.21e-38 144
MS.gene51634.t1 AT1G22370 28.834 489 290 14 3 468 11 464 5.59e-36 139
MS.gene51634.t1 AT3G46720 29.098 488 277 18 3 477 7 438 6.23e-36 139
MS.gene51634.t1 AT5G05860 27.984 486 282 17 6 475 10 443 1.44e-35 137
MS.gene51634.t1 AT5G05880 26.708 483 296 16 6 476 9 445 2.71e-35 137
MS.gene51634.t1 AT2G26480 28.719 484 284 16 6 477 9 443 9.48e-35 135
MS.gene51634.t1 AT5G17050 28.418 373 224 9 113 477 117 454 1.81e-34 135
MS.gene51634.t1 AT3G21560 28.718 390 249 13 94 477 104 470 1.93e-34 135
MS.gene51634.t1 AT5G05890 26.680 491 290 17 6 476 9 449 3.43e-34 134
MS.gene51634.t1 AT3G53150 28.166 529 277 22 7 477 24 507 5.58e-34 134
MS.gene51634.t1 AT1G06000 34.926 272 152 9 212 476 177 430 6.00e-34 133
MS.gene51634.t1 AT5G49690 26.923 494 284 16 6 477 11 449 6.58e-34 133
MS.gene51634.t1 AT3G02100 26.482 506 286 16 1 477 9 457 7.29e-34 133
MS.gene51634.t1 AT4G15550 34.328 268 150 8 213 477 227 471 7.62e-34 133
MS.gene51634.t1 AT5G17040 29.539 369 217 11 113 476 106 436 1.10e-33 132
MS.gene51634.t1 AT1G22370 35.985 264 128 7 210 461 52 286 5.21e-33 127
MS.gene51634.t1 AT5G17030 32.727 275 148 9 207 477 212 453 6.14e-33 130
MS.gene51634.t1 AT1G30530 30.220 364 209 13 113 468 113 439 6.70e-33 130
MS.gene51634.t1 AT2G28080 28.060 335 206 8 113 439 127 434 7.02e-33 130
MS.gene51634.t1 AT2G23250 30.634 284 162 5 200 476 177 432 7.52e-33 130
MS.gene51634.t1 AT5G05900 27.088 491 283 18 6 476 9 444 1.14e-32 129
MS.gene51634.t1 AT5G65550 31.760 233 131 4 244 465 243 458 1.99e-32 129
MS.gene51634.t1 AT1G05560 33.449 287 165 9 196 477 184 449 4.17e-32 128
MS.gene51634.t1 AT1G05560 33.449 287 165 9 196 477 234 499 4.66e-32 129
MS.gene51634.t1 AT4G15480 32.632 285 153 9 205 477 219 476 7.33e-32 128
MS.gene51634.t1 AT4G14090 28.061 392 229 12 100 477 101 453 1.56e-31 126
MS.gene51634.t1 AT5G38040 27.083 480 283 19 15 478 20 448 7.69e-31 124
MS.gene51634.t1 AT5G17040 30.847 295 168 8 187 477 73 335 9.38e-31 122
MS.gene51634.t1 AT4G15500 26.265 415 250 13 83 481 90 464 2.35e-30 123
MS.gene51634.t1 AT1G05530 30.822 292 169 9 197 478 185 453 9.60e-30 121
MS.gene51634.t1 AT4G15490 26.617 402 252 12 85 476 95 463 2.24e-29 120
MS.gene51634.t1 AT3G22250 26.078 487 277 21 3 458 6 440 7.04e-29 119
MS.gene51634.t1 AT2G22590 34.483 232 129 6 244 465 247 465 4.29e-28 117
MS.gene51634.t1 AT5G54060 26.789 489 305 16 5 477 13 464 5.91e-25 107
MS.gene51634.t1 AT1G64910 31.163 215 130 5 245 457 221 419 1.36e-24 106
MS.gene51634.t1 AT5G54010 27.222 360 227 12 127 480 121 451 9.44e-24 103
MS.gene51634.t1 AT3G29630 27.419 248 162 3 214 456 187 421 2.16e-23 102
MS.gene51634.t1 AT5G37950 29.592 294 174 13 107 393 77 344 6.70e-23 100
MS.gene51634.t1 AT5G37950 29.452 292 171 12 107 393 77 338 7.54e-23 99.8
MS.gene51634.t1 AT5G53990 27.559 254 164 6 206 457 184 419 2.14e-22 100
MS.gene51634.t1 AT4G27570 28.629 248 156 5 214 456 193 424 1.13e-21 97.8
MS.gene51634.t1 AT1G64920 31.193 218 128 6 245 456 221 422 1.52e-21 97.4
MS.gene51634.t1 AT1G50580 27.600 250 162 5 212 456 184 419 2.55e-21 96.7
MS.gene51634.t1 AT4G27560 27.306 271 176 5 214 481 193 445 4.27e-21 96.3
MS.gene51634.t1 AT2G22930 27.016 248 160 6 214 456 187 418 5.65e-21 95.5
MS.gene51634.t1 AT3G29630 30.000 190 118 2 269 456 219 395 2.59e-20 93.6
MS.gene51634.t1 AT4G09500 28.372 215 136 5 245 457 221 419 5.30e-19 89.7
MS.gene51634.t1 AT4G09500 30.055 183 112 4 277 457 226 394 5.51e-18 86.3
MS.gene51634.t1 AT4G34135 27.193 342 197 13 3 315 9 327 3.94e-17 82.8
MS.gene51634.t1 AT2G16890 25.157 318 207 12 6 308 10 311 1.16e-11 66.2
MS.gene51634.t1 AT2G16890 25.157 318 207 12 6 308 10 311 1.16e-11 66.2

Find 161 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGATGCATTTGGAGAATT+TGG 0.134056 3.4:-4528439 MS.gene51634:CDS
GTTTACTATTTCTTCACTTC+TGG 0.180115 3.4:-4529781 MS.gene51634:CDS
CACTTCTGGAGCTGCTGTTT+TGG 0.181737 3.4:-4529767 MS.gene51634:CDS
CACCACCAGGCCCCTCTCTT+TGG 0.227109 3.4:+4528774 None:intergenic
ATAGGGAAGATCCTGCTTAT+TGG 0.284611 3.4:-4529615 MS.gene51634:CDS
TTTCTGTGAGCATCTTTCTA+TGG 0.302336 3.4:-4529581 MS.gene51634:CDS
TTGAGTGATCTGACGGAGTT+TGG 0.320708 3.4:+4529882 None:intergenic
TAGGGAAGATCCTGCTTATT+GGG 0.325243 3.4:-4529614 MS.gene51634:CDS
GAAGAGGGTGAGAGAGTTGA+TGG 0.333313 3.4:-4528518 MS.gene51634:CDS
GTTTCGTTCCAAGATGTTCT+TGG 0.336079 3.4:+4528863 None:intergenic
CTCCTCCCGTTTACTGCATT+GGG 0.349106 3.4:-4529462 MS.gene51634:CDS
GGTGAATACATTTCGTGAAT+TGG 0.378736 3.4:-4529545 MS.gene51634:CDS
GGGATGCATTTGGAGAATTT+GGG 0.379687 3.4:-4528438 MS.gene51634:CDS
CCTCCTCCCGTTTACTGCAT+TGG 0.380127 3.4:-4529463 MS.gene51634:CDS
GGAGTGGACACAGATTCTTA+TGG 0.381434 3.4:-4528903 MS.gene51634:CDS
AAACGGTGGAAGGAAATTAA+AGG 0.383761 3.4:+4529994 None:intergenic
GAAGTGAAGAAATAGTAAAC+AGG 0.385693 3.4:+4529784 None:intergenic
GACTCAGAACCTTGACTTGT+GGG 0.386914 3.4:+4528740 None:intergenic
ATTGGAAGTTGTGGCGGTTA+AGG 0.398684 3.4:-4529527 MS.gene51634:CDS
GGCAGTATCGTTCAAGGAAA+TGG 0.401533 3.4:-4529707 MS.gene51634:CDS
CAATGGCCCAATGCAGTAAA+CGG 0.401654 3.4:+4529456 None:intergenic
CACAAAAGCATTAGCCAACT+TGG 0.403057 3.4:-4528410 MS.gene51634:CDS
TGCCGGGACCAGTTCTTGAT+AGG 0.403291 3.4:-4529633 MS.gene51634:CDS
ATGCAGAGCAGCATGTTAAT+AGG 0.411165 3.4:-4528624 MS.gene51634:CDS
GAGTGGACACAGATTCTTAT+GGG 0.412526 3.4:-4528902 MS.gene51634:CDS
GGCTGTTGCGGTGGAGCAAA+GGG 0.425928 3.4:-4528575 MS.gene51634:CDS
TGCAATGGCCATGCAATCAT+TGG 0.435724 3.4:+4528646 None:intergenic
GGAGGACTTCGTTTGAGATC+CGG 0.437926 3.4:+4529481 None:intergenic
GGGGCCTGGTGGTGAACTCG+TGG 0.443913 3.4:-4528765 MS.gene51634:CDS
AAACAAGTTCACGATACAAC+AGG 0.444607 3.4:-4528844 MS.gene51634:CDS
GTGTTGGAAGGAGTGGTTGC+TGG 0.449708 3.4:-4528673 MS.gene51634:CDS
GCATTCAACGGCGCATTCCC+CGG 0.451889 3.4:+4529664 None:intergenic
ATTCTCGCTGGCACAATTGA+AGG 0.452570 3.4:-4528947 MS.gene51634:CDS
AGCGTGGTGTACTTGTGTTT+TGG 0.457675 3.4:-4528982 MS.gene51634:CDS
GTTGAATGCAGCGTTGATGC+CGG 0.460609 3.4:-4529650 MS.gene51634:CDS
ATTGCTGACCCTCAACAATC+AGG 0.462832 3.4:-4529433 MS.gene51634:intron
ACAACAGGGGAGTTTGAGTT+GGG 0.464359 3.4:-4528829 MS.gene51634:CDS
CAAGGTTCTGAGTCGCGAAT+CGG 0.467089 3.4:-4528731 MS.gene51634:CDS
ACTCAAAGCTTAGCCGCAAC+CGG 0.467871 3.4:-4529943 MS.gene51634:CDS
GGTTTGCAAGTCACTGTGGC+TGG 0.476369 3.4:-4528702 MS.gene51634:CDS
CGAAGTTCAAAGACATGGCT+AGG 0.477806 3.4:-4528459 MS.gene51634:CDS
GTTTGTGACCGGAGAGGAAG+TGG 0.480939 3.4:-4528542 MS.gene51634:CDS
TGGCTGTTGCGGTGGAGCAA+AGG 0.481698 3.4:-4528576 MS.gene51634:CDS
CCTCTTCTCCACTTCCTCTC+CGG 0.485034 3.4:+4528534 None:intergenic
GGCATCAACGCTGCATTCAA+CGG 0.485482 3.4:+4529652 None:intergenic
GGATCTTCCCTATCAAGAAC+TGG 0.485880 3.4:+4529625 None:intergenic
ATCACAATGCTTCTCACCAC+TGG 0.487374 3.4:-4530072 MS.gene51634:CDS
ATGATGATGACTGAGAAGTT+TGG 0.487704 3.4:+4530116 None:intergenic
ATTCCATGTTTGAACCAAGT+TGG 0.488059 3.4:+4528396 None:intergenic
TATGAATTGGAATCCGGTTG+CGG 0.489284 3.4:+4529930 None:intergenic
CCCGAAAATTCACAGCGAAA+CGG 0.489492 3.4:-4529728 MS.gene51634:CDS
TACAACAGGGGAGTTTGAGT+TGG 0.490227 3.4:-4528830 MS.gene51634:CDS
AATGGCCCAATGCAGTAAAC+GGG 0.494251 3.4:+4529457 None:intergenic
GAGTTGATGGAATTTGAGAG+AGG 0.495991 3.4:-4528505 MS.gene51634:CDS
TGGAGTTGAGATTGTGATGC+CGG 0.498474 3.4:-4529683 MS.gene51634:CDS
AGTTGATGGAATTTGAGAGA+GGG 0.502047 3.4:-4528504 MS.gene51634:CDS
CTGAGTCGCGAATCGGTTGG+TGG 0.502280 3.4:-4528724 MS.gene51634:CDS
TTGAATGCAGCGTTGATGCC+GGG 0.508468 3.4:-4529649 MS.gene51634:CDS
CGGAGAGGAAGTGGAGAAGA+GGG 0.512891 3.4:-4528533 MS.gene51634:CDS
TACAACATCTCCCAATAAGC+AGG 0.513583 3.4:+4529604 None:intergenic
TCCCTATCAAGAACTGGTCC+CGG 0.518314 3.4:+4529631 None:intergenic
GGAGTTGAGATTGTGATGCC+GGG 0.520848 3.4:-4529682 MS.gene51634:CDS
ATGGAAGTTGCTTCCACCAT+GGG 0.521637 3.4:-4529811 MS.gene51634:CDS
TGGAGCAAAGGGAAGGCGAT+GGG 0.521732 3.4:-4528564 MS.gene51634:CDS
GACATGGCTAGGGATGCATT+TGG 0.521820 3.4:-4528448 MS.gene51634:CDS
TTGATGTATGAGTCGATGGA+TGG 0.526854 3.4:+4530036 None:intergenic
TGAGTCGCGAATCGGTTGGT+GGG 0.526961 3.4:-4528723 MS.gene51634:CDS
CGACTCAGAACCTTGACTTG+TGG 0.527632 3.4:+4528739 None:intergenic
CGAAACGGCAGTATCGTTCA+AGG 0.528696 3.4:-4529713 MS.gene51634:CDS
AGGCCACTCCAAGAACATCT+TGG 0.529924 3.4:-4528871 MS.gene51634:CDS
ATTTCGTGAATTGGAAGTTG+TGG 0.531717 3.4:-4529536 MS.gene51634:CDS
GCAAAACATATCGATAATGA+AGG 0.532201 3.4:+4529843 None:intergenic
GAAGGCGATGGGTTTGTGAC+CGG 0.539657 3.4:-4528553 MS.gene51634:CDS
TTCTATGGCAAAGGGAATTG+TGG 0.540548 3.4:-4529566 MS.gene51634:CDS
GAAGGAAATAGCTGAAGGGT+TGG 0.542682 3.4:-4528929 MS.gene51634:CDS
CCGGAGAGGAAGTGGAGAAG+AGG 0.544962 3.4:-4528534 MS.gene51634:CDS
TGTTGAGGGTCAGCAATCAA+TGG 0.545084 3.4:+4529439 None:intergenic
AAGTCACTGTGGCTGGAACT+CGG 0.545392 3.4:-4528695 MS.gene51634:CDS
GTGGAGCAAAGGGAAGGCGA+TGG 0.548726 3.4:-4528565 MS.gene51634:CDS
GCGGTTAAGGCCGTTGAAGA+CGG 0.549441 3.4:-4529514 MS.gene51634:CDS
GAGGGAAAGAGATAAGAGAG+AGG 0.550051 3.4:-4528486 MS.gene51634:CDS
AACGGTGGAAGGAAATTAAA+GGG 0.550712 3.4:+4529995 None:intergenic
GGGCCTGGTGGTGAACTCGT+GGG 0.550875 3.4:-4528764 MS.gene51634:CDS
AAATAGCTGAAGGGTTGGAG+AGG 0.551079 3.4:-4528924 MS.gene51634:CDS
GAGCATCTTTCTATGGCAAA+GGG 0.553841 3.4:-4529574 MS.gene51634:CDS
CCAATGCAGTAAACGGGAGG+AGG 0.557737 3.4:+4529463 None:intergenic
AGTCGATGGATGGGTGGTCG+AGG 0.557824 3.4:+4530046 None:intergenic
GAGAACCAAAGAGAGGGGCC+TGG 0.558892 3.4:-4528779 MS.gene51634:CDS
CTGTGGCTGGAACTCGGTGT+TGG 0.562921 3.4:-4528689 MS.gene51634:CDS
GATTCTTATGGGTTGTGAAG+AGG 0.563875 3.4:-4528891 MS.gene51634:CDS
CTCGTGGGCCCCACAAGTCA+AGG 0.564274 3.4:-4528749 MS.gene51634:CDS
CTGGTGTGCCAATGATTGCA+TGG 0.565400 3.4:-4528654 MS.gene51634:CDS
GATAATGAAGGATTTGATAA+CGG 0.566024 3.4:+4529855 None:intergenic
TGAGCATCTTTCTATGGCAA+AGG 0.566798 3.4:-4529575 MS.gene51634:CDS
GGCTGGAACTCGGTGTTGGA+AGG 0.569349 3.4:-4528685 MS.gene51634:CDS
AAAACACGCACCGTCTTCAA+CGG 0.570679 3.4:+4529504 None:intergenic
TGACGGTGACAGAAGGGAAA+CGG 0.571233 3.4:+4529977 None:intergenic
GTTCCAAGATGTTCTTGGAG+TGG 0.572093 3.4:+4528868 None:intergenic
CATGAAGGTGGCTGTTGCGG+TGG 0.573731 3.4:-4528584 MS.gene51634:CDS
GAGTGAGTGACGGTGACAGA+AGG 0.574480 3.4:+4529970 None:intergenic
GGACATGAAGGTGGCTGTTG+CGG 0.577994 3.4:-4528587 MS.gene51634:CDS
GCCGGGACCAGTTCTTGATA+GGG 0.578651 3.4:-4529632 MS.gene51634:CDS
ACATGCTGCTCTGCATGCAA+TGG 0.581236 3.4:+4528631 None:intergenic
GTATCGTTCAAGGAAATGGT+TGG 0.582082 3.4:-4529703 MS.gene51634:CDS
AAGTACACCACGCTTCTACT+CGG 0.585941 3.4:+4528991 None:intergenic
TAGCCAACTTGGTTCAAACA+TGG 0.588302 3.4:-4528399 MS.gene51634:CDS
CATGGTGGAAGCAACTTCCA+TGG 0.589515 3.4:+4529813 None:intergenic
GTTCTCTCTATAAACCCACT+TGG 0.590775 3.4:+4528796 None:intergenic
CGGAGGTTTGAGTGATCTGA+CGG 0.596107 3.4:+4529875 None:intergenic
GTTGCGGTGGAGCAAAGGGA+AGG 0.596270 3.4:-4528571 MS.gene51634:CDS
TGTGATGGTGAAGGACATGA+AGG 0.599172 3.4:-4528599 MS.gene51634:CDS
TGAACTGACCTGATTGTTGA+GGG 0.599866 3.4:+4529425 None:intergenic
CATGGAAGTTGCTTCCACCA+TGG 0.599869 3.4:-4529812 MS.gene51634:CDS
AGTGAGTGACGGTGACAGAA+GGG 0.601833 3.4:+4529971 None:intergenic
AACAAGTTCACGATACAACA+GGG 0.601950 3.4:-4528843 MS.gene51634:CDS
TATAGAGAGAACCAAAGAGA+GGG 0.602235 3.4:-4528785 MS.gene51634:CDS
GCGGTTGATGTATGAGTCGA+TGG 0.609079 3.4:+4530032 None:intergenic
ATGTGACCTACCGTTGGTGA+TGG 0.610850 3.4:+4530159 None:intergenic
GGTAGGTCACATAATTTCCA+TGG 0.612027 3.4:-4530148 MS.gene51634:CDS
ACTCAGAACCTTGACTTGTG+GGG 0.612516 3.4:+4528741 None:intergenic
GGGCCCACGAGTTCACCACC+AGG 0.613013 3.4:+4528761 None:intergenic
ACAGCAAAGATTGCTTGTCA+TGG 0.615387 3.4:-4529026 MS.gene51634:CDS
CAATTGAAGGAAATAGCTGA+AGG 0.616309 3.4:-4528934 MS.gene51634:CDS
GCTGAAGGGTTGGAGAGGAG+TGG 0.621131 3.4:-4528919 MS.gene51634:CDS
AAGCCGAGGATCATTCTCGC+TGG 0.622790 3.4:-4528959 MS.gene51634:CDS
TGATGTATGAGTCGATGGAT+GGG 0.628238 3.4:+4530037 None:intergenic
TCGTGAATTGGAAGTTGTGG+CGG 0.628289 3.4:-4529533 MS.gene51634:CDS
GACAGAAGGGAAACGGTGGA+AGG 0.632321 3.4:+4529984 None:intergenic
GAACTCGGTGTTGGAAGGAG+TGG 0.634130 3.4:-4528680 MS.gene51634:CDS
AAGTTTGGCTAATTCTACCA+TGG 0.634627 3.4:+4530131 None:intergenic
GAAGTTCAAAGACATGGCTA+GGG 0.638110 3.4:-4528458 MS.gene51634:CDS
AATGAAGGATTTGATAACGG+AGG 0.642216 3.4:+4529858 None:intergenic
AAGTGAAGAAATAGTAAACA+GGG 0.642613 3.4:+4529785 None:intergenic
AGTGGTGAGAAGCATTGTGA+TGG 0.644289 3.4:+4530074 None:intergenic
GTGAACTGACCTGATTGTTG+AGG 0.647752 3.4:+4529424 None:intergenic
AACCAAAGAGAGGGGCCTGG+TGG 0.650267 3.4:-4528776 MS.gene51634:CDS
TTATAGAGAGAACCAAAGAG+AGG 0.650534 3.4:-4528786 MS.gene51634:CDS
GTGCCAGCGAGAATGATCCT+CGG 0.651703 3.4:+4528956 None:intergenic
GGCCCAATGCAGTAAACGGG+AGG 0.653379 3.4:+4529460 None:intergenic
AAGGGTGAGACGTTGAGATG+CGG 0.656933 3.4:+4530013 None:intergenic
GAGTTCGAAGTTCAAAGACA+TGG 0.662945 3.4:-4528464 MS.gene51634:CDS
ATGTATCCATCACCAACGGT+AGG 0.665217 3.4:-4530165 MS.gene51634:CDS
GTAAACAGGGATTCCCATGG+TGG 0.669763 3.4:+4529798 None:intergenic
AATTGAAGGAAATAGCTGAA+GGG 0.673025 3.4:-4528933 MS.gene51634:CDS
CGATGGGTTTGTGACCGGAG+AGG 0.673323 3.4:-4528548 MS.gene51634:CDS
GTTCTGAGTCGCGAATCGGT+TGG 0.674173 3.4:-4528727 MS.gene51634:CDS
ATAGTAAACAGGGATTCCCA+TGG 0.674729 3.4:+4529795 None:intergenic
TAATAGGAATGTGATGGTGA+AGG 0.675374 3.4:-4528608 MS.gene51634:CDS
GAAATTATGTGACCTACCGT+TGG 0.681835 3.4:+4530153 None:intergenic
TGGGTGGTCGAGGAAGCCAG+TGG 0.682437 3.4:+4530056 None:intergenic
ATAGAGAGAACCAAAGAGAG+GGG 0.683932 3.4:-4528784 MS.gene51634:CDS
GCATGTTAATAGGAATGTGA+TGG 0.685419 3.4:-4528614 MS.gene51634:CDS
TGTATGAGTCGATGGATGGG+TGG 0.689430 3.4:+4530040 None:intergenic
CGGTGACAGAAGGGAAACGG+TGG 0.691763 3.4:+4529980 None:intergenic
GGTGGGTTTGCAAGTCACTG+TGG 0.692504 3.4:-4528706 MS.gene51634:CDS
GAGTTGAGATTGTGATGCCG+GGG 0.697698 3.4:-4529681 MS.gene51634:CDS
AGTGATGTATCCATCACCAA+CGG 0.698862 3.4:-4530169 MS.gene51634:CDS
TAAACAACCGAGTAGAAGCG+TGG 0.706005 3.4:-4528998 MS.gene51634:CDS
TTGAGTGTTAGAGTGAGTGA+CGG 0.719566 3.4:+4529960 None:intergenic
GATGGTGAAGGACATGAAGG+TGG 0.746150 3.4:-4528596 MS.gene51634:CDS
ACAAGTTCACGATACAACAG+GGG 0.761968 3.4:-4528842 MS.gene51634:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAGGAAAAGAAATTAAAT+TGG + chr3.4:4529336-4529355 None:intergenic 20.0%
!!! ATCAATGCTTCATTTTTTAT+CGG + chr3.4:4529497-4529516 None:intergenic 20.0%
! AAGTGAAGAAATAGTAAACA+GGG + chr3.4:4528791-4528810 None:intergenic 25.0%
! GATAATGAAGGATTTGATAA+CGG + chr3.4:4528721-4528740 None:intergenic 25.0%
!! CAACGTTTCTTTTTATGAAT+TGG + chr3.4:4528659-4528678 None:intergenic 25.0%
!! TCTTTTTATGAATTGGAATC+CGG + chr3.4:4528652-4528671 None:intergenic 25.0%
!! TTTTTATGAAGCGAAATAAG+TGG - chr3.4:4529191-4529210 MS.gene51634:intron 25.0%
AATTGAAGGAAATAGCTGAA+GGG - chr3.4:4529640-4529659 MS.gene51634:CDS 30.0%
AGACATACAAATAGATTGCA+TGG + chr3.4:4529405-4529424 None:intergenic 30.0%
GAAGTGAAGAAATAGTAAAC+AGG + chr3.4:4528792-4528811 None:intergenic 30.0%
GCAAAACATATCGATAATGA+AGG + chr3.4:4528733-4528752 None:intergenic 30.0%
! GTTTACTATTTCTTCACTTC+TGG - chr3.4:4528792-4528811 MS.gene51634:CDS 30.0%
!! AGTGGTCTTATGGTAAAATT+AGG - chr3.4:4529209-4529228 MS.gene51634:intron 30.0%
AAACAAGTTCACGATACAAC+AGG - chr3.4:4529729-4529748 MS.gene51634:CDS 35.0%
AAACGGTGGAAGGAAATTAA+AGG + chr3.4:4528582-4528601 None:intergenic 35.0%
AACAAGTTCACGATACAACA+GGG - chr3.4:4529730-4529749 MS.gene51634:CDS 35.0%
AACGGTGGAAGGAAATTAAA+GGG + chr3.4:4528581-4528600 None:intergenic 35.0%
AACTTACAAATGATAGTCGC+TGG + chr3.4:4529259-4529278 None:intergenic 35.0%
AAGTTTGGCTAATTCTACCA+TGG + chr3.4:4528445-4528464 None:intergenic 35.0%
ATTCCATGTTTGAACCAAGT+TGG + chr3.4:4530180-4530199 None:intergenic 35.0%
ATTTCGTGAATTGGAAGTTG+TGG - chr3.4:4529037-4529056 MS.gene51634:CDS 35.0%
CAATTGAAGGAAATAGCTGA+AGG - chr3.4:4529639-4529658 MS.gene51634:CDS 35.0%
GCATGTTAATAGGAATGTGA+TGG - chr3.4:4529959-4529978 MS.gene51634:CDS 35.0%
GGTGAATACATTTCGTGAAT+TGG - chr3.4:4529028-4529047 MS.gene51634:CDS 35.0%
GTACATTCATAACCAAGTGT+AGG - chr3.4:4529379-4529398 MS.gene51634:intron 35.0%
TATAGAGAGAACCAAAGAGA+GGG - chr3.4:4529788-4529807 MS.gene51634:CDS 35.0%
TTATAGAGAGAACCAAAGAG+AGG - chr3.4:4529787-4529806 MS.gene51634:CDS 35.0%
TTTCTGTGAGCATCTTTCTA+TGG - chr3.4:4528992-4529011 MS.gene51634:CDS 35.0%
! AAGCGAAATAAGTGGTCTTA+TGG - chr3.4:4529199-4529218 MS.gene51634:intron 35.0%
! ATGATGATGACTGAGAAGTT+TGG + chr3.4:4528460-4528479 None:intergenic 35.0%
! TAATAGGAATGTGATGGTGA+AGG - chr3.4:4529965-4529984 MS.gene51634:CDS 35.0%
! TTCTATACCAGCTGATTCAT+AGG + chr3.4:4529353-4529372 None:intergenic 35.0%
! TTCTTTTCCTATGAATCAGC+TGG - chr3.4:4529343-4529362 MS.gene51634:intron 35.0%
!! AATGAAGGATTTGATAACGG+AGG + chr3.4:4528718-4528737 None:intergenic 35.0%
!! AGTTGATGGAATTTGAGAGA+GGG - chr3.4:4530069-4530088 MS.gene51634:CDS 35.0%
ACAAGTTCACGATACAACAG+GGG - chr3.4:4529731-4529750 MS.gene51634:CDS 40.0%
ACAGCAAAGATTGCTTGTCA+TGG - chr3.4:4529547-4529566 MS.gene51634:CDS 40.0%
AGGGATGCATTTGGAGAATT+TGG - chr3.4:4530134-4530153 MS.gene51634:CDS 40.0%
AGTGATGTATCCATCACCAA+CGG - chr3.4:4528404-4528423 MS.gene51634:CDS 40.0%
ATAGAGAGAACCAAAGAGAG+GGG - chr3.4:4529789-4529808 MS.gene51634:CDS 40.0%
ATAGGGAAGATCCTGCTTAT+TGG - chr3.4:4528958-4528977 MS.gene51634:CDS 40.0%
ATAGTAAACAGGGATTCCCA+TGG + chr3.4:4528781-4528800 None:intergenic 40.0%
ATGCAGAGCAGCATGTTAAT+AGG - chr3.4:4529949-4529968 MS.gene51634:CDS 40.0%
GAAATTATGTGACCTACCGT+TGG + chr3.4:4528423-4528442 None:intergenic 40.0%
GAAGTTCAAAGACATGGCTA+GGG - chr3.4:4530115-4530134 MS.gene51634:CDS 40.0%
GAGCATCTTTCTATGGCAAA+GGG - chr3.4:4528999-4529018 MS.gene51634:CDS 40.0%
GAGTGGACACAGATTCTTAT+GGG - chr3.4:4529671-4529690 MS.gene51634:CDS 40.0%
GAGTTCGAAGTTCAAAGACA+TGG - chr3.4:4530109-4530128 MS.gene51634:CDS 40.0%
GGGATGCATTTGGAGAATTT+GGG - chr3.4:4530135-4530154 MS.gene51634:CDS 40.0%
GGTAGGTCACATAATTTCCA+TGG - chr3.4:4528425-4528444 MS.gene51634:CDS 40.0%
GTATCGTTCAAGGAAATGGT+TGG - chr3.4:4528870-4528889 MS.gene51634:CDS 40.0%
GTTCTCTCTATAAACCCACT+TGG + chr3.4:4529780-4529799 None:intergenic 40.0%
GTTTCGTTCCAAGATGTTCT+TGG + chr3.4:4529713-4529732 None:intergenic 40.0%
TACAACATCTCCCAATAAGC+AGG + chr3.4:4528972-4528991 None:intergenic 40.0%
TAGCCAACTTGGTTCAAACA+TGG - chr3.4:4530174-4530193 MS.gene51634:CDS 40.0%
TAGGGAAGATCCTGCTTATT+GGG - chr3.4:4528959-4528978 MS.gene51634:CDS 40.0%
TATGAATTGGAATCCGGTTG+CGG + chr3.4:4528646-4528665 None:intergenic 40.0%
TGAACTGACCTGATTGTTGA+GGG + chr3.4:4529151-4529170 None:intergenic 40.0%
TGAGCATCTTTCTATGGCAA+AGG - chr3.4:4528998-4529017 MS.gene51634:CDS 40.0%
TGATGTATGAGTCGATGGAT+GGG + chr3.4:4528539-4528558 None:intergenic 40.0%
TTCTATGGCAAAGGGAATTG+TGG - chr3.4:4529007-4529026 MS.gene51634:CDS 40.0%
TTGAGTGTTAGAGTGAGTGA+CGG + chr3.4:4528616-4528635 None:intergenic 40.0%
TTGATGTATGAGTCGATGGA+TGG + chr3.4:4528540-4528559 None:intergenic 40.0%
! GATTCTTATGGGTTGTGAAG+AGG - chr3.4:4529682-4529701 MS.gene51634:CDS 40.0%
! TATGTTTTGCACTTCTGCCA+TGG - chr3.4:4528743-4528762 MS.gene51634:CDS 40.0%
!! CAAGTTGGCTAATGCTTTTG+TGG + chr3.4:4530165-4530184 None:intergenic 40.0%
!! CACAAAAGCATTAGCCAACT+TGG - chr3.4:4530163-4530182 MS.gene51634:CDS 40.0%
!! GAGTTGATGGAATTTGAGAG+AGG - chr3.4:4530068-4530087 MS.gene51634:CDS 40.0%
AAAACACGCACCGTCTTCAA+CGG + chr3.4:4529072-4529091 None:intergenic 45.0%
AAATAGCTGAAGGGTTGGAG+AGG - chr3.4:4529649-4529668 MS.gene51634:CDS 45.0%
AAGTACACCACGCTTCTACT+CGG + chr3.4:4529585-4529604 None:intergenic 45.0%
AATGGCCCAATGCAGTAAAC+GGG + chr3.4:4529119-4529138 None:intergenic 45.0%
ATCACAATGCTTCTCACCAC+TGG - chr3.4:4528501-4528520 MS.gene51634:CDS 45.0%
ATGGAAGTTGCTTCCACCAT+GGG - chr3.4:4528762-4528781 MS.gene51634:CDS 45.0%
ATGTATCCATCACCAACGGT+AGG - chr3.4:4528408-4528427 MS.gene51634:CDS 45.0%
ATTCTCGCTGGCACAATTGA+AGG - chr3.4:4529626-4529645 MS.gene51634:CDS 45.0%
ATTGCTGACCCTCAACAATC+AGG - chr3.4:4529140-4529159 MS.gene51634:intron 45.0%
ATTGGAAGTTGTGGCGGTTA+AGG - chr3.4:4529046-4529065 MS.gene51634:intron 45.0%
CAATGGCCCAATGCAGTAAA+CGG + chr3.4:4529120-4529139 None:intergenic 45.0%
CCCGAAAATTCACAGCGAAA+CGG - chr3.4:4528845-4528864 MS.gene51634:CDS 45.0%
CGAAGTTCAAAGACATGGCT+AGG - chr3.4:4530114-4530133 MS.gene51634:CDS 45.0%
GAAGGAAATAGCTGAAGGGT+TGG - chr3.4:4529644-4529663 MS.gene51634:CDS 45.0%
GAGGGAAAGAGATAAGAGAG+AGG - chr3.4:4530087-4530106 MS.gene51634:CDS 45.0%
GGAGTGGACACAGATTCTTA+TGG - chr3.4:4529670-4529689 MS.gene51634:CDS 45.0%
GGATCTTCCCTATCAAGAAC+TGG + chr3.4:4528951-4528970 None:intergenic 45.0%
GGCAGTATCGTTCAAGGAAA+TGG - chr3.4:4528866-4528885 MS.gene51634:CDS 45.0%
GTGAACTGACCTGATTGTTG+AGG + chr3.4:4529152-4529171 None:intergenic 45.0%
GTTCCAAGATGTTCTTGGAG+TGG + chr3.4:4529708-4529727 None:intergenic 45.0%
TAAACAACCGAGTAGAAGCG+TGG - chr3.4:4529575-4529594 MS.gene51634:CDS 45.0%
TACAACAGGGGAGTTTGAGT+TGG - chr3.4:4529743-4529762 MS.gene51634:CDS 45.0%
TAGATTGCATGGCCTACACT+TGG + chr3.4:4529394-4529413 None:intergenic 45.0%
TCGTGAATTGGAAGTTGTGG+CGG - chr3.4:4529040-4529059 MS.gene51634:CDS 45.0%
TGCAATGGCCATGCAATCAT+TGG + chr3.4:4529930-4529949 None:intergenic 45.0%
TGGAGTTGAGATTGTGATGC+CGG - chr3.4:4528890-4528909 MS.gene51634:CDS 45.0%
TGTTGAGGGTCAGCAATCAA+TGG + chr3.4:4529137-4529156 None:intergenic 45.0%
TTGAGTGATCTGACGGAGTT+TGG + chr3.4:4528694-4528713 None:intergenic 45.0%
! ACAACAGGGGAGTTTGAGTT+GGG - chr3.4:4529744-4529763 MS.gene51634:CDS 45.0%
! AGCGTGGTGTACTTGTGTTT+TGG - chr3.4:4529591-4529610 MS.gene51634:CDS 45.0%
! CCGTTTCGCTGTGAATTTTC+GGG + chr3.4:4528848-4528867 None:intergenic 45.0%
! GCCGTTTCGCTGTGAATTTT+CGG + chr3.4:4528849-4528868 None:intergenic 45.0%
! TGGGTTCTGTTTTGCCAAGT+GGG - chr3.4:4529763-4529782 MS.gene51634:CDS 45.0%
! TGTGATGGTGAAGGACATGA+AGG - chr3.4:4529974-4529993 MS.gene51634:CDS 45.0%
! TTGGGTTCTGTTTTGCCAAG+TGG - chr3.4:4529762-4529781 MS.gene51634:CDS 45.0%
!! ACTCAGAACCTTGACTTGTG+GGG + chr3.4:4529835-4529854 None:intergenic 45.0%
!! AGCAGCACAAGAAGTGCTAT+AGG + chr3.4:4529438-4529457 None:intergenic 45.0%
!! AGTGGTGAGAAGCATTGTGA+TGG + chr3.4:4528502-4528521 None:intergenic 45.0%
!! GACTCAGAACCTTGACTTGT+GGG + chr3.4:4529836-4529855 None:intergenic 45.0%
!! GCTGTGAATTTTCGGGAAGT+AGG + chr3.4:4528841-4528860 None:intergenic 45.0%
!!! TACTTGTGTTTTGGAAGCCG+AGG - chr3.4:4529600-4529619 MS.gene51634:CDS 45.0%
AAGGGTGAGACGTTGAGATG+CGG + chr3.4:4528563-4528582 None:intergenic 50.0%
AAGTCACTGTGGCTGGAACT+CGG - chr3.4:4529878-4529897 MS.gene51634:CDS 50.0%
ACATGCTGCTCTGCATGCAA+TGG + chr3.4:4529945-4529964 None:intergenic 50.0%
ACTCAAAGCTTAGCCGCAAC+CGG - chr3.4:4528630-4528649 MS.gene51634:CDS 50.0%
AGGCCACTCCAAGAACATCT+TGG - chr3.4:4529702-4529721 MS.gene51634:CDS 50.0%
AGTGAGTGACGGTGACAGAA+GGG + chr3.4:4528605-4528624 None:intergenic 50.0%
CATGGAAGTTGCTTCCACCA+TGG - chr3.4:4528761-4528780 MS.gene51634:CDS 50.0%
CGAAACGGCAGTATCGTTCA+AGG - chr3.4:4528860-4528879 MS.gene51634:CDS 50.0%
CGGAGGTTTGAGTGATCTGA+CGG + chr3.4:4528701-4528720 None:intergenic 50.0%
CTCCTCCCGTTTACTGCATT+GGG - chr3.4:4529111-4529130 MS.gene51634:intron 50.0%
CTGGTGTGCCAATGATTGCA+TGG - chr3.4:4529919-4529938 MS.gene51634:CDS 50.0%
GAAGAGGGTGAGAGAGTTGA+TGG - chr3.4:4530055-4530074 MS.gene51634:CDS 50.0%
GACATGGCTAGGGATGCATT+TGG - chr3.4:4530125-4530144 MS.gene51634:CDS 50.0%
GAGTTGAGATTGTGATGCCG+GGG - chr3.4:4528892-4528911 MS.gene51634:CDS 50.0%
GATGGTGAAGGACATGAAGG+TGG - chr3.4:4529977-4529996 MS.gene51634:CDS 50.0%
GGAGTTGAGATTGTGATGCC+GGG - chr3.4:4528891-4528910 MS.gene51634:CDS 50.0%
GGCATCAACGCTGCATTCAA+CGG + chr3.4:4528924-4528943 None:intergenic 50.0%
GTAAACAGGGATTCCCATGG+TGG + chr3.4:4528778-4528797 None:intergenic 50.0%
TCCCTATCAAGAACTGGTCC+CGG + chr3.4:4528945-4528964 None:intergenic 50.0%
TGACGGTGACAGAAGGGAAA+CGG + chr3.4:4528599-4528618 None:intergenic 50.0%
TGTATGAGTCGATGGATGGG+TGG + chr3.4:4528536-4528555 None:intergenic 50.0%
! ATGTGACCTACCGTTGGTGA+TGG + chr3.4:4528417-4528436 None:intergenic 50.0%
! CATGGTGGAAGCAACTTCCA+TGG + chr3.4:4528763-4528782 None:intergenic 50.0%
! CGACTCAGAACCTTGACTTG+TGG + chr3.4:4529837-4529856 None:intergenic 50.0%
! GATAGTCGCTGGCTAGTACA+AGG + chr3.4:4529248-4529267 None:intergenic 50.0%
! GCGGTTGATGTATGAGTCGA+TGG + chr3.4:4528544-4528563 None:intergenic 50.0%
! GGAGGACTTCGTTTGAGATC+CGG + chr3.4:4529095-4529114 None:intergenic 50.0%
! TGAAGACGGTGCGTGTTTTC+CGG - chr3.4:4529073-4529092 MS.gene51634:intron 50.0%
!! CAAGGTTCTGAGTCGCGAAT+CGG - chr3.4:4529842-4529861 MS.gene51634:CDS 50.0%
!! GTTGAATGCAGCGTTGATGC+CGG - chr3.4:4528923-4528942 MS.gene51634:CDS 50.0%
!! TTGAATGCAGCGTTGATGCC+GGG - chr3.4:4528924-4528943 MS.gene51634:CDS 50.0%
!!! CACTTCTGGAGCTGCTGTTT+TGG - chr3.4:4528806-4528825 MS.gene51634:CDS 50.0%
AAGCCGAGGATCATTCTCGC+TGG - chr3.4:4529614-4529633 MS.gene51634:CDS 55.0%
CCAATGCAGTAAACGGGAGG+AGG + chr3.4:4529113-4529132 None:intergenic 55.0%
CCTCCTCCCGTTTACTGCAT+TGG - chr3.4:4529110-4529129 MS.gene51634:intron 55.0%
CCTCTTCTCCACTTCCTCTC+CGG + chr3.4:4530042-4530061 None:intergenic 55.0%
CGGAGAGGAAGTGGAGAAGA+GGG - chr3.4:4530040-4530059 MS.gene51634:CDS 55.0%
GACAGAAGGGAAACGGTGGA+AGG + chr3.4:4528592-4528611 None:intergenic 55.0%
GAGTGAGTGACGGTGACAGA+AGG + chr3.4:4528606-4528625 None:intergenic 55.0%
GCCGGGACCAGTTCTTGATA+GGG - chr3.4:4528941-4528960 MS.gene51634:CDS 55.0%
GCGGTTAAGGCCGTTGAAGA+CGG - chr3.4:4529059-4529078 MS.gene51634:intron 55.0%
GGACATGAAGGTGGCTGTTG+CGG - chr3.4:4529986-4530005 MS.gene51634:CDS 55.0%
GGTTTGCAAGTCACTGTGGC+TGG - chr3.4:4529871-4529890 MS.gene51634:CDS 55.0%
GTGCCAGCGAGAATGATCCT+CGG + chr3.4:4529620-4529639 None:intergenic 55.0%
GTGTTGGAAGGAGTGGTTGC+TGG - chr3.4:4529900-4529919 MS.gene51634:CDS 55.0%
GTTTGTGACCGGAGAGGAAG+TGG - chr3.4:4530031-4530050 MS.gene51634:CDS 55.0%
TGAGTCGCGAATCGGTTGGT+GGG - chr3.4:4529850-4529869 MS.gene51634:CDS 55.0%
TGCCGGGACCAGTTCTTGAT+AGG - chr3.4:4528940-4528959 MS.gene51634:CDS 55.0%
TGGAGCAAAGGGAAGGCGAT+GGG - chr3.4:4530009-4530028 MS.gene51634:CDS 55.0%
! GAAGGCGATGGGTTTGTGAC+CGG - chr3.4:4530020-4530039 MS.gene51634:CDS 55.0%
! GGTGGGTTTGCAAGTCACTG+TGG - chr3.4:4529867-4529886 MS.gene51634:CDS 55.0%
! GTTCTGAGTCGCGAATCGGT+TGG - chr3.4:4529846-4529865 MS.gene51634:CDS 55.0%
!! GAACTCGGTGTTGGAAGGAG+TGG - chr3.4:4529893-4529912 MS.gene51634:CDS 55.0%
AACCAAAGAGAGGGGCCTGG+TGG - chr3.4:4529797-4529816 MS.gene51634:CDS 60.0%
AGTCGATGGATGGGTGGTCG+AGG + chr3.4:4528530-4528549 None:intergenic 60.0%
CATGAAGGTGGCTGTTGCGG+TGG - chr3.4:4529989-4530008 MS.gene51634:CDS 60.0%
CCGGAGAGGAAGTGGAGAAG+AGG - chr3.4:4530039-4530058 MS.gene51634:CDS 60.0%
CGGTGACAGAAGGGAAACGG+TGG + chr3.4:4528596-4528615 None:intergenic 60.0%
CTGAGTCGCGAATCGGTTGG+TGG - chr3.4:4529849-4529868 MS.gene51634:CDS 60.0%
GAGAACCAAAGAGAGGGGCC+TGG - chr3.4:4529794-4529813 MS.gene51634:CDS 60.0%
GCATTCAACGGCGCATTCCC+CGG + chr3.4:4528912-4528931 None:intergenic 60.0%
GCTGAAGGGTTGGAGAGGAG+TGG - chr3.4:4529654-4529673 MS.gene51634:CDS 60.0%
GGCCCAATGCAGTAAACGGG+AGG + chr3.4:4529116-4529135 None:intergenic 60.0%
GGCTGTTGCGGTGGAGCAAA+GGG - chr3.4:4529998-4530017 MS.gene51634:CDS 60.0%
GTGGAGCAAAGGGAAGGCGA+TGG - chr3.4:4530008-4530027 MS.gene51634:CDS 60.0%
GTTGCGGTGGAGCAAAGGGA+AGG - chr3.4:4530002-4530021 MS.gene51634:CDS 60.0%
TGGCTGTTGCGGTGGAGCAA+AGG - chr3.4:4529997-4530016 MS.gene51634:CDS 60.0%
! CGATGGGTTTGTGACCGGAG+AGG - chr3.4:4530025-4530044 MS.gene51634:CDS 60.0%
!! CTGTGGCTGGAACTCGGTGT+TGG - chr3.4:4529884-4529903 MS.gene51634:CDS 60.0%
!! GGCTGGAACTCGGTGTTGGA+AGG - chr3.4:4529888-4529907 MS.gene51634:CDS 60.0%
CACCACCAGGCCCCTCTCTT+TGG + chr3.4:4529802-4529821 None:intergenic 65.0%
CTCGTGGGCCCCACAAGTCA+AGG - chr3.4:4529824-4529843 MS.gene51634:CDS 65.0%
TGGGTGGTCGAGGAAGCCAG+TGG + chr3.4:4528520-4528539 None:intergenic 65.0%
! GGGCCTGGTGGTGAACTCGT+GGG - chr3.4:4529809-4529828 MS.gene51634:CDS 65.0%
GGGCCCACGAGTTCACCACC+AGG + chr3.4:4529815-4529834 None:intergenic 70.0%
! GGGGCCTGGTGGTGAACTCG+TGG - chr3.4:4529808-4529827 MS.gene51634:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 4528387 4530208 4528387 ID=MS.gene51634
chr3.4 mRNA 4528387 4530208 4528387 ID=MS.gene51634.t1;Parent=MS.gene51634
chr3.4 exon 4529434 4530208 4529434 ID=MS.gene51634.t1.exon1;Parent=MS.gene51634.t1
chr3.4 CDS 4529434 4530208 4529434 ID=cds.MS.gene51634.t1;Parent=MS.gene51634.t1
chr3.4 exon 4528387 4529060 4528387 ID=MS.gene51634.t1.exon2;Parent=MS.gene51634.t1
chr3.4 CDS 4528387 4529060 4528387 ID=cds.MS.gene51634.t1;Parent=MS.gene51634.t1
Gene Sequence

>MS.gene51634

ATGGTAAAAACAACAATAGTGATGTATCCATCACCAACGGTAGGTCACATAATTTCCATGGTAGAATTAGCCAAACTTCTCAGTCATCATCATCAACAAGAACAAGACTTCTCCATCACAATGCTTCTCACCACTGGCTTCCTCGACCACCCATCCATCGACTCATACATCAACCGCATCTCAACGTCTCACCCTTTAATTTCCTTCCACCGTTTCCCTTCTGTCACCGTCACTCACTCTAACACTCAAAGCTTAGCCGCAACCGGATTCCAATTCATAAAAAGAAACGTTGTCAACGTTGAATCCAAACTCCGTCAGATCACTCAAACCTCCGTTATCAAATCCTTCATTATCGATATGTTTTGCACTTCTGCCATGGAAGTTGCTTCCACCATGGGAATCCCTGTTTACTATTTCTTCACTTCTGGAGCTGCTGTTTTGGCACTGTGTTCCTACTTCCCGAAAATTCACAGCGAAACGGCAGTATCGTTCAAGGAAATGGTTGGAGTTGAGATTGTGATGCCGGGGAATGCGCCGTTGAATGCAGCGTTGATGCCGGGACCAGTTCTTGATAGGGAAGATCCTGCTTATTGGGAGATGTTGTATTTCTGTGAGCATCTTTCTATGGCAAAGGGAATTGTGGTGAATACATTTCGTGAATTGGAAGTTGTGGCGGTTAAGGCCGTTGAAGACGGTGCGTGTTTTCCGGATCTCAAACGAAGTCCTCCTCCCGTTTACTGCATTGGGCCATTGATTGCTGACCCTCAACAATCAGGTCAGTTCACTTTACTGCTTCTTTTGTATTTTTTATGAAGCGAAATAAGTGGTCTTATGGTAAAATTAGGACACAAGTTTTAACCTTGTACTAGCCAGCGACTATCATTTGTAAGTTCTTGCAAGAGTTTTGATTTCTTGTAAAAATGACTTATTAGAAGTACATTCATAACCAATTTAATTTCTTTTCCTATGAATCAGCTGGTATAGAAAAAGAAGTACATTCATAACCAAGTGTAGGCCATGCAATCTATTTGTATGTCTGTAATTTAAACCTATAGCACTTCTTGTGCTGCTCGTGTTATTCTTTATCGTTATAATGAAGTTATTTTGCCGATAAAAAATGAAGCATTGATTGTTTGAATGAAAATCAGATGAAGCAAGCGACAGCAAAGATTGCTTGTCATGGCTAGATAAACAACCGAGTAGAAGCGTGGTGTACTTGTGTTTTGGAAGCCGAGGATCATTCTCGCTGGCACAATTGAAGGAAATAGCTGAAGGGTTGGAGAGGAGTGGACACAGATTCTTATGGGTTGTGAAGAGGCCACTCCAAGAACATCTTGGAACGAAACAAGTTCACGATACAACAGGGGAGTTTGAGTTGGGTTCTGTTTTGCCAAGTGGGTTTATAGAGAGAACCAAAGAGAGGGGCCTGGTGGTGAACTCGTGGGCCCCACAAGTCAAGGTTCTGAGTCGCGAATCGGTTGGTGGGTTTGCAAGTCACTGTGGCTGGAACTCGGTGTTGGAAGGAGTGGTTGCTGGTGTGCCAATGATTGCATGGCCATTGCATGCAGAGCAGCATGTTAATAGGAATGTGATGGTGAAGGACATGAAGGTGGCTGTTGCGGTGGAGCAAAGGGAAGGCGATGGGTTTGTGACCGGAGAGGAAGTGGAGAAGAGGGTGAGAGAGTTGATGGAATTTGAGAGAGGGAAAGAGATAAGAGAGAGGAGTTCGAAGTTCAAAGACATGGCTAGGGATGCATTTGGAGAATTTGGGTCATCCACAAAAGCATTAGCCAACTTGGTTCAAACATGGAATGATAACTAG

Protein sequence

>MS.gene51634.t1

MVKTTIVMYPSPTVGHIISMVELAKLLSHHHQQEQDFSITMLLTTGFLDHPSIDSYINRISTSHPLISFHRFPSVTVTHSNTQSLAATGFQFIKRNVVNVESKLRQITQTSVIKSFIIDMFCTSAMEVASTMGIPVYYFFTSGAAVLALCSYFPKIHSETAVSFKEMVGVEIVMPGNAPLNAALMPGPVLDREDPAYWEMLYFCEHLSMAKGIVVNTFRELEVVAVKAVEDGACFPDLKRSPPPVYCIGPLIADPQQSDEASDSKDCLSWLDKQPSRSVVYLCFGSRGSFSLAQLKEIAEGLERSGHRFLWVVKRPLQEHLGTKQVHDTTGEFELGSVLPSGFIERTKERGLVVNSWAPQVKVLSRESVGGFASHCGWNSVLEGVVAGVPMIAWPLHAEQHVNRNVMVKDMKVAVAVEQREGDGFVTGEEVEKRVRELMEFERGKEIRERSSKFKDMARDAFGEFGSSTKALANLVQTWNDN