Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52177.t1 | XP_003623847.1 | 93.5 | 613 | 19 | 2 | 1 | 593 | 1 | 612 | 0.00E+00 | 1116.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52177.t1 | Q9LPD2 | 53.4 | 567 | 232 | 7 | 1 | 546 | 1 | 556 | 2.6e-165 | 583.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52177.t1 | A2Q3P8 | 93.5 | 613 | 19 | 2 | 1 | 593 | 1 | 612 | 0.0e+00 | 1116.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056169 | MS.gene52177 | 0.805917 | 1.06E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52177.t1 | MTR_7g076290 | 94.127 | 613 | 15 | 2 | 1 | 593 | 1 | 612 | 0.0 | 1182 |
| MS.gene52177.t1 | MTR_6g055360 | 36.220 | 254 | 153 | 6 | 1 | 249 | 1 | 250 | 8.27e-34 | 136 |
| MS.gene52177.t1 | MTR_7g034405 | 45.161 | 124 | 66 | 2 | 117 | 240 | 1026 | 1147 | 1.39e-21 | 100 |
| MS.gene52177.t1 | MTR_1g085130 | 31.095 | 283 | 160 | 15 | 1 | 257 | 1 | 274 | 1.09e-16 | 82.8 |
| MS.gene52177.t1 | MTR_1g085130 | 33.790 | 219 | 125 | 10 | 51 | 257 | 49 | 259 | 1.11e-16 | 82.4 |
| MS.gene52177.t1 | MTR_1g085130 | 31.250 | 288 | 163 | 15 | 1 | 262 | 1 | 279 | 1.28e-16 | 82.4 |
| MS.gene52177.t1 | MTR_1g085130 | 31.250 | 288 | 163 | 15 | 1 | 262 | 1 | 279 | 1.83e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52177.t1 | AT1G01880 | 52.529 | 613 | 255 | 8 | 1 | 592 | 1 | 598 | 0.0 | 610 |
| MS.gene52177.t1 | AT1G01880 | 52.529 | 613 | 255 | 8 | 1 | 592 | 1 | 598 | 0.0 | 610 |
| MS.gene52177.t1 | AT1G01880 | 52.365 | 613 | 255 | 9 | 1 | 592 | 1 | 597 | 0.0 | 603 |
| MS.gene52177.t1 | AT1G01880 | 49.180 | 549 | 243 | 8 | 65 | 592 | 7 | 540 | 1.17e-170 | 496 |
| MS.gene52177.t1 | AT3G48900 | 35.294 | 255 | 150 | 7 | 1 | 247 | 1 | 248 | 2.16e-31 | 129 |
| MS.gene52177.t1 | AT3G28030 | 39.264 | 163 | 97 | 2 | 83 | 245 | 697 | 857 | 5.52e-23 | 104 |
| MS.gene52177.t1 | AT3G28030 | 39.264 | 163 | 97 | 2 | 83 | 245 | 915 | 1075 | 5.95e-23 | 104 |
| MS.gene52177.t1 | AT3G28030 | 39.264 | 163 | 97 | 2 | 83 | 245 | 889 | 1049 | 6.23e-23 | 104 |
| MS.gene52177.t1 | AT3G28030 | 39.264 | 163 | 97 | 2 | 83 | 245 | 889 | 1049 | 6.62e-23 | 104 |
| MS.gene52177.t1 | AT3G48900 | 39.726 | 146 | 87 | 1 | 102 | 247 | 40 | 184 | 2.31e-21 | 98.6 |
| MS.gene52177.t1 | AT3G48900 | 39.726 | 146 | 87 | 1 | 102 | 247 | 40 | 184 | 2.41e-21 | 98.2 |
| MS.gene52177.t1 | AT5G26680 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 8.26e-18 | 86.3 |
| MS.gene52177.t1 | AT5G26680 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 2.37e-17 | 85.5 |
| MS.gene52177.t1 | AT5G26680 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 2.57e-17 | 85.1 |
| MS.gene52177.t1 | AT5G26680 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 2.57e-17 | 85.1 |
| MS.gene52177.t1 | AT5G26680 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 2.57e-17 | 85.1 |
Find 126 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGACCTTCACTATTTAAT+TGG | 0.053466 | 7.4:-29220602 | None:intergenic |
| ATTTCATCCTTTGGAAAATT+TGG | 0.099249 | 7.4:-29222309 | None:intergenic |
| GACAGTGATGCATTCCTCTT+TGG | 0.175216 | 7.4:+29220645 | MS.gene52177:CDS |
| CCAACCGATAGTTTGCTATT+TGG | 0.175622 | 7.4:+29222651 | MS.gene52177:CDS |
| AGGCGACGCCTAACAGATTT+TGG | 0.191704 | 7.4:-29223441 | None:intergenic |
| TGGGTGTTGGTGGTAATTTC+TGG | 0.201430 | 7.4:+29218900 | MS.gene52177:CDS |
| GATGACTCTTCTCCATGTTT+TGG | 0.212072 | 7.4:-29223345 | None:intergenic |
| TTTGTAGTTTGGAGCGTTTC+CGG | 0.219279 | 7.4:+29220096 | MS.gene52177:intron |
| CCTAATAGCTATCTCTCTTT+TGG | 0.274761 | 7.4:+29221416 | MS.gene52177:CDS |
| ATCCATCTTCTTCACAAATC+TGG | 0.278684 | 7.4:-29222863 | None:intergenic |
| CAACCGATAGTTTGCTATTT+GGG | 0.292855 | 7.4:+29222652 | MS.gene52177:CDS |
| CATTAAAGCTGAGGAAAATA+TGG | 0.298254 | 7.4:+29221867 | MS.gene52177:CDS |
| TTGCTATTGATTTATCGTTT+TGG | 0.299838 | 7.4:+29218981 | MS.gene52177:CDS |
| ACAGTGATGCATTCCTCTTT+GGG | 0.302361 | 7.4:+29220646 | MS.gene52177:CDS |
| GGACTTGACGATTTCCTCTT+TGG | 0.304845 | 7.4:-29223411 | None:intergenic |
| CTCATGGGAAAGACCGAATA+TGG | 0.314813 | 7.4:+29222518 | MS.gene52177:CDS |
| ACGGTCACTTACTTTGGAAT+TGG | 0.315064 | 7.4:-29220697 | None:intergenic |
| CTGCTCATTCTGTGGGCATC+CGG | 0.316217 | 7.4:+29221927 | MS.gene52177:CDS |
| AAAACCTTCATTGCGTGAAT+AGG | 0.329105 | 7.4:-29218936 | None:intergenic |
| TTTCCGGTGTTCGTTGTTGA+TGG | 0.330529 | 7.4:+29220112 | MS.gene52177:CDS |
| TGCATGCCAGATTTATTTGC+CGG | 0.335933 | 7.4:-29222777 | None:intergenic |
| ATGAAAATATGGACCTTGTT+GGG | 0.338687 | 7.4:+29222904 | MS.gene52177:CDS |
| AAACCTTCATTGCGTGAATA+GGG | 0.344866 | 7.4:-29218935 | None:intergenic |
| TCTGTTGACAGATGAAAATA+TGG | 0.352773 | 7.4:+29222893 | MS.gene52177:CDS |
| CAAGCTAGTCGACTCAATTC+CGG | 0.360228 | 7.4:-29220188 | None:intergenic |
| AGAACTCTGTAATATTTAAC+TGG | 0.360267 | 7.4:-29223296 | None:intergenic |
| CCAAAAGAGAGATAGCTATT+AGG | 0.366111 | 7.4:-29221416 | None:intergenic |
| ATATCAATGATTTCATCCTT+TGG | 0.375355 | 7.4:-29222318 | None:intergenic |
| CGGTCACTTACTTTGGAATT+GGG | 0.384232 | 7.4:-29220696 | None:intergenic |
| GGGTGTTGGTGGTAATTTCT+GGG | 0.384908 | 7.4:+29218901 | MS.gene52177:CDS |
| AATTGAGTCGACTAGCTTGC+CGG | 0.386864 | 7.4:+29220192 | MS.gene52177:CDS |
| ATGACCTTCACTATTTAATT+GGG | 0.390559 | 7.4:-29220601 | None:intergenic |
| CTGAGGTGAGGTTTCTTGAC+AGG | 0.400391 | 7.4:-29219034 | None:intergenic |
| AAAACTCCGGCAAATAAATC+TGG | 0.403594 | 7.4:+29222771 | MS.gene52177:CDS |
| AAGACCGAATATGGACCTTC+TGG | 0.404898 | 7.4:+29222527 | MS.gene52177:CDS |
| GTGAAGATGATATATTGAAT+AGG | 0.410092 | 7.4:+29221514 | MS.gene52177:CDS |
| AAGAAGATGGTTGACATCAT+AGG | 0.410471 | 7.4:-29222609 | None:intergenic |
| TCAGATATTGAAGCTGGGCT+TGG | 0.410473 | 7.4:+29221378 | MS.gene52177:CDS |
| TCCATCTTCTTCACAAATCT+GGG | 0.412006 | 7.4:-29222862 | None:intergenic |
| TTTAAATTTGCAGGAATTGA+AGG | 0.414875 | 7.4:+29223194 | MS.gene52177:intron |
| AACCATCTTCTTGAGAGAAA+TGG | 0.422847 | 7.4:+29222620 | MS.gene52177:CDS |
| GAAAAGGTTCCGGCAGGAAC+AGG | 0.426754 | 7.4:+29222947 | MS.gene52177:CDS |
| TAGGAACTTGCTAAGCTACT+TGG | 0.427518 | 7.4:+29220534 | MS.gene52177:intron |
| TCCTCAGCTTTAATGTCAAT+AGG | 0.430541 | 7.4:-29221859 | None:intergenic |
| CAGAAGAAGTGAAAAGGTTC+CGG | 0.431380 | 7.4:+29222937 | MS.gene52177:CDS |
| CTAATATTCCAAAATCTGTT+AGG | 0.432669 | 7.4:+29223433 | MS.gene52177:CDS |
| CCCCAGATTTGTGAAGAAGA+TGG | 0.435198 | 7.4:+29222861 | MS.gene52177:CDS |
| TACGATTTGAGTGGTGTTCA+AGG | 0.445818 | 7.4:+29221450 | MS.gene52177:CDS |
| TCAACCAGAAGGTCCATATT+CGG | 0.445944 | 7.4:-29222531 | None:intergenic |
| GATGAAAATATGGACCTTGT+TGG | 0.449635 | 7.4:+29222903 | MS.gene52177:CDS |
| TGATTGCAATTCTTGTTGTA+TGG | 0.451072 | 7.4:+29222041 | MS.gene52177:CDS |
| CAATCACATTTAAAACCCTC+TGG | 0.451761 | 7.4:-29222024 | None:intergenic |
| GCTGAAGAAGGTGTTTCAGC+TGG | 0.452391 | 7.4:+29220217 | MS.gene52177:CDS |
| TTCCGGTGTTCGTTGTTGAT+GGG | 0.454954 | 7.4:+29220113 | MS.gene52177:CDS |
| AATATGTCAGATATTGAAGC+TGG | 0.465572 | 7.4:+29221372 | MS.gene52177:CDS |
| AGCCATTTCTCTCAAGAAGA+TGG | 0.471480 | 7.4:-29222622 | None:intergenic |
| ACTTTGTTTGCAGTGAATGA+TGG | 0.475062 | 7.4:+29222486 | MS.gene52177:intron |
| GTCAAGTGGAAACGTGCAAT+GGG | 0.475276 | 7.4:+29222735 | MS.gene52177:CDS |
| TGCTCATTCTGTGGGCATCC+GGG | 0.483415 | 7.4:+29221928 | MS.gene52177:CDS |
| GACATATTGTAGCATTCAAA+CGG | 0.484489 | 7.4:-29221357 | None:intergenic |
| TCTCCTTTAGCCTTCAGTAC+AGG | 0.490882 | 7.4:-29220561 | None:intergenic |
| CACACTACTAGTCAAACAAA+AGG | 0.494721 | 7.4:-29223461 | None:intergenic |
| AAGCCCTATTCACGCAATGA+AGG | 0.496872 | 7.4:+29218932 | MS.gene52177:CDS |
| GCCTGTGATTTCAACGGAGA+TGG | 0.497761 | 7.4:-29220139 | None:intergenic |
| CAATGCAGATTACATGAGAT+AGG | 0.498331 | 7.4:+29221814 | MS.gene52177:intron |
| AAGAGGAATGCATCACTGTC+AGG | 0.499239 | 7.4:-29220642 | None:intergenic |
| CTCCGTTGAAATCACAGGCC+AGG | 0.502105 | 7.4:+29220143 | MS.gene52177:CDS |
| GACGATTAATCTCTTCTCAA+AGG | 0.504394 | 7.4:+29219072 | MS.gene52177:CDS |
| GAGGAAAATATGGATATTGA+CGG | 0.504501 | 7.4:+29221877 | MS.gene52177:CDS |
| AGGAACTTGCTAAGCTACTT+GGG | 0.506203 | 7.4:+29220535 | MS.gene52177:intron |
| ACTGGGATCCGTCATACATT+CGG | 0.507228 | 7.4:+29222574 | MS.gene52177:CDS |
| AATTCAATCATGGGTGTTGG+TGG | 0.511542 | 7.4:+29218890 | None:intergenic |
| TGAGGTGAGGTTTCTTGACA+GGG | 0.512535 | 7.4:-29219033 | None:intergenic |
| AGCTTGCCGGTTGCTGAAGA+AGG | 0.515821 | 7.4:+29220205 | MS.gene52177:CDS |
| ATTAATTCAATCATGGGTGT+TGG | 0.517628 | 7.4:+29218887 | None:intergenic |
| AAATATTGCCTCTAAAACTC+CGG | 0.521848 | 7.4:+29222758 | MS.gene52177:CDS |
| TGTGTCGCGGATGGCAATGA+AGG | 0.522660 | 7.4:+29221988 | MS.gene52177:CDS |
| ATGACGGATCCCAGTTCTGA+TGG | 0.524536 | 7.4:-29222566 | None:intergenic |
| TCAACATCACCAAACTCAAA+AGG | 0.525832 | 7.4:+29223270 | MS.gene52177:CDS |
| ATGATGGACCTCAGATCTCA+TGG | 0.526994 | 7.4:+29222502 | MS.gene52177:CDS |
| GAAACACCTTCTTCAGCAAC+CGG | 0.528035 | 7.4:-29220211 | None:intergenic |
| CAAACTCACTGCTCATTCTG+TGG | 0.528123 | 7.4:+29221919 | MS.gene52177:CDS |
| TCGACTCAATTCCGGAAGAC+CGG | 0.531944 | 7.4:-29220180 | None:intergenic |
| TTGAGTGGTGTTCAAGGGAT+CGG | 0.533209 | 7.4:+29221456 | MS.gene52177:CDS |
| TCCTATTGACATTAAAGCTG+AGG | 0.538234 | 7.4:+29221858 | MS.gene52177:CDS |
| CTGAAGAAGGTGTTTCAGCT+GGG | 0.541185 | 7.4:+29220218 | MS.gene52177:CDS |
| CTTACGCAGAAGAAGTGAAA+AGG | 0.545988 | 7.4:+29222931 | MS.gene52177:CDS |
| TGTCAAGTGGAAACGTGCAA+TGG | 0.549796 | 7.4:+29222734 | MS.gene52177:CDS |
| AAACGTGTGAAGACGAGATA+CGG | 0.554447 | 7.4:+29222696 | MS.gene52177:CDS |
| TAATGCATTTAGCCCCAAAG+AGG | 0.555621 | 7.4:-29220659 | None:intergenic |
| TTTAAACTTCCATCAGAACT+GGG | 0.555624 | 7.4:+29222557 | MS.gene52177:CDS |
| CAGTGATGCATTCCTCTTTG+GGG | 0.562537 | 7.4:+29220647 | MS.gene52177:CDS |
| TCCATCTCCGTTGAAATCAC+AGG | 0.563135 | 7.4:+29220138 | MS.gene52177:CDS |
| ATTCCTGTACTGAAGGCTAA+AGG | 0.568014 | 7.4:+29220558 | MS.gene52177:CDS |
| TAATAAATACCTGTTCCTGC+CGG | 0.568278 | 7.4:-29222956 | None:intergenic |
| AGGAAAATATGGATATTGAC+GGG | 0.569377 | 7.4:+29221878 | MS.gene52177:CDS |
| AAACTCACTGCTCATTCTGT+GGG | 0.570395 | 7.4:+29221920 | MS.gene52177:CDS |
| ACGATTTGAGTGGTGTTCAA+GGG | 0.573182 | 7.4:+29221451 | MS.gene52177:CDS |
| AGAAGTGAAAAGGTTCCGGC+AGG | 0.576018 | 7.4:+29222941 | MS.gene52177:CDS |
| CTGCCCAAATAGCAAACTAT+CGG | 0.576488 | 7.4:-29222655 | None:intergenic |
| AGATTACATGAGATAGGCAA+AGG | 0.579994 | 7.4:+29221820 | MS.gene52177:intron |
| GATTACATGAGATAGGCAAA+GGG | 0.589882 | 7.4:+29221821 | MS.gene52177:intron |
| ACTTGGGATTCCTGTACTGA+AGG | 0.589944 | 7.4:+29220551 | MS.gene52177:CDS |
| ATAATCCGCCGAATGTATGA+CGG | 0.593450 | 7.4:-29222582 | None:intergenic |
| CTGCGTAAGCAGCCCCAACA+AGG | 0.593557 | 7.4:-29222917 | None:intergenic |
| TGAAAATATGGACCTTGTTG+GGG | 0.600292 | 7.4:+29222905 | MS.gene52177:CDS |
| GTCCCATCAACAACGAACAC+CGG | 0.600640 | 7.4:-29220115 | None:intergenic |
| CCAAATAGCAAACTATCGGT+TGG | 0.605787 | 7.4:-29222651 | None:intergenic |
| GGTCTTTCCCATGAGATCTG+AGG | 0.617897 | 7.4:-29222510 | None:intergenic |
| ATATGTCAGATATTGAAGCT+GGG | 0.620721 | 7.4:+29221373 | MS.gene52177:CDS |
| GGAAATGATTACGATTTGAG+TGG | 0.621724 | 7.4:+29221441 | MS.gene52177:CDS |
| TGTGCCCAATTAAATAGTGA+AGG | 0.623153 | 7.4:+29220597 | MS.gene52177:CDS |
| AGTAAACAAAATCCAAAACA+TGG | 0.628201 | 7.4:+29223333 | MS.gene52177:CDS |
| GAGGTGAGGTTTCTTGACAG+GGG | 0.631952 | 7.4:-29219032 | None:intergenic |
| TGATGGACCTCAGATCTCAT+GGG | 0.634706 | 7.4:+29222503 | MS.gene52177:CDS |
| AAGCTGGGCTTGGATTGAAG+AGG | 0.636947 | 7.4:+29221388 | MS.gene52177:CDS |
| CCATCTTCTTCACAAATCTG+GGG | 0.640984 | 7.4:-29222861 | None:intergenic |
| AATGACAGCCAAGACAGTGG+AGG | 0.663678 | 7.4:+29223381 | MS.gene52177:CDS |
| AAGAAGGTGTTTCAGCTGGG+AGG | 0.668107 | 7.4:+29220221 | MS.gene52177:CDS |
| AAGATGTGTTCAAGAGTGTG+TGG | 0.672457 | 7.4:+29220258 | MS.gene52177:CDS |
| GTGGAGGCTCAAAACCAAAG+AGG | 0.681076 | 7.4:+29223397 | MS.gene52177:CDS |
| GGGATCCGTCATACATTCGG+CGG | 0.686308 | 7.4:+29222577 | MS.gene52177:CDS |
| ATCCTGGCCTGTGATTTCAA+CGG | 0.687854 | 7.4:-29220145 | None:intergenic |
| GCATGATGTTGATGAAACAG+TGG | 0.705087 | 7.4:+29222815 | MS.gene52177:CDS |
| ATGTATCTATGCAATGACAA+TGG | 0.712623 | 7.4:+29222339 | MS.gene52177:CDS |
| AATCTGTGACAAGATTGCAA+AGG | 0.722574 | 7.4:+29222284 | MS.gene52177:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTTTACTATATTTT+TGG | + | chr7.4:29222143-29222162 | MS.gene52177:intron | 10.0% |
| !!! | ATTTTTATTTTTTTGTAGTT+TGG | + | chr7.4:29220085-29220104 | MS.gene52177:intron | 10.0% |
| !!! | ATTTTTTTAGTATTTTTCAA+AGG | + | chr7.4:29222192-29222211 | MS.gene52177:intron | 10.0% |
| !!! | TTTTTCTAATATAATCAAAA+GGG | - | chr7.4:29219171-29219190 | None:intergenic | 10.0% |
| !!! | TTTTTTCTAATATAATCAAA+AGG | - | chr7.4:29219172-29219191 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTTATAATCAAAA+GGG | - | chr7.4:29219362-29219381 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTATAATCAAA+AGG | - | chr7.4:29219363-29219382 | None:intergenic | 10.0% |
| !! | AAAAAATTTAAGTGATTGTT+TGG | + | chr7.4:29219186-29219205 | MS.gene52177:intron | 15.0% |
| !! | AAAATAATTAACCATTTAAG+GGG | - | chr7.4:29223103-29223122 | None:intergenic | 15.0% |
| !! | AATCAGAGTTTATATTATAA+TGG | - | chr7.4:29220762-29220781 | None:intergenic | 15.0% |
| !! | CAAAATAATTAACCATTTAA+GGG | - | chr7.4:29223104-29223123 | None:intergenic | 15.0% |
| !! | CTATTAATCTAAATTTAACA+TGG | - | chr7.4:29221175-29221194 | None:intergenic | 15.0% |
| !! | TATAAATGATTTAAATTTGC+AGG | + | chr7.4:29223185-29223204 | MS.gene52177:intron | 15.0% |
| !! | TCAAAATAATTAACCATTTA+AGG | - | chr7.4:29223105-29223124 | None:intergenic | 15.0% |
| !! | TTATAATATAAACTCTGATT+TGG | + | chr7.4:29220762-29220781 | MS.gene52177:intron | 15.0% |
| !!! | ATAAAAAATTAGAGTTTGTT+TGG | + | chr7.4:29219526-29219545 | MS.gene52177:intron | 15.0% |
| !!! | TCAATTTTTCTCTTTTAAAA+GGG | - | chr7.4:29219696-29219715 | None:intergenic | 15.0% |
| !! | AAAAAAATTGAGAGATTGTT+TGG | + | chr7.4:29219376-29219395 | MS.gene52177:intron | 20.0% |
| !! | AAATCATTTATATCTCAACA+CGG | - | chr7.4:29223177-29223196 | None:intergenic | 20.0% |
| !! | AACATATTGGTAGAAAAATT+AGG | - | chr7.4:29220365-29220384 | None:intergenic | 20.0% |
| !! | ATGGAAAGTAAATAAGATTT+GGG | - | chr7.4:29220428-29220447 | None:intergenic | 20.0% |
| !! | GATTATTAAACCAAACATTA+TGG | - | chr7.4:29219814-29219833 | None:intergenic | 20.0% |
| !! | TATGGAAAGTAAATAAGATT+TGG | - | chr7.4:29220429-29220448 | None:intergenic | 20.0% |
| !! | TGATATTTATATGACAGAAT+AGG | + | chr7.4:29222222-29222241 | MS.gene52177:intron | 20.0% |
| !! | TGGTTTAATTGATAAGAATA+CGG | + | chr7.4:29221205-29221224 | MS.gene52177:intron | 20.0% |
| !!! | AAAATGTGTTTTTACCTTTT+TGG | + | chr7.4:29219240-29219259 | MS.gene52177:intron | 20.0% |
| !!! | CTCAATTTTTCTCTTTTAAA+AGG | - | chr7.4:29219697-29219716 | None:intergenic | 20.0% |
| !!! | TGATATATATGCATTTTACT+CGG | - | chr7.4:29221557-29221576 | None:intergenic | 20.0% |
| !!! | TTTTGGATTTTGTTTACTTT+TGG | - | chr7.4:29223331-29223350 | None:intergenic | 20.0% |
| ! | AAGATATAGAAGCAACATAT+TGG | - | chr7.4:29220378-29220397 | None:intergenic | 25.0% |
| ! | AGAACTCTGTAATATTTAAC+TGG | - | chr7.4:29223299-29223318 | None:intergenic | 25.0% |
| ! | AGTAAACAAAATCCAAAACA+TGG | + | chr7.4:29223333-29223352 | MS.gene52177:CDS | 25.0% |
| ! | AGTTTAAAAAATCAACCAGA+AGG | - | chr7.4:29222545-29222564 | None:intergenic | 25.0% |
| ! | ATACTCAAACATAACCAAAA+TGG | - | chr7.4:29219864-29219883 | None:intergenic | 25.0% |
| ! | ATATCAATGATTTCATCCTT+TGG | - | chr7.4:29222321-29222340 | None:intergenic | 25.0% |
| ! | ATGACCTTCACTATTTAATT+GGG | - | chr7.4:29220604-29220623 | None:intergenic | 25.0% |
| ! | ATTAAATGGTAGCATACTAT+AGG | + | chr7.4:29220851-29220870 | MS.gene52177:intron | 25.0% |
| ! | ATTATTTCATATCTAGCGTT+TGG | + | chr7.4:29222975-29222994 | MS.gene52177:intron | 25.0% |
| ! | ATTGAAGATCATATTCAATC+AGG | - | chr7.4:29221798-29221817 | None:intergenic | 25.0% |
| ! | CAATTAACCACTTAATTAAG+CGG | + | chr7.4:29223070-29223089 | MS.gene52177:intron | 25.0% |
| ! | CAATTTGAATTACTTGTCAT+TGG | + | chr7.4:29219916-29219935 | MS.gene52177:intron | 25.0% |
| ! | CCTTATAGCTATATGTTAAT+CGG | + | chr7.4:29220508-29220527 | MS.gene52177:intron | 25.0% |
| ! | CTAATATTCCAAAATCTGTT+AGG | + | chr7.4:29223433-29223452 | MS.gene52177:CDS | 25.0% |
| ! | CTAGAAAAAGTCTACTTTAT+TGG | - | chr7.4:29222169-29222188 | None:intergenic | 25.0% |
| ! | GGTTTAATTGATAAGAATAC+GGG | + | chr7.4:29221206-29221225 | MS.gene52177:intron | 25.0% |
| ! | GTGAAGATGATATATTGAAT+AGG | + | chr7.4:29221514-29221533 | MS.gene52177:CDS | 25.0% |
| ! | GTTTATATTATAATGGCTGA+AGG | - | chr7.4:29220755-29220774 | None:intergenic | 25.0% |
| ! | TAAAGAAAATACAATGACGA+CGG | - | chr7.4:29220719-29220738 | None:intergenic | 25.0% |
| ! | TAACATGAAAGCTATGATAT+AGG | - | chr7.4:29221710-29221729 | None:intergenic | 25.0% |
| ! | TATGATATAGGTGTAGAATA+GGG | - | chr7.4:29221698-29221717 | None:intergenic | 25.0% |
| ! | TTTAAATTTGCAGGAATTGA+AGG | + | chr7.4:29223194-29223213 | MS.gene52177:intron | 25.0% |
| !! | AAAATTAGAGTTTGTTTGGT+TGG | + | chr7.4:29219530-29219549 | MS.gene52177:intron | 25.0% |
| !! | AAATTAGAGTTTGTTTGGTT+GGG | + | chr7.4:29219531-29219550 | MS.gene52177:intron | 25.0% |
| !! | ATTTCATCCTTTGGAAAATT+TGG | - | chr7.4:29222312-29222331 | None:intergenic | 25.0% |
| !! | GATGAACAGAATAAAACTTT+TGG | + | chr7.4:29221762-29221781 | MS.gene52177:intron | 25.0% |
| !! | GTCACATGACTTTTATTAAA+TGG | + | chr7.4:29220837-29220856 | MS.gene52177:intron | 25.0% |
| !! | TCTTATTTACTTTCCATATG+TGG | + | chr7.4:29220431-29220450 | MS.gene52177:intron | 25.0% |
| !! | TTCATTTTCTTGAGATATTG+AGG | - | chr7.4:29223244-29223263 | None:intergenic | 25.0% |
| !!! | AAAACGTGTTATTACCATTT+TGG | + | chr7.4:29219847-29219866 | MS.gene52177:intron | 25.0% |
| !!! | AATAAAACTTTTGGTCTTTG+TGG | + | chr7.4:29221771-29221790 | MS.gene52177:intron | 25.0% |
| !!! | AGTGAGTTTGTTTTGTATTT+GGG | - | chr7.4:29221909-29221928 | None:intergenic | 25.0% |
| !!! | ATTGAGAGATTGTTTTGTTT+TGG | + | chr7.4:29219711-29219730 | MS.gene52177:intron | 25.0% |
| !!! | ATTTTGGTTATGTTTGAGTA+TGG | + | chr7.4:29219863-29219882 | MS.gene52177:intron | 25.0% |
| !!! | CTAACAGATTTTGGAATATT+AGG | - | chr7.4:29223435-29223454 | None:intergenic | 25.0% |
| !!! | TTAAGTGATTGTTTGGTTTT+GGG | + | chr7.4:29219193-29219212 | MS.gene52177:intron | 25.0% |
| !!! | TTGAGAGATTGTTTTGTTTT+GGG | + | chr7.4:29219712-29219731 | MS.gene52177:intron | 25.0% |
| !!! | TTGCTATTGATTTATCGTTT+TGG | + | chr7.4:29218981-29219000 | MS.gene52177:CDS | 25.0% |
| !!! | TTTAAGTGATTGTTTGGTTT+TGG | + | chr7.4:29219192-29219211 | MS.gene52177:intron | 25.0% |
| !!! | TTTGACTTTTAGAATCATCT+TGG | + | chr7.4:29223120-29223139 | MS.gene52177:intron | 25.0% |
| !!! | TTTTGTTTACTTTTGGTTGT+CGG | - | chr7.4:29223324-29223343 | None:intergenic | 25.0% |
| AACTTTCCAAAATACAAGAG+GGG | - | chr7.4:29221299-29221318 | None:intergenic | 30.0% | |
| AATATGTCAGATATTGAAGC+TGG | + | chr7.4:29221372-29221391 | MS.gene52177:CDS | 30.0% | |
| ACACTCAAACATAACCAAAA+AGG | - | chr7.4:29219595-29219614 | None:intergenic | 30.0% | |
| ACACTCAAACATAGCAAAAA+AGG | - | chr7.4:29219257-29219276 | None:intergenic | 30.0% | |
| AGAGAATTATAATGATCCTC+TGG | + | chr7.4:29221240-29221259 | MS.gene52177:intron | 30.0% | |
| AGAGGATCATTATAATTCTC+TGG | - | chr7.4:29221241-29221260 | None:intergenic | 30.0% | |
| AGCAGAAAAAGATGGAAAAT+TGG | + | chr7.4:29222255-29222274 | MS.gene52177:intron | 30.0% | |
| AGGAAAATATGGATATTGAC+GGG | + | chr7.4:29221878-29221897 | MS.gene52177:CDS | 30.0% | |
| ATATGTCAGATATTGAAGCT+GGG | + | chr7.4:29221373-29221392 | MS.gene52177:CDS | 30.0% | |
| ATGAAAATATGGACCTTGTT+GGG | + | chr7.4:29222904-29222923 | MS.gene52177:CDS | 30.0% | |
| ATGAAACAAAAAGACAGTGA+AGG | - | chr7.4:29219111-29219130 | None:intergenic | 30.0% | |
| ATGACAGAATAGGAAACATA+AGG | + | chr7.4:29222232-29222251 | MS.gene52177:intron | 30.0% | |
| ATGTATCTATGCAATGACAA+TGG | + | chr7.4:29222339-29222358 | MS.gene52177:CDS | 30.0% | |
| ATTTATATCTCAACACGGAA+TGG | - | chr7.4:29223172-29223191 | None:intergenic | 30.0% | |
| CAACTTTCCAAAATACAAGA+GGG | - | chr7.4:29221300-29221319 | None:intergenic | 30.0% | |
| CATGACCTTCACTATTTAAT+TGG | - | chr7.4:29220605-29220624 | None:intergenic | 30.0% | |
| CATTAAAGCTGAGGAAAATA+TGG | + | chr7.4:29221867-29221886 | MS.gene52177:CDS | 30.0% | |
| CCGATTAACATATAGCTATA+AGG | - | chr7.4:29220511-29220530 | None:intergenic | 30.0% | |
| CTATGATATAGGTGTAGAAT+AGG | - | chr7.4:29221699-29221718 | None:intergenic | 30.0% | |
| CTATGGTTTCTTTACATGAA+TGG | - | chr7.4:29221608-29221627 | None:intergenic | 30.0% | |
| GACATATTGTAGCATTCAAA+CGG | - | chr7.4:29221360-29221379 | None:intergenic | 30.0% | |
| GAGAAAGTGATAATAGAAAC+TGG | + | chr7.4:29221642-29221661 | MS.gene52177:intron | 30.0% | |
| GAGGAAAATATGGATATTGA+CGG | + | chr7.4:29221877-29221896 | MS.gene52177:CDS | 30.0% | |
| GTTTCTTTACATGAATGGAA+TGG | - | chr7.4:29221603-29221622 | None:intergenic | 30.0% | |
| TATATCTTATGTCAGAGTTC+AGG | + | chr7.4:29220390-29220409 | MS.gene52177:intron | 30.0% | |
| TATGGTATAACAGCAATTTG+AGG | + | chr7.4:29219426-29219445 | MS.gene52177:intron | 30.0% | |
| TCAACTTTCCAAAATACAAG+AGG | - | chr7.4:29221301-29221320 | None:intergenic | 30.0% | |
| TGAAACAAAAAGACAGTGAA+GGG | - | chr7.4:29219110-29219129 | None:intergenic | 30.0% | |
| TGATTCATAACCAACAAAAG+TGG | - | chr7.4:29223016-29223035 | None:intergenic | 30.0% | |
| TGGTTCAAAACACAATTTGA+AGG | + | chr7.4:29219883-29219902 | MS.gene52177:intron | 30.0% | |
| TGTCATACATTGCTAAGTTA+CGG | - | chr7.4:29221027-29221046 | None:intergenic | 30.0% | |
| TTGGAAAAGACAAACTATCA+TGG | - | chr7.4:29220998-29221017 | None:intergenic | 30.0% | |
| TTTAAACTTCCATCAGAACT+GGG | + | chr7.4:29222557-29222576 | MS.gene52177:CDS | 30.0% | |
| TTTAGATTAATAGCTGAGCT+TGG | + | chr7.4:29221182-29221201 | MS.gene52177:intron | 30.0% | |
| ! | ATATATGCATTTTACTCGGA+AGG | - | chr7.4:29221553-29221572 | None:intergenic | 30.0% |
| ! | TGATTGCAATTCTTGTTGTA+TGG | + | chr7.4:29222041-29222060 | MS.gene52177:CDS | 30.0% |
| ! | TTTAATGCCGCTTAATTAAG+TGG | - | chr7.4:29223080-29223099 | None:intergenic | 30.0% |
| ! | TTTTAAACTTCCATCAGAAC+TGG | + | chr7.4:29222556-29222575 | MS.gene52177:CDS | 30.0% |
| ! | TTTTCATTTCCACTGTTTCA+TGG | - | chr7.4:29221734-29221753 | None:intergenic | 30.0% |
| ! | TTTTCTTGAGATATTGAGGT+CGG | - | chr7.4:29223240-29223259 | None:intergenic | 30.0% |
| ! | TTTTCTTGATATGACTGATG+AGG | - | chr7.4:29220956-29220975 | None:intergenic | 30.0% |
| !! | AAATATTGCCTCTAAAACTC+CGG | + | chr7.4:29222758-29222777 | MS.gene52177:CDS | 30.0% |
| !! | AATTCGAAAAGTATTACCAG+AGG | - | chr7.4:29221259-29221278 | None:intergenic | 30.0% |
| !! | CGTGTGAAATTTGATTTTGT+TGG | + | chr7.4:29219334-29219353 | MS.gene52177:intron | 30.0% |
| !! | TTCACTGTCTTTTTGTTTCA+TGG | + | chr7.4:29219110-29219129 | MS.gene52177:intron | 30.0% |
| !! | TTGGTAGTTTTTGAATTCAG+TGG | + | chr7.4:29219935-29219954 | MS.gene52177:intron | 30.0% |
| !! | TTTGTTTACTTTTGGTTGTC+GGG | - | chr7.4:29223323-29223342 | None:intergenic | 30.0% |
| !!! | AATGACAATGGTTACTTTTC+CGG | + | chr7.4:29222351-29222370 | MS.gene52177:CDS | 30.0% |
| !!! | CAGTGAGTTTGTTTTGTATT+TGG | - | chr7.4:29221910-29221929 | None:intergenic | 30.0% |
| !!! | GTGAGTTTGTTTTGTATTTG+GGG | - | chr7.4:29221908-29221927 | None:intergenic | 30.0% |
| !!! | TGATGATTTTAGCTTCTTTG+TGG | + | chr7.4:29219467-29219486 | MS.gene52177:intron | 30.0% |
| !!! | TTTTCTGGCTATATCTGTAT+AGG | + | chr7.4:29220902-29220921 | MS.gene52177:intron | 30.0% |
| !!! | TTTTTGGTTATGTTTGAGTG+TGG | + | chr7.4:29219594-29219613 | MS.gene52177:intron | 30.0% |
| AAAACCTTCATTGCGTGAAT+AGG | - | chr7.4:29218939-29218958 | None:intergenic | 35.0% | |
| AAAACTCCGGCAAATAAATC+TGG | + | chr7.4:29222771-29222790 | MS.gene52177:CDS | 35.0% | |
| AAACCTTCATTGCGTGAATA+GGG | - | chr7.4:29218938-29218957 | None:intergenic | 35.0% | |
| AACCATCTTCTTGAGAGAAA+TGG | + | chr7.4:29222620-29222639 | MS.gene52177:CDS | 35.0% | |
| AAGAAGATGGTTGACATCAT+AGG | - | chr7.4:29222612-29222631 | None:intergenic | 35.0% | |
| AAGTGCTCTGTCATCATATA+TGG | + | chr7.4:29222114-29222133 | MS.gene52177:intron | 35.0% | |
| AATCTGTGACAAGATTGCAA+AGG | + | chr7.4:29222284-29222303 | MS.gene52177:intron | 35.0% | |
| ACATAAGGAGCAGAAAAAGA+TGG | + | chr7.4:29222247-29222266 | MS.gene52177:intron | 35.0% | |
| AGATTACATGAGATAGGCAA+AGG | + | chr7.4:29221820-29221839 | MS.gene52177:intron | 35.0% | |
| AGCTGTAAACTAAGCAAAGA+TGG | - | chr7.4:29220811-29220830 | None:intergenic | 35.0% | |
| ATCCATCTTCTTCACAAATC+TGG | - | chr7.4:29222866-29222885 | None:intergenic | 35.0% | |
| CAATGCAGATTACATGAGAT+AGG | + | chr7.4:29221814-29221833 | MS.gene52177:intron | 35.0% | |
| CAGATGGTATAATGTGAGTA+TGG | - | chr7.4:29221134-29221153 | None:intergenic | 35.0% | |
| CCAAAAGAGAGATAGCTATT+AGG | - | chr7.4:29221419-29221438 | None:intergenic | 35.0% | |
| CGTTAATTCTTTCACCTTGA+TGG | + | chr7.4:29220283-29220302 | MS.gene52177:intron | 35.0% | |
| GAAAAACCAGAATCCACATA+TGG | - | chr7.4:29220447-29220466 | None:intergenic | 35.0% | |
| GACGATTAATCTCTTCTCAA+AGG | + | chr7.4:29219072-29219091 | MS.gene52177:CDS | 35.0% | |
| GATGAAAATATGGACCTTGT+TGG | + | chr7.4:29222903-29222922 | MS.gene52177:CDS | 35.0% | |
| GATTACATGAGATAGGCAAA+GGG | + | chr7.4:29221821-29221840 | MS.gene52177:intron | 35.0% | |
| GCTAATGATTAGCATCTAAC+TGG | + | chr7.4:29223045-29223064 | MS.gene52177:intron | 35.0% | |
| GCTATATGTTAATCGGTGAT+AGG | + | chr7.4:29220515-29220534 | MS.gene52177:intron | 35.0% | |
| GGAAATGATTACGATTTGAG+TGG | + | chr7.4:29221441-29221460 | MS.gene52177:CDS | 35.0% | |
| GGTATAGAACAGTCAAACTA+GGG | + | chr7.4:29220025-29220044 | MS.gene52177:intron | 35.0% | |
| GTCATACATTGCTAAGTTAC+GGG | - | chr7.4:29221026-29221045 | None:intergenic | 35.0% | |
| TAATAAATACCTGTTCCTGC+CGG | - | chr7.4:29222959-29222978 | None:intergenic | 35.0% | |
| TACTTTCCATATGTGGATTC+TGG | + | chr7.4:29220438-29220457 | MS.gene52177:intron | 35.0% | |
| TCAAATTGCGCCATAATGTT+TGG | + | chr7.4:29219801-29219820 | MS.gene52177:intron | 35.0% | |
| TCAACATCACCAAACTCAAA+AGG | + | chr7.4:29223270-29223289 | MS.gene52177:CDS | 35.0% | |
| TCCATCTTCTTCACAAATCT+GGG | - | chr7.4:29222865-29222884 | None:intergenic | 35.0% | |
| TCCTATTGACATTAAAGCTG+AGG | + | chr7.4:29221858-29221877 | MS.gene52177:CDS | 35.0% | |
| TGAAAATATGGACCTTGTTG+GGG | + | chr7.4:29222905-29222924 | MS.gene52177:CDS | 35.0% | |
| TGGTATAGAACAGTCAAACT+AGG | + | chr7.4:29220024-29220043 | MS.gene52177:intron | 35.0% | |
| TGTGCCCAATTAAATAGTGA+AGG | + | chr7.4:29220597-29220616 | MS.gene52177:CDS | 35.0% | |
| TGTGGTTCAACAGCAATTTA+AGG | + | chr7.4:29219612-29219631 | MS.gene52177:intron | 35.0% | |
| TTCATCACAGTTAAACGTAC+CGG | - | chr7.4:29222373-29222392 | None:intergenic | 35.0% | |
| TTGTGTGTTGTGTTTGAGTA+TGG | + | chr7.4:29219408-29219427 | MS.gene52177:intron | 35.0% | |
| ! | AAAGGAGCCAAATTTTCCAA+AGG | + | chr7.4:29222302-29222321 | MS.gene52177:CDS | 35.0% |
| ! | AAATGATCTCTTTTGTTGCC+CGG | - | chr7.4:29221949-29221968 | None:intergenic | 35.0% |
| ! | ACTTTGTTTGCAGTGAATGA+TGG | + | chr7.4:29222486-29222505 | MS.gene52177:intron | 35.0% |
| ! | AGTTTTTGAATTCAGTGGAG+TGG | + | chr7.4:29219940-29219959 | MS.gene52177:intron | 35.0% |
| ! | ATAGCTATCTCTCTTTTGGT+TGG | + | chr7.4:29221420-29221439 | MS.gene52177:CDS | 35.0% |
| ! | ATCAGTTTTACGTTGTCAAG+TGG | + | chr7.4:29222721-29222740 | MS.gene52177:CDS | 35.0% |
| ! | CAATCACATTTAAAACCCTC+TGG | - | chr7.4:29222027-29222046 | None:intergenic | 35.0% |
| ! | CCTAATAGCTATCTCTCTTT+TGG | + | chr7.4:29221416-29221435 | MS.gene52177:CDS | 35.0% |
| ! | GCAATTCTTGTTGTATGGTA+TGG | + | chr7.4:29222046-29222065 | MS.gene52177:intron | 35.0% |
| ! | TCCTCAGCTTTAATGTCAAT+AGG | - | chr7.4:29221862-29221881 | None:intergenic | 35.0% |
| ! | TGCTAAGTTACGGGAATTTT+TGG | - | chr7.4:29221017-29221036 | None:intergenic | 35.0% |
| ! | TTCATGTGAATTTTGTGTCG+CGG | + | chr7.4:29221975-29221994 | MS.gene52177:CDS | 35.0% |
| !! | CAACCGATAGTTTGCTATTT+GGG | + | chr7.4:29222652-29222671 | MS.gene52177:CDS | 35.0% |
| !! | CAACTATCATCCACTTTTGT+TGG | + | chr7.4:29223003-29223022 | MS.gene52177:intron | 35.0% |
| !! | TGTATTTTGGAAAGTTGACG+TGG | + | chr7.4:29221303-29221322 | MS.gene52177:intron | 35.0% |
| !! | TTTAGTCTTGTGTGTTGAGT+TGG | + | chr7.4:29220004-29220023 | MS.gene52177:intron | 35.0% |
| !! | TTTATTTGCCGGAGTTTTAG+AGG | - | chr7.4:29222769-29222788 | None:intergenic | 35.0% |
| !!! | ACCTCAGACTCACTTTTTTT+CGG | + | chr7.4:29219050-29219069 | MS.gene52177:CDS | 35.0% |
| !!! | GAGATTGTTTTGTTTTGGGT+TGG | + | chr7.4:29219716-29219735 | MS.gene52177:intron | 35.0% |
| !!! | TTTTGAGTTTGGTGATGTTG+AGG | - | chr7.4:29223271-29223290 | None:intergenic | 35.0% |
| AAAAATGACAGCCAAGACAG+TGG | + | chr7.4:29223378-29223397 | MS.gene52177:CDS | 40.0% | |
| AAACGTGTGAAGACGAGATA+CGG | + | chr7.4:29222696-29222715 | MS.gene52177:CDS | 40.0% | |
| AAACTCACTGCTCATTCTGT+GGG | + | chr7.4:29221920-29221939 | MS.gene52177:CDS | 40.0% | |
| AATGTGAGTATGGCAAGATG+AGG | - | chr7.4:29221124-29221143 | None:intergenic | 40.0% | |
| AATTCAATCAGCCCCAATTG+CGG | - | chr7.4:29219287-29219306 | None:intergenic | 40.0% | |
| ACAGTGATGCATTCCTCTTT+GGG | + | chr7.4:29220646-29220665 | MS.gene52177:CDS | 40.0% | |
| ACGATTTGAGTGGTGTTCAA+GGG | + | chr7.4:29221451-29221470 | MS.gene52177:CDS | 40.0% | |
| AGATTAATAGCTGAGCTTGG+TGG | + | chr7.4:29221185-29221204 | MS.gene52177:intron | 40.0% | |
| AGCCAGAAAACTCAACTTGT+TGG | - | chr7.4:29220892-29220911 | None:intergenic | 40.0% | |
| AGCCATTTCTCTCAAGAAGA+TGG | - | chr7.4:29222625-29222644 | None:intergenic | 40.0% | |
| AGGTTGCTTGAAAAAACCAG+AGG | + | chr7.4:29222008-29222027 | MS.gene52177:CDS | 40.0% | |
| ATAATCCGCCGAATGTATGA+CGG | - | chr7.4:29222585-29222604 | None:intergenic | 40.0% | |
| ATGTGAGTATGGCAAGATGA+GGG | - | chr7.4:29221123-29221142 | None:intergenic | 40.0% | |
| ATTCCTGTACTGAAGGCTAA+AGG | + | chr7.4:29220558-29220577 | MS.gene52177:CDS | 40.0% | |
| CAGAAGAAGTGAAAAGGTTC+CGG | + | chr7.4:29222937-29222956 | MS.gene52177:CDS | 40.0% | |
| CAGTGACAAAATCGATCTAG+AGG | - | chr7.4:29222072-29222091 | None:intergenic | 40.0% | |
| CCAAATAGCAAACTATCGGT+TGG | - | chr7.4:29222654-29222673 | None:intergenic | 40.0% | |
| CCATCTTCTTCACAAATCTG+GGG | - | chr7.4:29222864-29222883 | None:intergenic | 40.0% | |
| CTCTCAAATTCTCTCAGCTA+TGG | - | chr7.4:29221625-29221644 | None:intergenic | 40.0% | |
| CTGCCCAAATAGCAAACTAT+CGG | - | chr7.4:29222658-29222677 | None:intergenic | 40.0% | |
| CTTACGCAGAAGAAGTGAAA+AGG | + | chr7.4:29222931-29222950 | MS.gene52177:CDS | 40.0% | |
| GACAAACTATCATGGAAGAC+TGG | - | chr7.4:29220990-29221009 | None:intergenic | 40.0% | |
| GGTTGCTTGAAAAAACCAGA+GGG | + | chr7.4:29222009-29222028 | MS.gene52177:CDS | 40.0% | |
| TAATGCATTTAGCCCCAAAG+AGG | - | chr7.4:29220662-29220681 | None:intergenic | 40.0% | |
| TACGATTTGAGTGGTGTTCA+AGG | + | chr7.4:29221450-29221469 | MS.gene52177:CDS | 40.0% | |
| TAGAACAGTCAAACTAGGGA+TGG | + | chr7.4:29220029-29220048 | MS.gene52177:intron | 40.0% | |
| TCAACCAGAAGGTCCATATT+CGG | - | chr7.4:29222534-29222553 | None:intergenic | 40.0% | |
| TCATGTTAGCCATGAAACAG+TGG | + | chr7.4:29221722-29221741 | MS.gene52177:intron | 40.0% | |
| TCCGAAAAAAAGTGAGTCTG+AGG | - | chr7.4:29219054-29219073 | None:intergenic | 40.0% | |
| TGCACTTAGTTGCTAAAACG+TGG | + | chr7.4:29220331-29220350 | MS.gene52177:intron | 40.0% | |
| TGCATGCCAGATTTATTTGC+CGG | - | chr7.4:29222780-29222799 | None:intergenic | 40.0% | |
| TTCCAAAATACAAGAGGGGT+AGG | - | chr7.4:29221295-29221314 | None:intergenic | 40.0% | |
| ! | AAAAAAGTGAGTCTGAGGTG+AGG | - | chr7.4:29219049-29219068 | None:intergenic | 40.0% |
| ! | AAGATGTGTTCAAGAGTGTG+TGG | + | chr7.4:29220258-29220277 | MS.gene52177:CDS | 40.0% |
| ! | CCAGGATTGCTAGATTTTTC+CGG | + | chr7.4:29220161-29220180 | MS.gene52177:CDS | 40.0% |
| ! | GATGACTCTTCTCCATGTTT+TGG | - | chr7.4:29223348-29223367 | None:intergenic | 40.0% |
| ! | GCATGATGTTGATGAAACAG+TGG | + | chr7.4:29222815-29222834 | MS.gene52177:CDS | 40.0% |
| ! | GCCAGAAAACTCAACTTGTT+GGG | - | chr7.4:29220891-29220910 | None:intergenic | 40.0% |
| ! | GTGACTTGTGATAACCATCA+AGG | - | chr7.4:29220300-29220319 | None:intergenic | 40.0% |
| ! | TTCCTACCCCTCTTGTATTT+TGG | + | chr7.4:29221290-29221309 | MS.gene52177:intron | 40.0% |
| ! | TTCTTTTCCTTTCTGCATGC+AGG | + | chr7.4:29221332-29221351 | MS.gene52177:intron | 40.0% |
| ! | TTTGTAGTTTGGAGCGTTTC+CGG | + | chr7.4:29220096-29220115 | MS.gene52177:intron | 40.0% |
| !! | ACGGTCACTTACTTTGGAAT+TGG | - | chr7.4:29220700-29220719 | None:intergenic | 40.0% |
| !! | AGGAACTTGCTAAGCTACTT+GGG | + | chr7.4:29220535-29220554 | MS.gene52177:intron | 40.0% |
| !! | CCAACCGATAGTTTGCTATT+TGG | + | chr7.4:29222651-29222670 | MS.gene52177:CDS | 40.0% |
| !! | CGGTCACTTACTTTGGAATT+GGG | - | chr7.4:29220699-29220718 | None:intergenic | 40.0% |
| !! | GTATGCATGCTTTTTGCAGA+TGG | - | chr7.4:29221150-29221169 | None:intergenic | 40.0% |
| !! | TAGGAACTTGCTAAGCTACT+TGG | + | chr7.4:29220534-29220553 | MS.gene52177:intron | 40.0% |
| !!! | AACTGGACACCTTTTGAGTT+TGG | - | chr7.4:29223282-29223301 | None:intergenic | 40.0% |
| !!! | GTCTTGGCTGTCATTTTTCT+TGG | - | chr7.4:29223376-29223395 | None:intergenic | 40.0% |
| AAGACCGAATATGGACCTTC+TGG | + | chr7.4:29222527-29222546 | MS.gene52177:CDS | 45.0% | |
| AAGAGGAATGCATCACTGTC+AGG | - | chr7.4:29220645-29220664 | None:intergenic | 45.0% | |
| AAGCCCTATTCACGCAATGA+AGG | + | chr7.4:29218932-29218951 | MS.gene52177:CDS | 45.0% | |
| ACTGGGATCCGTCATACATT+CGG | + | chr7.4:29222574-29222593 | MS.gene52177:CDS | 45.0% | |
| ACTTGGGATTCCTGTACTGA+AGG | + | chr7.4:29220551-29220570 | MS.gene52177:CDS | 45.0% | |
| AGTGGAGTGGAGTTTGATAG+TGG | + | chr7.4:29219953-29219972 | MS.gene52177:intron | 45.0% | |
| AGTGTAGTTCAGCCGCAATT+GGG | + | chr7.4:29219272-29219291 | MS.gene52177:intron | 45.0% | |
| ATCCTGGCCTGTGATTTCAA+CGG | - | chr7.4:29220148-29220167 | None:intergenic | 45.0% | |
| ATGACGACGGTCACTTACTT+TGG | - | chr7.4:29220706-29220725 | None:intergenic | 45.0% | |
| CAAACTCACTGCTCATTCTG+TGG | + | chr7.4:29221919-29221938 | MS.gene52177:CDS | 45.0% | |
| CAGTGATGCATTCCTCTTTG+GGG | + | chr7.4:29220647-29220666 | MS.gene52177:CDS | 45.0% | |
| CCCCAGATTTGTGAAGAAGA+TGG | + | chr7.4:29222861-29222880 | MS.gene52177:CDS | 45.0% | |
| CCGGAAAAATCTAGCAATCC+TGG | - | chr7.4:29220164-29220183 | None:intergenic | 45.0% | |
| CTATCATGGAAGACTGGATG+AGG | - | chr7.4:29220984-29221003 | None:intergenic | 45.0% | |
| CTCATGGGAAAGACCGAATA+TGG | + | chr7.4:29222518-29222537 | MS.gene52177:CDS | 45.0% | |
| GAAACACCTTCTTCAGCAAC+CGG | - | chr7.4:29220214-29220233 | None:intergenic | 45.0% | |
| GAACTAACAGAAGTCTGACG+CGG | - | chr7.4:29221079-29221098 | None:intergenic | 45.0% | |
| GACAGTGATGCATTCCTCTT+TGG | + | chr7.4:29220645-29220664 | MS.gene52177:CDS | 45.0% | |
| GCGGCATTAAACCCCTTAAA+TGG | + | chr7.4:29223089-29223108 | MS.gene52177:intron | 45.0% | |
| GGACTTGACGATTTCCTCTT+TGG | - | chr7.4:29223414-29223433 | None:intergenic | 45.0% | |
| GTCAAGTGGAAACGTGCAAT+GGG | + | chr7.4:29222735-29222754 | MS.gene52177:CDS | 45.0% | |
| TCAGATATTGAAGCTGGGCT+TGG | + | chr7.4:29221378-29221397 | MS.gene52177:CDS | 45.0% | |
| TCCATCTCCGTTGAAATCAC+AGG | + | chr7.4:29220138-29220157 | MS.gene52177:CDS | 45.0% | |
| TGAGGTGAGGTTTCTTGACA+GGG | - | chr7.4:29219036-29219055 | None:intergenic | 45.0% | |
| TGTCAAGTGGAAACGTGCAA+TGG | + | chr7.4:29222734-29222753 | MS.gene52177:CDS | 45.0% | |
| TTCCGGTGTTCGTTGTTGAT+GGG | + | chr7.4:29220113-29220132 | MS.gene52177:CDS | 45.0% | |
| TTGAGTGGTGTTCAAGGGAT+CGG | + | chr7.4:29221456-29221475 | MS.gene52177:CDS | 45.0% | |
| TTTCCGGTGTTCGTTGTTGA+TGG | + | chr7.4:29220112-29220131 | MS.gene52177:CDS | 45.0% | |
| ! | CAAGCCTTATCCGACTAAGT+GGG | + | chr7.4:29219765-29219784 | MS.gene52177:intron | 45.0% |
| ! | CAAGCTAGTCGACTCAATTC+CGG | - | chr7.4:29220191-29220210 | None:intergenic | 45.0% |
| ! | GCTAGATTTTTCCGGTCTTC+CGG | + | chr7.4:29220169-29220188 | MS.gene52177:CDS | 45.0% |
| ! | TCTCCTTTAGCCTTCAGTAC+AGG | - | chr7.4:29220564-29220583 | None:intergenic | 45.0% |
| ! | TGATGGACCTCAGATCTCAT+GGG | + | chr7.4:29222503-29222522 | MS.gene52177:CDS | 45.0% |
| ! | TGTGAATTTTGTGTCGCGGA+TGG | + | chr7.4:29221979-29221998 | MS.gene52177:CDS | 45.0% |
| !! | AAACTCAACTTGTTGGGCAC+AGG | - | chr7.4:29220885-29220904 | None:intergenic | 45.0% |
| !! | AACTCAACTTGTTGGGCACA+GGG | - | chr7.4:29220884-29220903 | None:intergenic | 45.0% |
| !! | AATTGAGTCGACTAGCTTGC+CGG | + | chr7.4:29220192-29220211 | MS.gene52177:CDS | 45.0% |
| !! | ATGATGGACCTCAGATCTCA+TGG | + | chr7.4:29222502-29222521 | MS.gene52177:CDS | 45.0% |
| !! | CTGAAGAAGGTGTTTCAGCT+GGG | + | chr7.4:29220218-29220237 | MS.gene52177:CDS | 45.0% |
| !! | GCCCAACAAGTTGAGTTTTC+TGG | + | chr7.4:29220887-29220906 | MS.gene52177:intron | 45.0% |
| !! | GGGTGTTGGTGGTAATTTCT+GGG | + | chr7.4:29218901-29218920 | MS.gene52177:CDS | 45.0% |
| !! | TGGGTGTTGGTGGTAATTTC+TGG | + | chr7.4:29218900-29218919 | MS.gene52177:CDS | 45.0% |
| !!! | TTTTTTATTATATTATCAAA+AGG | - | chr7.4:29219514-29219533 | None:intergenic | 5.0% |
| AACGGTTCCTGCATGCAGAA+AGG | - | chr7.4:29221342-29221361 | None:intergenic | 50.0% | |
| AAGCTGGGCTTGGATTGAAG+AGG | + | chr7.4:29221388-29221407 | MS.gene52177:CDS | 50.0% | |
| AATGACAGCCAAGACAGTGG+AGG | + | chr7.4:29223381-29223400 | MS.gene52177:CDS | 50.0% | |
| AGAAGTGAAAAGGTTCCGGC+AGG | + | chr7.4:29222941-29222960 | MS.gene52177:CDS | 50.0% | |
| ATGTAGCCGACCCACTTAGT+CGG | - | chr7.4:29219778-29219797 | None:intergenic | 50.0% | |
| CCACTTAGTCGGATAAGGCT+TGG | - | chr7.4:29219767-29219786 | None:intergenic | 50.0% | |
| CCTTATCCGACTAAGTGGGT+CGG | + | chr7.4:29219769-29219788 | MS.gene52177:intron | 50.0% | |
| CTGAGGTGAGGTTTCTTGAC+AGG | - | chr7.4:29219037-29219056 | None:intergenic | 50.0% | |
| GAGGTGAGGTTTCTTGACAG+GGG | - | chr7.4:29219035-29219054 | None:intergenic | 50.0% | |
| GAGTGTAGTTCAGCCGCAAT+TGG | + | chr7.4:29219271-29219290 | MS.gene52177:intron | 50.0% | |
| GCCTGTGATTTCAACGGAGA+TGG | - | chr7.4:29220142-29220161 | None:intergenic | 50.0% | |
| GGTCTTTCCCATGAGATCTG+AGG | - | chr7.4:29222513-29222532 | None:intergenic | 50.0% | |
| GTCCCATCAACAACGAACAC+CGG | - | chr7.4:29220118-29220137 | None:intergenic | 50.0% | |
| GTGGAGGCTCAAAACCAAAG+AGG | + | chr7.4:29223397-29223416 | MS.gene52177:CDS | 50.0% | |
| GTGTAGTTCAGCCGCAATTG+GGG | + | chr7.4:29219273-29219292 | MS.gene52177:intron | 50.0% | |
| TCGACTCAATTCCGGAAGAC+CGG | - | chr7.4:29220183-29220202 | None:intergenic | 50.0% | |
| ! | AGGCGACGCCTAACAGATTT+TGG | - | chr7.4:29223444-29223463 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCGACTAAG+TGG | + | chr7.4:29219764-29219783 | MS.gene52177:intron | 50.0% |
| !! | AAGAAGGTGTTTCAGCTGGG+AGG | + | chr7.4:29220221-29220240 | MS.gene52177:CDS | 50.0% |
| !! | ATGACGGATCCCAGTTCTGA+TGG | - | chr7.4:29222569-29222588 | None:intergenic | 50.0% |
| !! | GCGTCGCCTTTTGTTTGACT+AGG | + | chr7.4:29223455-29223474 | MS.gene52177:CDS | 50.0% |
| !! | GCTGAAGAAGGTGTTTCAGC+TGG | + | chr7.4:29220217-29220236 | MS.gene52177:CDS | 50.0% |
| !! | GTTTTGAGCCTCCACTGTCT+TGG | - | chr7.4:29223392-29223411 | None:intergenic | 50.0% |
| CCGACCCACTTAGTCGGATA+AGG | - | chr7.4:29219772-29219791 | None:intergenic | 55.0% | |
| CTCCGTTGAAATCACAGGCC+AGG | + | chr7.4:29220143-29220162 | MS.gene52177:CDS | 55.0% | |
| CTGCTCATTCTGTGGGCATC+CGG | + | chr7.4:29221927-29221946 | MS.gene52177:CDS | 55.0% | |
| GAAAAGGTTCCGGCAGGAAC+AGG | + | chr7.4:29222947-29222966 | MS.gene52177:CDS | 55.0% | |
| GACTAAGTGGGTCGGCTACA+TGG | + | chr7.4:29219777-29219796 | MS.gene52177:intron | 55.0% | |
| GGCAAGATGAGGGCTCACAA+TGG | - | chr7.4:29221113-29221132 | None:intergenic | 55.0% | |
| GGGATCCGTCATACATTCGG+CGG | + | chr7.4:29222577-29222596 | MS.gene52177:CDS | 55.0% | |
| TGCTCATTCTGTGGGCATCC+GGG | + | chr7.4:29221928-29221947 | MS.gene52177:CDS | 55.0% | |
| TGTGTCGCGGATGGCAATGA+AGG | + | chr7.4:29221988-29222007 | MS.gene52177:CDS | 55.0% | |
| ! | AGCTTGCCGGTTGCTGAAGA+AGG | + | chr7.4:29220205-29220224 | MS.gene52177:CDS | 55.0% |
| CTGCGTAAGCAGCCCCAACA+AGG | - | chr7.4:29222920-29222939 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 29218899 | 29223476 | 29218899 | ID=MS.gene52177 |
| chr7.4 | mRNA | 29218899 | 29223476 | 29218899 | ID=MS.gene52177.t1;Parent=MS.gene52177 |
| chr7.4 | exon | 29218899 | 29219093 | 29218899 | ID=MS.gene52177.t1.exon1;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29218899 | 29219093 | 29218899 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29220103 | 29220279 | 29220103 | ID=MS.gene52177.t1.exon2;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29220103 | 29220279 | 29220103 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29220537 | 29220707 | 29220537 | ID=MS.gene52177.t1.exon3;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29220537 | 29220707 | 29220537 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29221354 | 29221535 | 29221354 | ID=MS.gene52177.t1.exon4;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29221354 | 29221535 | 29221354 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29221822 | 29222062 | 29221822 | ID=MS.gene52177.t1.exon5;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29221822 | 29222062 | 29221822 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29222297 | 29222372 | 29222297 | ID=MS.gene52177.t1.exon6;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29222297 | 29222372 | 29222297 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29222499 | 29222968 | 29222499 | ID=MS.gene52177.t1.exon7;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29222499 | 29222968 | 29222499 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| chr7.4 | exon | 29223207 | 29223476 | 29223207 | ID=MS.gene52177.t1.exon8;Parent=MS.gene52177.t1 |
| chr7.4 | CDS | 29223207 | 29223476 | 29223207 | ID=cds.MS.gene52177.t1;Parent=MS.gene52177.t1 |
| Gene Sequence |
| Protein sequence |
