AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52316

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52316.t1 MTR_7g084400 98.596 356 5 0 5 360 133 488 0.0 722
MS.gene52316.t1 MTR_8g096050 72.877 365 92 2 1 360 143 505 0.0 560
MS.gene52316.t1 MTR_7g084400 92.177 294 18 3 3 294 125 415 0.0 542
MS.gene52316.t1 MTR_7g084400 29.730 185 112 4 181 355 207 383 7.92e-22 96.3
MS.gene52316.t1 MTR_3g098460 69.315 365 105 2 1 360 121 483 0.0 541
MS.gene52316.t1 MTR_5g009500 40.063 317 150 7 80 360 29 341 5.27e-69 220
MS.gene52316.t1 MTR_5g009500 28.922 204 126 5 78 262 134 337 8.38e-16 78.2
MS.gene52316.t1 MTR_8g027975 38.782 312 153 7 83 360 49 356 4.31e-68 218
MS.gene52316.t1 MTR_3g107510 36.071 280 168 5 83 357 120 393 8.46e-50 172
MS.gene52316.t1 MTR_1g012030 36.879 282 167 4 81 357 135 410 1.40e-49 172
MS.gene52316.t1 MTR_4g114320 36.525 282 168 5 81 357 119 394 5.16e-49 170
MS.gene52316.t1 MTR_7g064980 32.550 298 170 7 85 358 25 315 6.01e-47 162
MS.gene52316.t1 MTR_7g064980 30.392 204 120 5 170 355 14 213 4.93e-22 95.5
MS.gene52316.t1 MTR_7g064980 28.821 229 147 5 45 266 98 317 8.72e-21 92.0
MS.gene52316.t1 MTR_3g104600 32.450 302 168 6 85 357 35 329 1.29e-46 162
MS.gene52316.t1 MTR_6g091800 34.459 296 163 7 85 357 19 306 2.29e-45 158
MS.gene52316.t1 MTR_6g091800 31.875 320 163 7 85 357 19 330 6.63e-42 149
MS.gene52316.t1 MTR_2g436930 30.921 304 169 6 87 351 17 318 4.52e-41 147
MS.gene52316.t1 MTR_2g436930 28.796 191 118 4 183 355 17 207 3.66e-20 90.5
MS.gene52316.t1 MTR_2g436930 24.752 202 130 6 77 257 118 318 3.43e-11 63.9
MS.gene52316.t1 MTR_5g081150 33.446 296 166 8 85 357 34 321 1.11e-40 146
MS.gene52316.t1 MTR_5g081150 32.323 198 114 5 174 355 27 220 5.18e-18 84.3
MS.gene52316.t1 MTR_5g081150 33.696 184 110 4 84 260 140 318 3.05e-17 82.0
MS.gene52316.t1 MTR_4g119770 29.393 313 178 6 87 358 16 326 1.14e-38 140
MS.gene52316.t1 MTR_6g091800 32.872 289 136 7 85 357 19 265 4.18e-38 137
MS.gene52316.t1 MTR_6g091800 35.593 236 128 6 85 304 19 246 1.47e-36 133
MS.gene52316.t1 MTR_6g091800 32.821 195 105 4 181 355 19 207 1.78e-24 101
MS.gene52316.t1 MTR_6g091800 30.351 313 136 7 85 357 19 289 1.31e-34 129
MS.gene52316.t1 MTR_6g091800 30.464 302 155 7 85 339 19 312 1.53e-34 129
MS.gene52316.t1 MTR_8g090210 32.787 305 174 10 79 360 104 400 5.12e-34 130
MS.gene52316.t1 MTR_6g034145 30.469 256 152 4 121 357 4 252 6.12e-34 126
MS.gene52316.t1 MTR_6g034145 26.020 196 120 5 85 261 61 250 2.24e-14 72.8
MS.gene52316.t1 MTR_7g109135 31.507 292 170 7 87 357 24 306 1.72e-33 126
MS.gene52316.t1 MTR_6g091800 32.308 260 128 6 85 304 19 270 4.25e-33 125
MS.gene52316.t1 MTR_6g091800 30.137 219 103 5 181 355 19 231 3.04e-21 92.8
MS.gene52316.t1 MTR_4g016730 31.636 275 152 10 96 355 100 353 1.14e-32 125
MS.gene52316.t1 MTR_7g068340 29.304 273 164 7 96 355 98 354 3.12e-32 124
MS.gene52316.t1 MTR_7g068340 30.409 171 111 2 192 357 98 265 5.17e-22 96.3
MS.gene52316.t1 MTR_7g068340 25.556 180 121 3 85 262 187 355 5.40e-12 67.0
MS.gene52316.t1 MTR_6g092210 30.000 250 155 4 121 357 4 246 4.61e-32 121
MS.gene52316.t1 MTR_6g092210 25.926 189 121 6 85 260 61 243 1.55e-12 67.4
MS.gene52316.t1 MTR_3g074490 30.333 300 180 6 83 360 114 406 5.85e-31 121
MS.gene52316.t1 MTR_3g104500 28.188 298 187 7 83 359 32 323 1.99e-30 118
MS.gene52316.t1 MTR_1g087840 32.509 283 159 8 97 357 31 303 8.41e-30 116
MS.gene52316.t1 MTR_8g076760 33.569 283 159 8 101 359 30 307 5.24e-29 114
MS.gene52316.t1 MTR_8g076760 27.907 172 112 4 195 357 28 196 1.15e-16 80.1
MS.gene52316.t1 MTR_7g109135 33.051 236 136 6 135 357 2 228 1.73e-28 111
MS.gene52316.t1 MTR_4g005330 28.146 302 178 7 83 357 64 353 2.35e-28 114
MS.gene52316.t1 MTR_2g436930 29.258 229 138 4 145 351 2 228 4.54e-28 110
MS.gene52316.t1 MTR_2g436930 24.752 202 130 6 77 257 28 228 1.29e-11 64.3
MS.gene52316.t1 MTR_4g005330 27.815 302 179 7 86 360 1 290 6.57e-28 111
MS.gene52316.t1 MTR_7g109135 29.110 292 170 8 87 357 24 299 9.71e-28 111
MS.gene52316.t1 MTR_4g119770 30.364 247 143 5 87 306 16 260 1.15e-27 109
MS.gene52316.t1 MTR_4g119770 24.870 193 125 3 183 355 16 208 1.12e-18 85.1
MS.gene52316.t1 MTR_5g055410 31.900 279 166 8 97 357 33 305 2.43e-27 110
MS.gene52316.t1 MTR_4g012850 26.950 282 184 6 83 351 14 286 2.43e-25 104
MS.gene52316.t1 MTR_7g109135 36.207 174 92 5 197 357 40 207 3.22e-25 102
MS.gene52316.t1 MTR_1g095780 24.444 360 251 7 1 358 445 785 1.59e-24 105
MS.gene52316.t1 MTR_4g018750 32.270 282 159 8 95 355 25 295 2.03e-24 101
MS.gene52316.t1 MTR_6g091910 33.333 195 107 5 181 357 19 208 2.87e-24 99.4
MS.gene52316.t1 MTR_6g091910 27.979 193 116 5 85 260 19 205 1.16e-18 84.0
MS.gene52316.t1 MTR_5g081150 32.287 223 127 7 85 291 34 248 6.06e-23 96.7
MS.gene52316.t1 MTR_5g081150 32.323 198 114 5 174 355 27 220 1.21e-18 84.7
MS.gene52316.t1 MTR_5g081150 32.287 223 127 7 85 291 34 248 8.34e-23 96.3
MS.gene52316.t1 MTR_5g081150 32.323 198 114 5 174 355 27 220 1.19e-18 84.7
MS.gene52316.t1 MTR_1g097890 28.571 287 164 7 82 357 48 304 1.16e-22 97.1
MS.gene52316.t1 MTR_3g028590 29.310 290 162 8 85 345 97 372 5.29e-22 96.7
MS.gene52316.t1 MTR_3g028590 29.310 290 162 8 85 345 93 368 6.12e-22 96.3
MS.gene52316.t1 MTR_5g073040 26.910 301 189 9 72 354 24 311 9.08e-22 94.7
MS.gene52316.t1 MTR_5g073040 28.492 179 123 2 181 358 39 213 5.97e-19 87.0
MS.gene52316.t1 MTR_8g098240 26.962 293 193 6 74 360 313 590 1.90e-21 95.9
MS.gene52316.t1 MTR_8g098240 24.121 199 144 3 160 357 299 491 4.66e-12 67.8
MS.gene52316.t1 MTR_8g092080 28.873 284 167 7 82 357 49 305 5.26e-21 92.8
MS.gene52316.t1 MTR_1g090330 30.588 170 104 3 180 338 13 179 5.45e-21 92.4
MS.gene52316.t1 MTR_1g090330 23.826 298 194 7 80 355 9 295 6.26e-18 83.6
MS.gene52316.t1 MTR_7g066690 29.964 277 166 6 98 355 30 297 1.06e-20 91.7
MS.gene52316.t1 MTR_8g036880 27.622 286 173 6 85 345 102 378 1.89e-20 92.0
MS.gene52316.t1 MTR_3g025800 25.309 324 200 9 72 358 14 332 2.61e-20 91.3
MS.gene52316.t1 MTR_8g066975 26.974 304 176 7 85 357 8 296 8.20e-20 89.0
MS.gene52316.t1 MTR_3g462140 28.620 297 187 5 77 355 7 296 1.66e-19 88.2
MS.gene52316.t1 MTR_6g091800 34.706 170 91 5 85 238 19 184 3.95e-19 84.7
MS.gene52316.t1 MTR_6g091800 32.558 172 90 4 181 332 19 184 9.72e-19 83.6
MS.gene52316.t1 MTR_8g107270 25.442 283 182 7 85 345 18 293 4.16e-19 87.0
MS.gene52316.t1 MTR_6g091800 37.903 124 71 2 85 205 19 139 7.71e-19 84.3
MS.gene52316.t1 MTR_6g091800 29.592 196 88 5 181 332 19 208 1.13e-15 75.5
MS.gene52316.t1 MTR_4g078545 27.719 285 173 8 85 345 75 350 2.62e-18 85.5
MS.gene52316.t1 MTR_4g018750 32.000 250 138 8 95 323 25 263 3.63e-18 84.0
MS.gene52316.t1 MTR_6g034515 27.206 272 164 9 101 354 83 338 8.83e-18 84.0
MS.gene52316.t1 MTR_2g102010 26.132 287 195 5 83 358 15 295 2.03e-17 82.0
MS.gene52316.t1 MTR_5g030530 26.246 301 186 9 83 357 6 296 3.01e-17 81.6
MS.gene52316.t1 MTR_1g088995 29.412 153 102 3 185 334 37 186 1.03e-16 79.0
MS.gene52316.t1 MTR_1g088995 29.412 153 102 3 185 334 37 186 3.10e-16 79.0
MS.gene52316.t1 MTR_1g088995 25.430 291 195 7 82 360 30 310 8.02e-13 68.9
MS.gene52316.t1 MTR_2g098070 28.070 285 172 8 85 345 66 341 3.73e-16 79.3
MS.gene52316.t1 MTR_7g015870 25.000 272 187 6 101 355 41 312 1.42e-15 77.0
MS.gene52316.t1 MTR_7g015870 28.070 171 113 3 194 355 38 207 2.83e-13 70.1
MS.gene52316.t1 MTR_7g015870 25.091 275 189 6 98 355 34 308 3.66e-15 75.9
MS.gene52316.t1 MTR_3g100570 24.691 324 178 9 83 357 4 310 4.64e-15 75.5
MS.gene52316.t1 MTR_4g057850 24.662 296 194 8 77 353 14 299 5.01e-15 75.5
MS.gene52316.t1 MTR_5g081910 27.727 220 125 7 165 353 25 241 6.17e-15 74.3
MS.gene52316.t1 MTR_5g081910 25.475 263 157 8 127 353 56 315 7.17e-15 75.1
MS.gene52316.t1 MTR_7g117030 23.200 250 173 6 127 358 88 336 1.61e-14 74.3
MS.gene52316.t1 MTR_7g083790 30.942 223 141 6 82 295 78 296 4.05e-14 73.2
MS.gene52316.t1 MTR_6g033280 26.950 282 190 8 86 359 64 337 7.73e-14 72.4
MS.gene52316.t1 MTR_8g099910 29.956 227 138 6 82 295 69 287 8.85e-14 72.0
MS.gene52316.t1 MTR_6g015860 29.379 177 107 5 194 357 30 201 9.68e-14 71.6
MS.gene52316.t1 MTR_6g015860 29.592 196 120 6 86 265 115 308 9.56e-13 68.6
MS.gene52316.t1 MTR_6g015860 22.819 298 197 9 83 355 15 304 2.88e-12 67.4
MS.gene52316.t1 MTR_8g086070 24.567 289 185 7 85 355 21 294 1.19e-13 71.2
MS.gene52316.t1 MTR_1g036280 24.296 284 159 10 130 359 76 357 1.22e-13 71.6
MS.gene52316.t1 MTR_4g088545 29.412 187 114 4 182 354 13 195 1.25e-13 70.1
MS.gene52316.t1 MTR_4g088545 28.877 187 115 4 182 354 13 195 2.15e-13 70.1
MS.gene52316.t1 MTR_2g032610 23.711 291 196 8 83 351 27 313 2.92e-13 70.1
MS.gene52316.t1 MTR_4g088545 28.877 187 115 4 182 354 13 195 3.55e-13 69.7
MS.gene52316.t1 MTR_4g094578 23.860 285 189 10 85 354 29 300 4.29e-12 66.6
MS.gene52316.t1 MTR_8g076690 31.429 140 70 4 224 359 164 281 6.79e-11 63.2
MS.gene52316.t1 MTR_8g086070 29.940 167 98 6 184 340 24 181 8.06e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52316.t1 AT5G51050 70.474 359 104 2 3 360 141 498 0.0 533
MS.gene52316.t1 AT5G61810 67.590 361 110 3 1 360 124 478 1.68e-180 509
MS.gene52316.t1 AT5G07320 69.274 358 105 2 3 360 127 479 1.85e-179 506
MS.gene52316.t1 AT5G61810 68.035 341 102 3 21 360 1 335 2.81e-173 485
MS.gene52316.t1 AT4G01100 39.103 312 152 6 83 360 40 347 1.87e-70 224
MS.gene52316.t1 AT4G01100 38.037 326 150 7 83 360 40 361 3.60e-68 219
MS.gene52316.t1 AT4G01100 38.333 300 147 6 95 360 2 297 1.80e-66 212
MS.gene52316.t1 AT4G01100 30.457 197 116 4 87 262 97 293 3.48e-17 81.6
MS.gene52316.t1 AT4G32400 37.234 282 166 4 81 357 110 385 1.73e-51 176
MS.gene52316.t1 AT3G53940 35.216 301 170 6 78 358 66 361 7.26e-50 171
MS.gene52316.t1 AT3G53940 32.836 201 115 6 170 354 62 258 1.73e-23 100
MS.gene52316.t1 AT3G55640 34.219 301 167 9 77 354 30 322 5.16e-46 160
MS.gene52316.t1 AT3G55640 31.500 200 121 6 170 355 27 224 1.55e-22 97.1
MS.gene52316.t1 AT3G55640 34.219 301 167 9 77 354 30 322 5.16e-46 160
MS.gene52316.t1 AT3G55640 31.500 200 121 6 170 355 27 224 1.55e-22 97.1
MS.gene52316.t1 AT4G26180 33.784 296 166 6 85 357 21 309 1.18e-45 159
MS.gene52316.t1 AT4G26180 31.156 199 113 4 181 360 21 214 5.20e-25 103
MS.gene52316.t1 AT2G37890 31.438 299 174 7 82 357 42 332 1.28e-41 149
MS.gene52316.t1 AT2G37890 34.518 197 117 4 170 354 34 230 9.17e-27 108
MS.gene52316.t1 AT1G14560 30.662 287 164 7 96 354 38 317 1.64e-40 145
MS.gene52316.t1 AT1G14560 30.000 190 107 4 192 360 38 222 2.97e-20 90.9
MS.gene52316.t1 AT4G26180 32.734 278 157 6 85 339 21 291 6.76e-40 143
MS.gene52316.t1 AT4G26180 31.156 199 113 4 181 360 21 214 2.47e-25 103
MS.gene52316.t1 AT3G21390 30.719 306 169 7 87 351 21 324 3.21e-38 139
MS.gene52316.t1 AT3G21390 25.926 189 124 3 183 355 21 209 8.47e-20 89.4
MS.gene52316.t1 AT3G21390 30.719 306 169 7 87 351 43 346 3.33e-38 140
MS.gene52316.t1 AT3G21390 25.926 189 124 3 183 355 43 231 9.22e-20 89.7
MS.gene52316.t1 AT5G48970 29.618 314 177 7 87 358 24 335 6.35e-36 134
MS.gene52316.t1 AT5G48970 23.529 204 131 6 78 257 126 328 6.96e-12 66.2
MS.gene52316.t1 AT5G64970 32.013 303 179 8 79 360 129 425 1.33e-34 132
MS.gene52316.t1 AT5G64970 31.457 302 178 9 80 360 8 301 9.44e-34 127
MS.gene52316.t1 AT3G51870 30.403 273 161 8 96 355 102 358 1.12e-33 128
MS.gene52316.t1 AT3G51870 26.404 178 115 3 192 360 102 272 2.50e-18 85.9
MS.gene52316.t1 AT1G14560 29.197 274 155 8 96 339 38 302 1.21e-33 127
MS.gene52316.t1 AT1G14560 30.000 190 107 4 192 360 38 222 1.84e-20 90.9
MS.gene52316.t1 AT5G01500 31.022 274 158 10 96 355 130 386 6.02e-32 124
MS.gene52316.t1 AT5G01500 30.723 166 107 3 197 357 135 297 2.07e-21 95.1
MS.gene52316.t1 AT1G78180 30.693 303 183 7 79 360 122 418 3.18e-31 122
MS.gene52316.t1 AT3G53940 34.361 227 131 5 78 291 66 287 1.55e-30 118
MS.gene52316.t1 AT3G53940 32.836 201 115 6 170 354 62 258 3.34e-24 100
MS.gene52316.t1 AT5G66380 32.082 293 173 7 87 357 12 300 1.94e-30 118
MS.gene52316.t1 AT5G48970 28.947 266 162 5 118 358 1 264 2.32e-30 117
MS.gene52316.t1 AT5G48970 23.529 204 131 6 78 257 55 257 1.81e-12 67.4
MS.gene52316.t1 AT3G55640 33.766 231 129 7 77 291 30 252 1.13e-29 115
MS.gene52316.t1 AT3G55640 31.500 200 121 6 170 355 27 224 2.30e-23 97.8
MS.gene52316.t1 AT3G55640 33.766 231 129 7 77 291 30 252 1.13e-29 115
MS.gene52316.t1 AT3G55640 31.500 200 121 6 170 355 27 224 2.30e-23 97.8
MS.gene52316.t1 AT5G56450 27.922 308 183 8 80 358 29 326 6.16e-29 114
MS.gene52316.t1 AT2G47490 30.742 283 163 9 97 357 29 300 3.01e-27 109
MS.gene52316.t1 AT2G47490 30.220 182 116 5 97 270 129 307 3.78e-11 63.9
MS.gene52316.t1 AT3G20240 28.814 295 185 6 83 357 50 339 2.18e-26 108
MS.gene52316.t1 AT5G64970 30.142 282 170 8 79 339 129 404 3.32e-26 108
MS.gene52316.t1 AT5G64970 29.213 178 119 3 181 356 135 307 1.56e-12 68.6
MS.gene52316.t1 AT5G58970 29.371 286 182 5 85 355 16 296 4.66e-26 106
MS.gene52316.t1 AT1G14560 29.565 230 130 6 155 359 2 224 5.18e-26 104
MS.gene52316.t1 AT1G14560 28.372 215 119 7 71 260 15 219 4.54e-12 65.5
MS.gene52316.t1 AT1G14560 28.926 121 65 2 261 360 4 124 3.84e-11 62.8
MS.gene52316.t1 AT1G25380 31.295 278 162 10 97 353 33 302 9.35e-26 106
MS.gene52316.t1 AT1G25380 31.295 278 162 10 97 353 33 302 9.35e-26 106
MS.gene52316.t1 AT1G74240 26.299 308 191 6 82 357 33 336 3.98e-24 102
MS.gene52316.t1 AT1G74240 29.469 207 112 5 181 358 36 237 7.58e-18 84.3
MS.gene52316.t1 AT2G35800 23.611 360 253 7 1 357 465 805 7.36e-24 103
MS.gene52316.t1 AT2G35800 27.879 165 112 3 101 265 650 807 8.57e-12 67.0
MS.gene52316.t1 AT1G34065 28.014 282 172 7 82 357 79 335 3.52e-23 99.4
MS.gene52316.t1 AT1G34065 28.014 282 172 7 82 357 72 328 4.10e-23 99.0
MS.gene52316.t1 AT4G11440 26.481 287 192 6 83 359 328 605 9.35e-23 100
MS.gene52316.t1 AT4G11440 26.481 287 192 6 83 359 328 605 9.35e-23 100
MS.gene52316.t1 AT2G30160 27.931 290 182 8 82 354 39 318 2.00e-22 97.1
MS.gene52316.t1 AT2G30160 28.492 179 121 4 181 357 42 215 3.77e-16 79.0
MS.gene52316.t1 AT5G46800 27.922 308 179 7 81 357 4 299 1.60e-21 94.0
MS.gene52316.t1 AT5G46800 27.922 308 179 7 81 357 4 299 1.60e-21 94.0
MS.gene52316.t1 AT5G46800 27.922 308 179 7 81 357 4 299 1.60e-21 94.0
MS.gene52316.t1 AT4G39460 29.825 285 163 7 82 357 55 311 1.97e-21 94.0
MS.gene52316.t1 AT4G39460 29.825 285 163 7 82 357 55 311 1.97e-21 94.0
MS.gene52316.t1 AT4G39460 29.825 285 163 7 82 357 55 311 1.97e-21 94.0
MS.gene52316.t1 AT1G07030 26.736 288 185 7 82 354 37 313 1.07e-20 92.0
MS.gene52316.t1 AT1G07030 30.168 179 118 4 181 357 40 213 7.73e-18 83.6
MS.gene52316.t1 AT1G74240 25.952 289 178 6 101 357 4 288 1.08e-20 91.7
MS.gene52316.t1 AT1G74240 27.979 193 105 5 195 358 2 189 6.28e-14 72.0
MS.gene52316.t1 AT3G54110 29.930 284 171 8 91 355 21 295 3.38e-20 90.1
MS.gene52316.t1 AT1G79900 27.468 233 162 3 101 332 32 258 1.01e-19 88.6
MS.gene52316.t1 AT1G79900 32.778 180 111 4 81 257 105 277 4.49e-17 81.3
MS.gene52316.t1 AT1G14140 24.915 293 189 9 83 354 15 297 8.79e-19 86.3
MS.gene52316.t1 AT4G28390 27.368 285 174 8 85 345 83 358 9.09e-19 87.0
MS.gene52316.t1 AT4G28390 27.368 285 174 8 85 345 83 358 9.09e-19 87.0
MS.gene52316.t1 AT3G08580 27.273 286 174 8 85 345 84 360 2.70e-18 85.9
MS.gene52316.t1 AT3G08580 27.273 286 174 8 85 345 84 360 2.70e-18 85.9
MS.gene52316.t1 AT5G13490 26.804 291 169 8 85 345 88 364 7.10e-18 84.3
MS.gene52316.t1 AT5G13490 26.804 291 169 8 85 345 88 364 7.10e-18 84.3
MS.gene52316.t1 AT5G17400 27.465 284 175 9 85 345 14 289 7.74e-18 83.6
MS.gene52316.t1 AT2G39970 24.535 269 166 8 127 359 56 323 2.10e-15 76.6
MS.gene52316.t1 AT3G48850 30.876 217 140 4 86 295 72 285 2.82e-14 73.6
MS.gene52316.t1 AT4G03115 28.814 177 115 6 185 357 42 211 3.00e-14 71.6
MS.gene52316.t1 AT4G03115 28.814 177 115 6 185 357 42 211 3.49e-14 71.6
MS.gene52316.t1 AT5G42130 25.091 275 167 9 101 354 134 390 7.48e-14 72.8
MS.gene52316.t1 AT4G03115 28.249 177 116 5 185 357 42 211 1.11e-13 71.6
MS.gene52316.t1 AT4G03115 28.249 177 116 5 185 357 74 243 1.12e-13 71.6
MS.gene52316.t1 AT4G03115 24.820 278 184 7 89 354 74 338 8.93e-11 63.2
MS.gene52316.t1 AT2G17270 24.460 278 188 8 86 354 23 287 1.54e-13 70.9
MS.gene52316.t1 AT5G01340 24.756 307 181 12 77 353 9 295 1.63e-13 70.9
MS.gene52316.t1 AT4G24570 24.458 323 180 9 83 357 4 310 5.83e-13 69.3
MS.gene52316.t1 AT4G24570 26.178 191 103 4 177 331 2 190 8.71e-11 62.8
MS.gene52316.t1 AT5G19760 25.172 290 182 10 85 355 18 291 6.08e-13 68.9
MS.gene52316.t1 AT5G15640 23.490 298 207 6 83 360 19 315 1.46e-12 68.2
MS.gene52316.t1 AT4G27940 24.303 251 163 6 127 354 158 404 1.54e-12 68.6
MS.gene52316.t1 AT2G26360 24.286 280 197 6 80 357 110 376 1.76e-12 68.6
MS.gene52316.t1 AT5G15640 23.490 298 207 6 83 360 26 322 1.97e-12 67.8
MS.gene52316.t1 AT2G33820 24.834 302 197 10 82 360 15 309 4.73e-12 66.6
MS.gene52316.t1 AT5G14040 31.527 203 127 5 101 295 98 296 9.23e-12 66.2
MS.gene52316.t1 AT2G22500 26.667 315 167 10 88 355 9 306 5.01e-11 63.5
MS.gene52316.t1 AT2G33820 24.272 309 198 10 82 360 15 317 6.61e-11 63.2

Find 108 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAACATTTACCATTATT+TGG 0.152309 7.3:+24119042 MS.gene52316:CDS
GAACCCTTTCAAAAGATATA+TGG 0.194643 7.3:+24119548 MS.gene52316:CDS
CGAGTCTATGAAGAAAAGTT+TGG 0.270413 7.3:+24120128 MS.gene52316:CDS
TATGAAGAAAAGTTTGGATT+TGG 0.278604 7.3:+24120134 MS.gene52316:CDS
CCATTCCTTTATAAGAGCTT+TGG 0.292662 7.3:-24119993 None:intergenic
CTGCTGGCTGGTGGTATAGC+TGG 0.297668 7.3:+24119433 MS.gene52316:CDS
GGAGAGGAAAAGGCTGATAT+TGG 0.305280 7.3:+24119397 MS.gene52316:CDS
TTAGGATGTGGCACGGTATC+AGG 0.308353 7.3:+24119813 MS.gene52316:CDS
TTCAAAAGATATATGGGTTC+AGG 0.315307 7.3:+24119555 MS.gene52316:CDS
AACATGTGTTTACCCATTAC+AGG 0.319704 7.3:+24119848 MS.gene52316:CDS
CCTAAGTCCTTCATGTTTCA+AGG 0.325260 7.3:-24120034 None:intergenic
TTATGCGAGCACTTGTTGTT+TGG 0.340534 7.3:-24119225 None:intergenic
TGCATATCCGCTCCAAATAA+TGG 0.343042 7.3:-24119054 None:intergenic
CATTCCTTTATAAGAGCTTT+GGG 0.349436 7.3:-24119992 None:intergenic
TGGAGGTATGGGGCGGCTGC+TGG 0.349854 7.3:+24119417 MS.gene52316:CDS
GGGACAACTTTGAGCAAGTT+GGG 0.350182 7.3:-24120078 None:intergenic
CGGATATGCATGGTCGATAT+CGG 0.355218 7.3:+24119067 MS.gene52316:CDS
GATTGATTCCTTCTATTGTT+GGG 0.357527 7.3:+24119602 MS.gene52316:CDS
GGATTGATTCCTTCTATTGT+TGG 0.358185 7.3:+24119601 MS.gene52316:CDS
CCTGGCCCTCTGGTACAATT+AGG 0.359826 7.3:+24119795 MS.gene52316:CDS
AACCCTTTCAAAAGATATAT+GGG 0.382815 7.3:+24119549 MS.gene52316:CDS
TGGAAAGAAGGTGGTTTAGT+AGG 0.387807 7.3:+24119268 MS.gene52316:CDS
TTTCGTCGAGCGTGTTGATA+AGG 0.392137 7.3:+24118949 MS.gene52316:CDS
GGTATGGGGCGGCTGCTGGC+TGG 0.393611 7.3:+24119421 MS.gene52316:CDS
GGATATGCATGGTCGATATC+GGG 0.394180 7.3:+24119068 MS.gene52316:CDS
CAATGGCTTAAATGTTCTTA+AGG 0.402824 7.3:+24119303 MS.gene52316:CDS
GGGATAATCCCAACAATAGA+AGG 0.403405 7.3:-24119610 None:intergenic
TAAAATCTAATGGCACTCTC+AGG 0.406499 7.3:-24119331 None:intergenic
CTCATAGGTATAAAATCTAA+TGG 0.412822 7.3:-24119341 None:intergenic
CTTGAAACATGAAGGACTTA+GGG 0.419814 7.3:+24120035 MS.gene52316:CDS
CCTTGAAACATGAAGGACTT+AGG 0.419955 7.3:+24120034 MS.gene52316:CDS
TTCTATAGAACCTGGCCCTC+TGG 0.424026 7.3:+24119785 MS.gene52316:intron
GTTGGGATTATCCCGTATGC+TGG 0.424477 7.3:+24119619 MS.gene52316:CDS
GCATATAGGTATCTTATTGC+AGG 0.428990 7.3:+24119133 MS.gene52316:CDS
CTTGTTCTGATGACCTGTAA+TGG 0.431515 7.3:-24119861 None:intergenic
CAGGCCCAAAGCTCTTATAA+AGG 0.447267 7.3:+24119988 MS.gene52316:CDS
GAAGGTCTTCATCATCTCAT+AGG 0.451692 7.3:-24119356 None:intergenic
TAATGGTGTTATAACATTTG+AGG 0.460039 7.3:+24118976 MS.gene52316:CDS
TGGGACAACTTTGAGCAAGT+TGG 0.461450 7.3:-24120079 None:intergenic
AGCTTCTGATTTCAGAATGC+AGG 0.461737 7.3:+24119969 MS.gene52316:intron
CTTATTGCAGGAGGAGTGGC+AGG 0.466803 7.3:+24119145 MS.gene52316:CDS
TTGTTCTGATGACCTGTAAT+GGG 0.470988 7.3:-24119860 None:intergenic
TGCGATATATCCTATGGATC+TGG 0.473939 7.3:+24119471 MS.gene52316:CDS
AAAGGCTGATATTGGAGGTA+TGG 0.476181 7.3:+24119405 MS.gene52316:CDS
TGCACCTCTCGACCGTCTAA+AGG 0.491875 7.3:+24119189 MS.gene52316:CDS
GGCACGGTATCAGGAGCTCT+TGG 0.493434 7.3:+24119822 MS.gene52316:CDS
TGCTAAAGGAGGAGAGGAAA+AGG 0.498282 7.3:+24119387 MS.gene52316:CDS
AGTGGAAAAGTTCCTAGCCT+TGG 0.500076 7.3:+24119526 MS.gene52316:CDS
AAGGCTGATATTGGAGGTAT+GGG 0.501323 7.3:+24119406 MS.gene52316:CDS
CCTAATTGTACCAGAGGGCC+AGG 0.502635 7.3:-24119795 None:intergenic
AGCTGCTTATGAAACCTTGA+AGG 0.503268 7.3:+24119651 MS.gene52316:CDS
GAGGAAAAGGCTGATATTGG+AGG 0.503465 7.3:+24119400 MS.gene52316:CDS
TTTGAAAGGGTTCCAAGGCT+AGG 0.511922 7.3:-24119538 None:intergenic
GTGTTATAACATTTGAGGAA+TGG 0.514699 7.3:+24118981 MS.gene52316:CDS
AGGGATTAAAATTGATGATG+AGG 0.515030 7.3:+24118916 MS.gene52316:CDS
ACCTTCATTGTGGATGCTAA+AGG 0.516847 7.3:+24119373 MS.gene52316:CDS
TCCTTTAGCATCCACAATGA+AGG 0.516899 7.3:-24119374 None:intergenic
ATCAGCAAGTATCACTTACA+TGG 0.532377 7.3:+24120101 MS.gene52316:CDS
TTATAACATTTGAGGAATGG+AGG 0.534313 7.3:+24118984 MS.gene52316:CDS
AAAATCTAATGGCACTCTCA+GGG 0.534392 7.3:-24119330 None:intergenic
TCAAACTGCGATATATCCTA+TGG 0.537455 7.3:+24119465 MS.gene52316:CDS
ATGGGGCGGCTGCTGGCTGG+TGG 0.539699 7.3:+24119424 MS.gene52316:CDS
GCTAGATCTATCCCAGCATA+CGG 0.541835 7.3:-24119631 None:intergenic
CGTGTTGATAAGGATCATAA+TGG 0.546342 7.3:+24118959 MS.gene52316:CDS
TTGGGATTATCCCGTATGCT+GGG 0.549952 7.3:+24119620 MS.gene52316:CDS
CCAAAGCTCTTATAAAGGAA+TGG 0.555117 7.3:+24119993 MS.gene52316:CDS
ACTGTTATTCCCGCAGGTGT+TGG 0.556455 7.3:+24119097 MS.gene52316:CDS
CAAACATATACTCATGCAAG+TGG 0.564888 7.3:+24119508 MS.gene52316:CDS
ACATGCTTACCAACACCTGC+GGG 0.566513 7.3:-24119106 None:intergenic
TATAACATTTGAGGAATGGA+GGG 0.568763 7.3:+24118985 MS.gene52316:CDS
AAAACTCTTTGGAAAGAAGG+TGG 0.573548 7.3:+24119259 MS.gene52316:CDS
ATGGGTTCAGGAAGGACCCC+GGG 0.576157 7.3:+24119567 MS.gene52316:CDS
CGTGTCTTAACCAGATCCAT+AGG 0.577244 7.3:-24119481 None:intergenic
TCTGCTGCTTTATCCTCATG+AGG 0.578499 7.3:+24119012 MS.gene52316:CDS
GTAAGCATGTTCATGCATAT+AGG 0.586205 7.3:+24119119 MS.gene52316:CDS
GATATGCATGGTCGATATCG+GGG 0.597937 7.3:+24119069 MS.gene52316:CDS
TTATTTGGAGCGGATATGCA+TGG 0.601766 7.3:+24119057 MS.gene52316:CDS
TTCTCAATAGTTGCCTCATG+AGG 0.605430 7.3:-24119025 None:intergenic
GAGTGGCAGGTGCTGCATCA+CGG 0.607001 7.3:+24119158 MS.gene52316:CDS
GTATCTTATTGCAGGAGGAG+TGG 0.608780 7.3:+24119141 MS.gene52316:CDS
GGACAACTTTGAGCAAGTTG+GGG 0.611992 7.3:-24120077 None:intergenic
CCTCTGGTACAATTAGGATG+TGG 0.612093 7.3:+24119801 MS.gene52316:CDS
TGGCTTAAATGTTCTTAAGG+TGG 0.612520 7.3:+24119306 MS.gene52316:CDS
CTAGATCTATCCCAGCATAC+GGG 0.613432 7.3:-24119630 None:intergenic
CCACATCCTAATTGTACCAG+AGG 0.614325 7.3:-24119801 None:intergenic
TATGGGTTCAGGAAGGACCC+CGG 0.617617 7.3:+24119566 MS.gene52316:CDS
AAGTATATTATTCAGGAAGG+AGG 0.622341 7.3:+24119685 MS.gene52316:CDS
GAACATACTGTTATTCCCGC+AGG 0.623642 7.3:+24119091 MS.gene52316:CDS
CATTACAGGTCATCAGAACA+AGG 0.624270 7.3:+24119862 MS.gene52316:CDS
CTTGCAATACAACCTTTAGA+CGG 0.625650 7.3:-24119201 None:intergenic
ACATTTACCATTATTTGGAG+CGG 0.628260 7.3:+24119047 MS.gene52316:CDS
TTGAAACATGAAGGACTTAG+GGG 0.634830 7.3:+24120036 MS.gene52316:CDS
AACATGCTTACCAACACCTG+CGG 0.635492 7.3:-24119107 None:intergenic
AAATGAGCTTTATGATTGAG+TGG 0.639871 7.3:+24118374 None:intergenic
GGACTTAGGGGATTCTACAA+AGG 0.641653 7.3:+24120048 MS.gene52316:CDS
TGTGGATGCTAAAGGAGGAG+AGG 0.642716 7.3:+24119381 MS.gene52316:CDS
TTCATTGTGGATGCTAAAGG+AGG 0.644411 7.3:+24119376 MS.gene52316:CDS
ATGTAAGTGATACTTGCTGA+TGG 0.648725 7.3:-24120099 None:intergenic
TATAGGTATCTTATTGCAGG+AGG 0.651279 7.3:+24119136 MS.gene52316:CDS
CACATCCTAATTGTACCAGA+GGG 0.660119 7.3:-24119800 None:intergenic
AAAGATATATGGGTTCAGGA+AGG 0.664054 7.3:+24119559 MS.gene52316:CDS
TGTAAGTGATACTTGCTGAT+GGG 0.680342 7.3:-24120098 None:intergenic
GATGATGAAGACCTTCATTG+TGG 0.683051 7.3:+24119363 MS.gene52316:CDS
ACAACCTTTAGACGGTCGAG+AGG 0.683942 7.3:-24119193 None:intergenic
CTGATATTGGAGGTATGGGG+CGG 0.684136 7.3:+24119410 MS.gene52316:CDS
AAATCTAATGGCACTCTCAG+GGG 0.691447 7.3:-24119329 None:intergenic
GGTACAATTAGGATGTGGCA+CGG 0.692724 7.3:+24119806 MS.gene52316:CDS
AGGCTGATATTGGAGGTATG+GGG 0.704416 7.3:+24119407 MS.gene52316:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATCAAACAATA+AGG - chr7.3:24118663-24118682 None:intergenic 10.0%
!! AATCAAAATTAGAAATCAAA+TGG - chr7.3:24118774-24118793 None:intergenic 15.0%
!! ATCAAAATTAGAAATCAAAT+GGG - chr7.3:24118773-24118792 None:intergenic 15.0%
!! TTAAAAGAACCTATAAAAAC+AGG - chr7.3:24118560-24118579 None:intergenic 20.0%
!! TTTGATTAAAAAAATCACTC+TGG + chr7.3:24118668-24118687 MS.gene52316:intron 20.0%
!!! AAAAAGTATATTATTCAGGA+AGG + chr7.3:24119682-24119701 MS.gene52316:CDS 20.0%
!!! ACTTATTTGTTTGTTATCTT+CGG + chr7.3:24119720-24119739 MS.gene52316:intron 20.0%
!!! TTCCTGAATAATATACTTTT+TGG - chr7.3:24119683-24119702 None:intergenic 20.0%
! AACCCTTTCAAAAGATATAT+GGG + chr7.3:24119549-24119568 MS.gene52316:CDS 25.0%
! CTCATAGGTATAAAATCTAA+TGG - chr7.3:24119344-24119363 None:intergenic 25.0%
! TATGAAGAAAAGTTTGGATT+TGG + chr7.3:24120134-24120153 MS.gene52316:CDS 25.0%
! TGAGAACATTTACCATTATT+TGG + chr7.3:24119042-24119061 MS.gene52316:CDS 25.0%
!! AAAACAACGTAGACATTTTA+TGG - chr7.3:24119898-24119917 None:intergenic 25.0%
!! GTCCAAAAAGTATATTATTC+AGG + chr7.3:24119678-24119697 MS.gene52316:CDS 25.0%
!! TTATGATGTGCTTTTATAGT+TGG + chr7.3:24118859-24118878 MS.gene52316:intron 25.0%
!!! AACCCATATATCTTTTGAAA+GGG - chr7.3:24119554-24119573 None:intergenic 25.0%
!!! AGTAACTTACCTGTTTTTAT+AGG + chr7.3:24118548-24118567 MS.gene52316:intron 25.0%
!!! TAATGGTGTTATAACATTTG+AGG + chr7.3:24118976-24118995 MS.gene52316:CDS 25.0%
AAATGTTGAAGTTGGATGTA+AGG + chr7.3:24118796-24118815 MS.gene52316:intron 30.0%
AAGTATATTATTCAGGAAGG+AGG + chr7.3:24119685-24119704 MS.gene52316:CDS 30.0%
ACATTTACCATTATTTGGAG+CGG + chr7.3:24119047-24119066 MS.gene52316:CDS 30.0%
AGAAAAACCTTGAAACATGA+AGG + chr7.3:24120027-24120046 MS.gene52316:CDS 30.0%
CAATGGCTTAAATGTTCTTA+AGG + chr7.3:24119303-24119322 MS.gene52316:CDS 30.0%
CATTCCTTTATAAGAGCTTT+GGG - chr7.3:24119995-24120014 None:intergenic 30.0%
GAACCCTTTCAAAAGATATA+TGG + chr7.3:24119548-24119567 MS.gene52316:CDS 30.0%
GAATTTAAACACACAACTGA+AGG - chr7.3:24119758-24119777 None:intergenic 30.0%
GTGTTATAACATTTGAGGAA+TGG + chr7.3:24118981-24119000 MS.gene52316:CDS 30.0%
TAAGTTGTCGATCGTTAATT+CGG - chr7.3:24118739-24118758 None:intergenic 30.0%
TACATAAATTGCCTCTTAAC+AGG - chr7.3:24118431-24118450 None:intergenic 30.0%
TATAACATTTGAGGAATGGA+GGG + chr7.3:24118985-24119004 MS.gene52316:CDS 30.0%
TTATAACATTTGAGGAATGG+AGG + chr7.3:24118984-24119003 MS.gene52316:CDS 30.0%
TTCAAAAGATATATGGGTTC+AGG + chr7.3:24119555-24119574 MS.gene52316:CDS 30.0%
TTGATTGCAAATGTTGAAGT+TGG + chr7.3:24118788-24118807 MS.gene52316:intron 30.0%
! GAACCCATATATCTTTTGAA+AGG - chr7.3:24119555-24119574 None:intergenic 30.0%
! GATTGATTCCTTCTATTGTT+GGG + chr7.3:24119602-24119621 MS.gene52316:CDS 30.0%
! GGTGAGATTATTACACATTT+TGG + chr7.3:24118395-24118414 MS.gene52316:intron 30.0%
! GTAAAAACTCTTTGGAAAGA+AGG + chr7.3:24119256-24119275 MS.gene52316:CDS 30.0%
!! AGGGATTAAAATTGATGATG+AGG + chr7.3:24118916-24118935 MS.gene52316:CDS 30.0%
AAAATCTAATGGCACTCTCA+GGG - chr7.3:24119333-24119352 None:intergenic 35.0%
AAAGATATATGGGTTCAGGA+AGG + chr7.3:24119559-24119578 MS.gene52316:CDS 35.0%
AACATGTGTTTACCCATTAC+AGG + chr7.3:24119848-24119867 MS.gene52316:CDS 35.0%
AAGTTGTCGATCGTTAATTC+GGG - chr7.3:24118738-24118757 None:intergenic 35.0%
ATCAGCAAGTATCACTTACA+TGG + chr7.3:24120101-24120120 MS.gene52316:CDS 35.0%
CAAACATATACTCATGCAAG+TGG + chr7.3:24119508-24119527 MS.gene52316:CDS 35.0%
CAGCACACGTGAAAATAAAA+TGG - chr7.3:24118706-24118725 None:intergenic 35.0%
CCAAAGCTCTTATAAAGGAA+TGG + chr7.3:24119993-24120012 MS.gene52316:CDS 35.0%
CCATTCCTTTATAAGAGCTT+TGG - chr7.3:24119996-24120015 None:intergenic 35.0%
CGAGTCTATGAAGAAAAGTT+TGG + chr7.3:24120128-24120147 MS.gene52316:CDS 35.0%
CTTGAAACATGAAGGACTTA+GGG + chr7.3:24120035-24120054 MS.gene52316:CDS 35.0%
CTTGCAATACAACCTTTAGA+CGG - chr7.3:24119204-24119223 None:intergenic 35.0%
GCATATAGGTATCTTATTGC+AGG + chr7.3:24119133-24119152 MS.gene52316:CDS 35.0%
GGTAAGTTACTTAGTCGATT+AGG - chr7.3:24118539-24118558 None:intergenic 35.0%
GTAAGCATGTTCATGCATAT+AGG + chr7.3:24119119-24119138 MS.gene52316:CDS 35.0%
TAAAATCTAATGGCACTCTC+AGG - chr7.3:24119334-24119353 None:intergenic 35.0%
TAAATTGCCTCTTAACAGGA+AGG - chr7.3:24118427-24118446 None:intergenic 35.0%
TATAGGTATCTTATTGCAGG+AGG + chr7.3:24119136-24119155 MS.gene52316:CDS 35.0%
TCAAACTGCGATATATCCTA+TGG + chr7.3:24119465-24119484 MS.gene52316:CDS 35.0%
TGGCTTAAATGTTCTTAAGG+TGG + chr7.3:24119306-24119325 MS.gene52316:CDS 35.0%
TTGAAACATGAAGGACTTAG+GGG + chr7.3:24120036-24120055 MS.gene52316:CDS 35.0%
TTGTTCTGATGACCTGTAAT+GGG - chr7.3:24119863-24119882 None:intergenic 35.0%
! AAAACTCTTTGGAAAGAAGG+TGG + chr7.3:24119259-24119278 MS.gene52316:CDS 35.0%
! ATGTAAGTGATACTTGCTGA+TGG - chr7.3:24120102-24120121 None:intergenic 35.0%
! CGTGTTGATAAGGATCATAA+TGG + chr7.3:24118959-24118978 MS.gene52316:CDS 35.0%
! GGATTGATTCCTTCTATTGT+TGG + chr7.3:24119601-24119620 MS.gene52316:CDS 35.0%
! TGTAAGTGATACTTGCTGAT+GGG - chr7.3:24120101-24120120 None:intergenic 35.0%
! TTCCAAAGAGTTTTTACTGC+AGG - chr7.3:24119253-24119272 None:intergenic 35.0%
!! TATCTTTTGAAAGGGTTCCA+AGG - chr7.3:24119546-24119565 None:intergenic 35.0%
!! TGTTTGTTATCTTCGGTATC+AGG + chr7.3:24119727-24119746 MS.gene52316:intron 35.0%
!!! GGTTTAGTAGGATTTTTTCG+AGG + chr7.3:24119280-24119299 MS.gene52316:CDS 35.0%
AAAGGCTGATATTGGAGGTA+TGG + chr7.3:24119405-24119424 MS.gene52316:CDS 40.0%
AAATCTAATGGCACTCTCAG+GGG - chr7.3:24119332-24119351 None:intergenic 40.0%
AATCCCTGAAAAAGAGAGAC+TGG - chr7.3:24118903-24118922 None:intergenic 40.0%
ACCTTCATTGTGGATGCTAA+AGG + chr7.3:24119373-24119392 MS.gene52316:CDS 40.0%
AGCTGCTTATGAAACCTTGA+AGG + chr7.3:24119651-24119670 MS.gene52316:CDS 40.0%
AGCTTCTGATTTCAGAATGC+AGG + chr7.3:24119969-24119988 MS.gene52316:intron 40.0%
CACATCCTAATTGTACCAGA+GGG - chr7.3:24119803-24119822 None:intergenic 40.0%
CATTACAGGTCATCAGAACA+AGG + chr7.3:24119862-24119881 MS.gene52316:CDS 40.0%
CCTAAGTCCTTCATGTTTCA+AGG - chr7.3:24120037-24120056 None:intergenic 40.0%
CCTTGAAACATGAAGGACTT+AGG + chr7.3:24120034-24120053 MS.gene52316:CDS 40.0%
CGTAGAAAGTTGAAGGGAAA+GGG + chr7.3:24118474-24118493 MS.gene52316:intron 40.0%
CTGCATCGTAGAAAGTTGAA+GGG + chr7.3:24118468-24118487 MS.gene52316:intron 40.0%
CTTGTTCTGATGACCTGTAA+TGG - chr7.3:24119864-24119883 None:intergenic 40.0%
GAAGGTCTTCATCATCTCAT+AGG - chr7.3:24119359-24119378 None:intergenic 40.0%
GATGATGAAGACCTTCATTG+TGG + chr7.3:24119363-24119382 MS.gene52316:CDS 40.0%
GCATATTCCTTCCTGTTAAG+AGG + chr7.3:24118417-24118436 MS.gene52316:intron 40.0%
GGGATAATCCCAACAATAGA+AGG - chr7.3:24119613-24119632 None:intergenic 40.0%
GTCGATTAGGCTACATGAAA+AGG - chr7.3:24118526-24118545 None:intergenic 40.0%
TCAATCCCCTATAAAAAGCC+CGG - chr7.3:24119588-24119607 None:intergenic 40.0%
TCCTTTAGCATCCACAATGA+AGG - chr7.3:24119377-24119396 None:intergenic 40.0%
TCGTAGAAAGTTGAAGGGAA+AGG + chr7.3:24118473-24118492 MS.gene52316:intron 40.0%
TGCATATCCGCTCCAAATAA+TGG - chr7.3:24119057-24119076 None:intergenic 40.0%
TGCCTGCAGTAAAAACTCTT+TGG + chr7.3:24119248-24119267 MS.gene52316:CDS 40.0%
TGCGATATATCCTATGGATC+TGG + chr7.3:24119471-24119490 MS.gene52316:CDS 40.0%
TGGAAAGAAGGTGGTTTAGT+AGG + chr7.3:24119268-24119287 MS.gene52316:CDS 40.0%
TTCATTGTGGATGCTAAAGG+AGG + chr7.3:24119376-24119395 MS.gene52316:CDS 40.0%
TTCTCAATAGTTGCCTCATG+AGG - chr7.3:24119028-24119047 None:intergenic 40.0%
! AAGGCTGATATTGGAGGTAT+GGG + chr7.3:24119406-24119425 MS.gene52316:CDS 40.0%
! CTGCGATTTTCTATAGAACC+TGG + chr7.3:24119777-24119796 MS.gene52316:intron 40.0%
! CTTTTTGGACATCTCCTTCA+AGG - chr7.3:24119668-24119687 None:intergenic 40.0%
! TTATTTGGAGCGGATATGCA+TGG + chr7.3:24119057-24119076 MS.gene52316:CDS 40.0%
!! ACACCAGTCTCTCTTTTTCA+GGG + chr7.3:24118897-24118916 MS.gene52316:intron 40.0%
!! TTATGCGAGCACTTGTTGTT+TGG - chr7.3:24119228-24119247 None:intergenic 40.0%
!!! GTAGGATTTTTTCGAGGCAA+TGG + chr7.3:24119286-24119305 MS.gene52316:CDS 40.0%
AACATGCTTACCAACACCTG+CGG - chr7.3:24119110-24119129 None:intergenic 45.0%
AATCCCCTATAAAAAGCCCG+GGG - chr7.3:24119586-24119605 None:intergenic 45.0%
AGTGGAAAAGTTCCTAGCCT+TGG + chr7.3:24119526-24119545 MS.gene52316:CDS 45.0%
CAATCCCCTATAAAAAGCCC+GGG - chr7.3:24119587-24119606 None:intergenic 45.0%
CAGGCCCAAAGCTCTTATAA+AGG + chr7.3:24119988-24120007 MS.gene52316:CDS 45.0%
CCACATCCTAATTGTACCAG+AGG - chr7.3:24119804-24119823 None:intergenic 45.0%
CCTCTGGTACAATTAGGATG+TGG + chr7.3:24119801-24119820 MS.gene52316:CDS 45.0%
CGGATATGCATGGTCGATAT+CGG + chr7.3:24119067-24119086 MS.gene52316:CDS 45.0%
CGTGTCTTAACCAGATCCAT+AGG - chr7.3:24119484-24119503 None:intergenic 45.0%
CTAGATCTATCCCAGCATAC+GGG - chr7.3:24119633-24119652 None:intergenic 45.0%
CTGAAAAAGAGAGACTGGTG+TGG - chr7.3:24118898-24118917 None:intergenic 45.0%
GAACATACTGTTATTCCCGC+AGG + chr7.3:24119091-24119110 MS.gene52316:CDS 45.0%
GAGGAAAAGGCTGATATTGG+AGG + chr7.3:24119400-24119419 MS.gene52316:CDS 45.0%
GATATGCATGGTCGATATCG+GGG + chr7.3:24119069-24119088 MS.gene52316:CDS 45.0%
GCTAGATCTATCCCAGCATA+CGG - chr7.3:24119634-24119653 None:intergenic 45.0%
GCTGCATCGTAGAAAGTTGA+AGG + chr7.3:24118467-24118486 MS.gene52316:intron 45.0%
GGACAACTTTGAGCAAGTTG+GGG - chr7.3:24120080-24120099 None:intergenic 45.0%
GGACTTAGGGGATTCTACAA+AGG + chr7.3:24120048-24120067 MS.gene52316:CDS 45.0%
GGAGAGGAAAAGGCTGATAT+TGG + chr7.3:24119397-24119416 MS.gene52316:CDS 45.0%
GGATATGCATGGTCGATATC+GGG + chr7.3:24119068-24119087 MS.gene52316:CDS 45.0%
GGGACAACTTTGAGCAAGTT+GGG - chr7.3:24120081-24120100 None:intergenic 45.0%
GGTACAATTAGGATGTGGCA+CGG + chr7.3:24119806-24119825 MS.gene52316:CDS 45.0%
GTATCTTATTGCAGGAGGAG+TGG + chr7.3:24119141-24119160 MS.gene52316:CDS 45.0%
TCAACTTTCTACGATGCAGC+AGG - chr7.3:24118467-24118486 None:intergenic 45.0%
TGCTAAAGGAGGAGAGGAAA+AGG + chr7.3:24119387-24119406 MS.gene52316:CDS 45.0%
TGGGACAACTTTGAGCAAGT+TGG - chr7.3:24120082-24120101 None:intergenic 45.0%
TTGGGATTATCCCGTATGCT+GGG + chr7.3:24119620-24119639 MS.gene52316:CDS 45.0%
TTTGAAAGGGTTCCAAGGCT+AGG - chr7.3:24119541-24119560 None:intergenic 45.0%
! AGGCTGATATTGGAGGTATG+GGG + chr7.3:24119407-24119426 MS.gene52316:CDS 45.0%
! CACACCAGTCTCTCTTTTTC+AGG + chr7.3:24118896-24118915 MS.gene52316:intron 45.0%
! TTTCGTCGAGCGTGTTGATA+AGG + chr7.3:24118949-24118968 MS.gene52316:CDS 45.0%
!! TCTGCTGCTTTATCCTCATG+AGG + chr7.3:24119012-24119031 MS.gene52316:CDS 45.0%
ACAACCTTTAGACGGTCGAG+AGG - chr7.3:24119196-24119215 None:intergenic 50.0%
ACATGCTTACCAACACCTGC+GGG - chr7.3:24119109-24119128 None:intergenic 50.0%
ACTGTTATTCCCGCAGGTGT+TGG + chr7.3:24119097-24119116 MS.gene52316:CDS 50.0%
GTTGGGATTATCCCGTATGC+TGG + chr7.3:24119619-24119638 MS.gene52316:CDS 50.0%
TGTGGATGCTAAAGGAGGAG+AGG + chr7.3:24119381-24119400 MS.gene52316:CDS 50.0%
TTAGGATGTGGCACGGTATC+AGG + chr7.3:24119813-24119832 MS.gene52316:CDS 50.0%
TTCTATAGAACCTGGCCCTC+TGG + chr7.3:24119785-24119804 MS.gene52316:intron 50.0%
! AAGGACCCCGGGCTTTTTAT+AGG + chr7.3:24119578-24119597 MS.gene52316:CDS 50.0%
! AGGACCCCGGGCTTTTTATA+GGG + chr7.3:24119579-24119598 MS.gene52316:CDS 50.0%
! CTGATATTGGAGGTATGGGG+CGG + chr7.3:24119410-24119429 MS.gene52316:CDS 50.0%
CCTAATTGTACCAGAGGGCC+AGG - chr7.3:24119798-24119817 None:intergenic 55.0%
CCTGGCCCTCTGGTACAATT+AGG + chr7.3:24119795-24119814 MS.gene52316:CDS 55.0%
CTTATTGCAGGAGGAGTGGC+AGG + chr7.3:24119145-24119164 MS.gene52316:CDS 55.0%
TATGGGTTCAGGAAGGACCC+CGG + chr7.3:24119566-24119585 MS.gene52316:CDS 55.0%
TGCACCTCTCGACCGTCTAA+AGG + chr7.3:24119189-24119208 MS.gene52316:CDS 55.0%
! GGACCCCGGGCTTTTTATAG+GGG + chr7.3:24119580-24119599 MS.gene52316:CDS 55.0%
ATGGGTTCAGGAAGGACCCC+GGG + chr7.3:24119567-24119586 MS.gene52316:CDS 60.0%
GGCACGGTATCAGGAGCTCT+TGG + chr7.3:24119822-24119841 MS.gene52316:CDS 60.0%
! CTGCTGGCTGGTGGTATAGC+TGG + chr7.3:24119433-24119452 MS.gene52316:CDS 60.0%
! GAGTGGCAGGTGCTGCATCA+CGG + chr7.3:24119158-24119177 MS.gene52316:CDS 60.0%
! TGGAGGTATGGGGCGGCTGC+TGG + chr7.3:24119417-24119436 MS.gene52316:CDS 70.0%
GGTATGGGGCGGCTGCTGGC+TGG + chr7.3:24119421-24119440 MS.gene52316:CDS 75.0%
! ATGGGGCGGCTGCTGGCTGG+TGG + chr7.3:24119424-24119443 MS.gene52316:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 24118385 24120161 24118385 ID=MS.gene52316
chr7.3 mRNA 24118385 24120161 24118385 ID=MS.gene52316.t1;Parent=MS.gene52316
chr7.3 exon 24118385 24118395 24118385 ID=MS.gene52316.t1.exon1;Parent=MS.gene52316.t1
chr7.3 CDS 24118385 24118395 24118385 ID=cds.MS.gene52316.t1;Parent=MS.gene52316.t1
chr7.3 exon 24118904 24119706 24118904 ID=MS.gene52316.t1.exon2;Parent=MS.gene52316.t1
chr7.3 CDS 24118904 24119706 24118904 ID=cds.MS.gene52316.t1;Parent=MS.gene52316.t1
chr7.3 exon 24119793 24119883 24119793 ID=MS.gene52316.t1.exon3;Parent=MS.gene52316.t1
chr7.3 CDS 24119793 24119883 24119793 ID=cds.MS.gene52316.t1;Parent=MS.gene52316.t1
chr7.3 exon 24119984 24120161 24119984 ID=MS.gene52316.t1.exon4;Parent=MS.gene52316.t1
chr7.3 CDS 24119984 24120161 24119984 ID=cds.MS.gene52316.t1;Parent=MS.gene52316.t1
Gene Sequence

>MS.gene52316

ATGATTGAGTGGTGAGATTATTACACATTTTGGCATATTCCTTCCTGTTAAGAGGCAATTTATGTATAAAATTTGCTTACCTGCTGCATCGTAGAAAGTTGAAGGGAAAGGGAGAAAGAAAATCATCTGTTAAAGCAACCTTTTCATGTAGCCTAATCGACTAAGTAACTTACCTGTTTTTATAGGTTCTTTTAATCTGTAGTCGTATTCATAACTAAGCACTGTCATGACATTTTTCAATTGCTCTATGAAACTTTACTTTGAAATCAATCTATCCTTATTGTTTGATTAAAAAAATCACTCTGGTAGTCTAGTTTGCCATTTTATTTTCACGTGTGCTGAATTAACGTCCCGAATTAACGATCGACAACTTACACAAAATAAGCCCATTTGATTTCTAATTTTGATTGCAAATGTTGAAGTTGGATGTAAGGTATCTAATTTATTTAGTGTATTCTTGCTACATAATTTATTTTATGATGTGCTTTTATAGTTGGTTCATTCTATAAACCACACCAGTCTCTCTTTTTCAGGGATTAAAATTGATGATGAGGAACTTGCTCATTTCGTCGAGCGTGTTGATAAGGATCATAATGGTGTTATAACATTTGAGGAATGGAGGGATTTTCTGCTGCTTTATCCTCATGAGGCAACTATTGAGAACATTTACCATTATTTGGAGCGGATATGCATGGTCGATATCGGGGAACATACTGTTATTCCCGCAGGTGTTGGTAAGCATGTTCATGCATATAGGTATCTTATTGCAGGAGGAGTGGCAGGTGCTGCATCACGGACAGCAACTGCACCTCTCGACCGTCTAAAGGTTGTATTGCAAGTCCAAACAACAAGTGCTCGCATAATGCCTGCAGTAAAAACTCTTTGGAAAGAAGGTGGTTTAGTAGGATTTTTTCGAGGCAATGGCTTAAATGTTCTTAAGGTGGCCCCTGAGAGTGCCATTAGATTTTATACCTATGAGATGATGAAGACCTTCATTGTGGATGCTAAAGGAGGAGAGGAAAAGGCTGATATTGGAGGTATGGGGCGGCTGCTGGCTGGTGGTATAGCTGGTGCTGTAGCTCAAACTGCGATATATCCTATGGATCTGGTTAAGACACGACTACAAACATATACTCATGCAAGTGGAAAAGTTCCTAGCCTTGGAACCCTTTCAAAAGATATATGGGTTCAGGAAGGACCCCGGGCTTTTTATAGGGGATTGATTCCTTCTATTGTTGGGATTATCCCGTATGCTGGGATAGATCTAGCTGCTTATGAAACCTTGAAGGAGATGTCCAAAAAGTATATTATTCAGGAAGGAGGTAAAAACAATAAACTTATTTGTTTGTTATCTTCGGTATCAGGTATTGCCTTCAGTTGTGTGTTTAAATTCTGCGATTTTCTATAGAACCTGGCCCTCTGGTACAATTAGGATGTGGCACGGTATCAGGAGCTCTTGGAGCAACATGTGTTTACCCATTACAGGTCATCAGAACAAGGTAAGTTTTTGCCATAAAATGTCTACGTTGTTTTTTAAACATCTATCTTACATTTTTGCTATCTATCGAAAATAGAATGTAAAACAGCTTCTGATTTCAGAATGCAGGCCCAAAGCTCTTATAAAGGAATGGCAGATGTGTTCAGAAAAACCTTGAAACATGAAGGACTTAGGGGATTCTACAAAGGAATATTCCCCAACTTGCTCAAAGTTGTCCCATCAGCAAGTATCACTTACATGGTTTACGAGTCTATGAAGAAAAGTTTGGATTTGGAGTGA
Protein sequence

>MS.gene52316.t1

MIECLSFSGIKIDDEELAHFVERVDKDHNGVITFEEWRDFLLLYPHEATIENIYHYLERICMVDIGEHTVIPAGVGKHVHAYRYLIAGGVAGAASRTATAPLDRLKVVLQVQTTSARIMPAVKTLWKEGGLVGFFRGNGLNVLKVAPESAIRFYTYEMMKTFIVDAKGGEEKADIGGMGRLLAGGIAGAVAQTAIYPMDLVKTRLQTYTHASGKVPSLGTLSKDIWVQEGPRAFYRGLIPSIVGIIPYAGIDLAAYETLKEMSKKYIIQEGEPGPLVQLGCGTVSGALGATCVYPLQVIRTRMQAQSSYKGMADVFRKTLKHEGLRGFYKGIFPNLLKVVPSASITYMVYESMKKSLDLE