Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52945.t1 | XP_013468735.1 | 98.4 | 630 | 10 | 0 | 1 | 630 | 1 | 630 | 0.00E+00 | 1273.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52945.t1 | Q96524 | 64.6 | 630 | 192 | 7 | 5 | 628 | 6 | 610 | 1.5e-235 | 817.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52945.t1 | A0A072VLR3 | 98.4 | 630 | 10 | 0 | 1 | 630 | 1 | 630 | 0.0e+00 | 1273.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05016 | MS.gene52945 | 0.801109 | 1.05E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52945.t1 | MTR_1g076190 | 98.571 | 630 | 9 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1288 |
| MS.gene52945.t1 | MTR_1g076190 | 98.567 | 628 | 9 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1284 |
| MS.gene52945.t1 | MTR_1g043190 | 76.910 | 602 | 132 | 6 | 4 | 601 | 2 | 600 | 0.0 | 937 |
| MS.gene52945.t1 | MTR_5g063920 | 55.719 | 612 | 244 | 7 | 2 | 596 | 5 | 606 | 0.0 | 696 |
| MS.gene52945.t1 | MTR_5g063920 | 55.719 | 612 | 244 | 7 | 2 | 596 | 5 | 606 | 0.0 | 696 |
| MS.gene52945.t1 | MTR_5g063920 | 54.018 | 448 | 182 | 5 | 165 | 596 | 3 | 442 | 9.53e-165 | 481 |
| MS.gene52945.t1 | MTR_4g011370 | 28.731 | 536 | 334 | 19 | 1 | 510 | 11 | 524 | 3.12e-51 | 186 |
| MS.gene52945.t1 | MTR_4g011370 | 28.717 | 491 | 306 | 17 | 1 | 466 | 11 | 482 | 3.10e-48 | 176 |
| MS.gene52945.t1 | MTR_4g011370 | 27.466 | 517 | 306 | 19 | 1 | 493 | 11 | 482 | 3.17e-43 | 163 |
| MS.gene52945.t1 | MTR_3g108700 | 28.163 | 490 | 278 | 18 | 2 | 446 | 94 | 554 | 3.64e-28 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52945.t1 | AT1G04400 | 69.340 | 561 | 159 | 4 | 5 | 562 | 6 | 556 | 0.0 | 808 |
| MS.gene52945.t1 | AT1G04400 | 69.340 | 561 | 159 | 4 | 5 | 562 | 6 | 556 | 0.0 | 808 |
| MS.gene52945.t1 | AT4G08920 | 59.555 | 539 | 207 | 5 | 7 | 536 | 15 | 551 | 0.0 | 667 |
| MS.gene52945.t1 | AT3G15620 | 29.735 | 528 | 315 | 17 | 6 | 501 | 26 | 529 | 3.95e-53 | 191 |
| MS.gene52945.t1 | AT5G24850 | 30.105 | 475 | 270 | 20 | 2 | 444 | 82 | 526 | 4.77e-34 | 137 |
| MS.gene52945.t1 | AT3G15620 | 29.009 | 424 | 249 | 15 | 6 | 397 | 26 | 429 | 7.38e-32 | 129 |
Find 153 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGCTTTAACAGAATTTA+TGG | 0.120110 | 1.1:+56960899 | MS.gene52945:CDS |
| TAAAATTGTCCTTCCTCTTT+AGG | 0.172518 | 1.1:-56959702 | None:intergenic |
| TCAGAAAGTGCCGGCATTTC+AGG | 0.176635 | 1.1:+56962798 | MS.gene52945:CDS |
| GCCATATCTATATCAATTAT+TGG | 0.201692 | 1.1:-56962604 | None:intergenic |
| TGCCTTACATATTCTCCTTC+TGG | 0.214099 | 1.1:-56962469 | None:intergenic |
| AATGGGGAATGAAGTATTTC+TGG | 0.219485 | 1.1:+56961369 | MS.gene52945:CDS |
| AATTTCCCACATCTTGAATA+TGG | 0.234109 | 1.1:-56962647 | None:intergenic |
| CTGTATTCCCTGTGTTTATA+TGG | 0.246769 | 1.1:+56959676 | MS.gene52945:CDS |
| CTAATAGGTAGTTCATTCTT+AGG | 0.252046 | 1.1:-56962823 | None:intergenic |
| CCTCATCTTCAAATCTAAAA+TGG | 0.261221 | 1.1:+56963022 | MS.gene52945:CDS |
| GTATTTCTGGGACACGCTTT+TGG | 0.272715 | 1.1:+56961382 | MS.gene52945:CDS |
| GAACCATTGTTTGGTTTAGA+AGG | 0.277961 | 1.1:+56959601 | MS.gene52945:CDS |
| ACTCATGAGAGAGCACTTCT+TGG | 0.306648 | 1.1:+56961164 | MS.gene52945:CDS |
| TCCTTAAGGAGGACAACTTT+TGG | 0.310889 | 1.1:-56962742 | None:intergenic |
| CTAAGAATGAACTACCTATT+AGG | 0.318143 | 1.1:+56962824 | MS.gene52945:CDS |
| AAATGTTCAATAGAGGATTT+AGG | 0.326416 | 1.1:+56960801 | MS.gene52945:CDS |
| CAAGCAGCATCAAAAGCTTC+TGG | 0.339324 | 1.1:+56962670 | MS.gene52945:CDS |
| CTCCAAGTCTTGAAGTTTGA+CGG | 0.343433 | 1.1:-56961218 | None:intergenic |
| TTATCAGTGAAAAGCTATAA+TGG | 0.349616 | 1.1:+56960378 | MS.gene52945:CDS |
| TGTTGCTTCTACCTTGGAAA+TGG | 0.350799 | 1.1:+56961351 | MS.gene52945:CDS |
| TGCAAGCATCTCTGCCAAAA+AGG | 0.354280 | 1.1:-56960465 | None:intergenic |
| TATCAGTGAAAAGCTATAAT+GGG | 0.356330 | 1.1:+56960379 | MS.gene52945:CDS |
| CTGTAGAGCAAGTGTCTTCA+TGG | 0.357346 | 1.1:-56962933 | None:intergenic |
| CTGGATTGTCCTCAATTCTA+AGG | 0.360401 | 1.1:-56959626 | None:intergenic |
| TCCAAAAGTTGTCCTCCTTA+AGG | 0.363395 | 1.1:+56962741 | MS.gene52945:CDS |
| CTCTTAGTCCAATTGCTCTA+AGG | 0.366113 | 1.1:-56961106 | None:intergenic |
| GTTGCTTCTACCTTGGAAAT+GGG | 0.372170 | 1.1:+56961352 | MS.gene52945:CDS |
| CACCACCTTGAAACTCTTCC+TGG | 0.373919 | 1.1:-56959726 | None:intergenic |
| TCCAATAATTGATATAGATA+TGG | 0.381151 | 1.1:+56962603 | MS.gene52945:CDS |
| AAACCAAGCAACGCGTTACT+AGG | 0.385656 | 1.1:+56960843 | MS.gene52945:CDS |
| TGCAGGAATGAGAGAACTTT+GGG | 0.399544 | 1.1:+56961271 | MS.gene52945:CDS |
| TCTATATCAATTATTGGATT+CGG | 0.400812 | 1.1:-56962598 | None:intergenic |
| GTTGTGTTTAACCATCTCTA+TGG | 0.405567 | 1.1:+56959876 | MS.gene52945:CDS |
| TTATCCCCGTATCTCCATTT+CGG | 0.407052 | 1.1:+56960984 | MS.gene52945:CDS |
| TGGTCTCGAACCAGTGAAAC+AGG | 0.407880 | 1.1:-56960324 | None:intergenic |
| CTCATTCCTGCATCAACTAA+AGG | 0.411661 | 1.1:-56961260 | None:intergenic |
| CGTCCTAGTAACGCGTTGCT+TGG | 0.415085 | 1.1:-56960846 | None:intergenic |
| CGCTCAAGCTCGTGACCGTC+TGG | 0.421155 | 1.1:-56961458 | None:intergenic |
| ATGAGAGAACTTTGGGCTAC+AGG | 0.422513 | 1.1:+56961278 | MS.gene52945:CDS |
| CTTAGTGTGCTTAGAGCATC+AGG | 0.428735 | 1.1:+56962553 | MS.gene52945:CDS |
| ACAGACATGGAGCAAAGCTC+AGG | 0.431235 | 1.1:+56963060 | MS.gene52945:CDS |
| CAAGGTGGAATAAGCGAAAC+AGG | 0.434780 | 1.1:-56960501 | None:intergenic |
| TTTATCAGATCCTGTTTCAC+TGG | 0.435781 | 1.1:+56960314 | MS.gene52945:intron |
| GTAGCAATAGAACCATTGTT+TGG | 0.440981 | 1.1:+56959592 | MS.gene52945:CDS |
| CAGCACTAGCTGCTGCTGCT+AGG | 0.442114 | 1.1:+56959646 | MS.gene52945:CDS |
| ATGCAGGAATGAGAGAACTT+TGG | 0.446720 | 1.1:+56961270 | MS.gene52945:CDS |
| TCTTGAATATGGCTTGAGTC+AGG | 0.448589 | 1.1:-56962636 | None:intergenic |
| CTAGCAGCAGCAGCTAGTGC+TGG | 0.448793 | 1.1:-56959645 | None:intergenic |
| TGAAAATGTTGCTTCTACCT+TGG | 0.450718 | 1.1:+56961345 | MS.gene52945:CDS |
| TCTCGAACCAAGTGATTTCA+AGG | 0.453164 | 1.1:-56959781 | None:intergenic |
| TCACACTCAACTCTCCGAAA+TGG | 0.453446 | 1.1:-56960998 | None:intergenic |
| ACTATCTTTCACATGATTCA+CGG | 0.453888 | 1.1:-56962893 | None:intergenic |
| TTGAAACTATAACTCTGATT+CGG | 0.455014 | 1.1:-56961313 | None:intergenic |
| GGCTACCCTTTAGTTGATGC+AGG | 0.466577 | 1.1:+56961254 | MS.gene52945:CDS |
| TCATTCCTGCATCAACTAAA+GGG | 0.470820 | 1.1:-56961259 | None:intergenic |
| CTGAGTGGATCCATCATCCT+TGG | 0.471071 | 1.1:+56962521 | MS.gene52945:CDS |
| AGCACTAGCTGCTGCTGCTA+GGG | 0.473785 | 1.1:+56959647 | MS.gene52945:CDS |
| GAGATGCTTGCACAAGCAAA+TGG | 0.474718 | 1.1:+56960476 | MS.gene52945:CDS |
| CGGTCACGAGCTTGAGCGCT+TGG | 0.474915 | 1.1:+56961463 | MS.gene52945:CDS |
| TAGAAGGGACCTTAGAATTG+AGG | 0.477865 | 1.1:+56959617 | MS.gene52945:CDS |
| AACTCTCCGAAATGGAGATA+CGG | 0.477912 | 1.1:-56960990 | None:intergenic |
| CTCGGCTGGCAGTATATCTC+AGG | 0.480304 | 1.1:+56961428 | MS.gene52945:CDS |
| CTAGCTGCTGCTGCTAGGGA+TGG | 0.482748 | 1.1:+56959651 | MS.gene52945:CDS |
| AAAGAAAAGCTAGTGGAACT+TGG | 0.484127 | 1.1:+56960354 | MS.gene52945:CDS |
| ATCCGTCAAACTTCAAGACT+TGG | 0.488443 | 1.1:+56961216 | MS.gene52945:CDS |
| AGTCAAGAAATGTTCAATAG+AGG | 0.489309 | 1.1:+56960794 | MS.gene52945:CDS |
| CTAGGACGAGCATGGTCTCC+AGG | 0.489522 | 1.1:+56960861 | MS.gene52945:CDS |
| ACTCTCCGAAATGGAGATAC+GGG | 0.489556 | 1.1:-56960989 | None:intergenic |
| TTCTTAGGATCCTGAAATGC+CGG | 0.490558 | 1.1:-56962808 | None:intergenic |
| ATCCAGAAGGAGAATATGTA+AGG | 0.496224 | 1.1:+56962467 | MS.gene52945:CDS |
| GATCAGTCCTTGAAATCACT+TGG | 0.496518 | 1.1:+56959774 | MS.gene52945:CDS |
| TACTTCACTACTCCAAGAAT+AGG | 0.498999 | 1.1:+56960931 | MS.gene52945:CDS |
| GAGTACTCTCAATGCTCTCT+TGG | 0.499541 | 1.1:+56959824 | MS.gene52945:CDS |
| GGATCTGTTGTATGAGCCTT+GGG | 0.500509 | 1.1:+56960401 | MS.gene52945:CDS |
| TTTATCCAGGAAGAGTTTCA+AGG | 0.505143 | 1.1:+56959721 | MS.gene52945:CDS |
| TTGTCAGCATTGCTCCAACC+TGG | 0.505947 | 1.1:-56960879 | None:intergenic |
| AACCATTGTTTGGTTTAGAA+GGG | 0.509245 | 1.1:+56959602 | MS.gene52945:CDS |
| TGAAGAGAAGAGAAAGAACA+AGG | 0.511587 | 1.1:+56962864 | MS.gene52945:CDS |
| CTACTCCAAGAATAGGCAAA+AGG | 0.511893 | 1.1:+56960938 | MS.gene52945:CDS |
| AGCCGAGGATATCACATTCA+AGG | 0.517876 | 1.1:-56961412 | None:intergenic |
| AGCTTCTGGCTCTGAAGCAA+GGG | 0.519234 | 1.1:+56962684 | MS.gene52945:CDS |
| ATGTCTGTCTGTTCATGCCA+TGG | 0.522186 | 1.1:-56963045 | None:intergenic |
| ATGGGGAATGAAGTATTTCT+GGG | 0.522424 | 1.1:+56961370 | MS.gene52945:CDS |
| GAAGCAGTCTTTAGTTCACT+TGG | 0.523042 | 1.1:+56959752 | MS.gene52945:CDS |
| AAGCTTCTGGCTCTGAAGCA+AGG | 0.524562 | 1.1:+56962683 | MS.gene52945:CDS |
| CAGGAAGAGTTTCAAGGTGG+TGG | 0.530377 | 1.1:+56959727 | MS.gene52945:CDS |
| GAGCAAAGCTCAGGGAAAGA+TGG | 0.532049 | 1.1:+56963069 | MS.gene52945:CDS |
| TTGTGGAACAGAAAATGAAT+AGG | 0.538477 | 1.1:-56962992 | None:intergenic |
| TCGCATAAAGCAGATATTGT+GGG | 0.539284 | 1.1:+56961040 | MS.gene52945:CDS |
| GGGATCTGTTGTATGAGCCT+TGG | 0.542320 | 1.1:+56960400 | MS.gene52945:CDS |
| CTCAAGCCATATTCAAGATG+TGG | 0.544153 | 1.1:+56962641 | MS.gene52945:CDS |
| AAGAATAGGCAAAAGGTTGG+TGG | 0.546393 | 1.1:+56960945 | MS.gene52945:CDS |
| GACGAGCATGGTCTCCAGGT+TGG | 0.548035 | 1.1:+56960865 | MS.gene52945:CDS |
| GTTGGCATTCTCGCCAACTC+AGG | 0.548803 | 1.1:-56962499 | None:intergenic |
| GTGGTGCATTCCAAGGATGA+TGG | 0.551180 | 1.1:-56962531 | None:intergenic |
| AAGGCAATGGCTACCTGAGT+TGG | 0.551193 | 1.1:+56962486 | MS.gene52945:CDS |
| TTGAATGTGATATCCTCGGC+TGG | 0.555532 | 1.1:+56961414 | MS.gene52945:CDS |
| AGGTTGGAGCAATGCTGACA+AGG | 0.556873 | 1.1:+56960881 | MS.gene52945:CDS |
| CTTCAAATCTAAAATGGCCA+TGG | 0.558284 | 1.1:+56963028 | MS.gene52945:CDS |
| TTGGGAAGTATATGATGAGA+AGG | 0.559387 | 1.1:+56960419 | MS.gene52945:CDS |
| ACTTGGAGACAAGGTAGGAC+TGG | 0.559715 | 1.1:+56961233 | MS.gene52945:CDS |
| TACTTCATTCCCCATTTCCA+AGG | 0.559892 | 1.1:-56961362 | None:intergenic |
| AGAGCATCAGGAGTCGAGCT+AGG | 0.561014 | 1.1:+56962565 | MS.gene52945:CDS |
| TTCTCATCATATACTTCCCA+AGG | 0.561654 | 1.1:-56960417 | None:intergenic |
| TGAGCGCTTGGATGATCCTG+AGG | 0.562126 | 1.1:+56961475 | MS.gene52945:CDS |
| TTAATGTGCATACCTTCAGC+AGG | 0.564087 | 1.1:-56960534 | None:intergenic |
| GGATCTAGGTTTGATCCAGA+AGG | 0.564228 | 1.1:+56962454 | MS.gene52945:CDS |
| CTGTTTCGCTTATTCCACCT+TGG | 0.564355 | 1.1:+56960502 | MS.gene52945:CDS |
| GTTTATATGGTGTCCTAAAG+AGG | 0.569764 | 1.1:+56959689 | MS.gene52945:CDS |
| ACACTAAGTGGTGCATTCCA+AGG | 0.571610 | 1.1:-56962538 | None:intergenic |
| TGGCAATTAATTCCTGCTGA+AGG | 0.571990 | 1.1:+56960522 | MS.gene52945:CDS |
| TTGCTTCTACCTTGGAAATG+GGG | 0.574156 | 1.1:+56961353 | MS.gene52945:CDS |
| GACCTTGAATGTGATATCCT+CGG | 0.577392 | 1.1:+56961410 | MS.gene52945:CDS |
| AGCTAATGATCAGAAAGTGC+CGG | 0.577971 | 1.1:+56962789 | MS.gene52945:CDS |
| CTCGCATAAAGCAGATATTG+TGG | 0.579056 | 1.1:+56961039 | MS.gene52945:CDS |
| TCAAGCCATATTCAAGATGT+GGG | 0.581508 | 1.1:+56962642 | MS.gene52945:CDS |
| GAAGATGAGGAACATTGTTG+TGG | 0.582759 | 1.1:-56963009 | None:intergenic |
| AAGGAGAATATGTAAGGCAA+TGG | 0.584996 | 1.1:+56962473 | MS.gene52945:CDS |
| CAGATATTGTGGGGAAACGA+AGG | 0.585311 | 1.1:+56961050 | MS.gene52945:CDS |
| GAGAACTTTGGGCTACAGGA+TGG | 0.589010 | 1.1:+56961282 | MS.gene52945:CDS |
| GGATGATGGATCCACTCAGT+TGG | 0.589489 | 1.1:-56962517 | None:intergenic |
| TCCAAGAATAGGCAAAAGGT+TGG | 0.591255 | 1.1:+56960942 | MS.gene52945:CDS |
| AGTGCTCTCTCATGAGTGAA+CGG | 0.592898 | 1.1:-56961158 | None:intergenic |
| GATGCTCTAAGCACACTAAG+TGG | 0.600085 | 1.1:-56962550 | None:intergenic |
| GGAAACGAAGGCAACAGTGT+TGG | 0.600244 | 1.1:+56961062 | MS.gene52945:CDS |
| CTGAGATATACTGCCAGCCG+AGG | 0.601742 | 1.1:-56961427 | None:intergenic |
| TTTGACGGATCAGCATTCCA+AGG | 0.608296 | 1.1:-56961203 | None:intergenic |
| TCAAGACTTGGAGACAAGGT+AGG | 0.609400 | 1.1:+56961228 | MS.gene52945:CDS |
| TCAGCAGGAATTAATTGCCA+AGG | 0.610860 | 1.1:-56960519 | None:intergenic |
| TTTCATGCAGGGGCGACAGG+AGG | 0.611889 | 1.1:+56963395 | MS.gene52945:intron |
| ATATGGTGTCCTAAAGAGGA+AGG | 0.616143 | 1.1:+56959693 | MS.gene52945:CDS |
| TTAGGACACCATATAAACAC+AGG | 0.616586 | 1.1:-56959684 | None:intergenic |
| CAGACATGGAGCAAAGCTCA+GGG | 0.619340 | 1.1:+56963061 | MS.gene52945:CDS |
| TTGACGGATCAGCATTCCAA+GGG | 0.619378 | 1.1:-56961202 | None:intergenic |
| AACTTCAAGACTTGGAGACA+AGG | 0.622090 | 1.1:+56961224 | MS.gene52945:CDS |
| CGCATAAAGCAGATATTGTG+GGG | 0.626353 | 1.1:+56961041 | MS.gene52945:CDS |
| AGCACTACTTACCATAGAGA+TGG | 0.626546 | 1.1:-56959887 | None:intergenic |
| CAACATCAAAGAAAAGCTAG+TGG | 0.627181 | 1.1:+56960347 | MS.gene52945:CDS |
| ATCTCAGGATGCTTACCAGA+CGG | 0.628095 | 1.1:+56961443 | MS.gene52945:CDS |
| ATCAGTGAAAAGCTATAATG+GGG | 0.635939 | 1.1:+56960380 | MS.gene52945:CDS |
| GTCCCTTCTAAACCAAACAA+TGG | 0.637331 | 1.1:-56959604 | None:intergenic |
| ACGCGTTACTAGGACGAGCA+TGG | 0.642349 | 1.1:+56960853 | MS.gene52945:CDS |
| GCAGGAATTAATTGCCAAGG+TGG | 0.644364 | 1.1:-56960516 | None:intergenic |
| TTAGCTGAAATAGTAGCAGA+CGG | 0.651586 | 1.1:-56962772 | None:intergenic |
| TGGGAAGTATATGATGAGAA+GGG | 0.652926 | 1.1:+56960420 | MS.gene52945:CDS |
| TGGCGAGAATGCCAACTGAG+TGG | 0.660213 | 1.1:+56962506 | MS.gene52945:CDS |
| ATTTCGGAGAGTTGAGTGTG+AGG | 0.666895 | 1.1:+56961000 | MS.gene52945:CDS |
| ATGGCATGAACAGACAGACA+TGG | 0.671080 | 1.1:+56963047 | MS.gene52945:CDS |
| CTCTCCGAAATGGAGATACG+GGG | 0.691586 | 1.1:-56960988 | None:intergenic |
| ATCCAGGAAGAGTTTCAAGG+TGG | 0.698355 | 1.1:+56959724 | MS.gene52945:CDS |
| ATACGGGGATAACAGCGAGG+TGG | 0.704873 | 1.1:-56960973 | None:intergenic |
| TAGGACACCATATAAACACA+GGG | 0.720737 | 1.1:-56959683 | None:intergenic |
| GAGATACGGGGATAACAGCG+AGG | 0.744456 | 1.1:-56960976 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTTATAACATATATTAAAA+TGG | - | chr1.1:56962136-56962155 | None:intergenic | 15.0% |
| !! | TGAATAAATTATTGAATACA+GGG | - | chr1.1:56961553-56961572 | None:intergenic | 15.0% |
| !! | TTGAATAAATTATTGAATAC+AGG | - | chr1.1:56961554-56961573 | None:intergenic | 15.0% |
| !!! | TTCATTTATAGTATAGTTTT+TGG | + | chr1.1:56960573-56960592 | MS.gene52945:intron | 15.0% |
| !! | TAAAATTTCAAAGTACAAAC+TGG | - | chr1.1:56961858-56961877 | None:intergenic | 20.0% |
| !! | TCCAATAATTGATATAGATA+TGG | + | chr1.1:56962603-56962622 | MS.gene52945:CDS | 20.0% |
| !! | TCTATATCAATTATTGGATT+CGG | - | chr1.1:56962601-56962620 | None:intergenic | 20.0% |
| !!! | ATCCTTAGGTTTATTTTTTT+AGG | + | chr1.1:56963212-56963231 | MS.gene52945:intron | 20.0% |
| !!! | TAGATAATAGCTTTTATATC+TGG | + | chr1.1:56961731-56961750 | MS.gene52945:intron | 20.0% |
| !!! | TATAGGAAACAAGTTTTATT+AGG | + | chr1.1:56962334-56962353 | MS.gene52945:intron | 20.0% |
| !!! | TCCTTAGGTTTATTTTTTTA+GGG | + | chr1.1:56963213-56963232 | MS.gene52945:intron | 20.0% |
| !!! | TTTGGTTACACTTAATATTT+TGG | + | chr1.1:56959986-56960005 | MS.gene52945:intron | 20.0% |
| !!! | TTTTTCTATTAGTAACATAG+AGG | + | chr1.1:56960038-56960057 | MS.gene52945:intron | 20.0% |
| ! | AAATGTTCAATAGAGGATTT+AGG | + | chr1.1:56960801-56960820 | MS.gene52945:CDS | 25.0% |
| ! | ATAAATTATTGAATACAGGG+TGG | - | chr1.1:56961550-56961569 | None:intergenic | 25.0% |
| ! | ATCAACTGCATAAATTTATC+TGG | + | chr1.1:56961695-56961714 | MS.gene52945:intron | 25.0% |
| ! | ATGTTACTAATAGAAAAAGC+CGG | - | chr1.1:56960036-56960055 | None:intergenic | 25.0% |
| ! | CAAATTAGATATTTAACGAG+CGG | - | chr1.1:56961786-56961805 | None:intergenic | 25.0% |
| ! | GATAAATTTATGCAGTTGAT+TGG | - | chr1.1:56961695-56961714 | None:intergenic | 25.0% |
| ! | GCCATATCTATATCAATTAT+TGG | - | chr1.1:56962607-56962626 | None:intergenic | 25.0% |
| ! | TAAGTTCGTTTATTCAAACA+GGG | - | chr1.1:56962028-56962047 | None:intergenic | 25.0% |
| ! | TATCAGTGAAAAGCTATAAT+GGG | + | chr1.1:56960379-56960398 | MS.gene52945:CDS | 25.0% |
| ! | TCCCTAAAAAAATAAACCTA+AGG | - | chr1.1:56963217-56963236 | None:intergenic | 25.0% |
| ! | TTATCAGTGAAAAGCTATAA+TGG | + | chr1.1:56960378-56960397 | MS.gene52945:CDS | 25.0% |
| ! | TTGAAACTATAACTCTGATT+CGG | - | chr1.1:56961316-56961335 | None:intergenic | 25.0% |
| ! | TTGCTGTATCATAATAACTA+TGG | - | chr1.1:56960737-56960756 | None:intergenic | 25.0% |
| !! | AAAAGATGATACTTTCGTTT+TGG | - | chr1.1:56960700-56960719 | None:intergenic | 25.0% |
| !! | AAGAATTTTCATTTTCATGC+AGG | + | chr1.1:56963383-56963402 | MS.gene52945:intron | 25.0% |
| !! | AGAATTTTCATTTTCATGCA+GGG | + | chr1.1:56963384-56963403 | MS.gene52945:intron | 25.0% |
| !!! | GATTTGATTTGATTCATGTT+TGG | + | chr1.1:56959968-56959987 | MS.gene52945:intron | 25.0% |
| !!! | GGTATTACTTTTTCGTATAT+AGG | + | chr1.1:56962317-56962336 | MS.gene52945:intron | 25.0% |
| !!! | TATAGTTTTTGGTTCTACAT+TGG | + | chr1.1:56960584-56960603 | MS.gene52945:intron | 25.0% |
| !!! | TTGCTTTTAACACAGATTAT+TGG | + | chr1.1:56961803-56961822 | MS.gene52945:intron | 25.0% |
| AAACTATCTTGGAGATCTTA+TGG | + | chr1.1:56962165-56962184 | MS.gene52945:intron | 30.0% | |
| AAGTAATACCAATCTCACTT+AGG | - | chr1.1:56962307-56962326 | None:intergenic | 30.0% | |
| AATTTCCCACATCTTGAATA+TGG | - | chr1.1:56962650-56962669 | None:intergenic | 30.0% | |
| ACAATCATGGTACAAAATGT+TGG | - | chr1.1:56960294-56960313 | None:intergenic | 30.0% | |
| ACCTAAGGATTAAATTGTCT+CGG | - | chr1.1:56963202-56963221 | None:intergenic | 30.0% | |
| ACTATCTTTCACATGATTCA+CGG | - | chr1.1:56962896-56962915 | None:intergenic | 30.0% | |
| AGGATCTGATAAAACAATCA+TGG | - | chr1.1:56960307-56960326 | None:intergenic | 30.0% | |
| AGTAAGTTAGTAGTTGTGTT+GGG | - | chr1.1:56960664-56960683 | None:intergenic | 30.0% | |
| AGTAATACCAATCTCACTTA+GGG | - | chr1.1:56962306-56962325 | None:intergenic | 30.0% | |
| AGTCAAGAAATGTTCAATAG+AGG | + | chr1.1:56960794-56960813 | MS.gene52945:CDS | 30.0% | |
| ATCACTGTGTTTCATAATGA+GGG | + | chr1.1:56963307-56963326 | MS.gene52945:intron | 30.0% | |
| ATCAGTGAAAAGCTATAATG+GGG | + | chr1.1:56960380-56960399 | MS.gene52945:CDS | 30.0% | |
| CAACTATTATAGTCATGCTA+AGG | - | chr1.1:56961968-56961987 | None:intergenic | 30.0% | |
| CCTCATCTTCAAATCTAAAA+TGG | + | chr1.1:56963022-56963041 | MS.gene52945:CDS | 30.0% | |
| CTAAGAATGAACTACCTATT+AGG | + | chr1.1:56962824-56962843 | MS.gene52945:CDS | 30.0% | |
| CTAATAGGTAGTTCATTCTT+AGG | - | chr1.1:56962826-56962845 | None:intergenic | 30.0% | |
| GAACTGTAAAGAAACATATC+AGG | - | chr1.1:56960255-56960274 | None:intergenic | 30.0% | |
| GTAAAATGCTGGATTCTTAT+TGG | + | chr1.1:56960131-56960150 | MS.gene52945:intron | 30.0% | |
| GTAAGTTCGTTTATTCAAAC+AGG | - | chr1.1:56962029-56962048 | None:intergenic | 30.0% | |
| TAAAATTGTCCTTCCTCTTT+AGG | - | chr1.1:56959705-56959724 | None:intergenic | 30.0% | |
| TAGTAAGTTAGTAGTTGTGT+TGG | - | chr1.1:56960665-56960684 | None:intergenic | 30.0% | |
| TTGTGGAACAGAAAATGAAT+AGG | - | chr1.1:56962995-56963014 | None:intergenic | 30.0% | |
| ! | AAAGAGTGAAGACTCATTTT+AGG | - | chr1.1:56963267-56963286 | None:intergenic | 30.0% |
| ! | AACCATTGTTTGGTTTAGAA+GGG | + | chr1.1:56959602-56959621 | MS.gene52945:CDS | 30.0% |
| ! | AAGAGTGAAGACTCATTTTA+GGG | - | chr1.1:56963120-56963101 | None:intergenic | 30.0% |
| ! | AATGAACAGATAACAGCTTT+TGG | + | chr1.1:56962189-56962208 | MS.gene52945:intron | 30.0% |
| ! | AGATTGTTTGGGATAGATTT+CGG | - | chr1.1:56962233-56962252 | None:intergenic | 30.0% |
| ! | CAAGGCTTTAACAGAATTTA+TGG | + | chr1.1:56960899-56960918 | MS.gene52945:CDS | 30.0% |
| ! | CATTTTGTTCTCTTCCTAAT+AGG | - | chr1.1:56962841-56962860 | None:intergenic | 30.0% |
| ! | CCATTTTAGATTTGAAGATG+AGG | - | chr1.1:56963025-56963044 | None:intergenic | 30.0% |
| ! | GAATTTTCATTTTCATGCAG+GGG | + | chr1.1:56963385-56963404 | MS.gene52945:intron | 30.0% |
| ! | TAGCGTGATTTCTCTAATTT+TGG | + | chr1.1:56962408-56962427 | MS.gene52945:intron | 30.0% |
| ! | TCATTGTTTGTCCAGATTTT+AGG | + | chr1.1:56962433-56962452 | MS.gene52945:intron | 30.0% |
| !! | AGTTACTTCTATTTTTCTCG+TGG | - | chr1.1:56963157-56963176 | None:intergenic | 30.0% |
| !! | ATGATACTTTCGTTTTGGAT+AGG | - | chr1.1:56960695-56960714 | None:intergenic | 30.0% |
| !! | GCTATTTTCGTAAACTATCT+TGG | + | chr1.1:56962154-56962173 | MS.gene52945:intron | 30.0% |
| !! | GTTTTATTAGGTTTGTTCGT+TGG | + | chr1.1:56962346-56962365 | MS.gene52945:intron | 30.0% |
| !! | TGTGAGGAAAGTTTTTCAAA+TGG | + | chr1.1:56961016-56961035 | MS.gene52945:CDS | 30.0% |
| !!! | CACTCTTTTTTACACTTTGT+TGG | + | chr1.1:56963340-56963359 | MS.gene52945:intron | 30.0% |
| AAAAATTGGCACATGAGGAT+GGG | - | chr1.1:56961652-56961671 | None:intergenic | 35.0% | |
| AAAGAAAAGCTAGTGGAACT+TGG | + | chr1.1:56960354-56960373 | MS.gene52945:CDS | 35.0% | |
| AAGCACTTGTGAGATTGTTT+GGG | - | chr1.1:56962244-56962263 | None:intergenic | 35.0% | |
| AAGGAGAATATGTAAGGCAA+TGG | + | chr1.1:56962473-56962492 | MS.gene52945:CDS | 35.0% | |
| ACCGAGACAATTTAATCCTT+AGG | + | chr1.1:56963198-56963217 | MS.gene52945:intron | 35.0% | |
| AGTTATGTGTGGCAAAATGA+AGG | - | chr1.1:56960111-56960130 | None:intergenic | 35.0% | |
| ATCCAGAAGGAGAATATGTA+AGG | + | chr1.1:56962467-56962486 | MS.gene52945:CDS | 35.0% | |
| ATCTCAAAAATTGGCACATG+AGG | - | chr1.1:56961657-56961676 | None:intergenic | 35.0% | |
| CAAAAGTTGAAGAATCAAGC+CGG | + | chr1.1:56960014-56960033 | MS.gene52945:intron | 35.0% | |
| CAAACCTAGATCCTAAAATC+TGG | - | chr1.1:56962447-56962466 | None:intergenic | 35.0% | |
| CAACATCAAAGAAAAGCTAG+TGG | + | chr1.1:56960347-56960366 | MS.gene52945:CDS | 35.0% | |
| CACACATAACTGTAAAATGC+TGG | + | chr1.1:56960120-56960139 | MS.gene52945:intron | 35.0% | |
| CATCACTGTGTTTCATAATG+AGG | + | chr1.1:56963306-56963325 | MS.gene52945:intron | 35.0% | |
| CTGTATTCCCTGTGTTTATA+TGG | + | chr1.1:56959676-56959695 | MS.gene52945:CDS | 35.0% | |
| GCGGTGAAGTTTAATATGAA+AGG | - | chr1.1:56961767-56961786 | None:intergenic | 35.0% | |
| GTAGCAATAGAACCATTGTT+TGG | + | chr1.1:56959592-56959611 | MS.gene52945:CDS | 35.0% | |
| GTTATGTGTGGCAAAATGAA+GGG | - | chr1.1:56960110-56960129 | None:intergenic | 35.0% | |
| GTTGTGTTTAACCATCTCTA+TGG | + | chr1.1:56959876-56959895 | MS.gene52945:CDS | 35.0% | |
| GTTTATATGGTGTCCTAAAG+AGG | + | chr1.1:56959689-56959708 | MS.gene52945:CDS | 35.0% | |
| TAAGCACTTGTGAGATTGTT+TGG | - | chr1.1:56962245-56962264 | None:intergenic | 35.0% | |
| TACTTCACTACTCCAAGAAT+AGG | + | chr1.1:56960931-56960950 | MS.gene52945:CDS | 35.0% | |
| TAGGACACCATATAAACACA+GGG | - | chr1.1:56959686-56959705 | None:intergenic | 35.0% | |
| TCAAGCCATATTCAAGATGT+GGG | + | chr1.1:56962642-56962661 | MS.gene52945:CDS | 35.0% | |
| TCATTCCTGCATCAACTAAA+GGG | - | chr1.1:56961262-56961281 | None:intergenic | 35.0% | |
| TCGCATAAAGCAGATATTGT+GGG | + | chr1.1:56961040-56961059 | MS.gene52945:CDS | 35.0% | |
| TCTTCACTCTTTACCATCAT+AGG | + | chr1.1:56963275-56963294 | MS.gene52945:intron | 35.0% | |
| TGAAGAGAAGAGAAAGAACA+AGG | + | chr1.1:56962864-56962883 | MS.gene52945:CDS | 35.0% | |
| TGATGTAGAAAGTCCTATGA+TGG | - | chr1.1:56963291-56963310 | None:intergenic | 35.0% | |
| TTAGCTGAAATAGTAGCAGA+CGG | - | chr1.1:56962775-56962794 | None:intergenic | 35.0% | |
| TTAGGACACCATATAAACAC+AGG | - | chr1.1:56959687-56959706 | None:intergenic | 35.0% | |
| TTCTCATCATATACTTCCCA+AGG | - | chr1.1:56960420-56960439 | None:intergenic | 35.0% | |
| TTTATCAGATCCTGTTTCAC+TGG | + | chr1.1:56960314-56960333 | MS.gene52945:intron | 35.0% | |
| TTTATCCAGGAAGAGTTTCA+AGG | + | chr1.1:56959721-56959740 | MS.gene52945:CDS | 35.0% | |
| ! | AATGGGGAATGAAGTATTTC+TGG | + | chr1.1:56961369-56961388 | MS.gene52945:CDS | 35.0% |
| ! | ATGGGGAATGAAGTATTTCT+GGG | + | chr1.1:56961370-56961389 | MS.gene52945:CDS | 35.0% |
| ! | CAGCATTTTACAGTTATGTG+TGG | - | chr1.1:56960122-56960141 | None:intergenic | 35.0% |
| ! | CTTCAAATCTAAAATGGCCA+TGG | + | chr1.1:56963028-56963047 | MS.gene52945:CDS | 35.0% |
| ! | GAACCATTGTTTGGTTTAGA+AGG | + | chr1.1:56959601-56959620 | MS.gene52945:CDS | 35.0% |
| ! | TGAAAATGTTGCTTCTACCT+TGG | + | chr1.1:56961345-56961364 | MS.gene52945:CDS | 35.0% |
| ! | TGGGAAGTATATGATGAGAA+GGG | + | chr1.1:56960420-56960439 | MS.gene52945:CDS | 35.0% |
| ! | TTACAACCTTCGATCCTTTT+TGG | + | chr1.1:56960451-56960470 | MS.gene52945:CDS | 35.0% |
| ! | TTGGGAAGTATATGATGAGA+AGG | + | chr1.1:56960419-56960438 | MS.gene52945:CDS | 35.0% |
| !! | CTAGCTTTTCTTTGATGTTG+TGG | - | chr1.1:56960347-56960366 | None:intergenic | 35.0% |
| !! | GTCTCGGTTTATTTTCTTCA+TGG | - | chr1.1:56963186-56963205 | None:intergenic | 35.0% |
| !! | TCTTGTTGTGAGGATCTTTT+TGG | - | chr1.1:56962383-56962402 | None:intergenic | 35.0% |
| !! | TGGTAAGTAGTGCTGTTTAT+AGG | + | chr1.1:56959896-56959915 | MS.gene52945:intron | 35.0% |
| !! | TTCTACATTGGTAGCTTTGT+TGG | + | chr1.1:56960596-56960615 | MS.gene52945:intron | 35.0% |
| !!! | ATGTGCCAATTTTTGAGATC+TGG | + | chr1.1:56961658-56961677 | MS.gene52945:intron | 35.0% |
| !!! | GAAGTTGCGTTATTTTTCTC+AGG | + | chr1.1:56963240-56963259 | MS.gene52945:intron | 35.0% |
| !!! | TGTGCCAATTTTTGAGATCT+GGG | + | chr1.1:56961659-56961678 | MS.gene52945:intron | 35.0% |
| !!! | TTGTCCAGATTTTAGGATCT+AGG | + | chr1.1:56962440-56962459 | MS.gene52945:intron | 35.0% |
| AAACAGTCCCTAAGTGAGAT+TGG | + | chr1.1:56962296-56962315 | MS.gene52945:intron | 40.0% | |
| AACTCTCCGAAATGGAGATA+CGG | - | chr1.1:56960993-56961012 | None:intergenic | 40.0% | |
| AACTTCAAGACTTGGAGACA+AGG | + | chr1.1:56961224-56961243 | MS.gene52945:CDS | 40.0% | |
| AAGAATAGGCAAAAGGTTGG+TGG | + | chr1.1:56960945-56960964 | MS.gene52945:CDS | 40.0% | |
| AATCTCACTTAGGGACTGTT+TGG | - | chr1.1:56962297-56962316 | None:intergenic | 40.0% | |
| ACCACCCAGATCTCAAAAAT+TGG | - | chr1.1:56961666-56961685 | None:intergenic | 40.0% | |
| AGAAAAACGTGACAAACCTC+AGG | - | chr1.1:56961494-56961513 | None:intergenic | 40.0% | |
| AGCACTACTTACCATAGAGA+TGG | - | chr1.1:56959890-56959909 | None:intergenic | 40.0% | |
| ATATGGTGTCCTAAAGAGGA+AGG | + | chr1.1:56959693-56959712 | MS.gene52945:CDS | 40.0% | |
| ATCCGTCAAACTTCAAGACT+TGG | + | chr1.1:56961216-56961235 | MS.gene52945:CDS | 40.0% | |
| ATGCAGGAATGAGAGAACTT+TGG | + | chr1.1:56961270-56961289 | MS.gene52945:CDS | 40.0% | |
| CAAAAATTGGCACATGAGGA+TGG | - | chr1.1:56961653-56961672 | None:intergenic | 40.0% | |
| CAGAATGTGATGTGTGATAC+AGG | - | chr1.1:56961582-56961601 | None:intergenic | 40.0% | |
| CCTCTGTCGTAAAACTTCTT+TGG | - | chr1.1:56960635-56960654 | None:intergenic | 40.0% | |
| CGCATAAAGCAGATATTGTG+GGG | + | chr1.1:56961041-56961060 | MS.gene52945:CDS | 40.0% | |
| CTACTCCAAGAATAGGCAAA+AGG | + | chr1.1:56960938-56960957 | MS.gene52945:CDS | 40.0% | |
| CTCAAGCCATATTCAAGATG+TGG | + | chr1.1:56962641-56962660 | MS.gene52945:CDS | 40.0% | |
| CTCATTCCTGCATCAACTAA+AGG | - | chr1.1:56961263-56961282 | None:intergenic | 40.0% | |
| CTCCAAGTCTTGAAGTTTGA+CGG | - | chr1.1:56961221-56961240 | None:intergenic | 40.0% | |
| CTCGCATAAAGCAGATATTG+TGG | + | chr1.1:56961039-56961058 | MS.gene52945:CDS | 40.0% | |
| CTCTTAGTCCAATTGCTCTA+AGG | - | chr1.1:56961109-56961128 | None:intergenic | 40.0% | |
| CTGGATTGTCCTCAATTCTA+AGG | - | chr1.1:56959629-56959648 | None:intergenic | 40.0% | |
| CTTAGATGCATTTCCCTCTT+AGG | + | chr1.1:56962002-56962021 | MS.gene52945:intron | 40.0% | |
| GAAGATGAGGAACATTGTTG+TGG | - | chr1.1:56963012-56963031 | None:intergenic | 40.0% | |
| GACCTTGAATGTGATATCCT+CGG | + | chr1.1:56961410-56961429 | MS.gene52945:CDS | 40.0% | |
| GATCAGTCCTTGAAATCACT+TGG | + | chr1.1:56959774-56959793 | MS.gene52945:CDS | 40.0% | |
| GCAAAATGAAGGGTTCTCAT+CGG | - | chr1.1:56960100-56960119 | None:intergenic | 40.0% | |
| GTCCCTTCTAAACCAAACAA+TGG | - | chr1.1:56959607-56959626 | None:intergenic | 40.0% | |
| GTTGCTTCTACCTTGGAAAT+GGG | + | chr1.1:56961352-56961371 | MS.gene52945:CDS | 40.0% | |
| TACTTCATTCCCCATTTCCA+AGG | - | chr1.1:56961365-56961384 | None:intergenic | 40.0% | |
| TAGAAGGGACCTTAGAATTG+AGG | + | chr1.1:56959617-56959636 | MS.gene52945:CDS | 40.0% | |
| TATTCAAACAGGGCCTAAGA+GGG | - | chr1.1:56962018-56962037 | None:intergenic | 40.0% | |
| TCAGCAGGAATTAATTGCCA+AGG | - | chr1.1:56960522-56960541 | None:intergenic | 40.0% | |
| TCCAAAAGTTGTCCTCCTTA+AGG | + | chr1.1:56962741-56962760 | MS.gene52945:CDS | 40.0% | |
| TCCAAGAATAGGCAAAAGGT+TGG | + | chr1.1:56960942-56960961 | MS.gene52945:CDS | 40.0% | |
| TCCAGTAACGTTAAGCGAAA+GGG | - | chr1.1:56960196-56960215 | None:intergenic | 40.0% | |
| TCTCGAACCAAGTGATTTCA+AGG | - | chr1.1:56959784-56959803 | None:intergenic | 40.0% | |
| TCTCTTCTGCTGTGTATTAC+AGG | + | chr1.1:56960768-56960787 | MS.gene52945:intron | 40.0% | |
| TCTTGAATATGGCTTGAGTC+AGG | - | chr1.1:56962639-56962658 | None:intergenic | 40.0% | |
| TGCAGGAATGAGAGAACTTT+GGG | + | chr1.1:56961271-56961290 | MS.gene52945:CDS | 40.0% | |
| TGCCTTACATATTCTCCTTC+TGG | - | chr1.1:56962472-56962491 | None:intergenic | 40.0% | |
| TGGCAATTAATTCCTGCTGA+AGG | + | chr1.1:56960522-56960541 | MS.gene52945:CDS | 40.0% | |
| TTAATGTGCATACCTTCAGC+AGG | - | chr1.1:56960537-56960556 | None:intergenic | 40.0% | |
| TTATCCCCGTATCTCCATTT+CGG | + | chr1.1:56960984-56961003 | MS.gene52945:CDS | 40.0% | |
| TTATTCAAACAGGGCCTAAG+AGG | - | chr1.1:56962019-56962038 | None:intergenic | 40.0% | |
| TTCCAGTAACGTTAAGCGAA+AGG | - | chr1.1:56960197-56960216 | None:intergenic | 40.0% | |
| TTCTTAGGATCCTGAAATGC+CGG | - | chr1.1:56962811-56962830 | None:intergenic | 40.0% | |
| TTGCTTCTACCTTGGAAATG+GGG | + | chr1.1:56961353-56961372 | MS.gene52945:CDS | 40.0% | |
| ! | ACAGCTTTTGGACATGTCAT+AGG | + | chr1.1:56962201-56962220 | MS.gene52945:intron | 40.0% |
| ! | ACCAACCTTTTGCCTATTCT+TGG | - | chr1.1:56960946-56960965 | None:intergenic | 40.0% |
| ! | AGAAGTTTTACGACAGAGGT+CGG | + | chr1.1:56960636-56960655 | MS.gene52945:intron | 40.0% |
| ! | AGCTAATGATCAGAAAGTGC+CGG | + | chr1.1:56962789-56962808 | MS.gene52945:CDS | 40.0% |
| ! | CCAAAGAAGTTTTACGACAG+AGG | + | chr1.1:56960632-56960651 | MS.gene52945:intron | 40.0% |
| ! | CGCTATTTACTCTTGTTGTG+AGG | - | chr1.1:56962393-56962412 | None:intergenic | 40.0% |
| ! | CGGCTTGATTCTTCAACTTT+TGG | - | chr1.1:56960016-56960035 | None:intergenic | 40.0% |
| ! | CTGAAGGTATGCACATTAAC+AGG | + | chr1.1:56960538-56960557 | MS.gene52945:intron | 40.0% |
| ! | GAAGCAGTCTTTAGTTCACT+TGG | + | chr1.1:56959752-56959771 | MS.gene52945:CDS | 40.0% |
| ! | GAGGAAGGACAATTTTATCC+AGG | + | chr1.1:56959708-56959727 | MS.gene52945:CDS | 40.0% |
| ! | GCTCTTTTCCTTAGAGCAAT+TGG | + | chr1.1:56961098-56961117 | MS.gene52945:CDS | 40.0% |
| ! | TCCTTAAGGAGGACAACTTT+TGG | - | chr1.1:56962745-56962764 | None:intergenic | 40.0% |
| ! | TGTTGCTTCTACCTTGGAAA+TGG | + | chr1.1:56961351-56961370 | MS.gene52945:CDS | 40.0% |
| !! | AGAGTGTCACAGTTTTTCTC+AGG | - | chr1.1:56963127-56963146 | None:intergenic | 40.0% |
| !!! | GACACTTGAGTTTTTTCCCT+TGG | + | chr1.1:56961186-56961205 | MS.gene52945:CDS | 40.0% |
| AAACCAAGCAACGCGTTACT+AGG | + | chr1.1:56960843-56960862 | MS.gene52945:CDS | 45.0% | |
| ACACTAAGTGGTGCATTCCA+AGG | - | chr1.1:56962541-56962560 | None:intergenic | 45.0% | |
| ACTCTCCGAAATGGAGATAC+GGG | - | chr1.1:56960992-56961011 | None:intergenic | 45.0% | |
| AGCCGAGGATATCACATTCA+AGG | - | chr1.1:56961415-56961434 | None:intergenic | 45.0% | |
| AGTGCTCTCTCATGAGTGAA+CGG | - | chr1.1:56961161-56961180 | None:intergenic | 45.0% | |
| ATCCAGGAAGAGTTTCAAGG+TGG | + | chr1.1:56959724-56959743 | MS.gene52945:CDS | 45.0% | |
| ATCTCAGGATGCTTACCAGA+CGG | + | chr1.1:56961443-56961462 | MS.gene52945:CDS | 45.0% | |
| ATGAGAGAACTTTGGGCTAC+AGG | + | chr1.1:56961278-56961297 | MS.gene52945:CDS | 45.0% | |
| ATGGCATGAACAGACAGACA+TGG | + | chr1.1:56963047-56963066 | MS.gene52945:CDS | 45.0% | |
| ATGTCTGTCTGTTCATGCCA+TGG | - | chr1.1:56963048-56963067 | None:intergenic | 45.0% | |
| ATTTCGGAGAGTTGAGTGTG+AGG | + | chr1.1:56961000-56961019 | MS.gene52945:CDS | 45.0% | |
| CAAGCAGCATCAAAAGCTTC+TGG | + | chr1.1:56962670-56962689 | MS.gene52945:CDS | 45.0% | |
| CAAGGTGGAATAAGCGAAAC+AGG | - | chr1.1:56960504-56960523 | None:intergenic | 45.0% | |
| CACTTAGGGACTGTTTGGAT+TGG | - | chr1.1:56962292-56962311 | None:intergenic | 45.0% | |
| CAGATATTGTGGGGAAACGA+AGG | + | chr1.1:56961050-56961069 | MS.gene52945:CDS | 45.0% | |
| CCAGTAACGTTAAGCGAAAG+GGG | - | chr1.1:56960195-56960214 | None:intergenic | 45.0% | |
| CTCACAAGTGCTTATGTCAG+TGG | + | chr1.1:56962251-56962270 | MS.gene52945:intron | 45.0% | |
| CTGTAGAGCAAGTGTCTTCA+TGG | - | chr1.1:56962936-56962955 | None:intergenic | 45.0% | |
| CTGTTTCGCTTATTCCACCT+TGG | + | chr1.1:56960502-56960521 | MS.gene52945:CDS | 45.0% | |
| GAGATGCTTGCACAAGCAAA+TGG | + | chr1.1:56960476-56960495 | MS.gene52945:CDS | 45.0% | |
| GAGTACTCTCAATGCTCTCT+TGG | + | chr1.1:56959824-56959843 | MS.gene52945:CDS | 45.0% | |
| GCAGGAATTAATTGCCAAGG+TGG | - | chr1.1:56960519-56960538 | None:intergenic | 45.0% | |
| GGATCTAGGTTTGATCCAGA+AGG | + | chr1.1:56962454-56962473 | MS.gene52945:CDS | 45.0% | |
| GGATCTGTTGTATGAGCCTT+GGG | + | chr1.1:56960401-56960420 | MS.gene52945:CDS | 45.0% | |
| TCAAGACTTGGAGACAAGGT+AGG | + | chr1.1:56961228-56961247 | MS.gene52945:CDS | 45.0% | |
| TCACACTCAACTCTCCGAAA+TGG | - | chr1.1:56961001-56961020 | None:intergenic | 45.0% | |
| TCTCTGCCAAAAAGGATCGA+AGG | - | chr1.1:56960460-56960479 | None:intergenic | 45.0% | |
| TGCAAGCATCTCTGCCAAAA+AGG | - | chr1.1:56960468-56960487 | None:intergenic | 45.0% | |
| TTGAATGTGATATCCTCGGC+TGG | + | chr1.1:56961414-56961433 | MS.gene52945:CDS | 45.0% | |
| ! | CTTAGTGTGCTTAGAGCATC+AGG | + | chr1.1:56962553-56962572 | MS.gene52945:CDS | 45.0% |
| ! | GATGCTCTAAGCACACTAAG+TGG | - | chr1.1:56962553-56962572 | None:intergenic | 45.0% |
| ! | TTGACGGATCAGCATTCCAA+GGG | - | chr1.1:56961205-56961224 | None:intergenic | 45.0% |
| ! | TTTGACGGATCAGCATTCCA+AGG | - | chr1.1:56961206-56961225 | None:intergenic | 45.0% |
| !! | ACGGAGCTTTTTCCTTAAGG+AGG | - | chr1.1:56962756-56962775 | None:intergenic | 45.0% |
| !! | ACTCATGAGAGAGCACTTCT+TGG | + | chr1.1:56961164-56961183 | MS.gene52945:CDS | 45.0% |
| !! | CAGACGGAGCTTTTTCCTTA+AGG | - | chr1.1:56962759-56962778 | None:intergenic | 45.0% |
| !!! | GCCAATTTTTGAGATCTGGG+TGG | + | chr1.1:56961662-56961681 | MS.gene52945:intron | 45.0% |
| !!! | GTATTTCTGGGACACGCTTT+TGG | + | chr1.1:56961382-56961401 | MS.gene52945:CDS | 45.0% |
| AAGGCAATGGCTACCTGAGT+TGG | + | chr1.1:56962486-56962505 | MS.gene52945:CDS | 50.0% | |
| ACAGACATGGAGCAAAGCTC+AGG | + | chr1.1:56963060-56963079 | MS.gene52945:CDS | 50.0% | |
| ACTTGGAGACAAGGTAGGAC+TGG | + | chr1.1:56961233-56961252 | MS.gene52945:CDS | 50.0% | |
| AGGTTGGAGCAATGCTGACA+AGG | + | chr1.1:56960881-56960900 | MS.gene52945:CDS | 50.0% | |
| CACCACCTTGAAACTCTTCC+TGG | - | chr1.1:56959729-56959748 | None:intergenic | 50.0% | |
| CAGACATGGAGCAAAGCTCA+GGG | + | chr1.1:56963061-56963080 | MS.gene52945:CDS | 50.0% | |
| CAGGAAGAGTTTCAAGGTGG+TGG | + | chr1.1:56959727-56959746 | MS.gene52945:CDS | 50.0% | |
| CCCCTTTCGCTTAACGTTAC+TGG | + | chr1.1:56960192-56960211 | MS.gene52945:intron | 50.0% | |
| CTCTCCGAAATGGAGATACG+GGG | - | chr1.1:56960991-56961010 | None:intergenic | 50.0% | |
| CTGAGTGGATCCATCATCCT+TGG | + | chr1.1:56962521-56962540 | MS.gene52945:CDS | 50.0% | |
| GAGAACTTTGGGCTACAGGA+TGG | + | chr1.1:56961282-56961301 | MS.gene52945:CDS | 50.0% | |
| GAGCAAAGCTCAGGGAAAGA+TGG | + | chr1.1:56963069-56963088 | MS.gene52945:CDS | 50.0% | |
| GGAAACGAAGGCAACAGTGT+TGG | + | chr1.1:56961062-56961081 | MS.gene52945:CDS | 50.0% | |
| GGGATCTGTTGTATGAGCCT+TGG | + | chr1.1:56960400-56960419 | MS.gene52945:CDS | 50.0% | |
| GTGGTGCATTCCAAGGATGA+TGG | - | chr1.1:56962534-56962553 | None:intergenic | 50.0% | |
| TGGTCTCGAACCAGTGAAAC+AGG | - | chr1.1:56960327-56960346 | None:intergenic | 50.0% | |
| TTGTCAGCATTGCTCCAACC+TGG | - | chr1.1:56960882-56960901 | None:intergenic | 50.0% | |
| ! | GGCTACCCTTTAGTTGATGC+AGG | + | chr1.1:56961254-56961273 | MS.gene52945:CDS | 50.0% |
| ! | GGCTTGAGTCAGGTTTTCTC+TGG | - | chr1.1:56962629-56962648 | None:intergenic | 50.0% |
| !! | AAGCTTCTGGCTCTGAAGCA+AGG | + | chr1.1:56962683-56962702 | MS.gene52945:CDS | 50.0% |
| !! | AGCTTCTGGCTCTGAAGCAA+GGG | + | chr1.1:56962684-56962703 | MS.gene52945:CDS | 50.0% |
| !! | GGATGATGGATCCACTCAGT+TGG | - | chr1.1:56962520-56962539 | None:intergenic | 50.0% |
| !! | TCAGAAAGTGCCGGCATTTC+AGG | + | chr1.1:56962798-56962817 | MS.gene52945:CDS | 50.0% |
| ACGCGTTACTAGGACGAGCA+TGG | + | chr1.1:56960853-56960872 | MS.gene52945:CDS | 55.0% | |
| AGCACTAGCTGCTGCTGCTA+GGG | + | chr1.1:56959647-56959666 | MS.gene52945:CDS | 55.0% | |
| ATACGGGGATAACAGCGAGG+TGG | - | chr1.1:56960976-56960995 | None:intergenic | 55.0% | |
| CGTCCTAGTAACGCGTTGCT+TGG | - | chr1.1:56960849-56960868 | None:intergenic | 55.0% | |
| CTCGGCTGGCAGTATATCTC+AGG | + | chr1.1:56961428-56961447 | MS.gene52945:CDS | 55.0% | |
| CTGAGATATACTGCCAGCCG+AGG | - | chr1.1:56961430-56961449 | None:intergenic | 55.0% | |
| GAGATACGGGGATAACAGCG+AGG | - | chr1.1:56960979-56960998 | None:intergenic | 55.0% | |
| GTTGGCATTCTCGCCAACTC+AGG | - | chr1.1:56962502-56962521 | None:intergenic | 55.0% | |
| TGAGCGCTTGGATGATCCTG+AGG | + | chr1.1:56961475-56961494 | MS.gene52945:CDS | 55.0% | |
| TGGCGAGAATGCCAACTGAG+TGG | + | chr1.1:56962506-56962525 | MS.gene52945:CDS | 55.0% | |
| ! | AGAGCATCAGGAGTCGAGCT+AGG | + | chr1.1:56962565-56962584 | MS.gene52945:CDS | 55.0% |
| ! | CATTTTCATGCAGGGGCGAC+AGG | + | chr1.1:56963392-56963411 | MS.gene52945:intron | 55.0% |
| CAGCACTAGCTGCTGCTGCT+AGG | + | chr1.1:56959646-56959665 | MS.gene52945:CDS | 60.0% | |
| CTAGCAGCAGCAGCTAGTGC+TGG | - | chr1.1:56959648-56959667 | None:intergenic | 60.0% | |
| CTAGCTGCTGCTGCTAGGGA+TGG | + | chr1.1:56959651-56959670 | MS.gene52945:CDS | 60.0% | |
| CTAGGACGAGCATGGTCTCC+AGG | + | chr1.1:56960861-56960880 | MS.gene52945:CDS | 60.0% | |
| GACGAGCATGGTCTCCAGGT+TGG | + | chr1.1:56960865-56960884 | MS.gene52945:CDS | 60.0% | |
| TTTCATGCAGGGGCGACAGG+AGG | + | chr1.1:56963395-56963414 | MS.gene52945:intron | 60.0% | |
| CGCTCAAGCTCGTGACCGTC+TGG | - | chr1.1:56961461-56961480 | None:intergenic | 65.0% | |
| CGGTCACGAGCTTGAGCGCT+TGG | + | chr1.1:56961463-56961482 | MS.gene52945:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 56959588 | 56963421 | 56959588 | ID=MS.gene52945 |
| chr1.1 | mRNA | 56959588 | 56963421 | 56959588 | ID=MS.gene52945.t1;Parent=MS.gene52945 |
| chr1.1 | exon | 56959588 | 56959897 | 56959588 | ID=MS.gene52945.t1.exon1;Parent=MS.gene52945.t1 |
| chr1.1 | CDS | 56959588 | 56959897 | 56959588 | ID=cds.MS.gene52945.t1;Parent=MS.gene52945.t1 |
| chr1.1 | exon | 56960322 | 56960543 | 56960322 | ID=MS.gene52945.t1.exon2;Parent=MS.gene52945.t1 |
| chr1.1 | CDS | 56960322 | 56960543 | 56960322 | ID=cds.MS.gene52945.t1;Parent=MS.gene52945.t1 |
| chr1.1 | exon | 56960790 | 56961496 | 56960790 | ID=MS.gene52945.t1.exon3;Parent=MS.gene52945.t1 |
| chr1.1 | CDS | 56960790 | 56961496 | 56960790 | ID=cds.MS.gene52945.t1;Parent=MS.gene52945.t1 |
| chr1.1 | exon | 56962448 | 56963090 | 56962448 | ID=MS.gene52945.t1.exon4;Parent=MS.gene52945.t1 |
| chr1.1 | CDS | 56962448 | 56963090 | 56962448 | ID=cds.MS.gene52945.t1;Parent=MS.gene52945.t1 |
| chr1.1 | exon | 56963405 | 56963421 | 56963405 | ID=MS.gene52945.t1.exon5;Parent=MS.gene52945.t1 |
| chr1.1 | CDS | 56963405 | 56963421 | 56963405 | ID=cds.MS.gene52945.t1;Parent=MS.gene52945.t1 |
| Gene Sequence |
| Protein sequence |
