Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53105.t1 | XP_013453809.1 | 99 | 501 | 4 | 1 | 1 | 501 | 5 | 504 | 1.10E-285 | 991.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53105.t1 | G7JWM8 | 99.0 | 501 | 4 | 1 | 1 | 501 | 1 | 500 | 7.9e-286 | 991.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058848 | MS.gene53105 | 0.804904 | 1.73E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53105.t1 | MTR_5g042910 | 99.002 | 501 | 4 | 1 | 1 | 501 | 5 | 504 | 0.0 | 1022 |
| MS.gene53105.t1 | MTR_5g042910 | 99.002 | 501 | 4 | 1 | 1 | 501 | 1 | 500 | 0.0 | 1022 |
| MS.gene53105.t1 | MTR_7g011790 | 50.725 | 552 | 204 | 8 | 14 | 499 | 1 | 550 | 0.0 | 534 |
| MS.gene53105.t1 | MTR_5g037270 | 43.778 | 450 | 206 | 8 | 85 | 492 | 38 | 482 | 1.26e-112 | 342 |
| MS.gene53105.t1 | MTR_6g009410 | 52.256 | 266 | 127 | 0 | 227 | 492 | 96 | 361 | 2.57e-99 | 303 |
| MS.gene53105.t1 | MTR_6g009410 | 39.655 | 406 | 241 | 2 | 87 | 492 | 37 | 438 | 1.95e-98 | 304 |
| MS.gene53105.t1 | MTR_4g116840 | 26.122 | 245 | 138 | 10 | 244 | 484 | 522 | 727 | 8.77e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53105.t1 | AT1G13970 | 54.753 | 526 | 171 | 11 | 14 | 497 | 1 | 501 | 0.0 | 526 |
| MS.gene53105.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene53105.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene53105.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene53105.t1 | AT5G39430 | 51.134 | 485 | 162 | 7 | 85 | 500 | 27 | 505 | 1.26e-154 | 450 |
| MS.gene53105.t1 | AT1G59650 | 59.559 | 272 | 109 | 1 | 222 | 492 | 214 | 485 | 4.79e-118 | 356 |
| MS.gene53105.t1 | AT1G10410 | 51.877 | 293 | 141 | 0 | 200 | 492 | 188 | 480 | 1.68e-106 | 326 |
Find 115 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAACACCAATTCTTTA+AGG | 0.142848 | 5.4:+31926976 | MS.gene53105:CDS |
| TACTGGAGTAACTGAGTATT+TGG | 0.157211 | 5.4:-31925308 | None:intergenic |
| TAGAGAAAGACTCAAAATTT+TGG | 0.181148 | 5.4:+31926865 | MS.gene53105:CDS |
| CATTGGTATCTATTTGACTA+TGG | 0.304264 | 5.4:-31924396 | None:intergenic |
| GATGAGATGGAAAAGGTTAA+AGG | 0.325650 | 5.4:+31926815 | MS.gene53105:CDS |
| TCATCCTGCTATGTAGATTC+AGG | 0.332131 | 5.4:+31925338 | MS.gene53105:CDS |
| ACAAATAAATCAACACCTAT+TGG | 0.333960 | 5.4:-31926089 | None:intergenic |
| TGACCCTTGCTCTTCCCATT+TGG | 0.338669 | 5.4:-31924160 | None:intergenic |
| TGGTCAAATTCCTACCATTA+TGG | 0.345688 | 5.4:+31928379 | MS.gene53105:CDS |
| TCAACACCTATTGGTTTGTA+AGG | 0.351478 | 5.4:-31926080 | None:intergenic |
| TTGTATATACCTTAAAGAAT+TGG | 0.357864 | 5.4:-31926985 | None:intergenic |
| GCAATGTGATTTATCTTCCT+TGG | 0.359342 | 5.4:-31926116 | None:intergenic |
| AAAAGGCATTCCCTGGTTCC+TGG | 0.378446 | 5.4:+31925830 | MS.gene53105:CDS |
| ACTTCTCATTGTAAATATAC+AGG | 0.382804 | 5.4:+31926187 | MS.gene53105:CDS |
| GGTTTGTAAGGGCAGACATC+TGG | 0.386041 | 5.4:-31926068 | None:intergenic |
| GAACTCAGATTAAGGTCTTC+CGG | 0.386301 | 5.4:-31926902 | None:intergenic |
| ATGAGAAGTGAAGGTACATT+TGG | 0.397742 | 5.4:-31926173 | None:intergenic |
| AAAAGAAGGAGTCATAAATC+TGG | 0.410525 | 5.4:+31924184 | MS.gene53105:CDS |
| TCTCTGCAGAACTCAGATTA+AGG | 0.418630 | 5.4:-31926910 | None:intergenic |
| TTCCAGAGTTGCCATTGAAA+AGG | 0.421683 | 5.4:+31924236 | MS.gene53105:CDS |
| GATGACTTCAGTAGTGTTCA+TGG | 0.422593 | 5.4:+31925144 | MS.gene53105:CDS |
| ATTTCCCATGGCGTTGCCGC+TGG | 0.431870 | 5.4:-31925282 | None:intergenic |
| TTTCTTTATCGACCGAGAGC+AGG | 0.437499 | 5.4:+31925781 | MS.gene53105:CDS |
| TCCAGTTTCAACTCAAGAAA+AGG | 0.437886 | 5.4:+31925813 | MS.gene53105:CDS |
| TTTGTCTTCAAGAGCCATAA+TGG | 0.456248 | 5.4:-31928393 | None:intergenic |
| ATGAAAACCAAAATGTTGGC+TGG | 0.456829 | 5.4:+31924088 | None:intergenic |
| TTGAAAAGGGTTAGCAATGC+AGG | 0.457507 | 5.4:+31924250 | MS.gene53105:CDS |
| AGGTCTATCTCAAAGTAGTT+AGG | 0.458243 | 5.4:-31927738 | None:intergenic |
| AGTTGTGGTTCAAAACCAAA+TGG | 0.458980 | 5.4:+31924145 | MS.gene53105:CDS |
| AGCAGGATGAACTTTCATAC+TGG | 0.460053 | 5.4:-31925325 | None:intergenic |
| ATTGGTTTGACAGAGATTAG+TGG | 0.462765 | 5.4:+31926790 | MS.gene53105:intron |
| TCCAGAGTTGCCATTGAAAA+GGG | 0.466355 | 5.4:+31924237 | MS.gene53105:CDS |
| CTTCGAGACCGTGTAAAGAA+TGG | 0.470132 | 5.4:+31927807 | MS.gene53105:CDS |
| TTTCGCCAGCGGCAACGCCA+TGG | 0.474812 | 5.4:+31925277 | MS.gene53105:CDS |
| AAGTTAGCTTCCACCACAAT+GGG | 0.474875 | 5.4:+31924121 | MS.gene53105:CDS |
| TATCCTGCTAGCATGTTCAT+TGG | 0.475103 | 5.4:+31926346 | MS.gene53105:CDS |
| CTCCATTCTTATCTATCTTG+AGG | 0.475536 | 5.4:-31925391 | None:intergenic |
| AAGAATGGAATACTTGATGT+TGG | 0.478006 | 5.4:+31927822 | MS.gene53105:CDS |
| ATGAGATGGAAAAGGTTAAA+GGG | 0.481261 | 5.4:+31926816 | MS.gene53105:CDS |
| TCCTCGATATATAGCTAAAA+CGG | 0.484530 | 5.4:-31927770 | None:intergenic |
| ACTGGAGTAACTGAGTATTT+GGG | 0.484825 | 5.4:-31925307 | None:intergenic |
| TCTCAGTGAATTTGTTCACC+TGG | 0.488032 | 5.4:+31924294 | MS.gene53105:CDS |
| TTTGACTATGGTATTGAACC+TGG | 0.496024 | 5.4:-31924384 | None:intergenic |
| ACTGAAGTCATCATCTGAAT+CGG | 0.496214 | 5.4:-31925133 | None:intergenic |
| TTTGGCTGGAGTAGTTAATC+CGG | 0.496798 | 5.4:+31926883 | MS.gene53105:CDS |
| GAAATTACAGACCAGGAACC+AGG | 0.499193 | 5.4:-31925841 | None:intergenic |
| GTCTGCCCTTACAAACCAAT+AGG | 0.500993 | 5.4:+31926074 | MS.gene53105:CDS |
| AGAGCAAGGGTCACAAAAGA+AGG | 0.502944 | 5.4:+31924170 | MS.gene53105:CDS |
| TTCGCCAGCGGCAACGCCAT+GGG | 0.506780 | 5.4:+31925278 | MS.gene53105:CDS |
| ATTGGTGATGCCAATGGAGA+AGG | 0.509060 | 5.4:+31926364 | MS.gene53105:CDS |
| TTCTTTATCGACCGAGAGCA+GGG | 0.512932 | 5.4:+31925782 | MS.gene53105:CDS |
| AGTCAAACCATGCATCCTCT+TGG | 0.515815 | 5.4:-31925089 | None:intergenic |
| TTGATTTATTTGTGAGTCCA+AGG | 0.519202 | 5.4:+31926099 | MS.gene53105:CDS |
| AAGCAGCACAACACTTGCTC+AGG | 0.519810 | 5.4:-31928326 | None:intergenic |
| GTTGTCGGAGAATTTCGAAA+AGG | 0.522841 | 5.4:+31926411 | MS.gene53105:CDS |
| TTTACAGGCACAAAAGGAAG+AGG | 0.525168 | 5.4:+31928298 | MS.gene53105:intron |
| AAGGCTCAAGCCTTCTCCAT+TGG | 0.526944 | 5.4:-31926374 | None:intergenic |
| GTGTTGAGGACGCGAAAGCA+CGG | 0.533305 | 5.4:-31926963 | None:intergenic |
| CATCCTGCTATGTAGATTCA+GGG | 0.534072 | 5.4:+31925339 | MS.gene53105:CDS |
| AGATTCAGGGTGCAAATATG+AGG | 0.535593 | 5.4:+31925352 | MS.gene53105:CDS |
| AGTGGATGATGAGATGGAAA+AGG | 0.536497 | 5.4:+31926808 | MS.gene53105:CDS |
| TGATGTTGGATTAACTATCC+AGG | 0.538342 | 5.4:+31927836 | MS.gene53105:CDS |
| GCACCCTGAATCTACATAGC+AGG | 0.539585 | 5.4:-31925342 | None:intergenic |
| ACTCAAGAAAAGGCATTCCC+TGG | 0.539875 | 5.4:+31925823 | MS.gene53105:CDS |
| GAGATTAGTGGATGATGAGA+TGG | 0.540497 | 5.4:+31926802 | MS.gene53105:intron |
| AAAATTGACTTTGTTAACCA+TGG | 0.541173 | 5.4:+31928359 | MS.gene53105:CDS |
| TGTTGAGGACGCGAAAGCAC+GGG | 0.543844 | 5.4:-31926962 | None:intergenic |
| TCACCAATGAACATGCTAGC+AGG | 0.549372 | 5.4:-31926349 | None:intergenic |
| ATGGCGTTGCCGCTGGCGAA+AGG | 0.551383 | 5.4:-31925275 | None:intergenic |
| TTTGGATGTTCACCGACACT+TGG | 0.551399 | 5.4:-31926155 | None:intergenic |
| AACCACCTTTGTCAAAATCC+AGG | 0.552169 | 5.4:-31924312 | None:intergenic |
| CTGCGGAGCTTGAACACTGA+AGG | 0.553302 | 5.4:-31925865 | None:intergenic |
| CAACACCTATTGGTTTGTAA+GGG | 0.556147 | 5.4:-31926079 | None:intergenic |
| CAAGTATTCCATTCTTTACA+CGG | 0.563804 | 5.4:-31927815 | None:intergenic |
| GTTGTGGTTCAAAACCAAAT+GGG | 0.565547 | 5.4:+31924146 | MS.gene53105:CDS |
| TCTTCAAGAGCCATAATGGT+AGG | 0.575430 | 5.4:-31928389 | None:intergenic |
| TAAGGGCAGACATCTGGAGC+AGG | 0.575624 | 5.4:-31926062 | None:intergenic |
| GAAGTTAGCTTCCACCACAA+TGG | 0.578899 | 5.4:+31924120 | MS.gene53105:CDS |
| TACCTCAAGATAGATAAGAA+TGG | 0.583166 | 5.4:+31925389 | MS.gene53105:CDS |
| GGAACTTGAATCCCTGCTCT+CGG | 0.585440 | 5.4:-31925793 | None:intergenic |
| GAGTATACCAAGAGGATGCA+TGG | 0.588884 | 5.4:+31925082 | MS.gene53105:CDS |
| TTGACTATGGTATTGAACCT+GGG | 0.589577 | 5.4:-31924383 | None:intergenic |
| TTTATGTAGAGATAAGCAAA+AGG | 0.589636 | 5.4:+31926037 | MS.gene53105:intron |
| ACCTTAAAGAATTGGTGTTG+AGG | 0.589868 | 5.4:-31926977 | None:intergenic |
| AGTATTTGGGACATTTCCCA+TGG | 0.591513 | 5.4:-31925294 | None:intergenic |
| AAAACCAAATGGGAAGAGCA+AGG | 0.596794 | 5.4:+31924156 | MS.gene53105:CDS |
| TCCACCACAATGGGAAGTTG+TGG | 0.597370 | 5.4:+31924130 | MS.gene53105:CDS |
| AACATGCTAGCAGGATATGT+AGG | 0.599426 | 5.4:-31926340 | None:intergenic |
| ACCACAACTTCCCATTGTGG+TGG | 0.601317 | 5.4:-31924131 | None:intergenic |
| TTTAGCTATATATCGAGGAA+GGG | 0.604329 | 5.4:+31927774 | MS.gene53105:CDS |
| AAACCAAATGGGAAGAGCAA+GGG | 0.607442 | 5.4:+31924157 | MS.gene53105:CDS |
| AAGGTGGTTCGGCCGCATGT+AGG | 0.609419 | 5.4:+31924326 | MS.gene53105:CDS |
| TGAACCACAACTTCCCATTG+TGG | 0.609774 | 5.4:-31924134 | None:intergenic |
| GGCCGCATGTAGGAGATCAG+AGG | 0.611273 | 5.4:+31924336 | MS.gene53105:CDS |
| CATATTGAACTTCCAAGTGT+CGG | 0.612685 | 5.4:+31926143 | MS.gene53105:CDS |
| TGTCAAGTTTCATCTTACCC+AGG | 0.615127 | 5.4:+31924366 | MS.gene53105:CDS |
| AGCTAAAACGGTGTATGTCG+AGG | 0.615162 | 5.4:-31927758 | None:intergenic |
| ACAACTTAAAATATAGTACA+AGG | 0.621247 | 5.4:-31926393 | None:intergenic |
| AAAGGTTAAAGGGTATGCAA+AGG | 0.623130 | 5.4:+31926826 | MS.gene53105:CDS |
| CATAGTCAAATAGATACCAA+TGG | 0.629508 | 5.4:+31924397 | MS.gene53105:CDS |
| ATGTTCATTGGTGATGCCAA+TGG | 0.630081 | 5.4:+31926358 | MS.gene53105:CDS |
| TGAAGGCGAAATTACAGACC+AGG | 0.634925 | 5.4:-31925848 | None:intergenic |
| AAACTTATACATGCTTACAA+TGG | 0.638264 | 5.4:+31926935 | MS.gene53105:CDS |
| ATATTTACAATGAGAAGTGA+AGG | 0.641644 | 5.4:-31926182 | None:intergenic |
| TAATGGTAGGAATTTGACCA+TGG | 0.659554 | 5.4:-31928376 | None:intergenic |
| AACCTCTGATCTCCTACATG+CGG | 0.665383 | 5.4:-31924338 | None:intergenic |
| AGCAATGCAGGAAACCGCGT+GGG | 0.670211 | 5.4:+31924262 | MS.gene53105:CDS |
| AAATTACAGACCAGGAACCA+GGG | 0.679337 | 5.4:-31925840 | None:intergenic |
| TTGATCTTATCCTGAAAACA+CGG | 0.679445 | 5.4:-31926442 | None:intergenic |
| TGGCAACTCTGGAAGCGCAG+AGG | 0.680202 | 5.4:-31924227 | None:intergenic |
| CATAAATCTGGAAAGCGCAG+AGG | 0.689757 | 5.4:+31924196 | MS.gene53105:CDS |
| TAGCAATGCAGGAAACCGCG+TGG | 0.700351 | 5.4:+31924261 | MS.gene53105:CDS |
| TTAATCTGAGTTCTGCAGAG+AGG | 0.720842 | 5.4:+31926912 | MS.gene53105:CDS |
| TGAGATTAAAATCTCCCACG+CGG | 0.794497 | 5.4:-31924276 | None:intergenic |
| GACTTCAGTAGTGTTCATGG+AGG | 0.803341 | 5.4:+31925147 | MS.gene53105:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTTTAATAAAAAGTAA+TGG | - | chr5.4:31928129-31928148 | None:intergenic | 10.0% |
| !!! | ATTAATGTATTTTAAATACA+GGG | + | chr5.4:31927714-31927733 | MS.gene53105:intron | 10.0% |
| !!! | TATTAATGTATTTTAAATAC+AGG | + | chr5.4:31927713-31927732 | MS.gene53105:intron | 10.0% |
| !!! | TTTATTTATATATTCCTTTT+TGG | + | chr5.4:31925236-31925255 | MS.gene53105:intron | 10.0% |
| !! | AAAAAACTAAAAATAACCAA+AGG | - | chr5.4:31924436-31924455 | None:intergenic | 15.0% |
| !! | AAAATTTGTGATTTCATTAT+TGG | + | chr5.4:31924985-31925004 | MS.gene53105:intron | 15.0% |
| !! | AATAACTAAAGAAAATAGAA+GGG | - | chr5.4:31926598-31926617 | None:intergenic | 15.0% |
| !! | TAATAACTAAAGAAAATAGA+AGG | - | chr5.4:31926599-31926618 | None:intergenic | 15.0% |
| !! | TTGATTACATAATTTAATCA+CGG | + | chr5.4:31926300-31926319 | MS.gene53105:intron | 15.0% |
| !!! | AAACTCATTTTAAATTATGT+AGG | - | chr5.4:31927543-31927562 | None:intergenic | 15.0% |
| !!! | ATTTTTCAACATTTTCAAAT+AGG | - | chr5.4:31926281-31926300 | None:intergenic | 15.0% |
| !!! | CATATATAAATACCAATTTT+TGG | - | chr5.4:31926007-31926026 | None:intergenic | 15.0% |
| !!! | GTTATTTTTGTATTCAATTT+TGG | + | chr5.4:31927217-31927236 | MS.gene53105:intron | 15.0% |
| !! | AAAGTTCAAGTAAATATTGA+TGG | - | chr5.4:31926485-31926504 | None:intergenic | 20.0% |
| !! | ACAACTTAAAATATAGTACA+AGG | - | chr5.4:31926396-31926415 | None:intergenic | 20.0% |
| !! | ATACAAATTTATGTCTTGAT+CGG | + | chr5.4:31927002-31927021 | MS.gene53105:intron | 20.0% |
| !! | CAACTATTATAAGTTTATAG+TGG | - | chr5.4:31927568-31927587 | None:intergenic | 20.0% |
| !! | CCTGTAAAAACATAAATATA+GGG | - | chr5.4:31928286-31928305 | None:intergenic | 20.0% |
| !! | GAATGATAGACATAAATTAT+TGG | - | chr5.4:31925588-31925607 | None:intergenic | 20.0% |
| !! | TTATAGATATGATAACACTA+GGG | + | chr5.4:31927240-31927259 | MS.gene53105:intron | 20.0% |
| !! | TTGATAAAACTTATTAATCC+CGG | - | chr5.4:31928166-31928185 | None:intergenic | 20.0% |
| !! | TTGTATATACCTTAAAGAAT+TGG | - | chr5.4:31926988-31927007 | None:intergenic | 20.0% |
| !! | TTTAGAAGTAGTTATCATTA+AGG | - | chr5.4:31927121-31927140 | None:intergenic | 20.0% |
| !!! | ATGATATTGTAACTTTAAGA+AGG | - | chr5.4:31926747-31926766 | None:intergenic | 20.0% |
| !!! | ATTAACTTCCAAATGTTTTT+AGG | - | chr5.4:31925689-31925708 | None:intergenic | 20.0% |
| !!! | TATTCAATTCAGTTTTGTTA+TGG | + | chr5.4:31926234-31926253 | MS.gene53105:intron | 20.0% |
| !!! | TGTACTATATTTTAAGTTGT+CGG | + | chr5.4:31926396-31926415 | MS.gene53105:CDS | 20.0% |
| ! | AAAATACAAAGTTGAAACGT+GGG | - | chr5.4:31924620-31924639 | None:intergenic | 25.0% |
| ! | AAACTTATACATGCTTACAA+TGG | + | chr5.4:31926935-31926954 | MS.gene53105:CDS | 25.0% |
| ! | AAATTAAAGTCGCATAGTTA+TGG | + | chr5.4:31927193-31927212 | MS.gene53105:intron | 25.0% |
| ! | AAGACATGAAATGAAAACAA+AGG | - | chr5.4:31925535-31925554 | None:intergenic | 25.0% |
| ! | ACAAATAAATCAACACCTAT+TGG | - | chr5.4:31926092-31926111 | None:intergenic | 25.0% |
| ! | ACAATAATGAATTGTTGAAC+AGG | + | chr5.4:31925745-31925764 | MS.gene53105:intron | 25.0% |
| ! | ACTTCTCATTGTAAATATAC+AGG | + | chr5.4:31926187-31926206 | MS.gene53105:CDS | 25.0% |
| ! | AGTAAGTTATGTTAACTCTA+AGG | - | chr5.4:31925025-31925044 | None:intergenic | 25.0% |
| ! | ATATTTACAATGAGAAGTGA+AGG | - | chr5.4:31926185-31926204 | None:intergenic | 25.0% |
| ! | ATTTCATTATTGGAAGGAAT+CGG | + | chr5.4:31924995-31925014 | MS.gene53105:intron | 25.0% |
| ! | GCCTGTAAAAACATAAATAT+AGG | - | chr5.4:31928287-31928306 | None:intergenic | 25.0% |
| ! | GTAAGTTATGTTAACTCTAA+GGG | - | chr5.4:31925024-31925043 | None:intergenic | 25.0% |
| ! | GTTATAGATATGATAACACT+AGG | + | chr5.4:31927239-31927258 | MS.gene53105:intron | 25.0% |
| ! | GTTCATTTACTTCCAAAAAT+TGG | + | chr5.4:31925992-31926011 | MS.gene53105:intron | 25.0% |
| ! | TAATAATGTGTGAAATCACA+TGG | - | chr5.4:31927698-31927717 | None:intergenic | 25.0% |
| ! | TAATGCAAACAATACAATGT+CGG | - | chr5.4:31924902-31924921 | None:intergenic | 25.0% |
| ! | TGAATCTGATTATTCAGAAA+GGG | + | chr5.4:31927278-31927297 | MS.gene53105:intron | 25.0% |
| ! | TGTTAAAGCCTAAAAACATT+TGG | + | chr5.4:31925678-31925697 | MS.gene53105:intron | 25.0% |
| ! | TTATTTGTGTATACGTGTTA+TGG | + | chr5.4:31926616-31926635 | MS.gene53105:intron | 25.0% |
| ! | TTGAATCTGATTATTCAGAA+AGG | + | chr5.4:31927277-31927296 | MS.gene53105:intron | 25.0% |
| ! | TTTATGTAGAGATAAGCAAA+AGG | + | chr5.4:31926037-31926056 | MS.gene53105:intron | 25.0% |
| ! | TTTGTGATTTCATTATTGGA+AGG | + | chr5.4:31924989-31925008 | MS.gene53105:intron | 25.0% |
| !! | AAAATTGACTTTGTTAACCA+TGG | + | chr5.4:31928359-31928378 | MS.gene53105:CDS | 25.0% |
| !! | TAGAGAAAGACTCAAAATTT+TGG | + | chr5.4:31926865-31926884 | MS.gene53105:CDS | 25.0% |
| !!! | AATTTTGAGTCTTTCTCTAA+AGG | - | chr5.4:31926864-31926883 | None:intergenic | 25.0% |
| !!! | ACAATGAACTTGTTAGATTT+CGG | + | chr5.4:31924524-31924543 | MS.gene53105:intron | 25.0% |
| !!! | ATTTTGAGTCTTTCTCTAAA+GGG | - | chr5.4:31926863-31926882 | None:intergenic | 25.0% |
| !!! | CCCTATATTTATGTTTTTAC+AGG | + | chr5.4:31928283-31928302 | MS.gene53105:intron | 25.0% |
| AAAAGAAGGAGTCATAAATC+TGG | + | chr5.4:31924184-31924203 | MS.gene53105:CDS | 30.0% | |
| AAGAATGGAATACTTGATGT+TGG | + | chr5.4:31927822-31927841 | MS.gene53105:CDS | 30.0% | |
| AATGGTTCAAATCAACTTTG+AGG | + | chr5.4:31927323-31927342 | MS.gene53105:intron | 30.0% | |
| AATTTGCATGAAAATAGCAG+AGG | + | chr5.4:31924796-31924815 | MS.gene53105:intron | 30.0% | |
| ACTTCAAACTAACGATTTCA+AGG | - | chr5.4:31927873-31927892 | None:intergenic | 30.0% | |
| ATGAGATGGAAAAGGTTAAA+GGG | + | chr5.4:31926816-31926835 | MS.gene53105:CDS | 30.0% | |
| CAAAATACAAAGTTGAAACG+TGG | - | chr5.4:31924621-31924640 | None:intergenic | 30.0% | |
| CAAGTATTCCATTCTTTACA+CGG | - | chr5.4:31927818-31927837 | None:intergenic | 30.0% | |
| CATAGTCAAATAGATACCAA+TGG | + | chr5.4:31924397-31924416 | MS.gene53105:CDS | 30.0% | |
| CATTGGTATCTATTTGACTA+TGG | - | chr5.4:31924399-31924418 | None:intergenic | 30.0% | |
| CCATCATAACAATATCATCA+AGG | - | chr5.4:31924461-31924480 | None:intergenic | 30.0% | |
| GAATCTGATTATTCAGAAAG+GGG | + | chr5.4:31927279-31927298 | MS.gene53105:intron | 30.0% | |
| GATTGAATGTAACTTCATGT+TGG | - | chr5.4:31926576-31926595 | None:intergenic | 30.0% | |
| TACCTCAAGATAGATAAGAA+TGG | + | chr5.4:31925389-31925408 | MS.gene53105:CDS | 30.0% | |
| TAGTCAAAGAAACAAACGTT+TGG | - | chr5.4:31924715-31924734 | None:intergenic | 30.0% | |
| TCCTCGATATATAGCTAAAA+CGG | - | chr5.4:31927773-31927792 | None:intergenic | 30.0% | |
| TTACCAAAGTTGGAACATAT+GGG | + | chr5.4:31924648-31924667 | MS.gene53105:intron | 30.0% | |
| TTGATCTTATCCTGAAAACA+CGG | - | chr5.4:31926445-31926464 | None:intergenic | 30.0% | |
| TTGATTTATTTGTGAGTCCA+AGG | + | chr5.4:31926099-31926118 | MS.gene53105:CDS | 30.0% | |
| TTTACCAAAGTTGGAACATA+TGG | + | chr5.4:31924647-31924666 | MS.gene53105:intron | 30.0% | |
| TTTAGCTATATATCGAGGAA+GGG | + | chr5.4:31927774-31927793 | MS.gene53105:CDS | 30.0% | |
| ! | CCTTGATGATATTGTTATGA+TGG | + | chr5.4:31924458-31924477 | MS.gene53105:intron | 30.0% |
| ! | CTTAGAATCTGATTTTTGCA+TGG | + | chr5.4:31927420-31927439 | MS.gene53105:intron | 30.0% |
| ! | TTCATCGGTTGAAAATTCTA+GGG | + | chr5.4:31926664-31926683 | MS.gene53105:intron | 30.0% |
| !! | AACTATTTGATAACTTGCTC+AGG | - | chr5.4:31927647-31927666 | None:intergenic | 30.0% |
| !! | AACTTGTTAGATTTCGGATT+TGG | + | chr5.4:31924530-31924549 | MS.gene53105:intron | 30.0% |
| !! | TATGTTTTTACAGGCACAAA+AGG | + | chr5.4:31928292-31928311 | MS.gene53105:intron | 30.0% |
| !! | TTGTTAATTCAGTTCTAGAG+AGG | + | chr5.4:31927936-31927955 | MS.gene53105:intron | 30.0% |
| !! | TTTTAGCTATATATCGAGGA+AGG | + | chr5.4:31927773-31927792 | MS.gene53105:CDS | 30.0% |
| AAATTAAACCTTGCATGTCC+GGG | + | chr5.4:31928145-31928164 | MS.gene53105:intron | 35.0% | |
| AACAATACAATGTCGGAATG+TGG | - | chr5.4:31924895-31924914 | None:intergenic | 35.0% | |
| AACAATCTGTTCGACCAAAA+AGG | - | chr5.4:31925253-31925272 | None:intergenic | 35.0% | |
| ACTCCTTCTATGTGAATTGT+CGG | - | chr5.4:31925942-31925961 | None:intergenic | 35.0% | |
| ACTGAAGTCATCATCTGAAT+CGG | - | chr5.4:31925136-31925155 | None:intergenic | 35.0% | |
| ACTGGAGTAACTGAGTATTT+GGG | - | chr5.4:31925310-31925329 | None:intergenic | 35.0% | |
| AGGAGCAAAAAAGTTACCAT+TGG | - | chr5.4:31924416-31924435 | None:intergenic | 35.0% | |
| AGGTCTATCTCAAAGTAGTT+AGG | - | chr5.4:31927741-31927760 | None:intergenic | 35.0% | |
| AGTTGTGGTTCAAAACCAAA+TGG | + | chr5.4:31924145-31924164 | MS.gene53105:CDS | 35.0% | |
| ATCGATTAGACAATCCAGAT+CGG | - | chr5.4:31924859-31924878 | None:intergenic | 35.0% | |
| ATGTAACTTCATGTTGGTGT+CGG | - | chr5.4:31926570-31926589 | None:intergenic | 35.0% | |
| CAAATTAAACCTTGCATGTC+CGG | + | chr5.4:31928144-31928163 | MS.gene53105:intron | 35.0% | |
| CATATTGAACTTCCAAGTGT+CGG | + | chr5.4:31926143-31926162 | MS.gene53105:CDS | 35.0% | |
| CTCCATTCTTATCTATCTTG+AGG | - | chr5.4:31925394-31925413 | None:intergenic | 35.0% | |
| GACTTTAGACTAAAGTCGTT+AGG | + | chr5.4:31927980-31927999 | MS.gene53105:intron | 35.0% | |
| GATGAGATGGAAAAGGTTAA+AGG | + | chr5.4:31926815-31926834 | MS.gene53105:CDS | 35.0% | |
| GCAATGTGATTTATCTTCCT+TGG | - | chr5.4:31926119-31926138 | None:intergenic | 35.0% | |
| GTTGTGGTTCAAAACCAAAT+GGG | + | chr5.4:31924146-31924165 | MS.gene53105:CDS | 35.0% | |
| TAACCCATATGTTCCAACTT+TGG | - | chr5.4:31924654-31924673 | None:intergenic | 35.0% | |
| TAATGGTAGGAATTTGACCA+TGG | - | chr5.4:31928379-31928398 | None:intergenic | 35.0% | |
| TACTGGAGTAACTGAGTATT+TGG | - | chr5.4:31925311-31925330 | None:intergenic | 35.0% | |
| TCCAGTTTCAACTCAAGAAA+AGG | + | chr5.4:31925813-31925832 | MS.gene53105:CDS | 35.0% | |
| TCCTCAACACCAATTCTTTA+AGG | + | chr5.4:31926976-31926995 | MS.gene53105:CDS | 35.0% | |
| TCTAATGAGCATGTCGTATA+AGG | - | chr5.4:31926711-31926730 | None:intergenic | 35.0% | |
| TGATGTTGGATTAACTATCC+AGG | + | chr5.4:31927836-31927855 | MS.gene53105:CDS | 35.0% | |
| TGGTCAAATTCCTACCATTA+TGG | + | chr5.4:31928379-31928398 | MS.gene53105:CDS | 35.0% | |
| TGTTCCAACTTTGGTAAATC+AGG | - | chr5.4:31924645-31924664 | None:intergenic | 35.0% | |
| TTCAAGGATCAAACTATACC+TGG | - | chr5.4:31927857-31927876 | None:intergenic | 35.0% | |
| TTGACCTGATTTACCAAAGT+TGG | + | chr5.4:31924638-31924657 | MS.gene53105:intron | 35.0% | |
| TTTGTCTTCAAGAGCCATAA+TGG | - | chr5.4:31928396-31928415 | None:intergenic | 35.0% | |
| ! | AAAGGTTAAAGGGTATGCAA+AGG | + | chr5.4:31926826-31926845 | MS.gene53105:CDS | 35.0% |
| ! | ACACTTTTGATCTGAAGAGT+CGG | - | chr5.4:31926534-31926553 | None:intergenic | 35.0% |
| ! | AGTTGATTCAAACCAGCTTA+TGG | - | chr5.4:31927462-31927481 | None:intergenic | 35.0% |
| ! | ATGAGAAGTGAAGGTACATT+TGG | - | chr5.4:31926176-31926195 | None:intergenic | 35.0% |
| ! | CTATTGACTATGTTGAGCAT+TGG | + | chr5.4:31925191-31925210 | MS.gene53105:intron | 35.0% |
| ! | CTTCATCGGTTGAAAATTCT+AGG | + | chr5.4:31926663-31926682 | MS.gene53105:intron | 35.0% |
| ! | TTGACTATGGTATTGAACCT+GGG | - | chr5.4:31924386-31924405 | None:intergenic | 35.0% |
| ! | TTTGACTATGGTATTGAACC+TGG | - | chr5.4:31924387-31924406 | None:intergenic | 35.0% |
| !! | ACCTTAAAGAATTGGTGTTG+AGG | - | chr5.4:31926980-31926999 | None:intergenic | 35.0% |
| !! | ATTGGTTTGACAGAGATTAG+TGG | + | chr5.4:31926790-31926809 | MS.gene53105:intron | 35.0% |
| !! | CAACACCTATTGGTTTGTAA+GGG | - | chr5.4:31926082-31926101 | None:intergenic | 35.0% |
| !! | GAAAGACTCAAAATTTTGGC+TGG | + | chr5.4:31926869-31926888 | MS.gene53105:CDS | 35.0% |
| !! | GTGTTTTCAGGATAAGATCA+AGG | + | chr5.4:31926444-31926463 | MS.gene53105:CDS | 35.0% |
| !! | TCAACACCTATTGGTTTGTA+AGG | - | chr5.4:31926083-31926102 | None:intergenic | 35.0% |
| !!! | ACCGTTTTAGCTATATATCG+AGG | + | chr5.4:31927769-31927788 | MS.gene53105:CDS | 35.0% |
| !!! | GCACTATTCTGTGGTTTTAA+TGG | + | chr5.4:31927305-31927324 | MS.gene53105:intron | 35.0% |
| !!! | GTGATTCGTTGATTTTACAC+TGG | + | chr5.4:31927160-31927179 | MS.gene53105:intron | 35.0% |
| !!! | TGGTAACTTTTTTGCTCCTT+TGG | + | chr5.4:31924417-31924436 | MS.gene53105:intron | 35.0% |
| AAAACCAAATGGGAAGAGCA+AGG | + | chr5.4:31924156-31924175 | MS.gene53105:CDS | 40.0% | |
| AAACCAAATGGGAAGAGCAA+GGG | + | chr5.4:31924157-31924176 | MS.gene53105:CDS | 40.0% | |
| AAACTCGCTTTACCATAAGC+TGG | + | chr5.4:31927447-31927466 | MS.gene53105:intron | 40.0% | |
| AAATTACAGACCAGGAACCA+GGG | - | chr5.4:31925843-31925862 | None:intergenic | 40.0% | |
| AACATGCTAGCAGGATATGT+AGG | - | chr5.4:31926343-31926362 | None:intergenic | 40.0% | |
| AACCACCTTTGTCAAAATCC+AGG | - | chr5.4:31924315-31924334 | None:intergenic | 40.0% | |
| AAGATCGGACAGTTGACATT+CGG | - | chr5.4:31924936-31924955 | None:intergenic | 40.0% | |
| AATCACACGATCTTCAATCC+TGG | + | chr5.4:31924572-31924591 | MS.gene53105:intron | 40.0% | |
| AATGTCGGAATGTGGACATT+TGG | - | chr5.4:31924887-31924906 | None:intergenic | 40.0% | |
| ACCTGAAAAATGTTTCGCTG+CGG | - | chr5.4:31925885-31925904 | None:intergenic | 40.0% | |
| AGATTCAGGGTGCAAATATG+AGG | + | chr5.4:31925352-31925371 | MS.gene53105:CDS | 40.0% | |
| AGCAGGATGAACTTTCATAC+TGG | - | chr5.4:31925328-31925347 | None:intergenic | 40.0% | |
| AGTGGATGATGAGATGGAAA+AGG | + | chr5.4:31926808-31926827 | MS.gene53105:CDS | 40.0% | |
| ATGAACCGTCTGATCAAGAT+CGG | - | chr5.4:31924951-31924970 | None:intergenic | 40.0% | |
| CATCCTGCTATGTAGATTCA+GGG | + | chr5.4:31925339-31925358 | MS.gene53105:CDS | 40.0% | |
| GAAAAACCCTAGTCTCACAT+TGG | - | chr5.4:31928204-31928223 | None:intergenic | 40.0% | |
| GAACTCAGATTAAGGTCTTC+CGG | - | chr5.4:31926905-31926924 | None:intergenic | 40.0% | |
| GATGACTTCAGTAGTGTTCA+TGG | + | chr5.4:31925144-31925163 | MS.gene53105:CDS | 40.0% | |
| GTTGTCGGAGAATTTCGAAA+AGG | + | chr5.4:31926411-31926430 | MS.gene53105:CDS | 40.0% | |
| TATCAGCCAATGTGAGACTA+GGG | + | chr5.4:31928195-31928214 | MS.gene53105:intron | 40.0% | |
| TATCCTGCTAGCATGTTCAT+TGG | + | chr5.4:31926346-31926365 | MS.gene53105:CDS | 40.0% | |
| TCATCCTGCTATGTAGATTC+AGG | + | chr5.4:31925338-31925357 | MS.gene53105:CDS | 40.0% | |
| TCCAGAGTTGCCATTGAAAA+GGG | + | chr5.4:31924237-31924256 | MS.gene53105:CDS | 40.0% | |
| TCGATTAGACAATCCAGATC+GGG | - | chr5.4:31924858-31924877 | None:intergenic | 40.0% | |
| TCTCTGCAGAACTCAGATTA+AGG | - | chr5.4:31926913-31926932 | None:intergenic | 40.0% | |
| TCTTCAAGAGCCATAATGGT+AGG | - | chr5.4:31928392-31928411 | None:intergenic | 40.0% | |
| TGAATTTGATCTGATGCGCT+AGG | + | chr5.4:31924676-31924695 | MS.gene53105:intron | 40.0% | |
| TGAGATTAAAATCTCCCACG+CGG | - | chr5.4:31924279-31924298 | None:intergenic | 40.0% | |
| TGATAACACTAGGGTTCTGT+TGG | + | chr5.4:31927249-31927268 | MS.gene53105:intron | 40.0% | |
| TGTCAAGTTTCATCTTACCC+AGG | + | chr5.4:31924366-31924385 | MS.gene53105:CDS | 40.0% | |
| TTAATCTGAGTTCTGCAGAG+AGG | + | chr5.4:31926912-31926931 | MS.gene53105:CDS | 40.0% | |
| TTATTAATCCCGGACATGCA+AGG | - | chr5.4:31928156-31928175 | None:intergenic | 40.0% | |
| TTCCAGAGTTGCCATTGAAA+AGG | + | chr5.4:31924236-31924255 | MS.gene53105:CDS | 40.0% | |
| TTTACAGGCACAAAAGGAAG+AGG | + | chr5.4:31928298-31928317 | MS.gene53105:intron | 40.0% | |
| TTTGGCTGGAGTAGTTAATC+CGG | + | chr5.4:31926883-31926902 | MS.gene53105:CDS | 40.0% | |
| ! | AAGTTAGCTTCCACCACAAT+GGG | + | chr5.4:31924121-31924140 | MS.gene53105:CDS | 40.0% |
| ! | AGCACTTGTGTACATTTTGC+AGG | + | chr5.4:31925060-31925079 | MS.gene53105:intron | 40.0% |
| ! | AGTATTTGGGACATTTCCCA+TGG | - | chr5.4:31925297-31925316 | None:intergenic | 40.0% |
| ! | ATTTTCAACCGATGAAGCAC+TGG | - | chr5.4:31926660-31926679 | None:intergenic | 40.0% |
| ! | CTTGTTTCTCAAAGAAGCCA+TGG | - | chr5.4:31924760-31924779 | None:intergenic | 40.0% |
| ! | GAGATTAGTGGATGATGAGA+TGG | + | chr5.4:31926802-31926821 | MS.gene53105:intron | 40.0% |
| ! | GCATTGCTAACCCTTTTCAA+TGG | - | chr5.4:31924250-31924269 | None:intergenic | 40.0% |
| ! | TCTCAGTGAATTTGTTCACC+TGG | + | chr5.4:31924294-31924313 | MS.gene53105:CDS | 40.0% |
| ! | TTGAAAAGGGTTAGCAATGC+AGG | + | chr5.4:31924250-31924269 | MS.gene53105:CDS | 40.0% |
| !! | ATGTTCATTGGTGATGCCAA+TGG | + | chr5.4:31926358-31926377 | MS.gene53105:CDS | 40.0% |
| !! | GGATTTTGACAAAGGTGGTT+CGG | + | chr5.4:31924315-31924334 | MS.gene53105:CDS | 40.0% |
| !! | GTTCACCTGGATTTTGACAA+AGG | + | chr5.4:31924307-31924326 | MS.gene53105:CDS | 40.0% |
| !! | TTTTGCAGGAGTATACCAAG+AGG | + | chr5.4:31925074-31925093 | MS.gene53105:intron | 40.0% |
| !!! | GCCTTTTCTTGAGTTGAAAC+TGG | - | chr5.4:31925817-31925836 | None:intergenic | 40.0% |
| AACCTCTGATCTCCTACATG+CGG | - | chr5.4:31924341-31924360 | None:intergenic | 45.0% | |
| AAGAAGCCATGGCAACTCTA+CGG | - | chr5.4:31924749-31924768 | None:intergenic | 45.0% | |
| AAGGGGTTTGCACTATTCTG+TGG | + | chr5.4:31927296-31927315 | MS.gene53105:intron | 45.0% | |
| ACTGTCCGATCTTGATCAGA+CGG | + | chr5.4:31924943-31924962 | MS.gene53105:intron | 45.0% | |
| AGAGCAAGGGTCACAAAAGA+AGG | + | chr5.4:31924170-31924189 | MS.gene53105:CDS | 45.0% | |
| AGCTAAAACGGTGTATGTCG+AGG | - | chr5.4:31927761-31927780 | None:intergenic | 45.0% | |
| AGTCAAACCATGCATCCTCT+TGG | - | chr5.4:31925092-31925111 | None:intergenic | 45.0% | |
| CGATTAGACAATCCAGATCG+GGG | - | chr5.4:31924857-31924876 | None:intergenic | 45.0% | |
| CTATCAGCCAATGTGAGACT+AGG | + | chr5.4:31928194-31928213 | MS.gene53105:intron | 45.0% | |
| CTTCGAGACCGTGTAAAGAA+TGG | + | chr5.4:31927807-31927826 | MS.gene53105:CDS | 45.0% | |
| GAAATTACAGACCAGGAACC+AGG | - | chr5.4:31925844-31925863 | None:intergenic | 45.0% | |
| GACAGTTGACATTCGGACTT+TGG | - | chr5.4:31924929-31924948 | None:intergenic | 45.0% | |
| GACTTCAGTAGTGTTCATGG+AGG | + | chr5.4:31925147-31925166 | MS.gene53105:CDS | 45.0% | |
| GAGTATACCAAGAGGATGCA+TGG | + | chr5.4:31925082-31925101 | MS.gene53105:CDS | 45.0% | |
| GCAGAGGATGCATTGTTTGA+CGG | + | chr5.4:31924812-31924831 | MS.gene53105:intron | 45.0% | |
| GTCGTCAGATCAAGATCAGA+TGG | + | chr5.4:31924594-31924613 | MS.gene53105:intron | 45.0% | |
| GTCTGCCCTTACAAACCAAT+AGG | + | chr5.4:31926074-31926093 | MS.gene53105:CDS | 45.0% | |
| TCACCAATGAACATGCTAGC+AGG | - | chr5.4:31926352-31926371 | None:intergenic | 45.0% | |
| TGAACCACAACTTCCCATTG+TGG | - | chr5.4:31924137-31924156 | None:intergenic | 45.0% | |
| TGAAGGCGAAATTACAGACC+AGG | - | chr5.4:31925851-31925870 | None:intergenic | 45.0% | |
| TGTTTGTGCCAGTGCTTCAT+CGG | + | chr5.4:31926649-31926668 | MS.gene53105:intron | 45.0% | |
| TTCTTTATCGACCGAGAGCA+GGG | + | chr5.4:31925782-31925801 | MS.gene53105:CDS | 45.0% | |
| TTTCTTTATCGACCGAGAGC+AGG | + | chr5.4:31925781-31925800 | MS.gene53105:CDS | 45.0% | |
| TTTGGATGTTCACCGACACT+TGG | - | chr5.4:31926158-31926177 | None:intergenic | 45.0% | |
| ! | ACCCTTTTCAATGGCAACTC+TGG | - | chr5.4:31924241-31924260 | None:intergenic | 45.0% |
| ! | CATAAATCTGGAAAGCGCAG+AGG | + | chr5.4:31924196-31924215 | MS.gene53105:CDS | 45.0% |
| ! | GAAGTTAGCTTCCACCACAA+TGG | + | chr5.4:31924120-31924139 | MS.gene53105:CDS | 45.0% |
| ! | GATTGTTTTCCTTTCGCCAG+CGG | + | chr5.4:31925266-31925285 | MS.gene53105:intron | 45.0% |
| ! | GCACCGACAATTCACATAGA+AGG | + | chr5.4:31925936-31925955 | MS.gene53105:intron | 45.0% |
| ! | TCCGCAGCGAAACATTTTTC+AGG | + | chr5.4:31925881-31925900 | MS.gene53105:CDS | 45.0% |
| !! | ACTCAAGAAAAGGCATTCCC+TGG | + | chr5.4:31925823-31925842 | MS.gene53105:CDS | 45.0% |
| !! | ATTGGTGATGCCAATGGAGA+AGG | + | chr5.4:31926364-31926383 | MS.gene53105:CDS | 45.0% |
| !! | CACCTGGATTTTGACAAAGG+TGG | + | chr5.4:31924310-31924329 | MS.gene53105:CDS | 45.0% |
| !!! | ATTTTAAGAAAAAATTATAT+TGG | + | chr5.4:31926772-31926791 | MS.gene53105:intron | 5.0% |
| AAGCAGCACAACACTTGCTC+AGG | - | chr5.4:31928329-31928348 | None:intergenic | 50.0% | |
| AAGGCTCAAGCCTTCTCCAT+TGG | - | chr5.4:31926377-31926396 | None:intergenic | 50.0% | |
| ACCACAACTTCCCATTGTGG+TGG | - | chr5.4:31924134-31924153 | None:intergenic | 50.0% | |
| CTGATCTTGATCTGACGACC+AGG | - | chr5.4:31924593-31924612 | None:intergenic | 50.0% | |
| GCACCCTGAATCTACATAGC+AGG | - | chr5.4:31925345-31925364 | None:intergenic | 50.0% | |
| GGAACTTGAATCCCTGCTCT+CGG | - | chr5.4:31925796-31925815 | None:intergenic | 50.0% | |
| GGTTTGTAAGGGCAGACATC+TGG | - | chr5.4:31926071-31926090 | None:intergenic | 50.0% | |
| TCCACCACAATGGGAAGTTG+TGG | + | chr5.4:31924130-31924149 | MS.gene53105:CDS | 50.0% | |
| TGACCCTTGCTCTTCCCATT+TGG | - | chr5.4:31924163-31924182 | None:intergenic | 50.0% | |
| ! | GGAGATCTCACCGTGTTTTC+AGG | + | chr5.4:31926432-31926451 | MS.gene53105:CDS | 50.0% |
| !! | AAAAGGCATTCCCTGGTTCC+TGG | + | chr5.4:31925830-31925849 | MS.gene53105:CDS | 50.0% |
| AAGCCATGGCAACTCTACGG+CGG | - | chr5.4:31924746-31924765 | None:intergenic | 55.0% | |
| AATCCGCCGTAGAGTTGCCA+TGG | + | chr5.4:31924740-31924759 | MS.gene53105:intron | 55.0% | |
| AGCAATGCAGGAAACCGCGT+GGG | + | chr5.4:31924262-31924281 | MS.gene53105:CDS | 55.0% | |
| CTGCGGAGCTTGAACACTGA+AGG | - | chr5.4:31925868-31925887 | None:intergenic | 55.0% | |
| GTGTTGAGGACGCGAAAGCA+CGG | - | chr5.4:31926966-31926985 | None:intergenic | 55.0% | |
| TAGCAATGCAGGAAACCGCG+TGG | + | chr5.4:31924261-31924280 | MS.gene53105:CDS | 55.0% | |
| ! | TAAGGGCAGACATCTGGAGC+AGG | - | chr5.4:31926065-31926084 | None:intergenic | 55.0% |
| ! | TGTTGAGGACGCGAAAGCAC+GGG | - | chr5.4:31926965-31926984 | None:intergenic | 55.0% |
| ATTTCCCATGGCGTTGCCGC+TGG | - | chr5.4:31925285-31925304 | None:intergenic | 60.0% | |
| CAATCACGCAGTCCCCGATC+TGG | + | chr5.4:31924842-31924861 | MS.gene53105:intron | 60.0% | |
| GGCCGCATGTAGGAGATCAG+AGG | + | chr5.4:31924336-31924355 | MS.gene53105:CDS | 60.0% | |
| ! | AAGGTGGTTCGGCCGCATGT+AGG | + | chr5.4:31924326-31924345 | MS.gene53105:CDS | 60.0% |
| ! | TGGCAACTCTGGAAGCGCAG+AGG | - | chr5.4:31924230-31924249 | None:intergenic | 60.0% |
| ATGGCGTTGCCGCTGGCGAA+AGG | - | chr5.4:31925278-31925297 | None:intergenic | 65.0% | |
| TTCGCCAGCGGCAACGCCAT+GGG | + | chr5.4:31925278-31925297 | MS.gene53105:CDS | 65.0% | |
| TTTCGCCAGCGGCAACGCCA+TGG | + | chr5.4:31925277-31925296 | MS.gene53105:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 31924100 | 31928418 | 31924100 | ID=MS.gene53105 |
| chr5.4 | mRNA | 31924100 | 31928418 | 31924100 | ID=MS.gene53105.t1;Parent=MS.gene53105 |
| chr5.4 | exon | 31924100 | 31924418 | 31924100 | ID=MS.gene53105.t1.exon1;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31924100 | 31924418 | 31924100 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31925082 | 31925168 | 31925082 | ID=MS.gene53105.t1.exon2;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31925082 | 31925168 | 31925082 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31925267 | 31925506 | 31925267 | ID=MS.gene53105.t1.exon3;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31925267 | 31925506 | 31925267 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31925767 | 31925902 | 31925767 | ID=MS.gene53105.t1.exon4;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31925767 | 31925902 | 31925767 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31926046 | 31926208 | 31926046 | ID=MS.gene53105.t1.exon5;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31926046 | 31926208 | 31926046 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31926337 | 31926465 | 31926337 | ID=MS.gene53105.t1.exon6;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31926337 | 31926465 | 31926337 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31926803 | 31926997 | 31926803 | ID=MS.gene53105.t1.exon7;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31926803 | 31926997 | 31926803 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31927735 | 31927857 | 31927735 | ID=MS.gene53105.t1.exon8;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31927735 | 31927857 | 31927735 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| chr5.4 | exon | 31928305 | 31928418 | 31928305 | ID=MS.gene53105.t1.exon9;Parent=MS.gene53105.t1 |
| chr5.4 | CDS | 31928305 | 31928418 | 31928305 | ID=cds.MS.gene53105.t1;Parent=MS.gene53105.t1 |
| Gene Sequence |
| Protein sequence |
