Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53202.t1 | XP_003614060.2 | 95.9 | 491 | 20 | 0 | 1 | 491 | 114 | 604 | 2.60E-271 | 944.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53202.t1 | Q9FZD1 | 64.3 | 488 | 173 | 1 | 1 | 487 | 136 | 623 | 1.8e-185 | 650.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53202.t1 | G7JWU3 | 95.9 | 491 | 20 | 0 | 1 | 491 | 114 | 604 | 1.8e-271 | 944.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53202 | MS.gene35108 | PPI |
| MS.gene064542 | MS.gene53202 | PPI |
| MS.gene36441 | MS.gene53202 | PPI |
| MS.gene53202 | MS.gene28721 | PPI |
| MS.gene35110 | MS.gene53202 | PPI |
| MS.gene028350 | MS.gene53202 | PPI |
| MS.gene73119 | MS.gene53202 | PPI |
| MS.gene035805 | MS.gene53202 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53202.t1 | MTR_5g044270 | 95.927 | 491 | 20 | 0 | 1 | 491 | 114 | 604 | 0.0 | 977 |
| MS.gene53202.t1 | MTR_6g024415 | 94.495 | 109 | 6 | 0 | 174 | 282 | 3 | 111 | 2.03e-65 | 209 |
| MS.gene53202.t1 | MTR_1g009040 | 80.000 | 45 | 9 | 0 | 1 | 45 | 89 | 133 | 5.44e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53202.t1 | AT1G26460 | 64.344 | 488 | 173 | 1 | 1 | 487 | 136 | 623 | 0.0 | 675 |
| MS.gene53202.t1 | AT3G53700 | 23.239 | 426 | 292 | 11 | 17 | 441 | 151 | 542 | 3.11e-14 | 75.9 |
Find 109 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCAATTGTTTCTACTTT+TGG | 0.135748 | 5.4:-33790391 | MS.gene53202:CDS |
| ATTTGTTTAATCATTATATT+AGG | 0.156430 | 5.4:-33793642 | MS.gene53202:CDS |
| CTATTATGGCCTGGAGTTTA+TGG | 0.184716 | 5.4:-33791178 | MS.gene53202:CDS |
| TGAAGGATGGGTTAGGAGTT+TGG | 0.215682 | 5.4:-33793698 | MS.gene53202:CDS |
| AGGAGCAGCATGGGCTGTTT+TGG | 0.238246 | 5.4:-33791040 | MS.gene53202:CDS |
| ATTTGACATCCCGGTTAATT+AGG | 0.242871 | 5.4:+33788938 | None:intergenic |
| AAATTAACATCAGGTTTATT+AGG | 0.243041 | 5.4:+33793661 | None:intergenic |
| AATGGATGTAAAGAAGTAAA+TGG | 0.243768 | 5.4:+33790856 | None:intergenic |
| TTTGAGCATGCAACAGATAA+TGG | 0.279170 | 5.4:+33790838 | None:intergenic |
| TCCTAGCAGCTCAGAATTAT+AGG | 0.283390 | 5.4:+33791059 | None:intergenic |
| CATAGCAAGTTAGCCTATTA+TGG | 0.298729 | 5.4:-33791192 | MS.gene53202:CDS |
| CATGAAGTTTCAAAGGTGTT+TGG | 0.302449 | 5.4:-33789024 | MS.gene53202:CDS |
| CATAAACTCCAGGCCATAAT+AGG | 0.307963 | 5.4:+33791179 | None:intergenic |
| CATGATTATGAGCAAGCTTA+TGG | 0.308715 | 5.4:-33790913 | MS.gene53202:CDS |
| GCGAGATAAGATTCTGGATT+TGG | 0.315401 | 5.4:+33790991 | None:intergenic |
| AAACAATTGATTCAAAAGTT+TGG | 0.321687 | 5.4:+33790401 | None:intergenic |
| ATCTTTGCGAGATAAGATTC+TGG | 0.329322 | 5.4:+33790985 | None:intergenic |
| TATGAAAATGCACAATTTCC+AGG | 0.338364 | 5.4:+33791239 | None:intergenic |
| GATATATGCCCTTGCATCAT+TGG | 0.349384 | 5.4:-33790965 | MS.gene53202:CDS |
| GCGCTAAACTGTATCATTGT+AGG | 0.358136 | 5.4:-33790457 | MS.gene53202:CDS |
| CCATTGTGCGAATGAATATT+AGG | 0.358922 | 5.4:+33790361 | None:intergenic |
| GAATCATTTGACTTGGTCAT+TGG | 0.359618 | 5.4:-33791555 | MS.gene53202:CDS |
| AGGCAATATGACTTTGCATT+AGG | 0.364167 | 5.4:+33788976 | None:intergenic |
| ATTAGGGCTAATCTTATGAT+TGG | 0.367116 | 5.4:-33793625 | MS.gene53202:CDS |
| AAATTAAAACTCGCTGTATT+CGG | 0.367896 | 5.4:+33793544 | None:intergenic |
| AGCAAGATCCATCACCTTAT+TGG | 0.368713 | 5.4:+33790315 | None:intergenic |
| TATGGGAGTGCTTGATGATA+TGG | 0.373361 | 5.4:-33788911 | MS.gene53202:intron |
| ATGAAGTTTCAAAGGTGTTT+GGG | 0.375710 | 5.4:-33789023 | MS.gene53202:CDS |
| TGCATTTGGGAAGGCCAATA+AGG | 0.377932 | 5.4:-33790329 | MS.gene53202:intron |
| ACAAAGCTCTTTGCCCCTCC+TGG | 0.381258 | 5.4:-33791257 | MS.gene53202:CDS |
| TTGTAGGATCTGCGAACATA+TGG | 0.381386 | 5.4:-33790441 | MS.gene53202:CDS |
| GTTTGGGCACATAGTAGGTT+CGG | 0.383884 | 5.4:-33789007 | MS.gene53202:CDS |
| TTTGTTTAATCATTATATTA+GGG | 0.392061 | 5.4:-33793641 | MS.gene53202:CDS |
| GCTTGATTTGTTAGCTCAGA+TGG | 0.397920 | 5.4:-33793584 | MS.gene53202:CDS |
| TCGATGCCCACCTAATTAAC+CGG | 0.398236 | 5.4:-33788948 | MS.gene53202:CDS |
| TCTTAATTACAGTACTGAAA+TGG | 0.406262 | 5.4:-33788646 | MS.gene53202:CDS |
| CACTGAAAGCGATGAACGAC+TGG | 0.406939 | 5.4:-33788733 | MS.gene53202:CDS |
| GGTTCTTAAGGCTATGCATC+AGG | 0.418948 | 5.4:-33793521 | MS.gene53202:CDS |
| AAGTCAAATGATTCATCATC+AGG | 0.420113 | 5.4:+33791564 | None:intergenic |
| AATGGGCTGATGTATGCATT+TGG | 0.421515 | 5.4:-33790343 | MS.gene53202:CDS |
| ATTTATTTGCAGATTGCTGC+TGG | 0.422223 | 5.4:-33788816 | MS.gene53202:intron |
| GGCCATCTACAAAAGGCATT+TGG | 0.424516 | 5.4:-33790943 | MS.gene53202:CDS |
| ATCTGTTGCATGCTCAAAGA+AGG | 0.425706 | 5.4:-33790833 | MS.gene53202:CDS |
| ATGGATGTAAAGAAGTAAAT+GGG | 0.436831 | 5.4:+33790857 | None:intergenic |
| CTAATATTCATTCGCACAAT+GGG | 0.441539 | 5.4:-33790360 | MS.gene53202:CDS |
| GTTATCAGGATGCTACAATC+TGG | 0.442097 | 5.4:-33791600 | MS.gene53202:intron |
| ATATATGCCCTTGCATCATT+GGG | 0.454900 | 5.4:-33790964 | MS.gene53202:CDS |
| AAATGTTTGAAGGATGGGTT+AGG | 0.459710 | 5.4:-33793705 | MS.gene53202:CDS |
| TTTGGGCACATAGTAGGTTC+GGG | 0.463474 | 5.4:-33789006 | MS.gene53202:CDS |
| GATTAAACAGCATGTTTCGT+CGG | 0.463811 | 5.4:+33788667 | None:intergenic |
| GTGTTGCTTTCTGTAGATGA+AGG | 0.465158 | 5.4:-33791117 | MS.gene53202:CDS |
| ATGGCTCGATGGATTGTAAA+GGG | 0.468300 | 5.4:-33791159 | MS.gene53202:CDS |
| TGATTAAACAAATTAACATC+AGG | 0.470842 | 5.4:+33793652 | None:intergenic |
| CCGGGATGTCAAATCTGCTA+TGG | 0.480468 | 5.4:-33788929 | MS.gene53202:CDS |
| AGCGCAGCAACAGACTTGTA+TGG | 0.481918 | 5.4:+33790475 | None:intergenic |
| ATTAAACAGCATGTTTCGTC+GGG | 0.488375 | 5.4:+33788668 | None:intergenic |
| ATGGGCTGATGTATGCATTT+GGG | 0.492973 | 5.4:-33790342 | MS.gene53202:CDS |
| TGAAGGAAATGTTTGAAGGA+TGG | 0.497761 | 5.4:-33793711 | None:intergenic |
| AAGGTGTTTGGGCACATAGT+AGG | 0.499072 | 5.4:-33789012 | MS.gene53202:CDS |
| CCTAATATTCATTCGCACAA+TGG | 0.508619 | 5.4:-33790361 | MS.gene53202:CDS |
| TTAGGTGGGCATCGATAAGC+AGG | 0.512991 | 5.4:+33788956 | None:intergenic |
| ACAAGGTAGGCTTGATACAT+TGG | 0.516589 | 5.4:-33791415 | MS.gene53202:CDS |
| CTGGATTTGAACCGATGAAA+GGG | 0.520906 | 5.4:-33788797 | MS.gene53202:CDS |
| CGATCTTACAATTACCGACT+GGG | 0.521338 | 5.4:-33788699 | MS.gene53202:CDS |
| ATCATTGGGCCATCTACAAA+AGG | 0.524550 | 5.4:-33790950 | MS.gene53202:CDS |
| TCGATCTTACAATTACCGAC+TGG | 0.528169 | 5.4:-33788700 | MS.gene53202:CDS |
| AAGTTTGGTAAGCTCGATCA+AGG | 0.529861 | 5.4:+33790416 | None:intergenic |
| GCAGACACATGAAGTTTCAA+AGG | 0.536452 | 5.4:-33789031 | MS.gene53202:intron |
| CAAGTTAGCCTATTATGGCC+TGG | 0.537721 | 5.4:-33791187 | MS.gene53202:CDS |
| TGACATCCCGGTTAATTAGG+TGG | 0.538340 | 5.4:+33788941 | None:intergenic |
| GTGTCAGCTCTGATGACTGC+AGG | 0.542612 | 5.4:-33791087 | MS.gene53202:CDS |
| GACATCCCGGTTAATTAGGT+GGG | 0.542766 | 5.4:+33788942 | None:intergenic |
| CGGGATGTCAAATCTGCTAT+GGG | 0.544855 | 5.4:-33788928 | MS.gene53202:CDS |
| TGGCAATAATTGAAAAGTGC+AGG | 0.545019 | 5.4:-33791392 | MS.gene53202:CDS |
| GATGTGAAGGAAATGTTTGA+AGG | 0.554620 | 5.4:-33793715 | None:intergenic |
| TCTGTTGCATGCTCAAAGAA+GGG | 0.556751 | 5.4:-33790832 | MS.gene53202:CDS |
| CTGAGCTGCTAGGAGCAGCA+TGG | 0.557087 | 5.4:-33791050 | MS.gene53202:CDS |
| TATGGCTCGATGGATTGTAA+AGG | 0.558390 | 5.4:-33791160 | MS.gene53202:CDS |
| GCCTGGAGTTTATGGCTCGA+TGG | 0.561213 | 5.4:-33791170 | MS.gene53202:CDS |
| TGATGATGAATCATTTGACT+TGG | 0.565954 | 5.4:-33791562 | MS.gene53202:CDS |
| TGAGCTGCTAGGAGCAGCAT+GGG | 0.569572 | 5.4:-33791049 | MS.gene53202:CDS |
| TCCATCGAGCCATAAACTCC+AGG | 0.571109 | 5.4:+33791169 | None:intergenic |
| TGTAGGATCTGCGAACATAT+GGG | 0.572027 | 5.4:-33790440 | MS.gene53202:CDS |
| GAAGGAAATGTTTGAAGGAT+GGG | 0.576137 | 5.4:-33793710 | None:intergenic |
| CGATGCCCACCTAATTAACC+GGG | 0.577594 | 5.4:-33788947 | MS.gene53202:CDS |
| CTGCTGAGAAGCTTCTTGAA+CGG | 0.580362 | 5.4:-33793483 | MS.gene53202:intron |
| GTAGATGGCCCAATGATGCA+AGG | 0.582438 | 5.4:+33790956 | None:intergenic |
| ACCTATAATTCTGAGCTGCT+AGG | 0.584992 | 5.4:-33791060 | MS.gene53202:CDS |
| GCTGGATTTGAACCGATGAA+AGG | 0.589035 | 5.4:-33788798 | MS.gene53202:CDS |
| CTTAAGGCTATGCATCAGGC+TGG | 0.602664 | 5.4:-33793517 | MS.gene53202:CDS |
| AAAATGCACAATTTCCAGGA+GGG | 0.604881 | 5.4:+33791243 | None:intergenic |
| AGGTAGGCTTGATACATTGG+TGG | 0.606481 | 5.4:-33791412 | MS.gene53202:CDS |
| AAATGCACAATTTCCAGGAG+GGG | 0.611198 | 5.4:+33791244 | None:intergenic |
| ACATGGTAACACGTTGTCAG+TGG | 0.611871 | 5.4:-33791472 | MS.gene53202:CDS |
| CCATAGCAGATTTGACATCC+CGG | 0.613360 | 5.4:+33788929 | None:intergenic |
| TGCAGTCATCAGAGCTGACA+CGG | 0.624877 | 5.4:+33791089 | None:intergenic |
| GGAGTTGTGTCAAACAAGGT+AGG | 0.631140 | 5.4:-33791428 | MS.gene53202:CDS |
| TAGATGGCCCAATGATGCAA+GGG | 0.631417 | 5.4:+33790957 | None:intergenic |
| GTCGGGCTTCAGAACCCAGT+CGG | 0.633224 | 5.4:+33788685 | None:intergenic |
| AGCTGAAGTTGCAATTCGAG+CGG | 0.642238 | 5.4:-33791217 | MS.gene53202:CDS |
| TCATCTACAGAAAGCAACAC+AGG | 0.661970 | 5.4:+33791120 | None:intergenic |
| GGCAATAATTGAAAAGTGCA+GGG | 0.665279 | 5.4:-33791391 | MS.gene53202:intron |
| ATAGATTCAACTCTAAAACA+TGG | 0.670661 | 5.4:-33791489 | MS.gene53202:CDS |
| ATTTATTTATGAAATGTGTG+AGG | 0.693600 | 5.4:-33791449 | MS.gene53202:CDS |
| GTGAGGAGTTGTGTCAAACA+AGG | 0.699166 | 5.4:-33791432 | MS.gene53202:CDS |
| GCTGATGTATGCATTTGGGA+AGG | 0.709918 | 5.4:-33790338 | MS.gene53202:CDS |
| GAAAATGCACAATTTCCAGG+AGG | 0.712171 | 5.4:+33791242 | None:intergenic |
| TCTACAGAAAGCAACACAGG+AGG | 0.717369 | 5.4:+33791123 | None:intergenic |
| ACTTGTATGGACGCTCAGCA+CGG | 0.719022 | 5.4:+33790488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTTTAATCATTATATT+AGG | - | chr5.4:33788702-33788721 | MS.gene53202:CDS | 10.0% |
| !! | TTTGTTTAATCATTATATTA+GGG | - | chr5.4:33788703-33788722 | MS.gene53202:CDS | 10.0% |
| !! | AAAATAATAACAAATCCTAA+AGG | + | chr5.4:33791601-33791620 | None:intergenic | 15.0% |
| !! | AAACTGTATATATAGAATAT+TGG | + | chr5.4:33792727-33792746 | None:intergenic | 15.0% |
| !! | AAGTAGTAATAAGTAATTAA+TGG | + | chr5.4:33793280-33793299 | None:intergenic | 15.0% |
| !! | CAATAATAATAATAAAAGGT+AGG | + | chr5.4:33790575-33790594 | None:intergenic | 15.0% |
| !! | GAAATAATATGTATTACAAA+AGG | - | chr5.4:33792974-33792993 | MS.gene53202:intron | 15.0% |
| !! | GAGTTCATTTATAAATTATT+TGG | + | chr5.4:33789789-33789808 | None:intergenic | 15.0% |
| !! | TAAATTATTTAAAAACGCTT+AGG | + | chr5.4:33789672-33789691 | None:intergenic | 15.0% |
| !! | TCTCCAATAATAATAATAAA+AGG | + | chr5.4:33790579-33790598 | None:intergenic | 15.0% |
| !! | TTGTAAGAAAATATATATTC+AGG | + | chr5.4:33791701-33791720 | None:intergenic | 15.0% |
| !!! | AAAGTATTTTCAGTTTTATA+GGG | - | chr5.4:33790072-33790091 | MS.gene53202:intron | 15.0% |
| !!! | AATCATGTTATTTTCTATTT+AGG | - | chr5.4:33791808-33791827 | MS.gene53202:intron | 15.0% |
| !!! | CTACCTTTTATTATTATTAT+TGG | - | chr5.4:33790573-33790592 | MS.gene53202:intron | 15.0% |
| !!! | TTGTTGATTTCATAAATAAT+AGG | - | chr5.4:33790031-33790050 | MS.gene53202:intron | 15.0% |
| !! | AAATAGTTTAGTTAGTGTTA+TGG | + | chr5.4:33790147-33790166 | None:intergenic | 20.0% |
| !! | AAATTAACATCAGGTTTATT+AGG | + | chr5.4:33788686-33788705 | None:intergenic | 20.0% |
| !! | AATATGAATAACTTTGACAT+TGG | + | chr5.4:33790637-33790656 | None:intergenic | 20.0% |
| !! | AATGTTAAAAGAATAGTTGA+TGG | - | chr5.4:33790116-33790135 | MS.gene53202:intron | 20.0% |
| !! | ACAAGACGTAAAATAAATTA+TGG | + | chr5.4:33789468-33789487 | None:intergenic | 20.0% |
| !! | ACCAAAATACTAATCAAATA+GGG | + | chr5.4:33789850-33789869 | None:intergenic | 20.0% |
| !! | ATGTTAAAAGAATAGTTGAT+GGG | - | chr5.4:33790117-33790136 | MS.gene53202:intron | 20.0% |
| !! | ATTTATTTATGAAATGTGTG+AGG | - | chr5.4:33790895-33790914 | MS.gene53202:CDS | 20.0% |
| !! | CAAAATAATTTCTCAAGATT+TGG | - | chr5.4:33790190-33790209 | MS.gene53202:intron | 20.0% |
| !! | CAAGACGTAAAATAAATTAT+GGG | + | chr5.4:33789467-33789486 | None:intergenic | 20.0% |
| !! | TATTATTTACAAGTTTCTGT+TGG | - | chr5.4:33791635-33791654 | MS.gene53202:intron | 20.0% |
| !! | TGATTAAACAAATTAACATC+AGG | + | chr5.4:33788695-33788714 | None:intergenic | 20.0% |
| !! | TTACTACTTCAATTATCATT+TGG | - | chr5.4:33793291-33793310 | MS.gene53202:intron | 20.0% |
| !! | TTATTGAGTTAATAAGAGTT+AGG | + | chr5.4:33792681-33792700 | None:intergenic | 20.0% |
| !! | TTATTTATATGTGTGTGTAA+AGG | - | chr5.4:33789729-33789748 | MS.gene53202:intron | 20.0% |
| !!! | AAACAATTGATTCAAAAGTT+TGG | + | chr5.4:33791946-33791965 | None:intergenic | 20.0% |
| !!! | AAGAAAAATTTTGACATTGT+TGG | - | chr5.4:33792863-33792882 | MS.gene53202:intron | 20.0% |
| !!! | AATAGCTTTAAAGTTAAAGA+GGG | + | chr5.4:33793005-33793024 | None:intergenic | 20.0% |
| !!! | AATCAATTGTTTCTACTTTT+GGG | - | chr5.4:33791954-33791973 | MS.gene53202:intron | 20.0% |
| !!! | GAAAGTATTTTCAGTTTTAT+AGG | - | chr5.4:33790071-33790090 | MS.gene53202:intron | 20.0% |
| !!! | TAAGAGTGATAACTTTAAAA+TGG | - | chr5.4:33790311-33790330 | MS.gene53202:intron | 20.0% |
| !!! | TATTTAGGTTTATTTTCAAC+TGG | - | chr5.4:33791823-33791842 | MS.gene53202:intron | 20.0% |
| !!! | TTTAGAATCTTATTGAGTAA+GGG | - | chr5.4:33788974-33788993 | MS.gene53202:CDS | 20.0% |
| ! | AAATTAAAACTCGCTGTATT+CGG | + | chr5.4:33788803-33788822 | None:intergenic | 25.0% |
| ! | AATAACAAATCCTAAAGGTT+AGG | + | chr5.4:33791596-33791615 | None:intergenic | 25.0% |
| ! | AATGGATGTAAAGAAGTAAA+TGG | + | chr5.4:33791491-33791510 | None:intergenic | 25.0% |
| ! | AATTATGGAACTAATGAGAA+TGG | + | chr5.4:33792088-33792107 | None:intergenic | 25.0% |
| ! | ATAAGTTTAGTGAGATTGTT+TGG | + | chr5.4:33789407-33789426 | None:intergenic | 25.0% |
| ! | ATAGGAAAATTAACTGTGAT+TGG | - | chr5.4:33790049-33790068 | MS.gene53202:intron | 25.0% |
| ! | ATGAAAAGAATTTCACAAAC+TGG | - | chr5.4:33792382-33792401 | MS.gene53202:intron | 25.0% |
| ! | ATGGATGTAAAGAAGTAAAT+GGG | + | chr5.4:33791490-33791509 | None:intergenic | 25.0% |
| ! | ATTATGGAACTAATGAGAAT+GGG | + | chr5.4:33792087-33792106 | None:intergenic | 25.0% |
| ! | ATTGAAAGAATTTCCAAAAC+TGG | - | chr5.4:33792228-33792247 | MS.gene53202:intron | 25.0% |
| ! | GACCAAAATACTAATCAAAT+AGG | + | chr5.4:33789851-33789870 | None:intergenic | 25.0% |
| ! | GTAATTTCATGTTTAATTCC+CGG | - | chr5.4:33790333-33790352 | MS.gene53202:CDS | 25.0% |
| ! | TAAGTTTAGTGAGATTGTTT+GGG | + | chr5.4:33789406-33789425 | None:intergenic | 25.0% |
| ! | TAGCACATAAAAATAAAAGC+AGG | + | chr5.4:33793235-33793254 | None:intergenic | 25.0% |
| ! | TGAAAAGAATTTCACAAACT+GGG | - | chr5.4:33792383-33792402 | MS.gene53202:intron | 25.0% |
| ! | TTAGGAGTTTGGATAAAAAT+GGG | - | chr5.4:33788657-33788676 | MS.gene53202:CDS | 25.0% |
| ! | TTATTGAGTAAGGGATTATT+TGG | - | chr5.4:33788983-33789002 | MS.gene53202:CDS | 25.0% |
| ! | TTCTTCCCTTCTTTAAATTT+GGG | + | chr5.4:33792939-33792958 | None:intergenic | 25.0% |
| ! | TTGAAAGAATTTCCAAAACT+GGG | - | chr5.4:33792229-33792248 | MS.gene53202:intron | 25.0% |
| ! | TTTATTGCATAAGATGATAG+AGG | - | chr5.4:33792894-33792913 | MS.gene53202:intron | 25.0% |
| ! | TTTCTTCCCTTCTTTAAATT+TGG | + | chr5.4:33792940-33792959 | None:intergenic | 25.0% |
| !! | AAATCATCTAGCTTATCATA+TGG | + | chr5.4:33789906-33789925 | None:intergenic | 25.0% |
| !! | ACCCTATTTGATTAGTATTT+TGG | - | chr5.4:33789846-33789865 | MS.gene53202:intron | 25.0% |
| !! | ATTGACTTAGTAGAGTTTAT+TGG | - | chr5.4:33789006-33789025 | MS.gene53202:CDS | 25.0% |
| !! | CAAGATTTGGTTAATCTTAA+CGG | - | chr5.4:33790203-33790222 | MS.gene53202:intron | 25.0% |
| !! | GATTTTAAATAGCTCACAAT+TGG | + | chr5.4:33792647-33792666 | None:intergenic | 25.0% |
| !! | GTTTAGAATCTTATTGAGTA+AGG | - | chr5.4:33788973-33788992 | MS.gene53202:CDS | 25.0% |
| !! | TCTTAATTACAGTACTGAAA+TGG | - | chr5.4:33793698-33793717 | MS.gene53202:CDS | 25.0% |
| !! | TTGTGGATTGAATATAGAAT+CGG | - | chr5.4:33788919-33788938 | MS.gene53202:CDS | 25.0% |
| !!! | ATAGATTCAACTCTAAAACA+TGG | - | chr5.4:33790855-33790874 | MS.gene53202:CDS | 25.0% |
| !!! | ATCAACAATTACTTTGAAAC+TGG | + | chr5.4:33790019-33790038 | None:intergenic | 25.0% |
| !!! | CAATAGCTTTAAAGTTAAAG+AGG | + | chr5.4:33793006-33793025 | None:intergenic | 25.0% |
| !!! | GAATCAATTGTTTCTACTTT+TGG | - | chr5.4:33791953-33791972 | MS.gene53202:intron | 25.0% |
| !!! | GAGTTTTAATTTGGTTCTTA+AGG | - | chr5.4:33788811-33788830 | MS.gene53202:intron | 25.0% |
| !!! | GTGTTATGAGTTTTTTTTAG+AGG | - | chr5.4:33789696-33789715 | MS.gene53202:intron | 25.0% |
| !!! | TATTTTTATGTGCTACAGAA+GGG | - | chr5.4:33793240-33793259 | MS.gene53202:intron | 25.0% |
| !!! | TTAGTATTTTGGTCTGTAAT+TGG | - | chr5.4:33789857-33789876 | MS.gene53202:intron | 25.0% |
| !!! | TTATTTTTATGTGCTACAGA+AGG | - | chr5.4:33793239-33793258 | MS.gene53202:intron | 25.0% |
| !!! | TTTCAGTTTTATAGGGAAAA+TGG | - | chr5.4:33790079-33790098 | MS.gene53202:intron | 25.0% |
| AAAACAAAAGTTCCTAACAG+GGG | + | chr5.4:33792357-33792376 | None:intergenic | 30.0% | |
| AAGCAAAACTCCATTTAAAG+TGG | + | chr5.4:33790505-33790524 | None:intergenic | 30.0% | |
| AAGTCAAATGATTCATCATC+AGG | + | chr5.4:33790783-33790802 | None:intergenic | 30.0% | |
| AATTATGGGAGAATTTCGTA+TGG | + | chr5.4:33793139-33793158 | None:intergenic | 30.0% | |
| ATAAGTTTAGTGAGACTGTT+TGG | + | chr5.4:33789345-33789364 | None:intergenic | 30.0% | |
| ATACCATAAAACTAGCTACA+GGG | + | chr5.4:33789967-33789986 | None:intergenic | 30.0% | |
| ATTAGGGCTAATCTTATGAT+TGG | - | chr5.4:33788719-33788738 | MS.gene53202:CDS | 30.0% | |
| ATTATGGGAGAATTTCGTAT+GGG | + | chr5.4:33793138-33793157 | None:intergenic | 30.0% | |
| CAAAACAAAAGTTCCTAACA+GGG | + | chr5.4:33792358-33792377 | None:intergenic | 30.0% | |
| CAAATAAATTTGTCGTGCAA+AGG | - | chr5.4:33793490-33793509 | MS.gene53202:CDS | 30.0% | |
| CAAGTTACATGTGTAATTCA+AGG | + | chr5.4:33791784-33791803 | None:intergenic | 30.0% | |
| CAGAAAGATTGTGTAAGAAA+AGG | + | chr5.4:33792064-33792083 | None:intergenic | 30.0% | |
| CATCAATTGAATTGGGTAAT+AGG | - | chr5.4:33792493-33792512 | MS.gene53202:intron | 30.0% | |
| CTAATATTCATTCGCACAAT+GGG | - | chr5.4:33791984-33792003 | MS.gene53202:intron | 30.0% | |
| CTATTACCCAATTCAATTGA+TGG | + | chr5.4:33792495-33792514 | None:intergenic | 30.0% | |
| CTTTCACCATCAATTGAATT+GGG | - | chr5.4:33792486-33792505 | MS.gene53202:intron | 30.0% | |
| GTTAGGAGTTTGGATAAAAA+TGG | - | chr5.4:33788656-33788675 | MS.gene53202:CDS | 30.0% | |
| TAAAAAAAGAGTCAGAAAGC+AGG | + | chr5.4:33793198-33793217 | None:intergenic | 30.0% | |
| TAAGTTTAGTGAGACTGTTT+GGG | + | chr5.4:33789344-33789363 | None:intergenic | 30.0% | |
| TACAAGTTTCTGTTGGAAAT+AGG | - | chr5.4:33791642-33791661 | MS.gene53202:intron | 30.0% | |
| TATGAAAATGCACAATTTCC+AGG | + | chr5.4:33791108-33791127 | None:intergenic | 30.0% | |
| TCTTTCACCATCAATTGAAT+TGG | - | chr5.4:33792485-33792504 | MS.gene53202:intron | 30.0% | |
| TTGGACCCAAATTTAAAGAA+GGG | - | chr5.4:33792931-33792950 | MS.gene53202:intron | 30.0% | |
| TTTGTAAAAACCAAGCCTAT+AGG | + | chr5.4:33790472-33790491 | None:intergenic | 30.0% | |
| ! | AAGACACGGATTATAATGAA+AGG | + | chr5.4:33790231-33790250 | None:intergenic | 30.0% |
| ! | ATTTTCAGTTAGAACCTTGT+AGG | + | chr5.4:33793065-33793084 | None:intergenic | 30.0% |
| ! | GAATAACTTTGACATTGGTT+TGG | + | chr5.4:33790632-33790651 | None:intergenic | 30.0% |
| ! | TGATGATGAATCATTTGACT+TGG | - | chr5.4:33790782-33790801 | MS.gene53202:intron | 30.0% |
| ! | TGTGGATTGAATATAGAATC+GGG | - | chr5.4:33788920-33788939 | MS.gene53202:CDS | 30.0% |
| !! | ATAGGCTTGGTTTTTACAAA+GGG | - | chr5.4:33790472-33790491 | MS.gene53202:CDS | 30.0% |
| !! | ATGAAGTTTCAAAGGTGTTT+GGG | - | chr5.4:33793321-33793340 | MS.gene53202:intron | 30.0% |
| !! | TAAAAGAATAGTTGATGGGT+TGG | - | chr5.4:33790121-33790140 | MS.gene53202:intron | 30.0% |
| !! | TAATTGATTTTAGTCCTGCT+TGG | + | chr5.4:33789534-33789553 | None:intergenic | 30.0% |
| !! | TATAGGCTTGGTTTTTACAA+AGG | - | chr5.4:33790471-33790490 | MS.gene53202:CDS | 30.0% |
| !!! | GAATACAGCGAGTTTTAATT+TGG | - | chr5.4:33788802-33788821 | MS.gene53202:CDS | 30.0% |
| !!! | TGATACTTTTTCCATTTGTG+TGG | - | chr5.4:33793094-33793113 | MS.gene53202:intron | 30.0% |
| !!! | TGTGATTTTTGTTTCTGTTG+TGG | - | chr5.4:33788902-33788921 | MS.gene53202:intron | 30.0% |
| !!! | TTTTTTAGTGTCCCTTTCAT+CGG | + | chr5.4:33793561-33793580 | None:intergenic | 30.0% |
| AAAACCAAGCCTATAGGAAT+TGG | + | chr5.4:33790466-33790485 | None:intergenic | 35.0% | |
| AAAAGAAAGCTTCCTAACAG+GGG | + | chr5.4:33792203-33792222 | None:intergenic | 35.0% | |
| AAAATGCACAATTTCCAGGA+GGG | + | chr5.4:33791104-33791123 | None:intergenic | 35.0% | |
| AATAAGCTGTGTATCCAAAC+TGG | + | chr5.4:33789130-33789149 | None:intergenic | 35.0% | |
| AATTATGGGCCTGTTTAGAT+TGG | + | chr5.4:33789453-33789472 | None:intergenic | 35.0% | |
| ACAGAATGTTCTAGTGTGAA+AGG | + | chr5.4:33792583-33792602 | None:intergenic | 35.0% | |
| ACTTAGTAGAGTTTATTGGC+TGG | - | chr5.4:33789010-33789029 | MS.gene53202:CDS | 35.0% | |
| AGGCAATATGACTTTGCATT+AGG | + | chr5.4:33793371-33793390 | None:intergenic | 35.0% | |
| ATATATGCCCTTGCATCATT+GGG | - | chr5.4:33791380-33791399 | MS.gene53202:intron | 35.0% | |
| ATCAACCCGTACTTTCAAAA+GGG | + | chr5.4:33792118-33792137 | None:intergenic | 35.0% | |
| ATCTTTGCGAGATAAGATTC+TGG | + | chr5.4:33791362-33791381 | None:intergenic | 35.0% | |
| ATTAAACAGCATGTTTCGTC+GGG | + | chr5.4:33793679-33793698 | None:intergenic | 35.0% | |
| ATTGTGTAAGAAAAGGTGAG+TGG | + | chr5.4:33792057-33792076 | None:intergenic | 35.0% | |
| ATTTATTTGCAGATTGCTGC+TGG | - | chr5.4:33793528-33793547 | MS.gene53202:CDS | 35.0% | |
| ATTTGACATCCCGGTTAATT+AGG | + | chr5.4:33793409-33793428 | None:intergenic | 35.0% | |
| CAAAAGAAAGCTTCCTAACA+GGG | + | chr5.4:33792204-33792223 | None:intergenic | 35.0% | |
| CATACCATAAAACTAGCTAC+AGG | + | chr5.4:33789968-33789987 | None:intergenic | 35.0% | |
| CATGATTATGAGCAAGCTTA+TGG | - | chr5.4:33791431-33791450 | MS.gene53202:CDS | 35.0% | |
| CCAAAACAAAAGTTCCTAAC+AGG | + | chr5.4:33792359-33792378 | None:intergenic | 35.0% | |
| CCATTGTGCGAATGAATATT+AGG | + | chr5.4:33791986-33792005 | None:intergenic | 35.0% | |
| CCTAATATTCATTCGCACAA+TGG | - | chr5.4:33791983-33792002 | MS.gene53202:intron | 35.0% | |
| CTGCTAGAGAAAAATACATC+AGG | + | chr5.4:33791001-33791020 | None:intergenic | 35.0% | |
| GATTAAACAGCATGTTTCGT+CGG | + | chr5.4:33793680-33793699 | None:intergenic | 35.0% | |
| GGACACTAAAAAAGATCAGA+AGG | - | chr5.4:33793568-33793587 | MS.gene53202:CDS | 35.0% | |
| GTTACATGTGTAATTCAAGG+TGG | + | chr5.4:33791781-33791800 | None:intergenic | 35.0% | |
| GTTGGACCCAAATTTAAAGA+AGG | - | chr5.4:33792930-33792949 | MS.gene53202:intron | 35.0% | |
| TCAAACAAGCCAATCTAAAC+AGG | - | chr5.4:33789441-33789460 | MS.gene53202:intron | 35.0% | |
| TGGAAGAACAATCCATACAA+TGG | - | chr5.4:33790397-33790416 | MS.gene53202:CDS | 35.0% | |
| TGTAATTCAAGGTGGCAAAT+GGG | + | chr5.4:33791773-33791792 | None:intergenic | 35.0% | |
| TTATGGGAGAATTTCGTATG+GGG | + | chr5.4:33793137-33793156 | None:intergenic | 35.0% | |
| TTGTGTAAGAAAAGGTGAGT+GGG | + | chr5.4:33792056-33792075 | None:intergenic | 35.0% | |
| TTTGAGCATGCAACAGATAA+TGG | + | chr5.4:33791509-33791528 | None:intergenic | 35.0% | |
| ! | CAAAACTCCATTTAAAGTGG+AGG | + | chr5.4:33790502-33790521 | None:intergenic | 35.0% |
| ! | CATAGCAAGTTAGCCTATTA+TGG | - | chr5.4:33791152-33791171 | MS.gene53202:CDS | 35.0% |
| ! | GGCAATAATTGAAAAGTGCA+GGG | - | chr5.4:33790953-33790972 | MS.gene53202:CDS | 35.0% |
| ! | GTGGTTCTTTGTCATTTGTT+TGG | - | chr5.4:33790433-33790452 | MS.gene53202:CDS | 35.0% |
| ! | GTTCTTTGTCATTTGTTTGG+AGG | - | chr5.4:33790436-33790455 | MS.gene53202:CDS | 35.0% |
| ! | TATTCATTTCTGCCCAGTTT+TGG | + | chr5.4:33792244-33792263 | None:intergenic | 35.0% |
| ! | TCTCCCATAATTTTCCTACT+CGG | - | chr5.4:33793147-33793166 | MS.gene53202:intron | 35.0% |
| ! | TGGCAATAATTGAAAAGTGC+AGG | - | chr5.4:33790952-33790971 | MS.gene53202:CDS | 35.0% |
| !! | ATCACTTTTGCCTAACCTTT+AGG | - | chr5.4:33791583-33791602 | MS.gene53202:CDS | 35.0% |
| !! | CATGAAGTTTCAAAGGTGTT+TGG | - | chr5.4:33793320-33793339 | MS.gene53202:intron | 35.0% |
| !! | CCTGTTAGGAACTTTTGTTT+TGG | - | chr5.4:33792356-33792375 | MS.gene53202:intron | 35.0% |
| !! | GAATCATTTGACTTGGTCAT+TGG | - | chr5.4:33790789-33790808 | MS.gene53202:intron | 35.0% |
| !!! | AAAGAAGGGTTTTGAGACTT+TGG | - | chr5.4:33791526-33791545 | MS.gene53202:CDS | 35.0% |
| !!! | TTTCCCTGTAGCTAGTTTTA+TGG | - | chr5.4:33789961-33789980 | MS.gene53202:intron | 35.0% |
| AAATGCACAATTTCCAGGAG+GGG | + | chr5.4:33791103-33791122 | None:intergenic | 40.0% | |
| AACGTAAGTCCAATATCAGC+CGG | + | chr5.4:33790355-33790374 | None:intergenic | 40.0% | |
| AACTGGACCATAAGCTATCA+TGG | + | chr5.4:33789113-33789132 | None:intergenic | 40.0% | |
| AAGCAGTGGAAATGAAAGTG+GGG | + | chr5.4:33792821-33792840 | None:intergenic | 40.0% | |
| AAGCTATCATGGAGAGCTTA+TGG | + | chr5.4:33789102-33789121 | None:intergenic | 40.0% | |
| AAGCTCTCCATGATAGCTTA+TGG | - | chr5.4:33789103-33789122 | MS.gene53202:intron | 40.0% | |
| AAGTTTGGTAAGCTCGATCA+AGG | + | chr5.4:33791931-33791950 | None:intergenic | 40.0% | |
| AATTTCGTATGGGGCATAGT+GGG | + | chr5.4:33793128-33793147 | None:intergenic | 40.0% | |
| ACAAGCAGTGGAAATGAAAG+TGG | + | chr5.4:33792823-33792842 | None:intergenic | 40.0% | |
| ACAAGGTAGGCTTGATACAT+TGG | - | chr5.4:33790929-33790948 | MS.gene53202:CDS | 40.0% | |
| ACAATCCATACAATGGCAGT+TGG | - | chr5.4:33790404-33790423 | MS.gene53202:CDS | 40.0% | |
| ACCTATAATTCTGAGCTGCT+AGG | - | chr5.4:33791284-33791303 | MS.gene53202:intron | 40.0% | |
| AGACAGTTTGTAGGAGCTTA+TGG | - | chr5.4:33789047-33789066 | MS.gene53202:intron | 40.0% | |
| AGCAAGATCCATCACCTTAT+TGG | + | chr5.4:33792032-33792051 | None:intergenic | 40.0% | |
| ATCATTGGGCCATCTACAAA+AGG | - | chr5.4:33791394-33791413 | MS.gene53202:CDS | 40.0% | |
| ATCTGTTGCATGCTCAAAGA+AGG | - | chr5.4:33791511-33791530 | MS.gene53202:CDS | 40.0% | |
| CAAAAGGGGCAATGGAATTA+TGG | + | chr5.4:33792103-33792122 | None:intergenic | 40.0% | |
| CAAGCAGTGGAAATGAAAGT+GGG | + | chr5.4:33792822-33792841 | None:intergenic | 40.0% | |
| CAGTTAGAACCTTGTAGGTT+GGG | + | chr5.4:33793060-33793079 | None:intergenic | 40.0% | |
| CATAAACTCCAGGCCATAAT+AGG | + | chr5.4:33791168-33791187 | None:intergenic | 40.0% | |
| CCAAAAGAAAGCTTCCTAAC+AGG | + | chr5.4:33792205-33792224 | None:intergenic | 40.0% | |
| CTATTATGGCCTGGAGTTTA+TGG | - | chr5.4:33791166-33791185 | MS.gene53202:CDS | 40.0% | |
| CTGGATTTGAACCGATGAAA+GGG | - | chr5.4:33793547-33793566 | MS.gene53202:CDS | 40.0% | |
| GAAAATGCACAATTTCCAGG+AGG | + | chr5.4:33791105-33791124 | None:intergenic | 40.0% | |
| GATATATGCCCTTGCATCAT+TGG | - | chr5.4:33791379-33791398 | MS.gene53202:intron | 40.0% | |
| GATCAACCCGTACTTTCAAA+AGG | + | chr5.4:33792119-33792138 | None:intergenic | 40.0% | |
| GATTCCTCATTGTTGTATGC+AGG | - | chr5.4:33791052-33791071 | MS.gene53202:CDS | 40.0% | |
| GCAGACACATGAAGTTTCAA+AGG | - | chr5.4:33793313-33793332 | MS.gene53202:intron | 40.0% | |
| GCGAGATAAGATTCTGGATT+TGG | + | chr5.4:33791356-33791375 | None:intergenic | 40.0% | |
| GCGCTAAACTGTATCATTGT+AGG | - | chr5.4:33791887-33791906 | MS.gene53202:intron | 40.0% | |
| GGATTGAAAGTGAAGACACA+AGG | - | chr5.4:33792514-33792533 | MS.gene53202:intron | 40.0% | |
| GGGATAACCTCCACTTTAAA+TGG | - | chr5.4:33790492-33790511 | MS.gene53202:CDS | 40.0% | |
| GTGTAATTCAAGGTGGCAAA+TGG | + | chr5.4:33791774-33791793 | None:intergenic | 40.0% | |
| GTTATCAGGATGCTACAATC+TGG | - | chr5.4:33790744-33790763 | MS.gene53202:intron | 40.0% | |
| GTTTAATTCCCGGCTGATAT+TGG | - | chr5.4:33790343-33790362 | MS.gene53202:CDS | 40.0% | |
| TCAACCCGTACTTTCAAAAG+GGG | + | chr5.4:33792117-33792136 | None:intergenic | 40.0% | |
| TCAGTTAGAACCTTGTAGGT+TGG | + | chr5.4:33793061-33793080 | None:intergenic | 40.0% | |
| TCATCTACAGAAAGCAACAC+AGG | + | chr5.4:33791227-33791246 | None:intergenic | 40.0% | |
| TCCTAGCAGCTCAGAATTAT+AGG | + | chr5.4:33791288-33791307 | None:intergenic | 40.0% | |
| TCGATCTTACAATTACCGAC+TGG | - | chr5.4:33793644-33793663 | MS.gene53202:CDS | 40.0% | |
| TCTGTTGCATGCTCAAAGAA+GGG | - | chr5.4:33791512-33791531 | MS.gene53202:CDS | 40.0% | |
| TGATAGCTTATGGTCCAGTT+TGG | - | chr5.4:33789113-33789132 | MS.gene53202:intron | 40.0% | |
| TGATATGCATTTGTCCAAGC+AGG | - | chr5.4:33789517-33789536 | MS.gene53202:intron | 40.0% | |
| TGTAGGATCTGCGAACATAT+GGG | - | chr5.4:33791904-33791923 | MS.gene53202:intron | 40.0% | |
| TGTGCTAATCTCATCGCATT+TGG | - | chr5.4:33790377-33790396 | MS.gene53202:CDS | 40.0% | |
| TGTGTAAGAAAAGGTGAGTG+GGG | + | chr5.4:33792055-33792074 | None:intergenic | 40.0% | |
| TTCATTTCCACTGCTTGTGT+GGG | - | chr5.4:33792825-33792844 | MS.gene53202:intron | 40.0% | |
| TTGTAGGATCTGCGAACATA+TGG | - | chr5.4:33791903-33791922 | MS.gene53202:intron | 40.0% | |
| TTTACAATGCCTTGCACTCA+AGG | - | chr5.4:33792537-33792556 | MS.gene53202:intron | 40.0% | |
| TTTCATTTCCACTGCTTGTG+TGG | - | chr5.4:33792824-33792843 | MS.gene53202:intron | 40.0% | |
| TTTGTCCAACTGCCATTGTA+TGG | + | chr5.4:33790412-33790431 | None:intergenic | 40.0% | |
| ! | AAGAGCCTGACTTCTAAAAG+TGG | + | chr5.4:33790285-33790304 | None:intergenic | 40.0% |
| ! | AGAGCCTGACTTCTAAAAGT+GGG | + | chr5.4:33790284-33790303 | None:intergenic | 40.0% |
| ! | AGAGTATCATCTCTTCTCTG+AGG | + | chr5.4:33793031-33793050 | None:intergenic | 40.0% |
| ! | ATGGGCTGATGTATGCATTT+GGG | - | chr5.4:33792002-33792021 | MS.gene53202:intron | 40.0% |
| ! | CCTGTTAGGAAGCTTTCTTT+TGG | - | chr5.4:33792202-33792221 | MS.gene53202:intron | 40.0% |
| ! | CGATCTTACAATTACCGACT+GGG | - | chr5.4:33793645-33793664 | MS.gene53202:CDS | 40.0% |
| ! | GCTTCTTTTTACGCAACGAA+CGG | + | chr5.4:33791331-33791350 | None:intergenic | 40.0% |
| ! | TCTATACCAGCCTCTAGAAA+AGG | + | chr5.4:33790255-33790274 | None:intergenic | 40.0% |
| ! | TGATAGAGGCAGACAGATTT+TGG | - | chr5.4:33792908-33792927 | MS.gene53202:intron | 40.0% |
| ! | TGCCAAATGCCTTTTGTAGA+TGG | + | chr5.4:33791406-33791425 | None:intergenic | 40.0% |
| !! | AAAGCCCACTTTTAGAAGTC+AGG | - | chr5.4:33790277-33790296 | MS.gene53202:intron | 40.0% |
| !! | AATGGGCTGATGTATGCATT+TGG | - | chr5.4:33792001-33792020 | MS.gene53202:intron | 40.0% |
| !! | ATGGCTCGATGGATTGTAAA+GGG | - | chr5.4:33791185-33791204 | MS.gene53202:CDS | 40.0% |
| !! | ATTGCCCCTTTTGAAAGTAC+GGG | - | chr5.4:33792110-33792129 | MS.gene53202:intron | 40.0% |
| !! | CATTGCCCCTTTTGAAAGTA+CGG | - | chr5.4:33792109-33792128 | MS.gene53202:intron | 40.0% |
| !! | GCTTGATTTGTTAGCTCAGA+TGG | - | chr5.4:33788760-33788779 | MS.gene53202:CDS | 40.0% |
| !! | GTGTTGCTTTCTGTAGATGA+AGG | - | chr5.4:33791227-33791246 | MS.gene53202:CDS | 40.0% |
| !! | GTTTTGCTTGCTAAACCTAG+CGG | - | chr5.4:33790516-33790535 | MS.gene53202:CDS | 40.0% |
| !! | TATGGCTCGATGGATTGTAA+AGG | - | chr5.4:33791184-33791203 | MS.gene53202:CDS | 40.0% |
| !! | TATGGGAGTGCTTGATGATA+TGG | - | chr5.4:33793433-33793452 | MS.gene53202:intron | 40.0% |
| !! | TCAAGCTGCGTTTTGTTATC+AGG | - | chr5.4:33790730-33790749 | MS.gene53202:intron | 40.0% |
| !! | TTTTCTAGAGGCTGGTATAG+AGG | - | chr5.4:33790254-33790273 | MS.gene53202:intron | 40.0% |
| !!! | GTGCTTTTGAGACAGTTTGT+AGG | - | chr5.4:33789038-33789057 | MS.gene53202:intron | 40.0% |
| AAAGAGTCAGAAAGCAGGCT+TGG | + | chr5.4:33793193-33793212 | None:intergenic | 45.0% | |
| AAGAGTCAGAAAGCAGGCTT+GGG | + | chr5.4:33793192-33793211 | None:intergenic | 45.0% | |
| ACATGGTAACACGTTGTCAG+TGG | - | chr5.4:33790872-33790891 | MS.gene53202:CDS | 45.0% | |
| ACGTAAGTCCAATATCAGCC+GGG | + | chr5.4:33790354-33790373 | None:intergenic | 45.0% | |
| AGCTGAAGTTGCAATTCGAG+CGG | - | chr5.4:33791127-33791146 | MS.gene53202:CDS | 45.0% | |
| AGGTAGGCTTGATACATTGG+TGG | - | chr5.4:33790932-33790951 | MS.gene53202:CDS | 45.0% | |
| CAATGGCAGTTGGACAAATG+TGG | - | chr5.4:33790414-33790433 | MS.gene53202:CDS | 45.0% | |
| CCATAGCAGATTTGACATCC+CGG | + | chr5.4:33793418-33793437 | None:intergenic | 45.0% | |
| CGGGATGTCAAATCTGCTAT+GGG | - | chr5.4:33793416-33793435 | MS.gene53202:intron | 45.0% | |
| CGTACTTTCAAAAGGGGCAA+TGG | + | chr5.4:33792111-33792130 | None:intergenic | 45.0% | |
| CTGCTGAGAAGCTTCTTGAA+CGG | - | chr5.4:33788861-33788880 | MS.gene53202:intron | 45.0% | |
| CTTGCTAAACCTAGCGGAAA+GGG | - | chr5.4:33790522-33790541 | MS.gene53202:intron | 45.0% | |
| GAATTTCGTATGGGGCATAG+TGG | + | chr5.4:33793129-33793148 | None:intergenic | 45.0% | |
| GACATCCCGGTTAATTAGGT+GGG | + | chr5.4:33793405-33793424 | None:intergenic | 45.0% | |
| GAGGGGCTGTTAGGATATAT+TGG | + | chr5.4:33792791-33792810 | None:intergenic | 45.0% | |
| GCTGATGTATGCATTTGGGA+AGG | - | chr5.4:33792006-33792025 | MS.gene53202:intron | 45.0% | |
| GCTGGATTTGAACCGATGAA+AGG | - | chr5.4:33793546-33793565 | MS.gene53202:CDS | 45.0% | |
| GGAGTTGTGTCAAACAAGGT+AGG | - | chr5.4:33790916-33790935 | MS.gene53202:CDS | 45.0% | |
| GGGCCGAGTAGGAAAATTAT+GGG | + | chr5.4:33793153-33793172 | None:intergenic | 45.0% | |
| GGTTCTTAAGGCTATGCATC+AGG | - | chr5.4:33788823-33788842 | MS.gene53202:intron | 45.0% | |
| GTGAGGAGTTGTGTCAAACA+AGG | - | chr5.4:33790912-33790931 | MS.gene53202:CDS | 45.0% | |
| GTTGCCTGCATACAACAATG+AGG | + | chr5.4:33791059-33791078 | None:intergenic | 45.0% | |
| GTTTGGGCACATAGTAGGTT+CGG | - | chr5.4:33793337-33793356 | MS.gene53202:intron | 45.0% | |
| TAGATGGCCCAATGATGCAA+GGG | + | chr5.4:33791390-33791409 | None:intergenic | 45.0% | |
| TCATTTCCACTGCTTGTGTG+GGG | - | chr5.4:33792826-33792845 | MS.gene53202:intron | 45.0% | |
| TCGATGCCCACCTAATTAAC+CGG | - | chr5.4:33793396-33793415 | MS.gene53202:intron | 45.0% | |
| TCTACAGAAAGCAACACAGG+AGG | + | chr5.4:33791224-33791243 | None:intergenic | 45.0% | |
| TGACATCCCGGTTAATTAGG+TGG | + | chr5.4:33793406-33793425 | None:intergenic | 45.0% | |
| TGAGCCAATTCCTATAGGCT+TGG | - | chr5.4:33790459-33790478 | MS.gene53202:CDS | 45.0% | |
| TGCATTTGGGAAGGCCAATA+AGG | - | chr5.4:33792015-33792034 | MS.gene53202:intron | 45.0% | |
| TTGGGCCTAAGCCCAATAAA+GGG | + | chr5.4:33793174-33793193 | None:intergenic | 45.0% | |
| TTTGGGCACATAGTAGGTTC+GGG | - | chr5.4:33793338-33793357 | MS.gene53202:intron | 45.0% | |
| ! | AAGGTGTTTGGGCACATAGT+AGG | - | chr5.4:33793332-33793351 | MS.gene53202:intron | 45.0% |
| ! | ATTGAAAAGTGCAGGGTGAG+TGG | - | chr5.4:33790960-33790979 | MS.gene53202:CDS | 45.0% |
| ! | CAAGTTAGCCTATTATGGCC+TGG | - | chr5.4:33791157-33791176 | MS.gene53202:CDS | 45.0% |
| ! | CCTCTAGAAAAGGCAAGACA+CGG | + | chr5.4:33790245-33790264 | None:intergenic | 45.0% |
| ! | TCTCTTTTGCCCAACCTACA+AGG | - | chr5.4:33793048-33793067 | MS.gene53202:intron | 45.0% |
| ! | TGTTGTTGATTGCCCCTGTT+AGG | - | chr5.4:33792188-33792207 | MS.gene53202:intron | 45.0% |
| !! | AGAGGCAGACAGATTTTGGT+TGG | - | chr5.4:33792912-33792931 | MS.gene53202:intron | 45.0% |
| !! | GGCCATCTACAAAAGGCATT+TGG | - | chr5.4:33791401-33791420 | MS.gene53202:CDS | 45.0% |
| !! | TGAAGGATGGGTTAGGAGTT+TGG | - | chr5.4:33788646-33788665 | MS.gene53202:CDS | 45.0% |
| AACCTAGCGGAAAGGGAGTA+TGG | - | chr5.4:33790529-33790548 | MS.gene53202:intron | 50.0% | |
| ACTTGTATGGACGCTCAGCA+CGG | + | chr5.4:33791859-33791878 | None:intergenic | 50.0% | |
| AGCGCAGCAACAGACTTGTA+TGG | + | chr5.4:33791872-33791891 | None:intergenic | 50.0% | |
| ATGAAAGTGGGGTGGATGTG+AGG | + | chr5.4:33792810-33792829 | None:intergenic | 50.0% | |
| CACTGAAAGCGATGAACGAC+TGG | - | chr5.4:33793611-33793630 | MS.gene53202:CDS | 50.0% | |
| CAGTGGAAATGAAAGTGGGG+TGG | + | chr5.4:33792818-33792837 | None:intergenic | 50.0% | |
| CATTTCCACTGCTTGTGTGG+GGG | - | chr5.4:33792827-33792846 | MS.gene53202:intron | 50.0% | |
| CCAGTAGATAGACTCGAGTG+AGG | - | chr5.4:33789366-33789385 | MS.gene53202:intron | 50.0% | |
| CCGGGATGTCAAATCTGCTA+TGG | - | chr5.4:33793415-33793434 | MS.gene53202:intron | 50.0% | |
| CCTCACTCGAGTCTATCTAC+TGG | + | chr5.4:33789369-33789388 | None:intergenic | 50.0% | |
| CGATGCCCACCTAATTAACC+GGG | - | chr5.4:33793397-33793416 | MS.gene53202:intron | 50.0% | |
| CTTAAGGCTATGCATCAGGC+TGG | - | chr5.4:33788827-33788846 | MS.gene53202:intron | 50.0% | |
| CTTGGGCCTAAGCCCAATAA+AGG | + | chr5.4:33793175-33793194 | None:intergenic | 50.0% | |
| GGAGGTGAGCCAATTCCTAT+AGG | - | chr5.4:33790454-33790473 | MS.gene53202:CDS | 50.0% | |
| GGGGCCGAGTAGGAAAATTA+TGG | + | chr5.4:33793154-33793173 | None:intergenic | 50.0% | |
| GGGTTACGCAACCACACAAA+TGG | + | chr5.4:33793108-33793127 | None:intergenic | 50.0% | |
| GTAGATGGCCCAATGATGCA+AGG | + | chr5.4:33791391-33791410 | None:intergenic | 50.0% | |
| TCCATCGAGCCATAAACTCC+AGG | + | chr5.4:33791178-33791197 | None:intergenic | 50.0% | |
| TCCTACTCGGCCCCTTTATT+GGG | - | chr5.4:33793160-33793179 | MS.gene53202:intron | 50.0% | |
| TGAAAGTGGGGTGGATGTGA+GGG | + | chr5.4:33792809-33792828 | None:intergenic | 50.0% | |
| TGCACTCAAGGCTACCCTAA+AGG | - | chr5.4:33792549-33792568 | MS.gene53202:intron | 50.0% | |
| TGCAGTCATCAGAGCTGACA+CGG | + | chr5.4:33791258-33791277 | None:intergenic | 50.0% | |
| TGGGAAGGCCAATAAGGTGA+TGG | - | chr5.4:33792021-33792040 | MS.gene53202:intron | 50.0% | |
| TGGGCCTAAGCCCAATAAAG+GGG | + | chr5.4:33793173-33793192 | None:intergenic | 50.0% | |
| TTCCTACTCGGCCCCTTTAT+TGG | - | chr5.4:33793159-33793178 | MS.gene53202:intron | 50.0% | |
| ! | ACCTAGCGGAAAGGGAGTAT+GGG | - | chr5.4:33790530-33790549 | MS.gene53202:intron | 50.0% |
| ! | AGCTGTTGATTGCCCCTGTT+AGG | - | chr5.4:33792342-33792361 | MS.gene53202:intron | 50.0% |
| ! | CCGTGTCTTGCCTTTTCTAG+AGG | - | chr5.4:33790242-33790261 | MS.gene53202:intron | 50.0% |
| ! | GAAAGGAGCGTGCTCCTTTA+GGG | + | chr5.4:33792566-33792585 | None:intergenic | 50.0% |
| ! | GCTTGCTAAACCTAGCGGAA+AGG | - | chr5.4:33790521-33790540 | MS.gene53202:intron | 50.0% |
| ! | TGAAAGGAGCGTGCTCCTTT+AGG | + | chr5.4:33792567-33792586 | None:intergenic | 50.0% |
| ! | TTAGGGTAGCCTTGAGTGCA+AGG | + | chr5.4:33792549-33792568 | None:intergenic | 50.0% |
| !! | GTCTTGCCTTTTCTAGAGGC+TGG | - | chr5.4:33790246-33790265 | MS.gene53202:intron | 50.0% |
| !! | TTAGGTGGGCATCGATAAGC+AGG | + | chr5.4:33793391-33793410 | None:intergenic | 50.0% |
| ACAAAGCTCTTTGCCCCTCC+TGG | - | chr5.4:33791087-33791106 | MS.gene53202:CDS | 55.0% | |
| GAAAGTGGGGTGGATGTGAG+GGG | + | chr5.4:33792808-33792827 | None:intergenic | 55.0% | |
| GCCTGGAGTTTATGGCTCGA+TGG | - | chr5.4:33791174-33791193 | MS.gene53202:CDS | 55.0% | |
| TCCCATACTCCCTTTCCGCT+AGG | + | chr5.4:33790534-33790553 | None:intergenic | 55.0% | |
| TCGGCCCCTTTATTGGGCTT+AGG | - | chr5.4:33793166-33793185 | MS.gene53202:intron | 55.0% | |
| TGAGCTGCTAGGAGCAGCAT+GGG | - | chr5.4:33791295-33791314 | MS.gene53202:intron | 55.0% | |
| ! | GTGTCAGCTCTGATGACTGC+AGG | - | chr5.4:33791257-33791276 | MS.gene53202:CDS | 55.0% |
| !! | AGGAGCAGCATGGGCTGTTT+TGG | - | chr5.4:33791304-33791323 | MS.gene53202:intron | 55.0% |
| CAAGACCCCCACACAAGCAG+TGG | + | chr5.4:33792835-33792854 | None:intergenic | 60.0% | |
| CACTGCTTGTGTGGGGGTCT+TGG | - | chr5.4:33792833-33792852 | MS.gene53202:intron | 60.0% | |
| CTGAGCTGCTAGGAGCAGCA+TGG | - | chr5.4:33791294-33791313 | MS.gene53202:intron | 60.0% | |
| GCCCAATAAAGGGGCCGAGT+AGG | + | chr5.4:33793164-33793183 | None:intergenic | 60.0% | |
| GGTGGATGTGAGGGGCTGTT+AGG | + | chr5.4:33792800-33792819 | None:intergenic | 60.0% | |
| GTCGGGCTTCAGAACCCAGT+CGG | + | chr5.4:33793662-33793681 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 33788641 | 33793725 | 33788641 | ID=MS.gene53202 |
| chr5.4 | mRNA | 33788641 | 33793725 | 33788641 | ID=MS.gene53202.t1;Parent=MS.gene53202 |
| chr5.4 | exon | 33793484 | 33793725 | 33793484 | ID=MS.gene53202.t1.exon1;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33793484 | 33793725 | 33793484 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| chr5.4 | exon | 33791392 | 33791614 | 33791392 | ID=MS.gene53202.t1.exon2;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33791392 | 33791614 | 33791392 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| chr5.4 | exon | 33790813 | 33791292 | 33790813 | ID=MS.gene53202.t1.exon3;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33790813 | 33791292 | 33790813 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| chr5.4 | exon | 33790330 | 33790536 | 33790330 | ID=MS.gene53202.t1.exon4;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33790330 | 33790536 | 33790330 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| chr5.4 | exon | 33788912 | 33789049 | 33788912 | ID=MS.gene53202.t1.exon5;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33788912 | 33789049 | 33788912 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| chr5.4 | exon | 33788641 | 33788826 | 33788641 | ID=MS.gene53202.t1.exon6;Parent=MS.gene53202.t1 |
| chr5.4 | CDS | 33788641 | 33788826 | 33788641 | ID=cds.MS.gene53202.t1;Parent=MS.gene53202.t1 |
| Gene Sequence |
| Protein sequence |
