Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53323.t1 | XP_013444431.1 | 94.6 | 1036 | 25 | 3 | 1 | 1035 | 1 | 1006 | 0.00E+00 | 1510.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53323.t1 | Q8VZS6 | 46.3 | 82 | 43 | 1 | 11 | 91 | 6 | 87 | 3.5e-08 | 62.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53323.t1 | A0A072TMN9 | 94.6 | 1036 | 25 | 3 | 1 | 1035 | 1 | 1006 | 0.0e+00 | 1510.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058661 | MS.gene53323 | 0.802923 | 4.46E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53323.t1 | MTR_8g019650 | 94.884 | 1036 | 22 | 3 | 1 | 1035 | 1 | 1006 | 0.0 | 1915 |
MS.gene53323.t1 | MTR_5g069290 | 26.753 | 699 | 373 | 33 | 425 | 1035 | 221 | 868 | 5.16e-28 | 122 |
MS.gene53323.t1 | MTR_5g069290 | 66.216 | 74 | 18 | 1 | 23 | 96 | 14 | 80 | 7.38e-21 | 99.4 |
MS.gene53323.t1 | MTR_8g088190 | 52.000 | 75 | 34 | 1 | 9 | 81 | 6 | 80 | 1.49e-16 | 85.5 |
MS.gene53323.t1 | MTR_5g096290 | 64.912 | 57 | 19 | 1 | 23 | 78 | 20 | 76 | 1.98e-15 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53323.t1 | AT3G13990 | 46.949 | 803 | 348 | 27 | 267 | 1035 | 89 | 847 | 1.43e-179 | 545 |
MS.gene53323.t1 | AT3G13990 | 60.241 | 83 | 29 | 2 | 1 | 83 | 1 | 79 | 1.13e-20 | 99.0 |
MS.gene53323.t1 | AT3G13990 | 46.891 | 804 | 348 | 28 | 267 | 1035 | 89 | 848 | 1.20e-177 | 540 |
MS.gene53323.t1 | AT3G13990 | 60.241 | 83 | 29 | 2 | 1 | 83 | 1 | 79 | 1.15e-20 | 98.6 |
MS.gene53323.t1 | AT3G07660 | 57.746 | 71 | 28 | 2 | 13 | 81 | 3 | 73 | 1.27e-16 | 85.5 |
MS.gene53323.t1 | AT4G18150 | 37.594 | 133 | 69 | 5 | 9 | 133 | 2 | 128 | 5.79e-14 | 77.0 |
MS.gene53323.t1 | AT3G13222 | 49.351 | 77 | 34 | 3 | 5 | 79 | 2 | 75 | 1.66e-12 | 72.0 |
MS.gene53323.t1 | AT1G29350 | 55.932 | 59 | 25 | 1 | 9 | 67 | 7 | 64 | 1.14e-11 | 69.7 |
MS.gene53323.t1 | AT1G29370 | 55.932 | 59 | 25 | 1 | 9 | 67 | 7 | 64 | 1.16e-11 | 69.7 |
Find 329 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGCCAACAATTTCCTTAA+TGG | 0.126935 | 8.4:+73606248 | None:intergenic |
ATTGCTGAACTCCGTATTTA+AGG | 0.140796 | 8.4:+73599824 | None:intergenic |
CCCTTCTCAGGATGCCTTCT+TGG | 0.160156 | 8.4:+73604300 | None:intergenic |
GAAGCTACTGCAAATTTAAA+TGG | 0.184994 | 8.4:-73601136 | MS.gene53323:CDS |
CTTGACAATTATAGCAATAT+TGG | 0.188698 | 8.4:-73600814 | MS.gene53323:CDS |
TTGTCCACCGATGATGTTTC+TGG | 0.213116 | 8.4:-73600958 | MS.gene53323:CDS |
CTTGAGGATTCTTTGTTATC+AGG | 0.251245 | 8.4:+73600847 | None:intergenic |
CCAACATTGTTTCCCATTGC+TGG | 0.270191 | 8.4:+73598741 | None:intergenic |
AGCAACGGTCCTGGAGTAAT+TGG | 0.270250 | 8.4:-73601391 | MS.gene53323:CDS |
AAGCACCATACCTGAGGATT+TGG | 0.270531 | 8.4:+73599658 | None:intergenic |
CAGAATCCAAGAGATCTTTC+TGG | 0.271797 | 8.4:-73598948 | MS.gene53323:CDS |
GTCCCTGCTGGTAGTCCTAC+TGG | 0.274819 | 8.4:-73599793 | MS.gene53323:CDS |
GACCGTTGCTGTTTGTCTTC+AGG | 0.284942 | 8.4:+73601404 | None:intergenic |
CCCTTCTCAGGATGCCTTCT+CGG | 0.287958 | 8.4:+73604267 | None:intergenic |
GCCATGGGTGGTACATAAAC+TGG | 0.289207 | 8.4:+73599946 | None:intergenic |
TGAACATAATGCTGGGTATA+GGG | 0.298772 | 8.4:-73604508 | MS.gene53323:CDS |
TGCAGTTTCCCAGCATAATA+AGG | 0.299091 | 8.4:-73601446 | MS.gene53323:intron |
ATGCCTAGTCCTCATCATTT+AGG | 0.304639 | 8.4:-73598765 | MS.gene53323:CDS |
GGCTAAGAGGTTCAGTTGTT+TGG | 0.318401 | 8.4:+73601951 | None:intergenic |
AGAAATCAGCAGACTCTAAA+TGG | 0.318422 | 8.4:-73602379 | MS.gene53323:CDS |
CGTCCAGTTTCATCCATATT+AGG | 0.330350 | 8.4:+73600554 | None:intergenic |
TAAAACTATTCAATCCATTA+AGG | 0.332235 | 8.4:-73606262 | MS.gene53323:CDS |
AATGCTAATAATTCTATTGT+TGG | 0.333121 | 8.4:-73602019 | MS.gene53323:CDS |
AGCCGACAGCGATCAGTTTC+TGG | 0.333687 | 8.4:+73601229 | None:intergenic |
TCCATATTAGGTCTAAAATA+AGG | 0.338640 | 8.4:+73600566 | None:intergenic |
GAGCCATTAGGCGTGAAGTT+GGG | 0.340267 | 8.4:-73602108 | MS.gene53323:CDS |
TGGATGTTGTCGGGCTTAAT+TGG | 0.342491 | 8.4:+73602241 | None:intergenic |
GGAGTGGCTGGAGCTGCTCC+TGG | 0.342607 | 8.4:-73598720 | MS.gene53323:CDS |
CCCAGAAGGCATCCTGAAAA+TGG | 0.346566 | 8.4:-73604234 | MS.gene53323:CDS |
TCGACCAATCGAAGGTCATC+TGG | 0.346688 | 8.4:-73602406 | MS.gene53323:CDS |
TTTGTCTTCAGGCTTGATTT+AGG | 0.350030 | 8.4:+73601415 | None:intergenic |
AATTTCTGAGTAGTTTCATT+AGG | 0.352262 | 8.4:+73606177 | None:intergenic |
CTCAATTGGGTCACCTCAAT+TGG | 0.353029 | 8.4:-73598671 | MS.gene53323:CDS |
AATTCTATTGTTGGAAAAGA+TGG | 0.353289 | 8.4:-73602010 | MS.gene53323:CDS |
TAATGCTGGGAACAGGGGTT+CGG | 0.353992 | 8.4:-73604589 | MS.gene53323:CDS |
TAATGCTGGGAACAGGGGTT+CGG | 0.353992 | 8.4:-73604676 | MS.gene53323:CDS |
AGTGTAGGGAACAGGGGTTC+GGG | 0.361138 | 8.4:-73604762 | MS.gene53323:CDS |
AATGCTGGGAACAGGGGTTC+GGG | 0.363025 | 8.4:-73604588 | MS.gene53323:CDS |
AATGCTGGGAACAGGGGTTC+GGG | 0.363025 | 8.4:-73604675 | MS.gene53323:CDS |
TGCATATCAGCAACCTCAAT+TGG | 0.364547 | 8.4:-73598685 | MS.gene53323:CDS |
CTGAACATAATGCTGGGTAT+AGG | 0.372336 | 8.4:-73604509 | MS.gene53323:CDS |
AACCCCAACTTCACGCCTAA+TGG | 0.374409 | 8.4:+73602105 | None:intergenic |
TCTTCTCACATGCAGTTTCC+CGG | 0.377153 | 8.4:-73598819 | MS.gene53323:CDS |
GAGTGTAGGGAACAGGGGTT+CGG | 0.378593 | 8.4:-73604763 | MS.gene53323:CDS |
TCAGGAGAGGGCACATGAAC+TGG | 0.381596 | 8.4:+73602154 | None:intergenic |
CTGAACATAATGTTGGAAAC+AGG | 0.383407 | 8.4:-73604422 | MS.gene53323:CDS |
GGGATTCGGGTGAACCAAAA+AGG | 0.385319 | 8.4:-73604401 | MS.gene53323:CDS |
AGGCTGAGACATCAGAAATA+TGG | 0.387068 | 8.4:-73598974 | MS.gene53323:CDS |
TGCATTCCAGAAAGATCTCT+TGG | 0.389161 | 8.4:+73598942 | None:intergenic |
TTTCAAAACTTTGCAAATCC+AGG | 0.389552 | 8.4:-73599769 | MS.gene53323:CDS |
TGAACAATCAGTATAATAGT+AGG | 0.390550 | 8.4:-73601865 | MS.gene53323:CDS |
GGCGTGGTTGGTGGTGCGTC+AGG | 0.390616 | 8.4:-73599727 | MS.gene53323:CDS |
AAGCTACTGCAAATTTAAAT+GGG | 0.392110 | 8.4:-73601135 | MS.gene53323:CDS |
AGACCTAATATGGATGAAAC+TGG | 0.399622 | 8.4:-73600557 | MS.gene53323:CDS |
TGAATCAGAGTGTAGGGAAC+AGG | 0.400865 | 8.4:-73604770 | MS.gene53323:CDS |
CAATCCATTAAGGAAATTGT+TGG | 0.405187 | 8.4:-73606252 | MS.gene53323:CDS |
GTTTCCACTCCTTATTATGC+TGG | 0.408667 | 8.4:+73601437 | None:intergenic |
AATGTTGGAAACAGGGATTC+GGG | 0.409496 | 8.4:-73604414 | MS.gene53323:CDS |
TAATGTTGGAAACAGGGATT+CGG | 0.411747 | 8.4:-73604415 | MS.gene53323:CDS |
ACCTGCAAACACTTCTGAAA+AGG | 0.413585 | 8.4:-73603040 | MS.gene53323:CDS |
CTGAACATAATGCTGGGAAC+AGG | 0.413632 | 8.4:-73604596 | MS.gene53323:CDS |
CTGAACATAATGCTGGGAAC+AGG | 0.413632 | 8.4:-73604683 | MS.gene53323:CDS |
CCTGCAAACACTTCTGAAAA+GGG | 0.415513 | 8.4:-73603039 | MS.gene53323:CDS |
AGAAATTTGTTGTCCAATTG+AGG | 0.416328 | 8.4:+73598658 | None:intergenic |
AGCACCATACCTGAGGATTT+GGG | 0.420019 | 8.4:+73599659 | None:intergenic |
CTCTCCTGATTCCAGATCAT+CGG | 0.421910 | 8.4:-73602140 | MS.gene53323:CDS |
AGGCGTGAAGTTGGGGTTGT+TGG | 0.422623 | 8.4:-73602100 | MS.gene53323:CDS |
TGCAAATTTAAATGGGGAAT+CGG | 0.426714 | 8.4:-73601128 | MS.gene53323:CDS |
CTAGGAGGAAACAACTGTTT+CGG | 0.426728 | 8.4:+73602049 | None:intergenic |
AGCACCAGATGCTGGAGATT+CGG | 0.427464 | 8.4:+73600888 | None:intergenic |
AGGCATCCTGAGAAGGGTTC+GGG | 0.427547 | 8.4:-73604261 | MS.gene53323:CDS |
AGGCATCCTGAGAAGGGTTC+GGG | 0.427547 | 8.4:-73604294 | MS.gene53323:CDS |
GACGCACCACCAACCACGCC+TGG | 0.427947 | 8.4:+73599730 | None:intergenic |
CTTCGAACTCTATGTTCAGC+AGG | 0.430257 | 8.4:+73604186 | None:intergenic |
ACTATTATACTGATTGTTCA+AGG | 0.432290 | 8.4:+73601868 | None:intergenic |
ATCTGCAGATTCATTTCAAT+CGG | 0.434716 | 8.4:-73601984 | MS.gene53323:CDS |
CGGGTGTTGTTGGAGCCATT+AGG | 0.434923 | 8.4:-73602120 | MS.gene53323:CDS |
GATCGCTGTCGGCTGACCTT+TGG | 0.435157 | 8.4:-73601220 | MS.gene53323:CDS |
AAGGCATCCTGAGAAGGGTT+CGG | 0.437885 | 8.4:-73604262 | MS.gene53323:CDS |
AAGGCATCCTGAGAAGGGTT+CGG | 0.437885 | 8.4:-73604295 | MS.gene53323:CDS |
CTCTCCTTCTCTTCACCTCA+TGG | 0.439322 | 8.4:+73604928 | None:intergenic |
CATTATGTTCAGAAGGGTTG+TGG | 0.441387 | 8.4:+73604346 | None:intergenic |
TCCAACAACACCCGATGATC+TGG | 0.442175 | 8.4:+73602129 | None:intergenic |
CCGTTTGTTGGATGAGGATA+GGG | 0.444398 | 8.4:+73599898 | None:intergenic |
CCACCTTCCGTTCTTGAAGC+AGG | 0.444913 | 8.4:+73606327 | None:intergenic |
GGAAACAATGTTGGAGTGGC+TGG | 0.444914 | 8.4:-73598732 | MS.gene53323:CDS |
TGAGAATCTTGTTGTGATGC+TGG | 0.445163 | 8.4:+73600760 | None:intergenic |
CGGCTGACCTTTGGTACCAT+TGG | 0.446669 | 8.4:-73601211 | MS.gene53323:CDS |
CCGACAGCTGGTTGGCTAAG+AGG | 0.448028 | 8.4:+73601938 | None:intergenic |
GCAGGTTCTTTCACCACCTC+AGG | 0.448091 | 8.4:-73600528 | MS.gene53323:CDS |
TTTCTGGCATGTCTGTTAGC+AGG | 0.448787 | 8.4:-73601895 | MS.gene53323:CDS |
CATTATGTTCAGAAGGTTTG+TGG | 0.450963 | 8.4:+73604520 | None:intergenic |
TGTACCACCCATGGCTGTGC+CGG | 0.453852 | 8.4:-73599938 | MS.gene53323:CDS |
CATTATGTTCAGAAGGGTTG+TGG | 0.454867 | 8.4:+73604607 | None:intergenic |
CATTATGTTCAGAAGGGTTG+TGG | 0.454867 | 8.4:+73604694 | None:intergenic |
AACCCTTCTGAACATAATGC+TGG | 0.457524 | 8.4:-73604603 | MS.gene53323:CDS |
AACCCTTCTGAACATAATGC+TGG | 0.457524 | 8.4:-73604690 | MS.gene53323:CDS |
TTGGGTGTTCCAATTACTCC+AGG | 0.458488 | 8.4:+73601382 | None:intergenic |
CTTCTCTTCACCTCATGGAA+TGG | 0.458790 | 8.4:+73604933 | None:intergenic |
TAAGGCCGTTGGCATTAAGA+TGG | 0.458914 | 8.4:+73599842 | None:intergenic |
AAGTAACTGTTGCCGTTTGT+TGG | 0.459464 | 8.4:+73599886 | None:intergenic |
GGTTCACCCGAACCCTTCTC+AGG | 0.461455 | 8.4:+73604255 | None:intergenic |
CCATTGTCAGAATGCCTCCT+TGG | 0.462604 | 8.4:+73604648 | None:intergenic |
CCATTGTCAGAATGCCTCCT+TGG | 0.462604 | 8.4:+73604735 | None:intergenic |
ACATTCTCCGAATGCCTCCT+TGG | 0.465413 | 8.4:+73604561 | None:intergenic |
GCTTCAACCAGTTCTGTAGT+TGG | 0.466158 | 8.4:-73602199 | MS.gene53323:CDS |
GGTTCACCCGAACCCTTCTC+AGG | 0.469471 | 8.4:+73604288 | None:intergenic |
TGTCCACCGATGATGTTTCT+GGG | 0.470643 | 8.4:-73600957 | MS.gene53323:CDS |
CGACCAATCGAAGGTCATCT+GGG | 0.470820 | 8.4:-73602405 | MS.gene53323:CDS |
ATACACTCCAACTACAGAAC+TGG | 0.470929 | 8.4:+73602192 | None:intergenic |
GGTAATTTATCACTGGTAGA+TGG | 0.474364 | 8.4:+73603060 | None:intergenic |
AAACCTTCTGAACATAATGC+TGG | 0.474885 | 8.4:-73604516 | MS.gene53323:CDS |
CAATTCAAGCCGGTCCCTGC+TGG | 0.475209 | 8.4:-73599805 | MS.gene53323:CDS |
GCCGTTTGTTGGATGAGGAT+AGG | 0.475919 | 8.4:+73599897 | None:intergenic |
TCCAGATCATCGGGTGTTGT+TGG | 0.476724 | 8.4:-73602130 | MS.gene53323:CDS |
AAGTTGGGGTTGTTGGTGTT+CGG | 0.476725 | 8.4:-73602093 | MS.gene53323:CDS |
AACAGTTACTTGTTGATGCC+TGG | 0.479352 | 8.4:-73599874 | MS.gene53323:CDS |
CTCTATGTTCAGCAGGGGTG+TGG | 0.482137 | 8.4:+73604193 | None:intergenic |
ATTATGTTCAGAAGGTTTGT+GGG | 0.482298 | 8.4:+73604521 | None:intergenic |
GTCAAGATTCTGAGAGCTTG+AGG | 0.482779 | 8.4:+73600831 | None:intergenic |
TCCCTGCTGGTAGTCCTACT+GGG | 0.482852 | 8.4:-73599792 | MS.gene53323:CDS |
AACAGACATGCCAGAAAATG+AGG | 0.486447 | 8.4:+73601901 | None:intergenic |
AAGACAAACAGCAACGGTCC+TGG | 0.487573 | 8.4:-73601400 | MS.gene53323:CDS |
AACATTGTTGGCAGCATGGT+GGG | 0.487977 | 8.4:+73600089 | None:intergenic |
TAATGCTGGGTATAGGGGCT+CGG | 0.488069 | 8.4:-73604502 | MS.gene53323:CDS |
ATTGGAGTTGCAACAGAGCT+TGG | 0.488317 | 8.4:-73601193 | MS.gene53323:CDS |
ACACCCGATGATCTGGAATC+AGG | 0.488847 | 8.4:+73602136 | None:intergenic |
TTTCCACTCCTTATTATGCT+GGG | 0.488886 | 8.4:+73601438 | None:intergenic |
TCTCCTGATTCCAGATCATC+GGG | 0.492397 | 8.4:-73602139 | MS.gene53323:CDS |
GTAATCACTCACAGAGAAGC+CGG | 0.495986 | 8.4:+73600729 | None:intergenic |
ATTATGTTCAGAAGGGTTGT+GGG | 0.496187 | 8.4:+73604347 | None:intergenic |
AGAACGGAAGGTGGTGGTAG+TGG | 0.496637 | 8.4:-73606318 | MS.gene53323:CDS |
TGAATATCCCGGCACAGCCA+TGG | 0.497097 | 8.4:+73599930 | None:intergenic |
CCCTATCCTCATCCAACAAA+CGG | 0.497306 | 8.4:-73599898 | MS.gene53323:CDS |
ATTATGTTCAGAAGGGTTGT+GGG | 0.497420 | 8.4:+73604608 | None:intergenic |
ATTATGTTCAGAAGGGTTGT+GGG | 0.497420 | 8.4:+73604695 | None:intergenic |
GGGTGAACCAAGGAGGCATT+CGG | 0.497947 | 8.4:-73604568 | MS.gene53323:CDS |
CCTGGCATGTTATAGTATTG+AGG | 0.501103 | 8.4:+73598915 | None:intergenic |
TTCTCAACATTATGTTCAGA+AGG | 0.502514 | 8.4:+73604339 | None:intergenic |
TGATATCTATGTTGCTCTCA+AGG | 0.505334 | 8.4:-73606214 | MS.gene53323:CDS |
AATGCCAACGGCCTTAAATA+CGG | 0.506700 | 8.4:-73599835 | MS.gene53323:CDS |
GAGTCCGAATCTCCAGCATC+TGG | 0.506727 | 8.4:-73600892 | MS.gene53323:CDS |
GGAGCCATTAGGCGTGAAGT+TGG | 0.507513 | 8.4:-73602109 | MS.gene53323:CDS |
CCTCAATACTATAACATGCC+AGG | 0.507657 | 8.4:-73598915 | MS.gene53323:CDS |
TTAAGATGGGAACCACCTCC+AGG | 0.508153 | 8.4:+73599856 | None:intergenic |
CCAGCGTGTGAAGGCATGAA+TGG | 0.510230 | 8.4:+73598873 | None:intergenic |
GGTCCTAAATGATGAGGACT+AGG | 0.511740 | 8.4:+73598762 | None:intergenic |
CTGTTGCCGTTTGTTGGATG+AGG | 0.514909 | 8.4:+73599892 | None:intergenic |
AGCCATTAGGCGTGAAGTTG+GGG | 0.516449 | 8.4:-73602107 | MS.gene53323:CDS |
GCTGCTCCTGGAGCACAAGT+TGG | 0.518538 | 8.4:-73598708 | MS.gene53323:CDS |
GCATATCAGCAACCTCAATT+GGG | 0.518594 | 8.4:-73598684 | MS.gene53323:CDS |
GCAGCGTGCGGTGATTGCCC+TGG | 0.518620 | 8.4:+73598897 | None:intergenic |
GAAGGTGGTGGTAGTGGCAC+TGG | 0.520240 | 8.4:-73606312 | MS.gene53323:CDS |
AACCGTTCTGAACATAATGT+TGG | 0.520510 | 8.4:-73604429 | MS.gene53323:CDS |
CACCATCGAGATTGTAGATG+TGG | 0.521036 | 8.4:+73600065 | None:intergenic |
CTCTGTTGTCTCTTACAACA+CGG | 0.521143 | 8.4:+73603130 | None:intergenic |
TGTAGATGTGGGAACATTGT+TGG | 0.523167 | 8.4:+73600077 | None:intergenic |
TATGCACCAACTTGTGCTCC+AGG | 0.523538 | 8.4:+73598702 | None:intergenic |
TTCCCAGCATTATGTTCAGA+AGG | 0.524237 | 8.4:+73604600 | None:intergenic |
TTCCCAGCATTATGTTCAGA+AGG | 0.524237 | 8.4:+73604687 | None:intergenic |
TACTTGTTGATGCCTGGAGG+TGG | 0.525262 | 8.4:-73599868 | MS.gene53323:CDS |
TGCTTTCGAATGCATCAGCA+CGG | 0.527224 | 8.4:-73602270 | MS.gene53323:CDS |
ATCATGTGAATCAGAGTGTA+GGG | 0.527676 | 8.4:-73604776 | MS.gene53323:CDS |
CCATGGGTGGTACATAAACT+GGG | 0.530580 | 8.4:+73599947 | None:intergenic |
AAGGAGAGATCGAAAGAAGG+AGG | 0.530703 | 8.4:-73604913 | MS.gene53323:intron |
AAGGCCGTTGGCATTAAGAT+GGG | 0.531940 | 8.4:+73599843 | None:intergenic |
GAGAAGGAGAGATCGAAAGA+AGG | 0.532624 | 8.4:-73604916 | MS.gene53323:CDS |
GAATATCCCGGCACAGCCAT+GGG | 0.533227 | 8.4:+73599931 | None:intergenic |
CCATCAAAATTCTTCAACAG+TGG | 0.533271 | 8.4:-73602221 | MS.gene53323:CDS |
GGGTATGCCATGTTAGCTCC+AGG | 0.534025 | 8.4:-73599748 | MS.gene53323:CDS |
TTCAAAACTTTGCAAATCCA+GGG | 0.534138 | 8.4:-73599768 | MS.gene53323:CDS |
AGCCCCAGATGACCTTCGAT+TGG | 0.534393 | 8.4:+73602402 | None:intergenic |
GGCATAGGAGCTTGTTGTGG+AGG | 0.535985 | 8.4:+73598783 | None:intergenic |
TTATACTGATTGTTCAAGGA+TGG | 0.536125 | 8.4:+73601872 | None:intergenic |
CCATTCATGCCTTCACACGC+TGG | 0.536134 | 8.4:-73598873 | MS.gene53323:CDS |
ATAGGGGCTCGGGCGAAGCA+AGG | 0.537012 | 8.4:-73604491 | MS.gene53323:CDS |
TACCCAGCATTATGTTCAGA+AGG | 0.538990 | 8.4:+73604513 | None:intergenic |
TCTCTATGTCCCAAATCCTC+AGG | 0.541741 | 8.4:-73599668 | MS.gene53323:intron |
TTATTAGCATTAGAACTACT+AGG | 0.543162 | 8.4:+73602031 | None:intergenic |
CCCAGTTTATGTACCACCCA+TGG | 0.543344 | 8.4:-73599947 | MS.gene53323:CDS |
GTTTGCAGGTAATTTATCAC+TGG | 0.543738 | 8.4:+73603053 | None:intergenic |
AATGCTGGGTATAGGGGCTC+GGG | 0.545810 | 8.4:-73604501 | MS.gene53323:CDS |
ATTGGACAACAAATTTCTGA+AGG | 0.548321 | 8.4:-73598653 | None:intergenic |
CACCTTCCGTTCTTGAAGCA+GGG | 0.549241 | 8.4:+73606328 | None:intergenic |
TCAGAAGCAGCACCAGATGC+TGG | 0.549365 | 8.4:+73600880 | None:intergenic |
GGACTTTAGCAGACAACAAG+TGG | 0.551237 | 8.4:+73606286 | None:intergenic |
TCAGTAACAATGCCGACAGC+TGG | 0.551752 | 8.4:+73601926 | None:intergenic |
GTACCACCCATGGCTGTGCC+GGG | 0.553643 | 8.4:-73599937 | MS.gene53323:CDS |
GAACATAATGCTGGGTATAG+GGG | 0.553827 | 8.4:-73604507 | MS.gene53323:CDS |
CATCCTGAAAATGGTGGTCA+AGG | 0.554701 | 8.4:-73604225 | MS.gene53323:CDS |
GCTTTCGAATGCATCAGCAC+GGG | 0.554806 | 8.4:-73602269 | MS.gene53323:CDS |
TTCGAACTCTATGTTCAGCA+GGG | 0.554828 | 8.4:+73604187 | None:intergenic |
AAGAGGTTCAGTTGTTTGGA+CGG | 0.556504 | 8.4:+73601955 | None:intergenic |
CCAGCAATGGGAAACAATGT+TGG | 0.556956 | 8.4:-73598741 | MS.gene53323:CDS |
TAGGGCACATCAACAACTTG+TGG | 0.557074 | 8.4:-73601846 | MS.gene53323:CDS |
GATGGTGAGTGCTGTTGTGA+AGG | 0.558997 | 8.4:+73603078 | None:intergenic |
AACCTTCTGAACATAATGCT+GGG | 0.560369 | 8.4:-73604515 | MS.gene53323:CDS |
ACCGAGAAGGCATCCTGAGA+AGG | 0.563485 | 8.4:-73604268 | MS.gene53323:CDS |
ACCAAGAAGGCATCCTGAGA+AGG | 0.563485 | 8.4:-73604301 | MS.gene53323:CDS |
AACCCAGTAGGACTACCAGC+AGG | 0.564296 | 8.4:+73599790 | None:intergenic |
GGATGAAACTGGACGAGCGC+AGG | 0.564701 | 8.4:-73600546 | MS.gene53323:CDS |
AACTCCGTATTTAAGGCCGT+TGG | 0.564763 | 8.4:+73599831 | None:intergenic |
AATCATGTGAATCAGAGTGT+AGG | 0.565046 | 8.4:-73604777 | MS.gene53323:CDS |
GAACAATCAGTATAATAGTA+GGG | 0.567528 | 8.4:-73601864 | MS.gene53323:CDS |
GTAGGACTACCAGCAGGGAC+CGG | 0.569087 | 8.4:+73599796 | None:intergenic |
GGAGCTAACATGGCATACCC+TGG | 0.569641 | 8.4:+73599751 | None:intergenic |
CAAGATTCTCACAACATGCC+CGG | 0.569912 | 8.4:-73600748 | MS.gene53323:CDS |
ACCCTTCTGAACATAATGCT+GGG | 0.571179 | 8.4:-73604602 | MS.gene53323:CDS |
ACCCTTCTGAACATAATGCT+GGG | 0.571179 | 8.4:-73604689 | MS.gene53323:CDS |
GAATCAGAGTGTAGGGAACA+GGG | 0.571536 | 8.4:-73604769 | MS.gene53323:CDS |
TGAACATAATGTTGAGAACA+AGG | 0.572986 | 8.4:-73604334 | MS.gene53323:CDS |
ATTAATTATTATACCTCCTG+AGG | 0.573219 | 8.4:+73600512 | None:intergenic |
TGGAGGAGTGTGGTACATGC+CGG | 0.573488 | 8.4:+73598800 | None:intergenic |
CATCATTTAGGACCAGCAAT+GGG | 0.574115 | 8.4:-73598753 | MS.gene53323:CDS |
TGAACATAATGCTGGGAACA+GGG | 0.574342 | 8.4:-73604595 | MS.gene53323:CDS |
TGAACATAATGCTGGGAACA+GGG | 0.574342 | 8.4:-73604682 | MS.gene53323:CDS |
TTAGCTCCAGGCGTGGTTGG+TGG | 0.575156 | 8.4:-73599736 | MS.gene53323:CDS |
TGATGTTTCTGGGAGCAAGC+AGG | 0.575182 | 8.4:-73600947 | MS.gene53323:CDS |
CATTCCATGAGGTGAAGAGA+AGG | 0.575293 | 8.4:-73604932 | MS.gene53323:CDS |
ATGTTAGCTCCAGGCGTGGT+TGG | 0.577782 | 8.4:-73599739 | MS.gene53323:CDS |
TCATCATTTAGGACCAGCAA+TGG | 0.579293 | 8.4:-73598754 | MS.gene53323:CDS |
CCGAGAAGGCATCCTGAGAA+GGG | 0.579612 | 8.4:-73604267 | MS.gene53323:CDS |
CCAAGAAGGCATCCTGAGAA+GGG | 0.579612 | 8.4:-73604300 | MS.gene53323:CDS |
GCTTCAAGAACGGAAGGTGG+TGG | 0.580441 | 8.4:-73606324 | MS.gene53323:CDS |
CAATTGAGGTGACCCAATTG+AGG | 0.582672 | 8.4:+73598672 | None:intergenic |
GGAGCACTGTTTGAATATCC+CGG | 0.582714 | 8.4:+73599919 | None:intergenic |
GGGGACAGAAACTGACGATA+GGG | 0.585471 | 8.4:+73599967 | None:intergenic |
AATGGTCCCTGCTTCAAGAA+CGG | 0.585791 | 8.4:-73606334 | MS.gene53323:CDS |
TCAGAAGGGTTGTGGGATTG+CGG | 0.585836 | 8.4:+73604354 | None:intergenic |
CTCAATACTATAACATGCCA+GGG | 0.585891 | 8.4:-73598914 | MS.gene53323:CDS |
CCAAGGAGGCATTCTGACAA+TGG | 0.586598 | 8.4:-73604648 | MS.gene53323:CDS |
CCAAGGAGGCATTCTGACAA+TGG | 0.586598 | 8.4:-73604735 | MS.gene53323:CDS |
CAGGCCTACGACCCTCCCAC+TGG | 0.586980 | 8.4:-73600599 | MS.gene53323:CDS |
GTCCCTGCTTCAAGAACGGA+AGG | 0.587864 | 8.4:-73606330 | MS.gene53323:CDS |
TCTCAACATTATGTTCAGAA+GGG | 0.588946 | 8.4:+73604340 | None:intergenic |
CAGCTGCATTGAAGTTAGCA+TGG | 0.589358 | 8.4:+73598850 | None:intergenic |
TAATCACTCACAGAGAAGCC+GGG | 0.593037 | 8.4:+73600730 | None:intergenic |
TGCTCTCAAGGAAACTAACA+TGG | 0.593725 | 8.4:-73606202 | MS.gene53323:CDS |
TCCCAGCATTATGTTCAGAA+GGG | 0.594987 | 8.4:+73604601 | None:intergenic |
TCCCAGCATTATGTTCAGAA+GGG | 0.594987 | 8.4:+73604688 | None:intergenic |
AGGGTTCGGGTGAACCGAGA+AGG | 0.595864 | 8.4:-73604281 | MS.gene53323:CDS |
GCAAGGAGGCATTCTGACAA+TGG | 0.596625 | 8.4:-73604474 | MS.gene53323:CDS |
AACCACGCCTGGAGCTAACA+TGG | 0.597097 | 8.4:+73599741 | None:intergenic |
AGGAGGCATTCGGAGAATGT+TGG | 0.597933 | 8.4:-73604558 | MS.gene53323:CDS |
AGGGCACATCAACAACTTGT+GGG | 0.598382 | 8.4:-73601845 | MS.gene53323:CDS |
TGGGAACATTGTTGGCAGCA+TGG | 0.598507 | 8.4:+73600085 | None:intergenic |
ATAACCAGTGGGAGGGTCGT+AGG | 0.598748 | 8.4:+73600595 | None:intergenic |
AATTATTATACCTCCTGAGG+TGG | 0.598783 | 8.4:+73600515 | None:intergenic |
AAATGATGAGGACTAGGCAT+AGG | 0.599460 | 8.4:+73598768 | None:intergenic |
TTCCAACATTATGTTCAGAA+CGG | 0.601696 | 8.4:+73604427 | None:intergenic |
AGGGTTCAAGTGAACCAAGA+AGG | 0.602675 | 8.4:-73604314 | MS.gene53323:CDS |
TTAGCATGGCCAGCGTGTGA+AGG | 0.603027 | 8.4:+73598864 | None:intergenic |
AGGGTTCGGGTGAACCCAGA+AGG | 0.603321 | 8.4:-73604248 | MS.gene53323:CDS |
AATTGTTGGCAATCATTCTG+AGG | 0.604548 | 8.4:-73606238 | MS.gene53323:CDS |
TGGGGACAGAAACTGACGAT+AGG | 0.605335 | 8.4:+73599966 | None:intergenic |
AAGCTCTGTTGCAACTCCAA+TGG | 0.606192 | 8.4:+73601195 | None:intergenic |
GGTGAGTGCTGTTGTGAAGG+AGG | 0.608888 | 8.4:+73603081 | None:intergenic |
TAACAATGCCGACAGCTGGT+TGG | 0.609764 | 8.4:+73601930 | None:intergenic |
TGCAACTCCAATGGTACCAA+AGG | 0.611288 | 8.4:+73601204 | None:intergenic |
GAATATCATAACCAGTGGGA+GGG | 0.611597 | 8.4:+73600588 | None:intergenic |
TGTGATGCTGGAGCATAGGA+TGG | 0.612323 | 8.4:+73600772 | None:intergenic |
GGAGGAGTGTGGTACATGCC+GGG | 0.612734 | 8.4:+73598801 | None:intergenic |
TGAACATAATGTTGGAAACA+GGG | 0.615625 | 8.4:-73604421 | MS.gene53323:CDS |
TTGTTGTGATGCTGGAGCAT+AGG | 0.615905 | 8.4:+73600768 | None:intergenic |
CTTGCTCCCAGAAACATCAT+CGG | 0.617224 | 8.4:+73600951 | None:intergenic |
CTAGGCATAGGAGCTTGTTG+TGG | 0.617414 | 8.4:+73598780 | None:intergenic |
ACAGGGGTTCGGGTGAACCA+AGG | 0.617887 | 8.4:-73604578 | MS.gene53323:CDS |
ACAGGGGTTCGGGTGAACCA+AGG | 0.617887 | 8.4:-73604665 | MS.gene53323:CDS |
ACAGGGGTTCGGGTGAACCA+AGG | 0.617887 | 8.4:-73604752 | MS.gene53323:CDS |
TGTTTCTGGGAGCAAGCAGG+TGG | 0.617897 | 8.4:-73600944 | MS.gene53323:CDS |
GGTTCCCATCTTAATGCCAA+CGG | 0.618440 | 8.4:-73599847 | MS.gene53323:CDS |
GGTTCTTTCACCACCTCAGG+AGG | 0.620624 | 8.4:-73600525 | MS.gene53323:intron |
CATTCGGAGAATGTTGGTCA+AGG | 0.621684 | 8.4:-73604552 | MS.gene53323:CDS |
TGTCTAGCATGTGAATCAGA+AGG | 0.622403 | 8.4:+73602355 | None:intergenic |
ATTACATCTGATGACAAGCA+AGG | 0.622962 | 8.4:-73602295 | MS.gene53323:CDS |
CATACTGAGAATGGTGGTCA+AGG | 0.622986 | 8.4:-73604378 | MS.gene53323:CDS |
CTGCAAACACTTCTGAAAAG+GGG | 0.624872 | 8.4:-73603038 | MS.gene53323:intron |
GGGGCTCGGGCGAAGCAAGG+AGG | 0.625163 | 8.4:-73604488 | MS.gene53323:CDS |
CGGAGTTCAGCAATTCAAGC+CGG | 0.626006 | 8.4:-73599815 | MS.gene53323:CDS |
CAGCAGCTTCGACCAATCGA+AGG | 0.626414 | 8.4:-73602414 | MS.gene53323:CDS |
GGAATATCATAACCAGTGGG+AGG | 0.628434 | 8.4:+73600587 | None:intergenic |
TGCCATGTTAGCTCCAGGCG+TGG | 0.629857 | 8.4:-73599743 | MS.gene53323:CDS |
ACTCAGAAATTGCTTAACCA+AGG | 0.630534 | 8.4:-73606165 | MS.gene53323:intron |
ACCCAGTAGGACTACCAGCA+GGG | 0.631456 | 8.4:+73599791 | None:intergenic |
TTCCAGAAACTGATCGCTGT+CGG | 0.633963 | 8.4:-73601231 | MS.gene53323:CDS |
ATTGCTGGTCCTAAATGATG+AGG | 0.638699 | 8.4:+73598756 | None:intergenic |
TCCCACATCTACAATCTCGA+TGG | 0.639174 | 8.4:-73600067 | MS.gene53323:CDS |
TAATGTGAAAGATGAACTTG+TGG | 0.640277 | 8.4:+73600003 | None:intergenic |
GATGATCTGGAATCAGGAGA+GGG | 0.640457 | 8.4:+73602142 | None:intergenic |
AGATGCTGGAGATTCGGACT+CGG | 0.640805 | 8.4:+73600894 | None:intergenic |
TTTCCCAGCATAATAAGGAG+TGG | 0.643256 | 8.4:-73601441 | MS.gene53323:CDS |
GAACATTGTTGGCAGCATGG+TGG | 0.643529 | 8.4:+73600088 | None:intergenic |
ATAAGGAATATCATAACCAG+TGG | 0.644076 | 8.4:+73600583 | None:intergenic |
TAAATGGGGAATCGGCCACA+AGG | 0.644979 | 8.4:-73601120 | MS.gene53323:intron |
AGCTACTGCAAATTTAAATG+GGG | 0.645765 | 8.4:-73601134 | MS.gene53323:CDS |
TATCCCGGCACAGCCATGGG+TGG | 0.649138 | 8.4:+73599934 | None:intergenic |
CGATGATCTGGAATCAGGAG+AGG | 0.650381 | 8.4:+73602141 | None:intergenic |
TCGAACTCTATGTTCAGCAG+GGG | 0.650805 | 8.4:+73604188 | None:intergenic |
ACCATCGAGATTGTAGATGT+GGG | 0.651315 | 8.4:+73600066 | None:intergenic |
GAACATAATGCTGGGAACAG+GGG | 0.651315 | 8.4:-73604594 | MS.gene53323:CDS |
GAACATAATGCTGGGAACAG+GGG | 0.651315 | 8.4:-73604681 | MS.gene53323:CDS |
CCTGCTTCAAGAACGGAAGG+TGG | 0.654836 | 8.4:-73606327 | MS.gene53323:CDS |
GAACATAATGTTGAGAACAA+GGG | 0.662100 | 8.4:-73604333 | MS.gene53323:CDS |
TAAGGAATATCATAACCAGT+GGG | 0.662162 | 8.4:+73600584 | None:intergenic |
ATGAACTGGATCTGTCGAAG+AGG | 0.662949 | 8.4:+73602168 | None:intergenic |
ACAGACATGCCAGAAAATGA+GGG | 0.663285 | 8.4:+73601902 | None:intergenic |
AGCCTGAAGACAAACAGCAA+CGG | 0.669168 | 8.4:-73601406 | MS.gene53323:CDS |
GCTCCCAGAAACATCATCGG+TGG | 0.670426 | 8.4:+73600954 | None:intergenic |
CCTCTTAGCCAACCAGCTGT+CGG | 0.671389 | 8.4:-73601938 | MS.gene53323:CDS |
AGAAGGCATCCTGAAAATGG+TGG | 0.671714 | 8.4:-73604231 | MS.gene53323:CDS |
AGGAGGCATTCTGACAATGG+TGG | 0.671714 | 8.4:-73604471 | MS.gene53323:CDS |
GAGCTTGTTGTGGAGGAGTG+TGG | 0.671854 | 8.4:+73598790 | None:intergenic |
AAAAGGCATACTGAGAATGG+TGG | 0.676146 | 8.4:-73604384 | MS.gene53323:CDS |
TTATTCAGATCCATTCCATG+AGG | 0.679319 | 8.4:-73604943 | MS.gene53323:intron |
AGGAGGCATTCTGACAATGG+TGG | 0.680525 | 8.4:-73604645 | MS.gene53323:CDS |
AGGAGGCATTCTGACAATGG+TGG | 0.680525 | 8.4:-73604732 | MS.gene53323:CDS |
GGGGTTCGGGTGAACCAAGG+AGG | 0.685100 | 8.4:-73604575 | MS.gene53323:CDS |
GGGGTTCGGGTGAACCAAGG+AGG | 0.685100 | 8.4:-73604662 | MS.gene53323:CDS |
GGGGTTCGGGTGAACCAAGG+AGG | 0.685100 | 8.4:-73604749 | MS.gene53323:CDS |
AATGGGAAACAATGTTGGAG+TGG | 0.687234 | 8.4:-73598736 | MS.gene53323:CDS |
CGGACTCGGAACTTCTAACG+TGG | 0.689748 | 8.4:+73600908 | None:intergenic |
TTAGCATTAGAACTACTAGG+AGG | 0.690754 | 8.4:+73602034 | None:intergenic |
CAACTTGTGGGACATCAGAG+AGG | 0.694691 | 8.4:-73601833 | MS.gene53323:intron |
GACCAATCGAAGGTCATCTG+GGG | 0.697155 | 8.4:-73602404 | MS.gene53323:CDS |
GACTTTAGCAGACAACAAGT+GGG | 0.698158 | 8.4:+73606287 | None:intergenic |
AATCAGAGTGTAGGGAACAG+GGG | 0.702744 | 8.4:-73604768 | MS.gene53323:CDS |
GGCATGAATGGAGCAGCGTG+CGG | 0.714684 | 8.4:+73598885 | None:intergenic |
AGTTACTTGTTGATGCCTGG+AGG | 0.738752 | 8.4:-73599871 | MS.gene53323:CDS |
CATGGGTGGTACATAAACTG+GGG | 0.744782 | 8.4:+73599948 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 73598656 | 73606355 | 73598656 | ID=MS.gene53323 |
chr8.4 | mRNA | 73598656 | 73606355 | 73598656 | ID=MS.gene53323.t1;Parent=MS.gene53323 |
chr8.4 | exon | 73606166 | 73606355 | 73606166 | ID=MS.gene53323.t1.exon1;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73606166 | 73606355 | 73606166 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73604914 | 73604957 | 73604914 | ID=MS.gene53323.t1.exon2;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73604914 | 73604957 | 73604914 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73604160 | 73604805 | 73604160 | ID=MS.gene53323.t1.exon3;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73604160 | 73604805 | 73604160 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73603039 | 73603168 | 73603039 | ID=MS.gene53323.t1.exon4;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73603039 | 73603168 | 73603039 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73601834 | 73602441 | 73601834 | ID=MS.gene53323.t1.exon5;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73601834 | 73602441 | 73601834 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73601121 | 73601463 | 73601121 | ID=MS.gene53323.t1.exon6;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73601121 | 73601463 | 73601121 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73600741 | 73601002 | 73600741 | ID=MS.gene53323.t1.exon7;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73600741 | 73601002 | 73600741 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73600526 | 73600618 | 73600526 | ID=MS.gene53323.t1.exon8;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73600526 | 73600618 | 73600526 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73599669 | 73600121 | 73599669 | ID=MS.gene53323.t1.exon9;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73599669 | 73600121 | 73599669 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
chr8.4 | exon | 73598656 | 73598994 | 73598656 | ID=MS.gene53323.t1.exon10;Parent=MS.gene53323.t1 |
chr8.4 | CDS | 73598656 | 73598994 | 73598656 | ID=cds.MS.gene53323.t1;Parent=MS.gene53323.t1 |
Gene Sequence |
Protein sequence |