AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53977

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53977.t1 MTR_5g071060 95.421 1092 48 1 1 1090 1 1092 0.0 2082
MS.gene53977.t1 MTR_5g071060 92.674 1092 45 2 1 1090 1 1059 0.0 2001
MS.gene53977.t1 MTR_3g464150 57.307 1129 392 26 1 1089 1 1079 0.0 1134
MS.gene53977.t1 MTR_3g070850 37.545 1116 599 26 1 1069 1 1065 0.0 587
MS.gene53977.t1 MTR_4g129230 28.371 1142 571 41 6 1058 6 989 8.31e-95 325
MS.gene53977.t1 MTR_1g090640 29.545 528 285 22 10 497 11 491 3.73e-36 148
MS.gene53977.t1 MTR_2g038200 31.034 551 277 25 1 499 1 500 1.42e-33 140
MS.gene53977.t1 MTR_7g056197 26.043 599 336 17 252 831 59 569 9.06e-32 132
MS.gene53977.t1 MTR_4g127290 38.306 248 136 7 1 245 1 234 6.89e-28 122
MS.gene53977.t1 MTR_4g127290 28.159 277 145 10 683 952 449 678 1.91e-12 72.0
MS.gene53977.t1 MTR_1g057150 29.286 420 219 14 1 377 1 385 1.10e-26 118
MS.gene53977.t1 MTR_1g057150 28.111 217 146 5 636 845 518 731 6.85e-11 67.0
MS.gene53977.t1 MTR_3g461000 25.795 283 160 11 665 937 444 686 2.66e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53977.t1 AT2G29970 40.625 1120 515 38 1 1089 1 1001 0.0 674
MS.gene53977.t1 AT1G07200 39.518 1121 502 35 1 1089 1 977 0.0 666
MS.gene53977.t1 AT2G40130 44.931 434 215 10 1 418 1 426 1.91e-99 336
MS.gene53977.t1 AT2G40130 31.436 404 232 14 678 1076 537 900 5.43e-44 173
MS.gene53977.t1 AT2G40130 44.931 434 215 10 1 418 1 426 2.31e-99 335
MS.gene53977.t1 AT2G40130 31.436 404 232 14 678 1076 534 897 6.17e-44 173
MS.gene53977.t1 AT5G57710 28.739 1110 548 41 6 1045 6 942 4.29e-89 308
MS.gene53977.t1 AT1G07200 33.797 503 238 13 593 1089 7 420 3.52e-64 224
MS.gene53977.t1 AT4G30350 29.779 544 283 19 9 500 9 505 1.23e-39 159
MS.gene53977.t1 AT4G30350 26.933 401 221 12 673 1066 565 900 3.82e-33 139
MS.gene53977.t1 AT3G52490 29.745 548 271 27 1 508 1 474 5.61e-34 141
MS.gene53977.t1 AT3G52490 27.368 190 119 4 666 845 562 742 2.32e-13 75.1
MS.gene53977.t1 AT4G29920 45.087 173 88 5 1 168 1 171 5.70e-25 113
MS.gene53977.t1 AT4G29920 45.087 173 88 5 1 168 1 171 5.78e-25 113
MS.gene53977.t1 AT5G57130 39.691 194 85 6 1 168 1 188 5.69e-23 106

Find 266 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGGGTTTGAGGTTTA+AGG 0.082027 5.2:+60097041 MS.gene53977:CDS
GCACTTGCAGAGACTATATT+TGG 0.207145 5.2:+60100110 MS.gene53977:CDS
GGAAGATTGTTGGAGGTTTA+TGG 0.212659 5.2:+60097186 MS.gene53977:CDS
ATTCCTGTGACCACAGATTT+AGG 0.222965 5.2:+60099702 MS.gene53977:CDS
AATCTGTGGTCACAGGAATT+AGG 0.235180 5.2:-60099698 None:intergenic
GCTGGTGTTGTTGTTGGGTT+TGG 0.239040 5.2:+60097096 MS.gene53977:CDS
AAGTTTGCCTTGGTTTAAAA+AGG 0.259653 5.2:+60098390 MS.gene53977:CDS
TAATTGCATTTGACATCTTT+TGG 0.275201 5.2:-60100504 None:intergenic
TCTTGAAATTCTGAAGTATC+TGG 0.280417 5.2:-60099765 None:intergenic
TAGTGACTTCTGCGATAAAA+TGG 0.284059 5.2:+60100805 MS.gene53977:CDS
ATGTGGATGGCAGGGGTGTT+AGG 0.288051 5.2:+60097145 MS.gene53977:CDS
AAGCTTGAATGATAAGATAT+TGG 0.293607 5.2:+60099317 MS.gene53977:CDS
GTTTGGAGAGATTGAGGTTT+TGG 0.298440 5.2:+60097113 MS.gene53977:CDS
TATGTTATGACTTGTTTATA+AGG 0.308867 5.2:+60100219 MS.gene53977:CDS
CCATTACAAAATCAATTTCA+TGG 0.320358 5.2:-60100763 None:intergenic
TACAGAAAGCATCATCTCTT+TGG 0.321035 5.2:+60100136 MS.gene53977:CDS
ATTTGTACTAAAGCTTCTTT+TGG 0.330714 5.2:-60100552 None:intergenic
GGAAATTGATTACGAGGTTA+TGG 0.331957 5.2:+60100934 MS.gene53977:CDS
AAGACGACGTCGTTCCGTTT+TGG 0.335662 5.2:-60096579 None:intergenic
AGCTTGAATGATAAGATATT+GGG 0.342116 5.2:+60099318 MS.gene53977:CDS
GGGGATGATGTGGATGGCAG+GGG 0.342575 5.2:+60097138 MS.gene53977:CDS
TTGGGTGCTGGTGTTGTTGT+TGG 0.345628 5.2:+60097090 MS.gene53977:CDS
AGTCATAACATAATGACTTT+TGG 0.349616 5.2:-60100208 None:intergenic
TGTTGAGTCTCTGTAACTTT+CGG 0.349845 5.2:-60099597 None:intergenic
AGGTTTATGGTGAGAAAGTT+TGG 0.356739 5.2:+60097199 MS.gene53977:CDS
ATCTGTGGTCACAGGAATTA+GGG 0.357800 5.2:-60099697 None:intergenic
TATTGGGATTTCAAAAGAAA+TGG 0.359140 5.2:+60099334 MS.gene53977:CDS
TTGGGGATGATGTGGATGGC+AGG 0.363611 5.2:+60097136 MS.gene53977:CDS
GCTGATTCTGTTGCTGTCAA+TGG 0.364887 5.2:+60099828 MS.gene53977:CDS
TGGTGGGAGTGAGGAGAAGA+TGG 0.366082 5.2:+60097026 MS.gene53977:CDS
ATGGGGTCCTTTGTTCCATT+TGG 0.373854 5.2:+60098214 MS.gene53977:CDS
TGATGCATTTGTAGAGCTAA+TGG 0.375346 5.2:-60098272 None:intergenic
GAGTTGTTACAAAAGGGTTT+AGG 0.375549 5.2:+60096925 MS.gene53977:CDS
TTTGTAGAAGAACCTGATCT+TGG 0.378115 5.2:+60101109 MS.gene53977:CDS
AGAAGTTGCTGATGCTTTGA+AGG 0.378917 5.2:+60098333 MS.gene53977:CDS
ATTTCCCTTCCACGTGAGTC+TGG 0.379518 5.2:-60100374 None:intergenic
ATGATAAACTTACAGTTTGA+TGG 0.380083 5.2:+60098195 MS.gene53977:intron
CCTCCTTCCCTGCTTCAAAC+AGG 0.382083 5.2:+60099877 MS.gene53977:CDS
AAAGGATTGGGATTTGCATT+TGG 0.382559 5.2:+60097287 MS.gene53977:CDS
GCGACCGGCGTTGATTTGCC+TGG 0.382845 5.2:-60096534 None:intergenic
ATACAATTTGAAAAGACATT+TGG 0.382874 5.2:+60100896 MS.gene53977:CDS
GAGTAGAGTCCTTCCATTGA+AGG 0.383158 5.2:-60097330 None:intergenic
GGAGATTGTTGAGTTTGTTA+AGG 0.384141 5.2:+60097002 MS.gene53977:CDS
TTCCTAGGACCAGATAGAAT+TGG 0.384589 5.2:+60100068 MS.gene53977:CDS
GGGTCCTTTGTTCCATTTGG+TGG 0.393791 5.2:+60098217 MS.gene53977:CDS
AATTGACGAGCGGAGCTTGC+CGG 0.394361 5.2:-60096208 None:intergenic
TTGTTTCCACCTGGGATGTC+TGG 0.396844 5.2:+60096955 MS.gene53977:CDS
TCCGGGTGTGGAAAAGGATT+GGG 0.406256 5.2:+60097275 MS.gene53977:CDS
AAAGGTTGGCTGGCAGAATC+AGG 0.406653 5.2:+60099953 MS.gene53977:CDS
CGAGACATCGATGTCCTGTC+TGG 0.409891 5.2:+60100691 MS.gene53977:CDS
TGGATCTCGGCTTCCAAGAC+GGG 0.411721 5.2:+60100156 MS.gene53977:CDS
TGGGTGCTGGTGTTGTTGTT+GGG 0.412882 5.2:+60097091 MS.gene53977:CDS
AGGTTTGTTGTGTCAGAGTT+GGG 0.413214 5.2:+60097165 MS.gene53977:CDS
TTTGAAGTTGTTTCCGGGTG+TGG 0.415827 5.2:+60097263 MS.gene53977:CDS
AAACTTCTCTTTGAAAAGGT+TGG 0.416418 5.2:+60099939 MS.gene53977:CDS
TAATTTGATGCCGGAGTAGC+AGG 0.416523 5.2:-60098361 None:intergenic
AATCTTGAACCGGGTCGAAC+CGG 0.417626 5.2:+60096772 MS.gene53977:CDS
TGATGATGGGAGGGAGAGTA+AGG 0.423144 5.2:-60096326 None:intergenic
TAATAAACTTCTCTTTGAAA+AGG 0.425033 5.2:+60099935 MS.gene53977:CDS
GGTGGTGGTTTGTTTCCACC+TGG 0.425337 5.2:+60096946 MS.gene53977:CDS
GAGTGTTGTGTGTGTTGAAA+AGG 0.425380 5.2:+60096981 MS.gene53977:CDS
ACAGTTGTGGACTATATTGC+TGG 0.426294 5.2:+60100245 MS.gene53977:CDS
GTGAGGAGAAGATGGGTTTG+AGG 0.428354 5.2:+60097034 MS.gene53977:CDS
ATTGTTGAGTTTGTTAAGGA+TGG 0.431670 5.2:+60097006 MS.gene53977:CDS
CACAGATACTTGCAGCTGCT+TGG 0.434281 5.2:+60100957 MS.gene53977:CDS
AGCATCATCTCTTTGGATCT+CGG 0.436018 5.2:+60100143 MS.gene53977:CDS
GTTGTTTCCGGGTGTGGAAA+AGG 0.437549 5.2:+60097269 MS.gene53977:CDS
TTTGTTGAGTTGTTACAAAA+GGG 0.438236 5.2:+60096919 MS.gene53977:CDS
AGAGTAAGGCGGAGATGGTG+TGG 0.438834 5.2:-60096312 None:intergenic
GTCAGAGTTGGGAAGATTGT+TGG 0.439709 5.2:+60097176 MS.gene53977:CDS
CACGCGCCGCTTCGTCGGTT+AGG 0.441753 5.2:-60096231 None:intergenic
ATTTATGAAGGGACAGAGTT+CGG 0.442318 5.2:-60099992 None:intergenic
TAAGGCGGAGATGGTGTGGA+GGG 0.443371 5.2:-60096308 None:intergenic
AGGTAACGGCTCTTCTACTT+TGG 0.445260 5.2:+60100442 MS.gene53977:CDS
GTCTCTGCTCTTCCCTTCAC+CGG 0.446349 5.2:-60100015 None:intergenic
TGGTGAGAAAGTTTGGTTGA+TGG 0.447072 5.2:+60097206 MS.gene53977:CDS
GAATGAGGTGGAGAAATGTT+TGG 0.447753 5.2:+60097071 MS.gene53977:CDS
TCCCTTCACCGGATTTATGA+AGG 0.447835 5.2:-60100004 None:intergenic
TTCCGGGTGTGGAAAAGGAT+TGG 0.448232 5.2:+60097274 MS.gene53977:CDS
TTTGTTGCCCTGTTTGAAGC+AGG 0.451430 5.2:-60099885 None:intergenic
TGGGGATGATGTGGATGGCA+GGG 0.451943 5.2:+60097137 MS.gene53977:CDS
TGTTGGGTTTGGAGAGATTG+AGG 0.451988 5.2:+60097107 MS.gene53977:CDS
TTGGTTGGGGATGATGTGGA+TGG 0.453556 5.2:+60097132 MS.gene53977:CDS
TTCTCTTTGAAAAGGTTGGC+TGG 0.453729 5.2:+60099943 MS.gene53977:CDS
GTTGAGTTTGTTAAGGATGG+TGG 0.453987 5.2:+60097009 MS.gene53977:CDS
GAGGGAGAGTAAGGCGGAGA+TGG 0.455698 5.2:-60096317 None:intergenic
TTCCAATTCTATCTGGTCCT+AGG 0.457045 5.2:-60100070 None:intergenic
GGGTTTGAGGTTTAAGGAAG+TGG 0.461084 5.2:+60097047 MS.gene53977:CDS
TTACAAAAGGGTTTAGGTGG+TGG 0.462392 5.2:+60096931 MS.gene53977:CDS
GTGACCACAGATTTAGGATT+GGG 0.462584 5.2:+60099708 MS.gene53977:CDS
AAAGATGAATCCTTTGTTGA+TGG 0.463160 5.2:+60096867 MS.gene53977:CDS
GGCAACAAAATTTGATTCAG+TGG 0.466341 5.2:+60099899 MS.gene53977:CDS
TGCATGGTAGAGCAGACATA+TGG 0.466521 5.2:+60100039 MS.gene53977:CDS
CACTCATGGCGGCGATCAAA+CGG 0.468582 5.2:+60096509 MS.gene53977:CDS
GTCAAGATTGTGCGGAGGAA+AGG 0.469511 5.2:+60100575 MS.gene53977:CDS
CGACCGGCGTTGATTTGCCT+GGG 0.469761 5.2:-60096533 None:intergenic
TCATCAACCCCTAAAGGAAA+AGG 0.470426 5.2:-60096802 None:intergenic
GATGCATTTGTAGAGCTAAT+GGG 0.470524 5.2:-60098271 None:intergenic
TAGGTTTGTTGTGTCAGAGT+TGG 0.470591 5.2:+60097164 MS.gene53977:CDS
TACTTCAAGTTAATGCTAGC+TGG 0.471041 5.2:-60101142 None:intergenic
GAAACCGGCGGTTCTTCTAC+CGG 0.471140 5.2:-60096481 None:intergenic
AGAGCTCGAGTGCTCGGAGG+TGG 0.471509 5.2:-60096414 None:intergenic
GACATCTGCTACTCCTTCAA+TGG 0.475124 5.2:+60097317 MS.gene53977:CDS
TGATAAACTTACAGTTTGAT+GGG 0.475168 5.2:+60098196 MS.gene53977:intron
GATTGGGTTGAAAGTGTACT+TGG 0.477070 5.2:+60101007 MS.gene53977:CDS
GAAGGTAGATCCTGCTACTC+CGG 0.477431 5.2:+60098351 MS.gene53977:CDS
GACATATGGTTTGCTTTCCT+AGG 0.481147 5.2:+60100053 MS.gene53977:CDS
TTGGATCTCGGCTTCCAAGA+CGG 0.482403 5.2:+60100155 MS.gene53977:CDS
GTATCTGGCTTGTGAGCAAT+TGG 0.482791 5.2:-60099750 None:intergenic
TCAAGATTGTGCGGAGGAAA+GGG 0.486021 5.2:+60100576 MS.gene53977:CDS
TTTCATTTCTATAACCAAAA+CGG 0.486407 5.2:+60096565 MS.gene53977:CDS
GTGGAGAAATGTTTGGGTGC+TGG 0.487355 5.2:+60097078 MS.gene53977:CDS
TAATGGAAAACTCAGACTCC+TGG 0.488021 5.2:+60100780 MS.gene53977:CDS
GGAGGCGGTGCGAGAATGAC+GGG 0.488251 5.2:-60096393 None:intergenic
GGCAAATCAACGCCGGTCGC+CGG 0.488522 5.2:+60096537 MS.gene53977:CDS
AATGAGGTGGAGAAATGTTT+GGG 0.488902 5.2:+60097072 MS.gene53977:CDS
TTATCCTCGTCTGTCTGTAA+AGG 0.489538 5.2:+60100422 MS.gene53977:CDS
GCCATGAGTGAATTTGAAAC+CGG 0.489790 5.2:-60096496 None:intergenic
ATCTAACGGCGGTTCGAGCT+CGG 0.489847 5.2:-60096369 None:intergenic
TAACGGCTCTTCTACTTTGG+TGG 0.490822 5.2:+60100445 MS.gene53977:CDS
TTGGCTCGCCCCTTCACGTA+TGG 0.491091 5.2:+60099638 MS.gene53977:CDS
TGTTAAGGATGGTGGGAGTG+AGG 0.495256 5.2:+60097017 MS.gene53977:CDS
GGCGGTTCTTCTACCGGCGA+TGG 0.495396 5.2:-60096475 None:intergenic
GCTCGAGTGCTCGGAGGTGG+AGG 0.495597 5.2:-60096411 None:intergenic
CTTGTTGAGTAATTTGATGC+CGG 0.495998 5.2:-60098370 None:intergenic
ATTACTCAACAAGTTTGCCT+TGG 0.498748 5.2:+60098380 MS.gene53977:CDS
AAAATGACATGACGACTCCT+TGG 0.500136 5.2:+60099619 MS.gene53977:CDS
CGAGCGGAGCTTGCCGGCGT+CGG 0.501353 5.2:-60096202 None:intergenic
GGTGAGAAAGTTTGGTTGAT+GGG 0.503389 5.2:+60097207 MS.gene53977:CDS
TCACCTACTCCAGTACATAC+TGG 0.504951 5.2:+60099540 MS.gene53977:CDS
CGAGTGCTCGGAGGTGGAGG+CGG 0.505571 5.2:-60096408 None:intergenic
GGCGGCGATCAAACGGTCCC+AGG 0.505991 5.2:+60096516 MS.gene53977:CDS
GGTTTGAGGTTTAAGGAAGT+GGG 0.506477 5.2:+60097048 MS.gene53977:CDS
TGGCATTCGAAAATCGAGTT+CGG 0.508108 5.2:-60100188 None:intergenic
TAAAGGAAAAGGAGTTAATC+CGG 0.508142 5.2:-60096791 None:intergenic
TTGTTTGTGCGTGGCTGCGA+CGG 0.510635 5.2:-60096282 None:intergenic
AACCGGGTTGATGATTGAAC+CGG 0.511121 5.2:-60096721 None:intergenic
AATGAAAACTCTCCGGCGAC+CGG 0.511335 5.2:-60096549 None:intergenic
TTGAGTTTGTTAAGGATGGT+GGG 0.511403 5.2:+60097010 MS.gene53977:CDS
GTAGAAAAGAATCCACCAAA+TGG 0.511594 5.2:-60098229 None:intergenic
GAATTCTCATCAACCCCTAA+AGG 0.511695 5.2:-60096808 None:intergenic
CTAACTGTACCAGTATGTAC+TGG 0.512199 5.2:-60099549 None:intergenic
GGTGCAGAGTAGTTTGCTGC+AGG 0.512637 5.2:+60100331 MS.gene53977:CDS
GCAAGCGCATCAAAATTGAA+TGG 0.512826 5.2:-60100848 None:intergenic
TGCCCTGTTTGAAGCAGGGA+AGG 0.513387 5.2:-60099880 None:intergenic
TTGACGACGGGAGACGGTCG+AGG 0.513612 5.2:-60096450 None:intergenic
ACTCTGTCCCTTCATAAATC+CGG 0.513671 5.2:+60099996 MS.gene53977:CDS
GCGTCACGGAGGGATGATGA+TGG 0.514891 5.2:-60096340 None:intergenic
AGAGTTGGGAAGATTGTTGG+AGG 0.515988 5.2:+60097179 MS.gene53977:CDS
CCTCTAGACGAGGGTGAAGA+AGG 0.516896 5.2:+60100725 MS.gene53977:CDS
AGGAAGATGGTCTAGAACAT+TGG 0.516907 5.2:-60099473 None:intergenic
GTAAGGCGGAGATGGTGTGG+AGG 0.523351 5.2:-60096309 None:intergenic
TATGGCCAATATGAGTGTAC+TGG 0.523428 5.2:+60099656 MS.gene53977:CDS
TGGAGGCGGTGCGAGAATGA+CGG 0.524842 5.2:-60096394 None:intergenic
TGTGACCACAGATTTAGGAT+TGG 0.525210 5.2:+60099707 MS.gene53977:CDS
AAAGTACCATGCAACTCTTT+AGG 0.525861 5.2:-60099501 None:intergenic
GGCGGAGATGGTGTGGAGGG+AGG 0.527614 5.2:-60096305 None:intergenic
AACCGTAAAACTTCAAGTGA+TGG 0.528776 5.2:-60099399 None:intergenic
AGACGAGGGTGAAGAAGGTA+TGG 0.529865 5.2:+60100730 MS.gene53977:CDS
CTCATATTGGCCATACGTGA+AGG 0.530414 5.2:-60099648 None:intergenic
ATTTGGTTCAGAGTTTCAGT+TGG 0.535616 5.2:+60100913 MS.gene53977:CDS
GGAAGGCATAGTCCAAGATC+AGG 0.536013 5.2:-60101121 None:intergenic
GAAAGTTTGGTTGATGGGTG+CGG 0.536387 5.2:+60097212 MS.gene53977:CDS
GTTTAAGGAAGTGGGGAATG+AGG 0.538693 5.2:+60097056 MS.gene53977:CDS
GGCGGTTCGAGCTCGGCAGA+TGG 0.540656 5.2:-60096362 None:intergenic
GAGGGCACGCGCCGCTTCGT+CGG 0.542555 5.2:-60096236 None:intergenic
GCCGGTTTCAAATTCACTCA+TGG 0.542747 5.2:+60096495 MS.gene53977:CDS
GGCTCTTCTACTTTGGTGGA+AGG 0.543217 5.2:+60100449 MS.gene53977:CDS
TTGTTACAAAAGGGTTTAGG+TGG 0.544335 5.2:+60096928 MS.gene53977:CDS
GGTGGGAGTGAGGAGAAGAT+GGG 0.544512 5.2:+60097027 MS.gene53977:CDS
CCCTTCACCGGATTTATGAA+GGG 0.546292 5.2:-60100003 None:intergenic
TGTCAAATGCAATTACTACT+TGG 0.546960 5.2:+60100512 MS.gene53977:CDS
GATGGGTGCGGCTGAAACGT+CGG 0.547905 5.2:+60097224 MS.gene53977:CDS
CGACGGAGAGCTCGAGTGCT+CGG 0.549248 5.2:-60096420 None:intergenic
GGAGTTAATCCGGTTCGACC+CGG 0.551238 5.2:-60096781 None:intergenic
TCCCTTCATAAATCCGGTGA+AGG 0.551799 5.2:+60100002 MS.gene53977:CDS
TTATAGAAATGAAAACTCTC+CGG 0.553102 5.2:-60096556 None:intergenic
ATGCAACTCTTTAGGCATGT+AGG 0.554422 5.2:-60099493 None:intergenic
GTTGAAAGTGTACTTGGCAA+AGG 0.555158 5.2:+60101013 MS.gene53977:CDS
TCTTTAGGCATGTAGGAAGA+TGG 0.559833 5.2:-60099486 None:intergenic
CAGTTGTGGACTATATTGCT+GGG 0.559986 5.2:+60100246 MS.gene53977:CDS
TCGGTGGGTAAAGCCCGTCT+TGG 0.560389 5.2:-60100169 None:intergenic
CTCCTTCCCTGCTTCAAACA+GGG 0.560465 5.2:+60099878 MS.gene53977:CDS
CGTCACGGAGGGATGATGAT+GGG 0.560907 5.2:-60096339 None:intergenic
GTGGCTGCGACGGCGTGCGA+CGG 0.561777 5.2:-60096272 None:intergenic
AATCCTAAATCTGTGGTCAC+AGG 0.562833 5.2:-60099705 None:intergenic
TCATATTGGCCATACGTGAA+GGG 0.563309 5.2:-60099647 None:intergenic
ACTCGCTTTACTTCAACCAC+CGG 0.565982 5.2:+60096702 MS.gene53977:CDS
GTGGTGGTTTGTTTCCACCT+GGG 0.566364 5.2:+60096947 MS.gene53977:CDS
GAATCAGCTGAAGTAGACTC+TGG 0.567474 5.2:-60099813 None:intergenic
ACCGTAAAACTTCAAGTGAT+GGG 0.569123 5.2:-60099398 None:intergenic
ATCGCAGAAGTCACTAAACC+AGG 0.571418 5.2:-60100798 None:intergenic
ATACGTGAAGGGGCGAGCCA+AGG 0.571568 5.2:-60099636 None:intergenic
CATTCGAAAATCGAGTTCGG+TGG 0.571972 5.2:-60100185 None:intergenic
TGGAGGACTTGATGTGGCAA+AGG 0.573464 5.2:+60098432 MS.gene53977:CDS
GTTTATAAGGAAAACAGTTG+TGG 0.574848 5.2:+60100232 MS.gene53977:CDS
AATTTCCAGACTCACGTGGA+AGG 0.576959 5.2:+60100369 MS.gene53977:CDS
TTTAAATATGCCTCTAGACG+AGG 0.577902 5.2:+60100715 MS.gene53977:CDS
TCGGCAGATGGCGTCACGGA+GGG 0.578202 5.2:-60096350 None:intergenic
TCGTCTGTCTGTAAAGGTAA+CGG 0.578586 5.2:+60100428 MS.gene53977:CDS
AGGCATATTTAAATCCAGAC+AGG 0.579720 5.2:-60100705 None:intergenic
GTTGCCGGCGATGCCGACGC+CGG 0.584264 5.2:+60096189 None:intergenic
CCTTCTTCACCCTCGTCTAG+AGG 0.588762 5.2:-60100725 None:intergenic
TGATGGGAGGGAGAGTAAGG+CGG 0.590678 5.2:-60096323 None:intergenic
ATTTCCAGACTCACGTGGAA+GGG 0.591431 5.2:+60100370 MS.gene53977:CDS
GCATAAACACCCATCAACAA+AGG 0.592078 5.2:-60096877 None:intergenic
CACCGGTTCAATCATCAACC+CGG 0.592321 5.2:+60096719 MS.gene53977:CDS
TTGTTGCCCTGTTTGAAGCA+GGG 0.592806 5.2:-60099884 None:intergenic
TAAGGAAGTGGGGAATGAGG+TGG 0.593311 5.2:+60097059 MS.gene53977:CDS
AAGATGAATCCTTTGTTGAT+GGG 0.593312 5.2:+60096868 MS.gene53977:CDS
CGAGAATGACGGGAATCTAA+CGG 0.596568 5.2:-60096383 None:intergenic
GTCAACGTCTTCATCAAGCA+AGG 0.596891 5.2:+60099367 MS.gene53977:CDS
AAGGACTCTACTCTAAATCC+AGG 0.600682 5.2:+60097340 MS.gene53977:CDS
CCCTTCATAAATCCGGTGAA+GGG 0.600942 5.2:+60100003 MS.gene53977:CDS
TTTCTCTGTAATCTTGAACC+GGG 0.602524 5.2:+60096763 MS.gene53977:CDS
CCTGTTTGAAGCAGGGAAGG+AGG 0.607546 5.2:-60099877 None:intergenic
GAATCCACCAAATGGAACAA+AGG 0.607838 5.2:-60098221 None:intergenic
CCCGTCGTCAAAACCATCGC+CGG 0.609465 5.2:+60096462 MS.gene53977:CDS
ATTCGAAAATCGAGTTCGGT+GGG 0.609664 5.2:-60100184 None:intergenic
AATACTAGTGACTTCAAAGA+GGG 0.612031 5.2:+60100638 MS.gene53977:CDS
ACACTCAAACCAGACATCCC+AGG 0.612939 5.2:-60096964 None:intergenic
CGACGGATACTGCGTCGTCG+AGG 0.612977 5.2:-60096255 None:intergenic
TCAAGTTAATGCTAGCTGGA+AGG 0.613209 5.2:-60101138 None:intergenic
GACGGATACTGCGTCGTCGA+GGG 0.613528 5.2:-60096254 None:intergenic
ATCGCCGGTAGAAGAACCGC+CGG 0.615534 5.2:+60096477 MS.gene53977:CDS
CACGGAGGGATGATGATGGG+AGG 0.615797 5.2:-60096336 None:intergenic
CATATTGGCCATACGTGAAG+GGG 0.617318 5.2:-60099646 None:intergenic
CGTTCCCAATCCTAAATCTG+TGG 0.617888 5.2:-60099712 None:intergenic
ACGGAGGGATGATGATGGGA+GGG 0.620796 5.2:-60096335 None:intergenic
GTTTGAGGTTTAAGGAAGTG+GGG 0.621199 5.2:+60097049 MS.gene53977:CDS
CAACATATTTAGTTACAGTG+TGG 0.622997 5.2:-60101060 None:intergenic
TTGCTGCAGGCAATAAGAAG+AGG 0.623229 5.2:+60100344 MS.gene53977:CDS
TCTGCTACTCCTTCAATGGA+AGG 0.627338 5.2:+60097321 MS.gene53977:CDS
CGAGCACTCGAGCTCTCCGT+CGG 0.635649 5.2:+60096421 MS.gene53977:CDS
GGAGGGAGGTTGTTTGTGCG+TGG 0.636703 5.2:-60096291 None:intergenic
GATAAACTTACAGTTTGATG+GGG 0.638827 5.2:+60098197 MS.gene53977:intron
ATGAGTGAATTTGAAACCGG+CGG 0.640283 5.2:-60096493 None:intergenic
CGGGTTGATGATTGAACCGG+TGG 0.640713 5.2:-60096718 None:intergenic
TCAGTTGGAAATTGATTACG+AGG 0.641742 5.2:+60100928 MS.gene53977:CDS
GTACAAATGTCAAGATTGTG+CGG 0.643353 5.2:+60100567 MS.gene53977:CDS
GGGAAGAGCAGAGACTTGCA+TGG 0.643453 5.2:+60100023 MS.gene53977:CDS
GTCGGTTAGGAATTGACGAG+CGG 0.644119 5.2:-60096218 None:intergenic
TAATACTAGTGACTTCAAAG+AGG 0.644321 5.2:+60100637 MS.gene53977:CDS
TGACGACGGGAGACGGTCGA+GGG 0.650951 5.2:-60096449 None:intergenic
ACGGTCGAGGGATACGCCGA+CGG 0.651457 5.2:-60096437 None:intergenic
TTAAATATGCCTCTAGACGA+GGG 0.653000 5.2:+60100716 MS.gene53977:CDS
GTACCAGTATGTACTGGAGT+AGG 0.655032 5.2:-60099543 None:intergenic
TCAATTCCTAACCGACGAAG+CGG 0.656303 5.2:+60096225 MS.gene53977:CDS
GAGCTCGGCAGATGGCGTCA+CGG 0.656874 5.2:-60096354 None:intergenic
GGGTGCGGCTGAAACGTCGG+AGG 0.656971 5.2:+60097227 MS.gene53977:CDS
GGTAAATTTCCAGACTCACG+TGG 0.662916 5.2:+60100365 MS.gene53977:CDS
CTCGGCAGATGGCGTCACGG+AGG 0.670293 5.2:-60096351 None:intergenic
CGGAGAGCTCGAGTGCTCGG+AGG 0.686678 5.2:-60096417 None:intergenic
GGTTTCAAATTCACTCATGG+CGG 0.693153 5.2:+60096498 MS.gene53977:CDS
ACTACTTGGAGATACATCTG+AGG 0.695415 5.2:+60100526 MS.gene53977:CDS
GGTCCCAGGCAAATCAACGC+CGG 0.698861 5.2:+60096530 MS.gene53977:CDS
AGTTGTGGACTATATTGCTG+GGG 0.699383 5.2:+60100247 MS.gene53977:CDS
CTCAAACCAGACATCCCAGG+TGG 0.704667 5.2:-60096961 None:intergenic
GTTGTTGATGTGGATACACA+TGG 0.707638 5.2:+60098412 MS.gene53977:CDS
TACATGCCTAAAGAGTTGCA+TGG 0.710225 5.2:+60099495 MS.gene53977:CDS
TACACATGGAGGACTTGATG+TGG 0.714812 5.2:+60098426 MS.gene53977:CDS
GAATTCAAGAAGAATAGCTG+AGG 0.716792 5.2:+60096825 MS.gene53977:CDS
CAAATGTCAAGATTGTGCGG+AGG 0.727707 5.2:+60100570 MS.gene53977:CDS
GTTACCTTTACAGACAGACG+AGG 0.728710 5.2:-60100426 None:intergenic
GAATGACGGGAATCTAACGG+CGG 0.781926 5.2:-60096380 None:intergenic
GTTGATGTGGATACACATGG+AGG 0.848293 5.2:+60098415 MS.gene53977:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGTAAAAACATAATAG+AGG - chr5.2:60097894-60097913 None:intergenic 15.0%
!! AATCTACTTCAATAATTTAA+GGG + chr5.2:60098558-60098577 MS.gene53977:intron 15.0%
!! AGTAATTATAGTCATTTATT+TGG + chr5.2:60098661-60098680 MS.gene53977:intron 15.0%
!! TAATCTACTTCAATAATTTA+AGG + chr5.2:60098557-60098576 MS.gene53977:intron 15.0%
!!! ATATACTTTATTTTCGTATA+CGG + chr5.2:60098089-60098108 MS.gene53977:intron 15.0%
!!! TTGATTCTAAAATCAATAAT+TGG - chr5.2:60098749-60098768 None:intergenic 15.0%
!! AAAACCTTCAATCAATAAAA+AGG + chr5.2:60098832-60098851 MS.gene53977:intron 20.0%
!! AAACCTTCAATCAATAAAAA+GGG + chr5.2:60098833-60098852 MS.gene53977:intron 20.0%
!! ATACAATTTGAAAAGACATT+TGG + chr5.2:60100896-60100915 MS.gene53977:CDS 20.0%
!! GTTGTTATATACATACATAT+TGG + chr5.2:60098061-60098080 MS.gene53977:intron 20.0%
!! TGTTAACCTATAAAATGATT+TGG + chr5.2:60099201-60099220 MS.gene53977:intron 20.0%
!! TTTCATTTCTATAACCAAAA+CGG + chr5.2:60096565-60096584 MS.gene53977:CDS 20.0%
!!! AGAAACATTATGCTTTTATT+TGG - chr5.2:60098887-60098906 None:intergenic 20.0%
!!! TAATAAACTTCTCTTTGAAA+AGG + chr5.2:60099935-60099954 MS.gene53977:CDS 20.0%
!!! TATGTTATGACTTGTTTATA+AGG + chr5.2:60100219-60100238 MS.gene53977:CDS 20.0%
!!! TCTAGCTTTAAATTTTAGAA+AGG - chr5.2:60099020-60099039 None:intergenic 20.0%
! AAACATGTGCTATCAAATAA+TGG + chr5.2:60098982-60099001 MS.gene53977:intron 25.0%
! AAGCTTGAATGATAAGATAT+TGG + chr5.2:60099317-60099336 MS.gene53977:CDS 25.0%
! AAGTAGTACGTTAAATTACA+AGG - chr5.2:60097948-60097967 None:intergenic 25.0%
! ACTCAAGAAACAAAATCTTA+CGG - chr5.2:60099250-60099269 None:intergenic 25.0%
! AGCTTGAATGATAAGATATT+GGG + chr5.2:60099318-60099337 MS.gene53977:CDS 25.0%
! ATGATAAACTTACAGTTTGA+TGG + chr5.2:60098195-60098214 MS.gene53977:intron 25.0%
! CAAATTACTTTAACCAGTAT+AGG - chr5.2:60098602-60098621 None:intergenic 25.0%
! CCATTACAAAATCAATTTCA+TGG - chr5.2:60100766-60100785 None:intergenic 25.0%
! GTCATTTATTTGGAAATCAA+TGG + chr5.2:60098671-60098690 MS.gene53977:intron 25.0%
! TAATGAATATGATTGTGACT+TGG + chr5.2:60097713-60097732 MS.gene53977:intron 25.0%
! TATTGGGATTTCAAAAGAAA+TGG + chr5.2:60099334-60099353 MS.gene53977:CDS 25.0%
! TCAACAAAAGAATATTCACA+GGG - chr5.2:60098924-60098943 None:intergenic 25.0%
! TCAGAATCATCATGTATTTA+AGG + chr5.2:60097650-60097669 MS.gene53977:intron 25.0%
! TGATAAACTTACAGTTTGAT+GGG + chr5.2:60098196-60098215 MS.gene53977:intron 25.0%
! TGGAAAAAAGAAAATTGCTT+CGG + chr5.2:60100088-60100107 MS.gene53977:CDS 25.0%
! TTATAGAAATGAAAACTCTC+CGG - chr5.2:60096559-60096578 None:intergenic 25.0%
!! AAGGTTTTTGTTACCTTATT+TGG - chr5.2:60098820-60098839 None:intergenic 25.0%
!! AGAACTCCAAATCATTTTAT+AGG - chr5.2:60099210-60099229 None:intergenic 25.0%
!! AGACAAGAATATCTAAGATT+TGG - chr5.2:60098471-60098490 None:intergenic 25.0%
!! AGTCATAACATAATGACTTT+TGG - chr5.2:60100211-60100230 None:intergenic 25.0%
!! ATTTGTACTAAAGCTTCTTT+TGG - chr5.2:60100555-60100574 None:intergenic 25.0%
!! CTATACTGGTTAAAGTAATT+TGG + chr5.2:60098600-60098619 MS.gene53977:intron 25.0%
!! TAATTGCATTTGACATCTTT+TGG - chr5.2:60100507-60100526 None:intergenic 25.0%
!! TAATTTGTGCCAAATGTTAT+GGG + chr5.2:60097746-60097765 MS.gene53977:intron 25.0%
!! TTTATGCAAAAGATGCTTTT+AGG + chr5.2:60096893-60096912 MS.gene53977:CDS 25.0%
!! TTTCTTTTACTCATGAATGA+TGG - chr5.2:60100611-60100630 None:intergenic 25.0%
!! TTTGTTGAGTTGTTACAAAA+GGG + chr5.2:60096919-60096938 MS.gene53977:CDS 25.0%
!!! AACTTTTTTGCTATCAGTAT+TGG + chr5.2:60099117-60099136 MS.gene53977:intron 25.0%
!!! ACTTTTTTGCTATCAGTATT+GGG + chr5.2:60099118-60099137 MS.gene53977:intron 25.0%
!!! CCATGAAATTGATTTTGTAA+TGG + chr5.2:60100763-60100782 MS.gene53977:CDS 25.0%
!!! TACATTTTCTAGAAAGACAA+CGG - chr5.2:60100294-60100313 None:intergenic 25.0%
!!! TTAATTTGTGCCAAATGTTA+TGG + chr5.2:60097745-60097764 MS.gene53977:intron 25.0%
!!! TTATGGGTTTTTGCTATTTT+TGG + chr5.2:60097762-60097781 MS.gene53977:intron 25.0%
!!! TTCTTTTTTCCAATTCTATC+TGG - chr5.2:60100080-60100099 None:intergenic 25.0%
!!! TTTTGTTGAGTTGTTACAAA+AGG + chr5.2:60096918-60096937 MS.gene53977:CDS 25.0%
AAAGATGAATCCTTTGTTGA+TGG + chr5.2:60096867-60096886 MS.gene53977:CDS 30.0%
AAGATGAATCCTTTGTTGAT+GGG + chr5.2:60096868-60096887 MS.gene53977:CDS 30.0%
AAGTTTGCCTTGGTTTAAAA+AGG + chr5.2:60098390-60098409 MS.gene53977:CDS 30.0%
AATACTAGTGACTTCAAAGA+GGG + chr5.2:60100638-60100657 MS.gene53977:CDS 30.0%
AATAGAGGTTTGAATTGAGT+AGG - chr5.2:60097879-60097898 None:intergenic 30.0%
AATATTGGTCACTATACTAG+TGG - chr5.2:60099058-60099077 None:intergenic 30.0%
ATATGCTAGATTTCCTATAC+TGG + chr5.2:60098586-60098605 MS.gene53977:intron 30.0%
CAACATATTTAGTTACAGTG+TGG - chr5.2:60101063-60101082 None:intergenic 30.0%
CGATAAAATGGATGAAAAAG+TGG + chr5.2:60100817-60100836 MS.gene53977:CDS 30.0%
CTCAACAAAAGAATATTCAC+AGG - chr5.2:60098925-60098944 None:intergenic 30.0%
GATAAACTTACAGTTTGATG+GGG + chr5.2:60098197-60098216 MS.gene53977:intron 30.0%
GGTATAACCAAAACGAATAT+TGG - chr5.2:60099073-60099092 None:intergenic 30.0%
GTTTAAAAAGGTTGTTGATG+TGG + chr5.2:60098402-60098421 MS.gene53977:CDS 30.0%
GTTTATAAGGAAAACAGTTG+TGG + chr5.2:60100232-60100251 MS.gene53977:CDS 30.0%
TAAAGGAAAAGGAGTTAATC+CGG - chr5.2:60096794-60096813 None:intergenic 30.0%
TAAAGTGACTTCTCTCTTTA+GGG - chr5.2:60098629-60098648 None:intergenic 30.0%
TAATACTAGTGACTTCAAAG+AGG + chr5.2:60100637-60100656 MS.gene53977:CDS 30.0%
TAATTTAACGTACTACTTGC+TGG + chr5.2:60097950-60097969 MS.gene53977:intron 30.0%
TAGCAAAAACCCATAACATT+TGG - chr5.2:60097758-60097777 None:intergenic 30.0%
TATACACTTCAACCAAAATC+AGG - chr5.2:60097558-60097577 None:intergenic 30.0%
TCAAGATTACAGAGAAAAAC+CGG - chr5.2:60096760-60096779 None:intergenic 30.0%
TGAAGTGTATAGATGTCTAT+TGG + chr5.2:60097515-60097534 MS.gene53977:intron 30.0%
TGTCAAATGCAATTACTACT+TGG + chr5.2:60100512-60100531 MS.gene53977:CDS 30.0%
TTAAAGTGAATGAGTCACTT+AGG - chr5.2:60098792-60098811 None:intergenic 30.0%
TTATAACTCTTAACATCTGC+AGG + chr5.2:60099278-60099297 MS.gene53977:intron 30.0%
! AAACTTCTCTTTGAAAAGGT+TGG + chr5.2:60099939-60099958 MS.gene53977:CDS 30.0%
! ACAACAGACGAATGAATTTT+TGG - chr5.2:60098046-60098065 None:intergenic 30.0%
! ATAGTGACCAATATTCGTTT+TGG + chr5.2:60099063-60099082 MS.gene53977:intron 30.0%
! ATATTCTTTTGTTGAGCCTA+TGG + chr5.2:60098929-60098948 MS.gene53977:intron 30.0%
! ATTAACTCCTTTTCCTTTAG+GGG + chr5.2:60096795-60096814 MS.gene53977:CDS 30.0%
! CAAAGTTGTGATTTTAAGCA+TGG + chr5.2:60097979-60097998 MS.gene53977:intron 30.0%
! CAACAGACGAATGAATTTTT+GGG - chr5.2:60098045-60098064 None:intergenic 30.0%
! CACTTTAAAGAAGCCAAATA+AGG + chr5.2:60098804-60098823 MS.gene53977:intron 30.0%
! GATTAACTCCTTTTCCTTTA+GGG + chr5.2:60096794-60096813 MS.gene53977:CDS 30.0%
! TAGTTCTATCTATGAAGCAT+AGG + chr5.2:60097364-60097383 MS.gene53977:intron 30.0%
! TATTCTTTTGTTGAGCCTAT+GGG + chr5.2:60098930-60098949 MS.gene53977:intron 30.0%
! TATTTAAGGCAATGCATGTT+TGG + chr5.2:60097664-60097683 MS.gene53977:intron 30.0%
! TCAACAACCTTTTTAAACCA+AGG - chr5.2:60098400-60098419 None:intergenic 30.0%
! TTTTCTCTGTAATCTTGAAC+CGG + chr5.2:60096762-60096781 MS.gene53977:CDS 30.0%
!! ATTGTTGAGTTTGTTAAGGA+TGG + chr5.2:60097006-60097025 MS.gene53977:CDS 30.0%
!! GTAGGTGATAAATGTTTTGA+TGG - chr5.2:60099528-60099547 None:intergenic 30.0%
!! TCAAATAATGGACATGGATT+AGG + chr5.2:60098994-60099013 MS.gene53977:intron 30.0%
!! TCTTGAAATTCTGAAGTATC+TGG - chr5.2:60099768-60099787 None:intergenic 30.0%
!! TGTAGATAAAGCTGATTTTC+TGG + chr5.2:60100310-60100329 MS.gene53977:CDS 30.0%
!!! AAGTTTTTGAAGTTGTTTCC+GGG + chr5.2:60097258-60097277 MS.gene53977:CDS 30.0%
!!! GAAGTTTTTGAAGTTGTTTC+CGG + chr5.2:60097257-60097276 MS.gene53977:CDS 30.0%
AAAGGATTGGGATTTGCATT+TGG + chr5.2:60097287-60097306 MS.gene53977:CDS 35.0%
AACCAGCTTCAGAAAAAACA+CGG - chr5.2:60096663-60096682 None:intergenic 35.0%
AACCGTAAAACTTCAAGTGA+TGG - chr5.2:60099402-60099421 None:intergenic 35.0%
AATGAGGTGGAGAAATGTTT+GGG + chr5.2:60097072-60097091 MS.gene53977:CDS 35.0%
ACACTTCAATTCAATGTGTC+TGG - chr5.2:60097503-60097522 None:intergenic 35.0%
ACCGTAAAACTTCAAGTGAT+GGG - chr5.2:60099401-60099420 None:intergenic 35.0%
AGGCATATTTAAATCCAGAC+AGG - chr5.2:60100708-60100727 None:intergenic 35.0%
AGGTTTATGGTGAGAAAGTT+TGG + chr5.2:60097199-60097218 MS.gene53977:CDS 35.0%
ATGGAACTGTGAGATACAAT+TGG - chr5.2:60098171-60098190 None:intergenic 35.0%
ATTACTCAACAAGTTTGCCT+TGG + chr5.2:60098380-60098399 MS.gene53977:CDS 35.0%
ATTCTTGTCTTGTGCATACT+TGG + chr5.2:60098481-60098500 MS.gene53977:intron 35.0%
ATTTATGAAGGGACAGAGTT+CGG - chr5.2:60099995-60100014 None:intergenic 35.0%
CCTTCAATCAATAAAAAGGG+TGG + chr5.2:60098836-60098855 MS.gene53977:intron 35.0%
CTAAAGTGACTTCTCTCTTT+AGG - chr5.2:60098630-60098649 None:intergenic 35.0%
CTGTAAGTTTATCATGAGCA+TGG - chr5.2:60098190-60098209 None:intergenic 35.0%
CTTCATAGATAGAACTAACC+TGG - chr5.2:60097361-60097380 None:intergenic 35.0%
CTTGTTGAGTAATTTGATGC+CGG - chr5.2:60098373-60098392 None:intergenic 35.0%
GAAAAAACACGGTTCACTAT+TGG - chr5.2:60096652-60096671 None:intergenic 35.0%
GAATTCAAGAAGAATAGCTG+AGG + chr5.2:60096825-60096844 MS.gene53977:CDS 35.0%
GAGTTGTTACAAAAGGGTTT+AGG + chr5.2:60096925-60096944 MS.gene53977:CDS 35.0%
GATGCATTTGTAGAGCTAAT+GGG - chr5.2:60098274-60098293 None:intergenic 35.0%
GCAAGAGGGAAAGATTAATA+AGG - chr5.2:60097812-60097831 None:intergenic 35.0%
GGAAATTGATTACGAGGTTA+TGG + chr5.2:60100934-60100953 MS.gene53977:CDS 35.0%
GGCAACAAAATTTGATTCAG+TGG + chr5.2:60099899-60099918 MS.gene53977:CDS 35.0%
GTACAAATGTCAAGATTGTG+CGG + chr5.2:60100567-60100586 MS.gene53977:CDS 35.0%
GTAGAAAAGAATCCACCAAA+TGG - chr5.2:60098232-60098251 None:intergenic 35.0%
TACACATAATGTGTGCAACA+TGG + chr5.2:60098516-60098535 MS.gene53977:intron 35.0%
TAGTGACTTCTGCGATAAAA+TGG + chr5.2:60100805-60100824 MS.gene53977:CDS 35.0%
TCAGCAACTGCAGATTTATA+TGG - chr5.2:60099094-60099113 None:intergenic 35.0%
TCAGTTGGAAATTGATTACG+AGG + chr5.2:60100928-60100947 MS.gene53977:CDS 35.0%
TGATGCATTTGTAGAGCTAA+TGG - chr5.2:60098275-60098294 None:intergenic 35.0%
TGCATATATGAACCTACAAG+AGG - chr5.2:60097598-60097617 None:intergenic 35.0%
TGTTGAGTCTCTGTAACTTT+CGG - chr5.2:60099600-60099619 None:intergenic 35.0%
TTAAATATGCCTCTAGACGA+GGG + chr5.2:60100716-60100735 MS.gene53977:CDS 35.0%
TTGTTACAAAAGGGTTTAGG+TGG + chr5.2:60096928-60096947 MS.gene53977:CDS 35.0%
TTTAAATATGCCTCTAGACG+AGG + chr5.2:60100715-60100734 MS.gene53977:CDS 35.0%
TTTCTCTGTAATCTTGAACC+GGG + chr5.2:60096763-60096782 MS.gene53977:CDS 35.0%
TTTGATCATTGTAAGCCCAT+AGG - chr5.2:60098948-60098967 None:intergenic 35.0%
TTTGGTTGAAGTGTATACGT+AGG + chr5.2:60097561-60097580 MS.gene53977:intron 35.0%
TTTGTAGAAGAACCTGATCT+TGG + chr5.2:60101109-60101128 MS.gene53977:CDS 35.0%
! AAAGTACCATGCAACTCTTT+AGG - chr5.2:60099504-60099523 None:intergenic 35.0%
! AACCCTTCTAAAAAAGCAAG+AGG - chr5.2:60097827-60097846 None:intergenic 35.0%
! ACCCTTCTAAAAAAGCAAGA+GGG - chr5.2:60097826-60097845 None:intergenic 35.0%
! ATTTGGTTCAGAGTTTCAGT+TGG + chr5.2:60100913-60100932 MS.gene53977:CDS 35.0%
! GGATTAACTCCTTTTCCTTT+AGG + chr5.2:60096793-60096812 MS.gene53977:CDS 35.0%
! GTATAGATGTCTATTGGTTG+TGG + chr5.2:60097521-60097540 MS.gene53977:intron 35.0%
! GTTTGTACTTGTCCTGATTT+TGG + chr5.2:60097543-60097562 MS.gene53977:intron 35.0%
! GTTTTCCAGTACACTCATAT+TGG - chr5.2:60099664-60099683 None:intergenic 35.0%
! TACTTCAAGTTAATGCTAGC+TGG - chr5.2:60101145-60101164 None:intergenic 35.0%
! TCACTTGAAGTTTTACGGTT+TGG + chr5.2:60099402-60099421 MS.gene53977:CDS 35.0%
! TCCCATCACTTGAAGTTTTA+CGG + chr5.2:60099397-60099416 MS.gene53977:CDS 35.0%
!! CCACCCTTTTTATTGATTGA+AGG - chr5.2:60098839-60098858 None:intergenic 35.0%
!! GGAGATTGTTGAGTTTGTTA+AGG + chr5.2:60097002-60097021 MS.gene53977:CDS 35.0%
!! GTGCTATCAAATAATGGACA+TGG + chr5.2:60098988-60099007 MS.gene53977:intron 35.0%
!! TACAGAAAGCATCATCTCTT+TGG + chr5.2:60100136-60100155 MS.gene53977:CDS 35.0%
!! TTGAGTTTGTTAAGGATGGT+GGG + chr5.2:60097010-60097029 MS.gene53977:CDS 35.0%
!!! GCTTTTTTAGAAGGGTTGTT+TGG + chr5.2:60097830-60097849 MS.gene53977:intron 35.0%
!!! TCCCTCTTGCTTTTTTAGAA+GGG + chr5.2:60097822-60097841 MS.gene53977:intron 35.0%
!!! TTCCCTCTTGCTTTTTTAGA+AGG + chr5.2:60097821-60097840 MS.gene53977:intron 35.0%
!!! TTTGACATCTTTTGGCTTCA+AGG - chr5.2:60100499-60100518 None:intergenic 35.0%
AAAATGACATGACGACTCCT+TGG + chr5.2:60099619-60099638 MS.gene53977:CDS 40.0%
AAGGACTCTACTCTAAATCC+AGG + chr5.2:60097340-60097359 MS.gene53977:CDS 40.0%
AAGGCAATGCATGTTTGGAA+TGG + chr5.2:60097669-60097688 MS.gene53977:intron 40.0%
AAGTGAATGAGTCACTTAGG+AGG - chr5.2:60098789-60098808 None:intergenic 40.0%
AATCCTAAATCTGTGGTCAC+AGG - chr5.2:60099708-60099727 None:intergenic 40.0%
AATCTGTGGTCACAGGAATT+AGG - chr5.2:60099701-60099720 None:intergenic 40.0%
ACATAATGTGTGCAACATGG+TGG + chr5.2:60098519-60098538 MS.gene53977:intron 40.0%
ACTACTTGGAGATACATCTG+AGG + chr5.2:60100526-60100545 MS.gene53977:CDS 40.0%
ACTCTGTCCCTTCATAAATC+CGG + chr5.2:60099996-60100015 MS.gene53977:CDS 40.0%
AGAAAAATGCAGTGGAGGAT+TGG + chr5.2:60100990-60101009 MS.gene53977:CDS 40.0%
AGAAGTTGCTGATGCTTTGA+AGG + chr5.2:60098333-60098352 MS.gene53977:CDS 40.0%
AGACAAGAAAAATGCAGTGG+AGG + chr5.2:60100985-60101004 MS.gene53977:CDS 40.0%
AGATTACAGAGAAAAACCGG+CGG - chr5.2:60096757-60096776 None:intergenic 40.0%
AGCAAGCAAGATGCAAAAAC+AGG + chr5.2:60100664-60100683 MS.gene53977:CDS 40.0%
AGCAGACAAGAAAAATGCAG+TGG + chr5.2:60100982-60101001 MS.gene53977:CDS 40.0%
AGCATCATCTCTTTGGATCT+CGG + chr5.2:60100143-60100162 MS.gene53977:CDS 40.0%
AGTGAATGAGTCACTTAGGA+GGG - chr5.2:60098788-60098807 None:intergenic 40.0%
ATAATGTGTGCAACATGGTG+GGG + chr5.2:60098521-60098540 MS.gene53977:intron 40.0%
ATCTGTGGTCACAGGAATTA+GGG - chr5.2:60099700-60099719 None:intergenic 40.0%
ATGCAACTCTTTAGGCATGT+AGG - chr5.2:60099496-60099515 None:intergenic 40.0%
ATTCCTGTGACCACAGATTT+AGG + chr5.2:60099702-60099721 MS.gene53977:CDS 40.0%
CATAATGTGTGCAACATGGT+GGG + chr5.2:60098520-60098539 MS.gene53977:intron 40.0%
CTAACTGTACCAGTATGTAC+TGG - chr5.2:60099552-60099571 None:intergenic 40.0%
CTATCTATGAAGCATAGGCT+CGG + chr5.2:60097369-60097388 MS.gene53977:intron 40.0%
GAAAAATGCAGTGGAGGATT+GGG + chr5.2:60100991-60101010 MS.gene53977:CDS 40.0%
GAATCCACCAAATGGAACAA+AGG - chr5.2:60098224-60098243 None:intergenic 40.0%
GAATGAGGTGGAGAAATGTT+TGG + chr5.2:60097071-60097090 MS.gene53977:CDS 40.0%
GAATTCTCATCAACCCCTAA+AGG - chr5.2:60096811-60096830 None:intergenic 40.0%
GCAAGCGCATCAAAATTGAA+TGG - chr5.2:60100851-60100870 None:intergenic 40.0%
GCACTTGCAGAGACTATATT+TGG + chr5.2:60100110-60100129 MS.gene53977:CDS 40.0%
GCATAAACACCCATCAACAA+AGG - chr5.2:60096880-60096899 None:intergenic 40.0%
GGAAGATTGTTGGAGGTTTA+TGG + chr5.2:60097186-60097205 MS.gene53977:CDS 40.0%
GGTGAGAAAGTTTGGTTGAT+GGG + chr5.2:60097207-60097226 MS.gene53977:CDS 40.0%
GGTTTCAAATTCACTCATGG+CGG + chr5.2:60096498-60096517 MS.gene53977:CDS 40.0%
GTATCTATGTGTCAGTGTTG+TGG - chr5.2:60097412-60097431 None:intergenic 40.0%
GTTGTTGATGTGGATACACA+TGG + chr5.2:60098412-60098431 MS.gene53977:CDS 40.0%
TAATGGAAAACTCAGACTCC+TGG + chr5.2:60100780-60100799 MS.gene53977:CDS 40.0%
TACATGCCTAAAGAGTTGCA+TGG + chr5.2:60099495-60099514 MS.gene53977:CDS 40.0%
TATGGCCAATATGAGTGTAC+TGG + chr5.2:60099656-60099675 MS.gene53977:CDS 40.0%
TCAAGTTAATGCTAGCTGGA+AGG - chr5.2:60101141-60101160 None:intergenic 40.0%
TCATATTGGCCATACGTGAA+GGG - chr5.2:60099650-60099669 None:intergenic 40.0%
TCATCAACCCCTAAAGGAAA+AGG - chr5.2:60096805-60096824 None:intergenic 40.0%
TCGTCTGTCTGTAAAGGTAA+CGG + chr5.2:60100428-60100447 MS.gene53977:CDS 40.0%
TCTTTAGGCATGTAGGAAGA+TGG - chr5.2:60099489-60099508 None:intergenic 40.0%
TGGTGAGAAAGTTTGGTTGA+TGG + chr5.2:60097206-60097225 MS.gene53977:CDS 40.0%
TGTATACGTAGGTACTATGC+AGG + chr5.2:60097572-60097591 MS.gene53977:intron 40.0%
TTACAAAAGGGTTTAGGTGG+TGG + chr5.2:60096931-60096950 MS.gene53977:CDS 40.0%
TTATCCTCGTCTGTCTGTAA+AGG + chr5.2:60100422-60100441 MS.gene53977:CDS 40.0%
TTCCAATTCTATCTGGTCCT+AGG - chr5.2:60100073-60100092 None:intergenic 40.0%
TTCCTAGGACCAGATAGAAT+TGG + chr5.2:60100068-60100087 MS.gene53977:CDS 40.0%
! ACAGTTGTGGACTATATTGC+TGG + chr5.2:60100245-60100264 MS.gene53977:CDS 40.0%
! AGGAAGATGGTCTAGAACAT+TGG - chr5.2:60099476-60099495 None:intergenic 40.0%
! AGTTGTGGACTATATTGCTG+GGG + chr5.2:60100247-60100266 MS.gene53977:CDS 40.0%
! ATGAGTGAATTTGAAACCGG+CGG - chr5.2:60096496-60096515 None:intergenic 40.0%
! CAGTTGTGGACTATATTGCT+GGG + chr5.2:60100246-60100265 MS.gene53977:CDS 40.0%
! CTAATGGGACTTTTGCTTTC+AGG - chr5.2:60098259-60098278 None:intergenic 40.0%
! GAAGATGGGTTTGAGGTTTA+AGG + chr5.2:60097041-60097060 MS.gene53977:CDS 40.0%
! GAGTGTTGTGTGTGTTGAAA+AGG + chr5.2:60096981-60097000 MS.gene53977:CDS 40.0%
! GCCATGAGTGAATTTGAAAC+CGG - chr5.2:60096499-60096518 None:intergenic 40.0%
! GGTTTGAGGTTTAAGGAAGT+GGG + chr5.2:60097048-60097067 MS.gene53977:CDS 40.0%
! GTGACCACAGATTTAGGATT+GGG + chr5.2:60099708-60099727 MS.gene53977:CDS 40.0%
! GTTGAAAGTGTACTTGGCAA+AGG + chr5.2:60101013-60101032 MS.gene53977:CDS 40.0%
! GTTTGAGGTTTAAGGAAGTG+GGG + chr5.2:60097049-60097068 MS.gene53977:CDS 40.0%
! GTTTGGAGAGATTGAGGTTT+TGG + chr5.2:60097113-60097132 MS.gene53977:CDS 40.0%
! TGTGACCACAGATTTAGGAT+TGG + chr5.2:60099707-60099726 MS.gene53977:CDS 40.0%
! TTCTCTTTGAAAAGGTTGGC+TGG + chr5.2:60099943-60099962 MS.gene53977:CDS 40.0%
!! AGGTTTGTTGTGTCAGAGTT+GGG + chr5.2:60097165-60097184 MS.gene53977:CDS 40.0%
!! GACATATGGTTTGCTTTCCT+AGG + chr5.2:60100053-60100072 MS.gene53977:CDS 40.0%
!! GATTGGGTTGAAAGTGTACT+TGG + chr5.2:60101007-60101026 MS.gene53977:CDS 40.0%
!! GTTGAGTTTGTTAAGGATGG+TGG + chr5.2:60097009-60097028 MS.gene53977:CDS 40.0%
!! TAGGTTTGTTGTGTCAGAGT+TGG + chr5.2:60097164-60097183 MS.gene53977:CDS 40.0%
!!! AACCGTGTTTTTTCTGAAGC+TGG + chr5.2:60096658-60096677 MS.gene53977:CDS 40.0%
!!! AGAGATTGAGGTTTTGGTTG+GGG + chr5.2:60097119-60097138 MS.gene53977:CDS 40.0%
!!! GAAGTTTTACGGTTTGGTTC+AGG + chr5.2:60099408-60099427 MS.gene53977:CDS 40.0%
!!! GAGAGATTGAGGTTTTGGTT+GGG + chr5.2:60097118-60097137 MS.gene53977:CDS 40.0%
AATTTCCAGACTCACGTGGA+AGG + chr5.2:60100369-60100388 MS.gene53977:CDS 45.0%
ACTCGCTTTACTTCAACCAC+CGG + chr5.2:60096702-60096721 MS.gene53977:CDS 45.0%
AGAGTTGGGAAGATTGTTGG+AGG + chr5.2:60097179-60097198 MS.gene53977:CDS 45.0%
ATCGCAGAAGTCACTAAACC+AGG - chr5.2:60100801-60100820 None:intergenic 45.0%
ATGGGGTCCTTTGTTCCATT+TGG + chr5.2:60098214-60098233 MS.gene53977:CDS 45.0%
ATTTCCAGACTCACGTGGAA+GGG + chr5.2:60100370-60100389 MS.gene53977:CDS 45.0%
CAAATGTCAAGATTGTGCGG+AGG + chr5.2:60100570-60100589 MS.gene53977:CDS 45.0%
CATATTGGCCATACGTGAAG+GGG - chr5.2:60099649-60099668 None:intergenic 45.0%
CCCTTCACCGGATTTATGAA+GGG - chr5.2:60100006-60100025 None:intergenic 45.0%
CCCTTCATAAATCCGGTGAA+GGG + chr5.2:60100003-60100022 MS.gene53977:CDS 45.0%
CGTTCCCAATCCTAAATCTG+TGG - chr5.2:60099715-60099734 None:intergenic 45.0%
CTCATATTGGCCATACGTGA+AGG - chr5.2:60099651-60099670 None:intergenic 45.0%
GAAGGGTTGTTTGGTAGAAG+TGG + chr5.2:60097839-60097858 MS.gene53977:intron 45.0%
GAATCAGCTGAAGTAGACTC+TGG - chr5.2:60099816-60099835 None:intergenic 45.0%
GACATCTGCTACTCCTTCAA+TGG + chr5.2:60097317-60097336 MS.gene53977:CDS 45.0%
GAGTAGAGTCCTTCCATTGA+AGG - chr5.2:60097333-60097352 None:intergenic 45.0%
GGTAAATTTCCAGACTCACG+TGG + chr5.2:60100365-60100384 MS.gene53977:CDS 45.0%
GTACCAGTATGTACTGGAGT+AGG - chr5.2:60099546-60099565 None:intergenic 45.0%
GTCAACGTCTTCATCAAGCA+AGG + chr5.2:60099367-60099386 MS.gene53977:CDS 45.0%
GTCAGAGTTGGGAAGATTGT+TGG + chr5.2:60097176-60097195 MS.gene53977:CDS 45.0%
GTTACCTTTACAGACAGACG+AGG - chr5.2:60100429-60100448 None:intergenic 45.0%
GTTGATGTGGATACACATGG+AGG + chr5.2:60098415-60098434 MS.gene53977:CDS 45.0%
GTTTAAGGAAGTGGGGAATG+AGG + chr5.2:60097056-60097075 MS.gene53977:CDS 45.0%
TAACGGCTCTTCTACTTTGG+TGG + chr5.2:60100445-60100464 MS.gene53977:CDS 45.0%
TAATGTGTGCAACATGGTGG+GGG + chr5.2:60098522-60098541 MS.gene53977:intron 45.0%
TAATTTGATGCCGGAGTAGC+AGG - chr5.2:60098364-60098383 None:intergenic 45.0%
TACACATGGAGGACTTGATG+TGG + chr5.2:60098426-60098445 MS.gene53977:CDS 45.0%
TCAAGATTGTGCGGAGGAAA+GGG + chr5.2:60100576-60100595 MS.gene53977:CDS 45.0%
TCAATTCCTAACCGACGAAG+CGG + chr5.2:60096225-60096244 MS.gene53977:CDS 45.0%
TCACCTACTCCAGTACATAC+TGG + chr5.2:60099540-60099559 MS.gene53977:CDS 45.0%
TCCCTTCACCGGATTTATGA+AGG - chr5.2:60100007-60100026 None:intergenic 45.0%
TCCCTTCATAAATCCGGTGA+AGG + chr5.2:60100002-60100021 MS.gene53977:CDS 45.0%
TCTGCTACTCCTTCAATGGA+AGG + chr5.2:60097321-60097340 MS.gene53977:CDS 45.0%
TGCATGGTAGAGCAGACATA+TGG + chr5.2:60100039-60100058 MS.gene53977:CDS 45.0%
TGTTGGGTTTGGAGAGATTG+AGG + chr5.2:60097107-60097126 MS.gene53977:CDS 45.0%
TTGCTGCAGGCAATAAGAAG+AGG + chr5.2:60100344-60100363 MS.gene53977:CDS 45.0%
! AGGTAACGGCTCTTCTACTT+TGG + chr5.2:60100442-60100461 MS.gene53977:CDS 45.0%
! ATGGGACTTTTGCTTTCAGG+AGG - chr5.2:60098256-60098275 None:intergenic 45.0%
! CGAGAATGACGGGAATCTAA+CGG - chr5.2:60096386-60096405 None:intergenic 45.0%
! GCCGGTTTCAAATTCACTCA+TGG + chr5.2:60096495-60096514 MS.gene53977:CDS 45.0%
! GCTGATTCTGTTGCTGTCAA+TGG + chr5.2:60099828-60099847 MS.gene53977:CDS 45.0%
! GGGTTTGAGGTTTAAGGAAG+TGG + chr5.2:60097047-60097066 MS.gene53977:CDS 45.0%
! GTATCTGGCTTGTGAGCAAT+TGG - chr5.2:60099753-60099772 None:intergenic 45.0%
! TTGTTGCCCTGTTTGAAGCA+GGG - chr5.2:60099887-60099906 None:intergenic 45.0%
! TTTGAAGTTGTTTCCGGGTG+TGG + chr5.2:60097263-60097282 MS.gene53977:CDS 45.0%
! TTTGTTGCCCTGTTTGAAGC+AGG - chr5.2:60099888-60099907 None:intergenic 45.0%
!! AACCGGGTTGATGATTGAAC+CGG - chr5.2:60096724-60096743 None:intergenic 45.0%
!! GAAAGTTTGGTTGATGGGTG+CGG + chr5.2:60097212-60097231 MS.gene53977:CDS 45.0%
!! GGAGAGATTGAGGTTTTGGT+TGG + chr5.2:60097117-60097136 MS.gene53977:CDS 45.0%
AATCTTGAACCGGGTCGAAC+CGG + chr5.2:60096772-60096791 MS.gene53977:CDS 50.0%
AATGAAAACTCTCCGGCGAC+CGG - chr5.2:60096552-60096571 None:intergenic 50.0%
ACACTCAAACCAGACATCCC+AGG - chr5.2:60096967-60096986 None:intergenic 50.0%
AGACGAGGGTGAAGAAGGTA+TGG + chr5.2:60100730-60100749 MS.gene53977:CDS 50.0%
ATTTCCCTTCCACGTGAGTC+TGG - chr5.2:60100377-60100396 None:intergenic 50.0%
CACAGATACTTGCAGCTGCT+TGG + chr5.2:60100957-60100976 MS.gene53977:CDS 50.0%
CTCCTTCCCTGCTTCAAACA+GGG + chr5.2:60099878-60099897 MS.gene53977:CDS 50.0%
GAAGGTAGATCCTGCTACTC+CGG + chr5.2:60098351-60098370 MS.gene53977:CDS 50.0%
GGCTCTTCTACTTTGGTGGA+AGG + chr5.2:60100449-60100468 MS.gene53977:CDS 50.0%
GGGTCCTTTGTTCCATTTGG+TGG + chr5.2:60098217-60098236 MS.gene53977:CDS 50.0%
GTACTATGCAGGCCTCTTGT+AGG + chr5.2:60097583-60097602 MS.gene53977:intron 50.0%
GTCAAGATTGTGCGGAGGAA+AGG + chr5.2:60100575-60100594 MS.gene53977:CDS 50.0%
GTCGGTTAGGAATTGACGAG+CGG - chr5.2:60096221-60096240 None:intergenic 50.0%
GTGGAGAAATGTTTGGGTGC+TGG + chr5.2:60097078-60097097 MS.gene53977:CDS 50.0%
GTGTTGTGGTGTGTTGTGTC+TGG - chr5.2:60097398-60097417 None:intergenic 50.0%
TAAGGAAGTGGGGAATGAGG+TGG + chr5.2:60097059-60097078 MS.gene53977:CDS 50.0%
TCCGGGTGTGGAAAAGGATT+GGG + chr5.2:60097275-60097294 MS.gene53977:CDS 50.0%
TGGAGGACTTGATGTGGCAA+AGG + chr5.2:60098432-60098451 MS.gene53977:CDS 50.0%
TTCCGGGTGTGGAAAAGGAT+TGG + chr5.2:60097274-60097293 MS.gene53977:CDS 50.0%
TTGGATCTCGGCTTCCAAGA+CGG + chr5.2:60100155-60100174 MS.gene53977:CDS 50.0%
TTGGTTGGGGATGATGTGGA+TGG + chr5.2:60097132-60097151 MS.gene53977:CDS 50.0%
TTGTTTCCACCTGGGATGTC+TGG + chr5.2:60096955-60096974 MS.gene53977:CDS 50.0%
! AAAGGTTGGCTGGCAGAATC+AGG + chr5.2:60099953-60099972 MS.gene53977:CDS 50.0%
! AAGACGACGTCGTTCCGTTT+TGG - chr5.2:60096582-60096601 None:intergenic 50.0%
! GAATGACGGGAATCTAACGG+CGG - chr5.2:60096383-60096402 None:intergenic 50.0%
! GGAAGGCATAGTCCAAGATC+AGG - chr5.2:60101124-60101143 None:intergenic 50.0%
! GTGAGGAGAAGATGGGTTTG+AGG + chr5.2:60097034-60097053 MS.gene53977:CDS 50.0%
! GTTGTTTCCGGGTGTGGAAA+AGG + chr5.2:60097269-60097288 MS.gene53977:CDS 50.0%
! TCCCAATCCTTTTCCACACC+CGG - chr5.2:60097279-60097298 None:intergenic 50.0%
!! CACCGGTTCAATCATCAACC+CGG + chr5.2:60096719-60096738 MS.gene53977:CDS 50.0%
!! GCTGGTGTTGTTGTTGGGTT+TGG + chr5.2:60097096-60097115 MS.gene53977:CDS 50.0%
!! GTGGTGGTTTGTTTCCACCT+GGG + chr5.2:60096947-60096966 MS.gene53977:CDS 50.0%
!! TGATGATGGGAGGGAGAGTA+AGG - chr5.2:60096329-60096348 None:intergenic 50.0%
!! TGGGTGCTGGTGTTGTTGTT+GGG + chr5.2:60097091-60097110 MS.gene53977:CDS 50.0%
!! TGTTAAGGATGGTGGGAGTG+AGG + chr5.2:60097017-60097036 MS.gene53977:CDS 50.0%
!! TTGGGTGCTGGTGTTGTTGT+TGG + chr5.2:60097090-60097109 MS.gene53977:CDS 50.0%
!!! ATGGTTTTGACGACGGGAGA+CGG - chr5.2:60096459-60096478 None:intergenic 50.0%
!!! GGTTTTGGTTGGGGATGATG+TGG + chr5.2:60097128-60097147 MS.gene53977:CDS 50.0%
AATTGACGAGCGGAGCTTGC+CGG - chr5.2:60096211-60096230 None:intergenic 55.0%
ACAGAGAAAAACCGGCGGAG+AGG - chr5.2:60096752-60096771 None:intergenic 55.0%
AGAGTAAGGCGGAGATGGTG+TGG - chr5.2:60096315-60096334 None:intergenic 55.0%
ATCTAACGGCGGTTCGAGCT+CGG - chr5.2:60096372-60096391 None:intergenic 55.0%
CACTCATGGCGGCGATCAAA+CGG + chr5.2:60096509-60096528 MS.gene53977:CDS 55.0%
CCGGCGGAGAGGATAAAAAC+CGG - chr5.2:60096741-60096760 None:intergenic 55.0%
CCTCCTTCCCTGCTTCAAAC+AGG + chr5.2:60099877-60099896 MS.gene53977:CDS 55.0%
CCTCTAGACGAGGGTGAAGA+AGG + chr5.2:60100725-60100744 MS.gene53977:CDS 55.0%
CCTTCTTCACCCTCGTCTAG+AGG - chr5.2:60100728-60100747 None:intergenic 55.0%
CGAGACATCGATGTCCTGTC+TGG + chr5.2:60100691-60100710 MS.gene53977:CDS 55.0%
CGGCGGAGAGGATAAAAACC+GGG - chr5.2:60096740-60096759 None:intergenic 55.0%
CGTCACGGAGGGATGATGAT+GGG - chr5.2:60096342-60096361 None:intergenic 55.0%
CTCAAACCAGACATCCCAGG+TGG - chr5.2:60096964-60096983 None:intergenic 55.0%
GAAACCGGCGGTTCTTCTAC+CGG - chr5.2:60096484-60096503 None:intergenic 55.0%
GGGAAGAGCAGAGACTTGCA+TGG + chr5.2:60100023-60100042 MS.gene53977:CDS 55.0%
GGTGGGAGTGAGGAGAAGAT+GGG + chr5.2:60097027-60097046 MS.gene53977:CDS 55.0%
GTCTCTGCTCTTCCCTTCAC+CGG - chr5.2:60100018-60100037 None:intergenic 55.0%
TAAGGCGGAGATGGTGTGGA+GGG - chr5.2:60096311-60096330 None:intergenic 55.0%
TGATGGGAGGGAGAGTAAGG+CGG - chr5.2:60096326-60096345 None:intergenic 55.0%
TGGATCTCGGCTTCCAAGAC+GGG + chr5.2:60100156-60100175 MS.gene53977:CDS 55.0%
TGGGGATGATGTGGATGGCA+GGG + chr5.2:60097137-60097156 MS.gene53977:CDS 55.0%
TGGTGGGAGTGAGGAGAAGA+TGG + chr5.2:60097026-60097045 MS.gene53977:CDS 55.0%
TTGGGGATGATGTGGATGGC+AGG + chr5.2:60097136-60097155 MS.gene53977:CDS 55.0%
TTGTTTGTGCGTGGCTGCGA+CGG - chr5.2:60096285-60096304 None:intergenic 55.0%
! CCGGTTTTTATCCTCTCCGC+CGG + chr5.2:60096738-60096757 MS.gene53977:CDS 55.0%
! CCTGTTTGAAGCAGGGAAGG+AGG - chr5.2:60099880-60099899 None:intergenic 55.0%
! GGAGTTAATCCGGTTCGACC+CGG - chr5.2:60096784-60096803 None:intergenic 55.0%
! TGCCCTGTTTGAAGCAGGGA+AGG - chr5.2:60099883-60099902 None:intergenic 55.0%
!! ACGGAGGGATGATGATGGGA+GGG - chr5.2:60096338-60096357 None:intergenic 55.0%
!! ATGTGGATGGCAGGGGTGTT+AGG + chr5.2:60097145-60097164 MS.gene53977:CDS 55.0%
!! CGGGTTGATGATTGAACCGG+TGG - chr5.2:60096721-60096740 None:intergenic 55.0%
!! GGTGCAGAGTAGTTTGCTGC+AGG + chr5.2:60100331-60100350 MS.gene53977:CDS 55.0%
!! GGTGGTGGTTTGTTTCCACC+TGG + chr5.2:60096946-60096965 MS.gene53977:CDS 55.0%
!!! ACCGGCGATGGTTTTGACGA+CGG - chr5.2:60096466-60096485 None:intergenic 55.0%
ATACGTGAAGGGGCGAGCCA+AGG - chr5.2:60099639-60099658 None:intergenic 60.0%
ATCGCCGGTAGAAGAACCGC+CGG + chr5.2:60096477-60096496 MS.gene53977:CDS 60.0%
CCCGTCGTCAAAACCATCGC+CGG + chr5.2:60096462-60096481 MS.gene53977:CDS 60.0%
GACGGATACTGCGTCGTCGA+GGG - chr5.2:60096257-60096276 None:intergenic 60.0%
GAGGGAGAGTAAGGCGGAGA+TGG - chr5.2:60096320-60096339 None:intergenic 60.0%
GATGGGTGCGGCTGAAACGT+CGG + chr5.2:60097224-60097243 MS.gene53977:CDS 60.0%
GCGTCACGGAGGGATGATGA+TGG - chr5.2:60096343-60096362 None:intergenic 60.0%
GGAGGGAGGTTGTTTGTGCG+TGG - chr5.2:60096294-60096313 None:intergenic 60.0%
GGGGATGATGTGGATGGCAG+GGG + chr5.2:60097138-60097157 MS.gene53977:CDS 60.0%
GGTCCCAGGCAAATCAACGC+CGG + chr5.2:60096530-60096549 MS.gene53977:CDS 60.0%
GTAAGGCGGAGATGGTGTGG+AGG - chr5.2:60096312-60096331 None:intergenic 60.0%
TCGGTGGGTAAAGCCCGTCT+TGG - chr5.2:60100172-60100191 None:intergenic 60.0%
TGGAGGCGGTGCGAGAATGA+CGG - chr5.2:60096397-60096416 None:intergenic 60.0%
! TTGGCTCGCCCCTTCACGTA+TGG + chr5.2:60099638-60099657 MS.gene53977:CDS 60.0%
!! CACGGAGGGATGATGATGGG+AGG - chr5.2:60096339-60096358 None:intergenic 60.0%
!! CGACCGGCGTTGATTTGCCT+GGG - chr5.2:60096536-60096555 None:intergenic 60.0%
!!! CCGGCGATGGTTTTGACGAC+GGG - chr5.2:60096465-60096484 None:intergenic 60.0%
ACGGTCGAGGGATACGCCGA+CGG - chr5.2:60096440-60096459 None:intergenic 65.0%
AGAGCTCGAGTGCTCGGAGG+TGG - chr5.2:60096417-60096436 None:intergenic 65.0%
CGACGGAGAGCTCGAGTGCT+CGG - chr5.2:60096423-60096442 None:intergenic 65.0%
CGACGGATACTGCGTCGTCG+AGG - chr5.2:60096258-60096277 None:intergenic 65.0%
CGAGCACTCGAGCTCTCCGT+CGG + chr5.2:60096421-60096440 MS.gene53977:CDS 65.0%
GAGCTCGGCAGATGGCGTCA+CGG - chr5.2:60096357-60096376 None:intergenic 65.0%
GGAGGCGGTGCGAGAATGAC+GGG - chr5.2:60096396-60096415 None:intergenic 65.0%
GGCAAATCAACGCCGGTCGC+CGG + chr5.2:60096537-60096556 MS.gene53977:CDS 65.0%
GGCGGTTCTTCTACCGGCGA+TGG - chr5.2:60096478-60096497 None:intergenic 65.0%
TCGGCAGATGGCGTCACGGA+GGG - chr5.2:60096353-60096372 None:intergenic 65.0%
TGACGACGGGAGACGGTCGA+GGG - chr5.2:60096452-60096471 None:intergenic 65.0%
TTGACGACGGGAGACGGTCG+AGG - chr5.2:60096453-60096472 None:intergenic 65.0%
!! GCGACCGGCGTTGATTTGCC+TGG - chr5.2:60096537-60096556 None:intergenic 65.0%
CGAGTGCTCGGAGGTGGAGG+CGG - chr5.2:60096411-60096430 None:intergenic 70.0%
CGGAGAGCTCGAGTGCTCGG+AGG - chr5.2:60096420-60096439 None:intergenic 70.0%
CTCGGCAGATGGCGTCACGG+AGG - chr5.2:60096354-60096373 None:intergenic 70.0%
GCTCGAGTGCTCGGAGGTGG+AGG - chr5.2:60096414-60096433 None:intergenic 70.0%
GGCGGAGATGGTGTGGAGGG+AGG - chr5.2:60096308-60096327 None:intergenic 70.0%
GGCGGCGATCAAACGGTCCC+AGG + chr5.2:60096516-60096535 MS.gene53977:CDS 70.0%
GGCGGTTCGAGCTCGGCAGA+TGG - chr5.2:60096365-60096384 None:intergenic 70.0%
GGGTGCGGCTGAAACGTCGG+AGG + chr5.2:60097227-60097246 MS.gene53977:CDS 70.0%
! CACGCGCCGCTTCGTCGGTT+AGG - chr5.2:60096234-60096253 None:intergenic 70.0%
CGAGCGGAGCTTGCCGGCGT+CGG - chr5.2:60096205-60096224 None:intergenic 75.0%
GTGGCTGCGACGGCGTGCGA+CGG - chr5.2:60096275-60096294 None:intergenic 75.0%
! GAGGGCACGCGCCGCTTCGT+CGG - chr5.2:60096239-60096258 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 60096199 60101165 60096199 ID=MS.gene53977
chr5.2 mRNA 60096199 60101165 60096199 ID=MS.gene53977.t1;Parent=MS.gene53977
chr5.2 exon 60096199 60097361 60096199 ID=MS.gene53977.t1.exon1;Parent=MS.gene53977.t1
chr5.2 CDS 60096199 60097361 60096199 ID=cds.MS.gene53977.t1;Parent=MS.gene53977.t1
chr5.2 exon 60098210 60098453 60098210 ID=MS.gene53977.t1.exon2;Parent=MS.gene53977.t1
chr5.2 CDS 60098210 60098453 60098210 ID=cds.MS.gene53977.t1;Parent=MS.gene53977.t1
chr5.2 exon 60099300 60101165 60099300 ID=MS.gene53977.t1.exon3;Parent=MS.gene53977.t1
chr5.2 CDS 60099300 60101165 60099300 ID=cds.MS.gene53977.t1;Parent=MS.gene53977.t1
Gene Sequence

>MS.gene53977

ATGCCGACGCCGGCAAGCTCCGCTCGTCAATTCCTAACCGACGAAGCGGCGCGTGCCCTCGACGACGCAGTATCCGTCGCACGCCGTCGCAGCCACGCACAAACAACCTCCCTCCACACCATCTCCGCCTTACTCTCCCTCCCATCATCATCCCTCCGTGACGCCATCTGCCGAGCTCGAACCGCCGTTAGATTCCCGTCATTCTCGCACCGCCTCCACCTCCGAGCACTCGAGCTCTCCGTCGGCGTATCCCTCGACCGTCTCCCGTCGTCAAAACCATCGCCGGTAGAAGAACCGCCGGTTTCAAATTCACTCATGGCGGCGATCAAACGGTCCCAGGCAAATCAACGCCGGTCGCCGGAGAGTTTTCATTTCTATAACCAAAACGGAACGACGTCGTCTTTGTTGAAAGTTGAACTGAAACACTTCGTTTTATCGATTCTTGATGATCCAATAGTGAACCGTGTTTTTTCTGAAGCTGGTTTTCGTAGTTGTGATGTTAAACTCGCTTTACTTCAACCACCGGTTCAATCATCAACCCGGTTTTTATCCTCTCCGCCGGTTTTTCTCTGTAATCTTGAACCGGGTCGAACCGGATTAACTCCTTTTCCTTTAGGGGTTGATGAGAATTCAAGAAGAATAGCTGAGGTTATAGCAATGAAAAGTAAAAAGATGAATCCTTTGTTGATGGGTGTTTATGCAAAAGATGCTTTTAGGAATTTTGTTGAGTTGTTACAAAAGGGTTTAGGTGGTGGTTTGTTTCCACCTGGGATGTCTGGTTTGAGTGTTGTGTGTGTTGAAAAGGAGATTGTTGAGTTTGTTAAGGATGGTGGGAGTGAGGAGAAGATGGGTTTGAGGTTTAAGGAAGTGGGGAATGAGGTGGAGAAATGTTTGGGTGCTGGTGTTGTTGTTGGGTTTGGAGAGATTGAGGTTTTGGTTGGGGATGATGTGGATGGCAGGGGTGTTAGGTTTGTTGTGTCAGAGTTGGGAAGATTGTTGGAGGTTTATGGTGAGAAAGTTTGGTTGATGGGTGCGGCTGAAACGTCGGAGGCTTATTCGAAGTTTTTGAAGTTGTTTCCGGGTGTGGAAAAGGATTGGGATTTGCATTTGGTTACTATGACATCTGCTACTCCTTCAATGGAAGGACTCTACTCTAAATCCAGGTTAGTTCTATCTATGAAGCATAGGCTCGGACACCAGACACAACACACCACAACACTGACACATAGATACTGCTAATAATTTAAAAAGTTGAAAGTGATTAAATGTAATCACATGTGATCATGTACACATGTTAGACACCAGACACATTGAATTGAAGTGTATAGATGTCTATTGGTTGTGGTTTGTACTTGTCCTGATTTTGGTTGAAGTGTATACGTAGGTACTATGCAGGCCTCTTGTAGGTTCATATATGCACACATATATCAATATACATTTATAAGAACATTTCAGAATCATCATGTATTTAAGGCAATGCATGTTTGGAATGGTAAGTGAGATCATAGAGAAATTAATGAATATGATTGTGACTTGGTTGTGTTTGTTAATTTGTGCCAAATGTTATGGGTTTTTGCTATTTTTGGTTGCTCTCTGCTGACTTCTGTCTTCCTTATTAATCTTTCCCTCTTGCTTTTTTAGAAGGGTTGTTTGGTAGAAGTGGAATTTTTATGAACACCTACTCAATTCAAACCTCTATTATGTTTTTACTTTTTTTTTTTTTTTTATAGTAAAATGAAAGTTAGTCCTTGTAATTTAACGTACTACTTGCTGGCATTGTCAAAGTTGTGATTTTAAGCATGGATTGTTAGAAAGTTTTCTTTTTTCAAACTCTTATTGTGAGCCCAAAAATTCATTCGTCTGTTGTTATATACATACATATTGGCTACGATATACTTTATTTTCGTATACGGTGCTTTTAAGTTACAAGTCTCTCTTACTGTGTGCACTTTAGCTTCTGACTATTGTACCAATTGTATCTCACAGTTCCATGCTCATGATAAACTTACAGTTTGATGGGGTCCTTTGTTCCATTTGGTGGATTCTTTTCTACACCTCCTGAAAGCAAAAGTCCCATTAGCTCTACAAATGCATCATTTACTCGCTGTGACAAATGCAATGAAAAGTATGAACAAGAAGTTGCTGATGCTTTGAAGGTAGATCCTGCTACTCCGGCATCAAATTACTCAACAAGTTTGCCTTGGTTTAAAAAGGTTGTTGATGTGGATACACATGGAGGACTTGATGTGGCAAAGGTTTGTTATGATCGCCAAATCTTAGATATTCTTGTCTTGTGCATACTTGGCATTCACATGCATACACATAATGTGTGCAACATGGTGGGGGCAATTATTGTGCTAATCTACTTCAATAATTTAAGGGTATCAATATGCTAGATTTCCTATACTGGTTAAAGTAATTTGGCTGCCCTAAAGAGAGAAGTCACTTTAGAGTGTCAAGTAAGTAATTATAGTCATTTATTTGGAAATCAATGGTTGAGATTGTGATCATATGCATGCGTGTTTGACAAACTATGAAGTTTATATGCCAATTATTGATTTTAGAATCAATAGCTAGCTTATTTTACCCTCCTAAGTGACTCATTCACTTTAAAGAAGCCAAATAAGGTAACAAAAACCTTCAATCAATAAAAAGGGTGGAAATTTGATGATTCGCTTGTAAAATCCAAATAAAAGCATAATGTTTCTCTTTTTTATTTTCTCCCTGTGAATATTCTTTTGTTGAGCCTATGGGCTTACAATGATCAAATTTAGATTTATATCAAACATGTGCTATCAAATAATGGACATGGATTAGGCCTTTCTAAAATTTAAAGCTAGATAGCATATTCAACATCCACTAGTATAGTGACCAATATTCGTTTTGGTTATACCATATAAATCTGCAGTTGCTGAAATAACTTTTTTGCTATCAGTATTGGGACACAAGAAAATCATATATTTTCTTTATAACTCTTAAAACATCTGCAAGTTATTCTAGAATGTTAACCTATAAAATGATTTGGAGTTCTATTTTTCTCACGAAGAACCGTAAGATTTTGTTTCTTGAGTTTATATCTTTATAACTCTTAACATCTGCAGGCAAATGAAGAAAATACAAGCTTGAATGATAAGATATTGGGATTTCAAAAGAAATGGAATGATATTTGTCAACGTCTTCATCAAGCAAGGTCTCATGTCCCATCACTTGAAGTTTTACGGTTTGGTTCAGGTTTTAACGAAAGCAGCAGTAAAGATTCGTCACTTAATGAACTCCAATGTTCTAGACCATCTTCCTACATGCCTAAAGAGTTGCATGGTACTTTTCCATCAAAACATTTATCACCTACTCCAGTACATACTGGTACAGTTAGTGTCAATGTTAGAACTGATCATGTGCCGAAAGTTACAGAGACTCAACAAAATGACATGACGACTCCTTGGCTCGCCCCTTCACGTATGGCCAATATGAGTGTACTGGAAAACAAATCATCTTCATCCCTAATTCCTGTGACCACAGATTTAGGATTGGGAACGTTATATACATCAACACCAATTGCTCACAAGCCAGATACTTCAGAATTTCAAGATAAAATAAAGCATTATGAGCACTTTCCAGAGTCTACTTCAGCTGATTCTGTTGCTGTCAATGGAAATACATCACACAAGATTGCTAGATCCTCCTTCCCTGCTTCAAACAGGGCAACAAAATTTGATTCAGTGGATTTCAAGTCTCTTAATAAACTTCTCTTTGAAAAGGTTGGCTGGCAGAATCAGGCGATATGTGATATCAACCGAACTCTGTCCCTTCATAAATCCGGTGAAGGGAAGAGCAGAGACTTGCATGGTAGAGCAGACATATGGTTTGCTTTCCTAGGACCAGATAGAATTGGAAAAAAGAAAATTGCTTCGGCACTTGCAGAGACTATATTTGGAAATACAGAAAGCATCATCTCTTTGGATCTCGGCTTCCAAGACGGGCTTTACCCACCGAACTCGATTTTCGAATGCCAAAAGTCATTATGTTATGACTTGTTTATAAGGAAAACAGTTGTGGACTATATTGCTGGGGAGTTGAGTAAAAATTCTCATTCCGTTGTCTTTCTAGAAAATGTAGATAAAGCTGATTTTCTGGTGCAGAGTAGTTTGCTGCAGGCAATAAGAAGAGGTAAATTTCCAGACTCACGTGGAAGGGAAATAAGCATCAACAATGCAATCTTTCTTTTATCCTCGTCTGTCTGTAAAGGTAACGGCTCTTCTACTTTGGTGGAAGGTAACTTGTTTTCTGAAGAAACAATCCTTGAAGCCAAAAGATGTCAAATGCAATTACTACTTGGAGATACATCTGAGGATGCCAAAAGAAGCTTTAGTACAAATGTCAAGATTGTGCGGAGGAAAGGGTTTTTCAAACCATCATTCATGAGTAAAAGAAAACGAGCTAATACTAGTGACTTCAAAGAGGGAGCAGCAAGCAAGATGCAAAAACAGGTTTGCGAGACATCGATGTCCTGTCTGGATTTAAATATGCCTCTAGACGAGGGTGAAGAAGGTATGGACGACAATGACCATGAAATTGATTTTGTAATGGAAAACTCAGACTCCTGGTTTAGTGACTTCTGCGATAAAATGGATGAAAAAGTGGTTTTCAAGCCATTCAATTTTGATGCGCTTGCTGAACAATTACTAAAAAGCATTAGTATACAATTTGAAAAGACATTTGGTTCAGAGTTTCAGTTGGAAATTGATTACGAGGTTATGGCACAGATACTTGCAGCTGCTTGGTTAGCAGACAAGAAAAATGCAGTGGAGGATTGGGTTGAAAGTGTACTTGGCAAAGGCTTCATTGAAGCTCAGCAGAAATTCCACACTGTAACTAAATATGTTGTGAAACTAGTTAATTGTGAGTCTATTTTTGTAGAAGAACCTGATCTTGGACTATGCCTTCCAGCTAGCATTAACTTGAAGTAA
Protein sequence

>MS.gene53977.t1

MPTPASSARQFLTDEAARALDDAVSVARRRSHAQTTSLHTISALLSLPSSSLRDAICRARTAVRFPSFSHRLHLRALELSVGVSLDRLPSSKPSPVEEPPVSNSLMAAIKRSQANQRRSPESFHFYNQNGTTSSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQPPVQSSTRFLSSPPVFLCNLEPGRTGLTPFPLGVDENSRRIAEVIAMKSKKMNPLLMGVYAKDAFRNFVELLQKGLGGGLFPPGMSGLSVVCVEKEIVEFVKDGGSEEKMGLRFKEVGNEVEKCLGAGVVVGFGEIEVLVGDDVDGRGVRFVVSELGRLLEVYGEKVWLMGAAETSEAYSKFLKLFPGVEKDWDLHLVTMTSATPSMEGLYSKSSLMGSFVPFGGFFSTPPESKSPISSTNASFTRCDKCNEKYEQEVADALKVDPATPASNYSTSLPWFKKVVDVDTHGGLDVAKANEENTSLNDKILGFQKKWNDICQRLHQARSHVPSLEVLRFGSGFNESSSKDSSLNELQCSRPSSYMPKELHGTFPSKHLSPTPVHTGTVSVNVRTDHVPKVTETQQNDMTTPWLAPSRMANMSVLENKSSSSLIPVTTDLGLGTLYTSTPIAHKPDTSEFQDKIKHYEHFPESTSADSVAVNGNTSHKIARSSFPASNRATKFDSVDFKSLNKLLFEKVGWQNQAICDINRTLSLHKSGEGKSRDLHGRADIWFAFLGPDRIGKKKIASALAETIFGNTESIISLDLGFQDGLYPPNSIFECQKSLCYDLFIRKTVVDYIAGELSKNSHSVVFLENVDKADFLVQSSLLQAIRRGKFPDSRGREISINNAIFLLSSSVCKGNGSSTLVEGNLFSEETILEAKRCQMQLLLGDTSEDAKRSFSTNVKIVRRKGFFKPSFMSKRKRANTSDFKEGAASKMQKQVCETSMSCLDLNMPLDEGEEGMDDNDHEIDFVMENSDSWFSDFCDKMDEKVVFKPFNFDALAEQLLKSISIQFEKTFGSEFQLEIDYEVMAQILAAAWLADKKNAVEDWVESVLGKGFIEAQQKFHTVTKYVVKLVNCESIFVEEPDLGLCLPASINLK