AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54060.t1 MTR_1g009720 98.632 950 13 0 1 950 1 950 0.0 1932
MS.gene54060.t1 MTR_8g063880 93.474 950 61 1 1 950 1 949 0.0 1779
MS.gene54060.t1 MTR_1g009760 88.118 951 112 1 1 950 1 951 0.0 1698
MS.gene54060.t1 MTR_3g108800 86.646 951 126 1 1 950 1 951 0.0 1679
MS.gene54060.t1 MTR_3g108800 86.966 936 121 1 16 950 15 950 0.0 1658
MS.gene54060.t1 MTR_4g127710 82.824 949 160 2 3 950 6 952 0.0 1620
MS.gene54060.t1 MTR_4g127710 82.872 940 158 2 3 941 6 943 0.0 1605
MS.gene54060.t1 MTR_2g036650 81.828 952 170 2 2 950 7 958 0.0 1590
MS.gene54060.t1 MTR_2g104860 80.781 947 181 1 5 950 3 949 0.0 1565
MS.gene54060.t1 MTR_4g116950 79.495 951 191 2 1 950 1 948 0.0 1531
MS.gene54060.t1 MTR_4g107500 78.211 950 203 1 5 950 9 958 0.0 1510
MS.gene54060.t1 MTR_6g011310 77.754 944 206 1 11 950 13 956 0.0 1493
MS.gene54060.t1 MTR_2g449840 80.670 895 173 0 4 898 5 899 0.0 1485
MS.gene54060.t1 MTR_6g011310 77.436 944 204 2 11 950 13 951 0.0 1477
MS.gene54060.t1 MTR_7g117500 73.835 944 243 3 7 950 14 953 0.0 1425
MS.gene54060.t1 MTR_1g009760 90.561 784 74 0 16 799 19 802 0.0 1425
MS.gene54060.t1 MTR_8g006790 73.651 964 238 4 2 950 4 966 0.0 1397
MS.gene54060.t1 MTR_7g117500 72.775 944 242 4 7 950 14 942 0.0 1397
MS.gene54060.t1 MTR_8g089870 25.608 699 438 20 34 672 29 705 1.51e-50 192
MS.gene54060.t1 MTR_8g090125 26.069 725 423 28 33 671 87 784 1.51e-48 187
MS.gene54060.t1 MTR_8g446010 26.190 714 421 25 34 660 88 782 2.32e-48 187
MS.gene54060.t1 MTR_4g043690 24.118 709 435 22 34 656 135 826 3.02e-47 183
MS.gene54060.t1 MTR_0005s0140 23.983 713 431 22 34 656 50 741 3.17e-47 183
MS.gene54060.t1 MTR_4g096990 25.575 696 434 21 34 656 136 820 6.61e-46 179
MS.gene54060.t1 MTR_4g008650 24.451 728 449 21 33 681 131 836 8.17e-46 178
MS.gene54060.t1 MTR_4g008650 24.373 718 442 21 33 671 131 826 8.46e-46 179
MS.gene54060.t1 MTR_8g045070 26.248 701 414 26 34 660 88 759 3.05e-45 177
MS.gene54060.t1 MTR_5g015590 25.952 709 427 24 43 674 145 832 3.28e-45 177
MS.gene54060.t1 MTR_5g015590 25.952 709 427 24 43 674 145 832 3.70e-45 176
MS.gene54060.t1 MTR_5g015590 25.811 709 428 24 43 674 145 832 4.79e-45 176
MS.gene54060.t1 MTR_3g103070 25.136 736 447 25 21 674 121 834 1.38e-44 175
MS.gene54060.t1 MTR_2g038310 24.648 710 421 21 43 656 183 874 5.30e-42 167
MS.gene54060.t1 MTR_2g038310 24.648 710 421 21 43 656 183 874 7.37e-42 166
MS.gene54060.t1 MTR_2g105830 24.854 684 415 21 41 635 183 856 1.31e-41 165
MS.gene54060.t1 MTR_3g103070 25.000 660 402 20 89 674 18 658 8.62e-41 162
MS.gene54060.t1 MTR_7g095710 25.329 608 369 16 133 656 245 851 3.30e-40 161
MS.gene54060.t1 MTR_5g015590 26.398 644 385 22 43 610 145 775 4.00e-39 157
MS.gene54060.t1 MTR_4g008170 23.395 701 441 21 43 656 196 887 6.82e-39 157
MS.gene54060.t1 MTR_4g008170 23.546 705 442 21 43 656 196 894 1.11e-38 156
MS.gene54060.t1 MTR_6g016470 22.361 720 438 22 38 656 119 818 1.54e-37 152
MS.gene54060.t1 MTR_8g071890 67.532 77 25 0 389 465 15 91 1.58e-31 122
MS.gene54060.t1 MTR_3g103270 30.267 337 204 10 424 731 541 875 1.80e-31 133
MS.gene54060.t1 MTR_3g103270 29.204 339 211 7 33 343 53 390 2.47e-27 120
MS.gene54060.t1 MTR_8g027160 29.282 362 213 8 32 354 31 388 1.26e-30 130
MS.gene54060.t1 MTR_8g027160 29.317 249 135 6 397 608 505 749 6.29e-17 86.3
MS.gene54060.t1 MTR_8g027160 29.282 362 213 8 32 354 31 388 1.40e-30 130
MS.gene54060.t1 MTR_8g027160 29.317 249 135 6 397 608 505 749 9.87e-17 85.5
MS.gene54060.t1 MTR_8g027160 29.282 362 213 8 32 354 31 388 1.84e-30 130
MS.gene54060.t1 MTR_8g027160 29.394 330 190 8 397 687 505 830 3.75e-27 119
MS.gene54060.t1 MTR_8g027160 29.282 362 213 8 32 354 31 388 2.19e-30 130
MS.gene54060.t1 MTR_8g027160 28.084 381 223 9 397 730 505 881 1.31e-27 121
MS.gene54060.t1 MTR_5g034880 68.354 79 24 1 388 465 75 153 5.84e-30 117
MS.gene54060.t1 MTR_7g100110 28.338 367 219 10 21 343 31 397 3.56e-29 126
MS.gene54060.t1 MTR_7g100110 34.307 274 153 8 481 734 637 903 2.31e-27 120
MS.gene54060.t1 MTR_6g052990 64.000 75 27 0 389 463 185 259 1.48e-27 114
MS.gene54060.t1 MTR_2g035840 23.548 620 378 19 72 656 375 933 4.08e-24 109
MS.gene54060.t1 MTR_1g066630 86.000 50 7 0 465 514 51 100 2.31e-23 95.9
MS.gene54060.t1 MTR_4g094232 24.104 614 361 17 95 664 331 883 5.47e-22 102
MS.gene54060.t1 MTR_4g127580 24.660 661 387 28 63 685 106 693 3.48e-21 100
MS.gene54060.t1 MTR_8g012390 24.587 545 310 16 143 656 430 904 7.87e-21 99.4
MS.gene54060.t1 MTR_8g013780 26.224 286 172 8 402 656 93 370 1.23e-20 97.4
MS.gene54060.t1 MTR_2g036380 23.008 665 405 22 61 690 9 601 2.50e-18 90.9
MS.gene54060.t1 MTR_2g036380 23.008 665 405 22 61 690 99 691 4.71e-18 90.1
MS.gene54060.t1 MTR_2g036380 23.827 554 328 17 155 690 31 508 7.36e-18 89.0
MS.gene54060.t1 MTR_2g036380 23.827 554 328 17 155 690 62 539 1.10e-17 88.6
MS.gene54060.t1 MTR_5g057940 73.810 42 11 0 389 430 15 56 3.66e-16 76.6
MS.gene54060.t1 MTR_5g057940 73.810 42 11 0 389 430 15 56 5.43e-16 77.0
MS.gene54060.t1 MTR_8g079250 30.851 188 93 2 480 660 787 944 1.17e-15 82.4
MS.gene54060.t1 MTR_8g013810 22.121 330 219 11 43 338 122 447 1.73e-15 80.9
MS.gene54060.t1 MTR_1g009740 67.347 49 16 0 870 918 13 61 2.99e-15 71.2
MS.gene54060.t1 MTR_5g010420 27.692 195 101 4 480 664 778 942 3.26e-13 74.3
MS.gene54060.t1 MTR_4g094695 25.568 176 101 2 481 656 789 934 1.36e-12 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54060.t1 AT2G07560 81.521 947 173 2 4 950 5 949 0.0 1591
MS.gene54060.t1 AT2G24520 80.655 946 182 1 6 950 49 994 0.0 1580
MS.gene54060.t1 AT4G30190 82.893 947 160 2 5 950 3 948 0.0 1580
MS.gene54060.t1 AT2G18960 82.558 946 164 1 6 950 4 949 0.0 1575
MS.gene54060.t1 AT3G42640 80.614 944 180 2 7 950 8 948 0.0 1569
MS.gene54060.t1 AT4G30190 80.102 980 160 3 5 950 3 981 0.0 1562
MS.gene54060.t1 AT2G24520 80.988 931 176 1 21 950 1 931 0.0 1562
MS.gene54060.t1 AT2G24520 80.988 931 176 1 21 950 1 931 0.0 1562
MS.gene54060.t1 AT1G80660 80.317 945 185 1 7 950 10 954 0.0 1558
MS.gene54060.t1 AT5G57350 81.257 939 175 1 6 943 5 943 0.0 1545
MS.gene54060.t1 AT5G57350 81.257 939 175 1 6 943 5 943 0.0 1545
MS.gene54060.t1 AT5G57350 81.257 939 175 1 6 943 5 943 0.0 1545
MS.gene54060.t1 AT1G80660 80.631 919 177 1 7 924 10 928 0.0 1521
MS.gene54060.t1 AT1G80660 80.963 914 173 1 7 919 10 923 0.0 1520
MS.gene54060.t1 AT5G62670 78.925 949 196 1 6 950 8 956 0.0 1513
MS.gene54060.t1 AT3G47950 78.504 949 200 1 6 950 12 960 0.0 1508
MS.gene54060.t1 AT3G47950 78.504 949 200 1 6 950 12 960 0.0 1508
MS.gene54060.t1 AT2G18960 83.503 885 145 1 67 950 1 885 0.0 1483
MS.gene54060.t1 AT2G18960 83.503 885 145 1 67 950 1 885 0.0 1483
MS.gene54060.t1 AT1G80660 80.485 825 160 1 127 950 1 825 0.0 1406
MS.gene54060.t1 AT3G60330 71.324 959 257 4 6 950 7 961 0.0 1388
MS.gene54060.t1 AT3G60330 71.324 959 257 4 6 950 7 961 0.0 1388
MS.gene54060.t1 AT3G60330 71.116 959 259 4 6 950 7 961 0.0 1386
MS.gene54060.t1 AT3G60330 71.116 959 259 4 6 950 7 961 0.0 1386
MS.gene54060.t1 AT1G17260 70.657 944 268 2 7 950 13 947 0.0 1340
MS.gene54060.t1 AT2G24520 81.541 688 126 1 264 950 1 688 0.0 1184
MS.gene54060.t1 AT5G57350 80.323 681 133 1 264 943 1 681 0.0 1148
MS.gene54060.t1 AT4G11730 63.283 463 160 5 5 464 6 461 0.0 593
MS.gene54060.t1 AT4G11730 69.366 284 85 2 569 851 480 762 3.14e-123 394
MS.gene54060.t1 AT1G07810 26.881 904 467 32 4 736 9 889 8.86e-53 201
MS.gene54060.t1 AT3G22910 26.174 596 363 18 133 656 224 814 3.74e-47 183
MS.gene54060.t1 AT5G57110 24.965 709 417 22 43 656 164 852 2.57e-46 181
MS.gene54060.t1 AT5G57110 24.965 709 417 22 43 656 164 852 2.57e-46 181
MS.gene54060.t1 AT5G57110 24.965 709 417 22 43 656 164 852 2.57e-46 181
MS.gene54060.t1 AT4G29900 24.684 713 418 22 43 656 164 856 1.10e-45 179
MS.gene54060.t1 AT4G29900 24.684 713 418 22 43 656 164 856 1.10e-45 179
MS.gene54060.t1 AT1G27770 24.964 701 433 22 36 656 138 825 1.51e-45 178
MS.gene54060.t1 AT1G27770 24.964 701 433 22 36 656 138 825 1.51e-45 178
MS.gene54060.t1 AT1G27770 24.964 701 433 22 36 656 75 762 1.62e-45 178
MS.gene54060.t1 AT3G57330 23.916 715 443 23 33 671 131 820 2.61e-45 177
MS.gene54060.t1 AT3G57330 23.916 715 443 23 33 671 76 765 2.80e-45 177
MS.gene54060.t1 AT2G22950 24.897 727 442 24 30 674 129 833 4.03e-45 177
MS.gene54060.t1 AT4G37640 24.615 715 422 25 34 656 133 822 5.46e-43 170
MS.gene54060.t1 AT2G41560 24.531 746 451 30 10 671 4 721 1.28e-41 165
MS.gene54060.t1 AT2G41560 24.531 746 451 30 10 671 4 721 1.28e-41 165
MS.gene54060.t1 AT2G41560 24.531 746 451 30 10 671 4 721 1.28e-41 165
MS.gene54060.t1 AT2G41560 24.523 734 443 29 21 671 118 823 1.30e-41 166
MS.gene54060.t1 AT3G21180 23.506 753 463 27 4 656 130 869 3.32e-40 161
MS.gene54060.t1 AT3G63380 23.232 693 453 19 38 656 131 818 3.17e-35 145
MS.gene54060.t1 AT1G10130 28.051 467 289 15 424 844 510 975 3.59e-34 142
MS.gene54060.t1 AT1G10130 30.028 353 215 12 21 343 9 359 1.09e-27 121
MS.gene54060.t1 AT1G07670 29.948 384 208 13 21 353 31 404 6.53e-32 135
MS.gene54060.t1 AT1G07670 31.269 323 169 9 457 736 577 889 1.15e-28 124
MS.gene54060.t1 AT1G07670 29.948 384 208 13 21 353 31 404 6.53e-32 135
MS.gene54060.t1 AT1G07670 31.269 323 169 9 457 736 577 889 1.15e-28 124
MS.gene54060.t1 AT4G00900 29.545 440 224 15 396 780 500 908 8.76e-32 134
MS.gene54060.t1 AT4G00900 29.888 358 198 10 33 342 27 379 2.45e-29 126
MS.gene54060.t1 AT4G00900 29.545 440 224 15 396 780 500 908 8.76e-32 134
MS.gene54060.t1 AT4G00900 29.888 358 198 10 33 342 27 379 2.45e-29 126
MS.gene54060.t1 AT5G44790 23.244 598 354 17 101 656 409 943 3.19e-25 113
MS.gene54060.t1 AT1G63440 24.696 575 343 19 101 647 412 924 2.09e-24 110
MS.gene54060.t1 AT1G27770 24.514 514 304 17 36 474 138 642 1.74e-23 107
MS.gene54060.t1 AT5G21930 22.359 568 321 15 153 674 354 847 6.01e-21 99.4
MS.gene54060.t1 AT5G21930 22.359 568 321 15 153 674 354 847 6.01e-21 99.4
MS.gene54060.t1 AT4G33520 23.411 598 374 14 95 664 344 885 1.18e-18 92.0
MS.gene54060.t1 AT4G33520 23.077 598 371 14 95 667 344 877 1.86e-18 91.7
MS.gene54060.t1 AT5G53010 22.945 584 378 16 135 656 285 858 5.71e-18 90.1
MS.gene54060.t1 AT2G19110 22.768 672 385 25 63 685 112 698 1.54e-17 88.6
MS.gene54060.t1 AT2G19110 22.768 672 385 25 63 685 112 698 1.54e-17 88.6
MS.gene54060.t1 AT2G19110 22.768 672 385 25 63 685 112 698 1.54e-17 88.6
MS.gene54060.t1 AT5G21930 22.046 567 301 16 153 674 354 824 2.54e-17 87.8
MS.gene54060.t1 AT4G30110 29.048 210 113 6 481 685 511 689 5.56e-12 70.5
MS.gene54060.t1 AT4G30110 22.517 302 207 7 60 337 99 397 7.28e-11 67.0
MS.gene54060.t1 AT4G30110 29.048 210 113 6 481 685 511 689 5.56e-12 70.5
MS.gene54060.t1 AT4G30110 22.517 302 207 7 60 337 99 397 7.28e-11 67.0

Find 213 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCATTCTCTGGAAAA+TGG 0.193751 1.2:+10419665 None:intergenic
TTGGGAATTTGCAAGAATTA+AGG 0.200200 1.2:-10418555 MS.gene54060:CDS
TAATACTAATTATTCAATTT+AGG 0.204457 1.2:-10417719 None:intergenic
AAAGGCATGGAACAATATTT+TGG 0.205191 1.2:-10418432 MS.gene54060:CDS
ATCTTTAGGTGTTGCTTATC+AGG 0.208621 1.2:-10420772 MS.gene54060:intron
AAGACTATGGTAGAGAAAAT+AGG 0.209329 1.2:-10418149 MS.gene54060:CDS
GCAAAGAGAATGTGAGAAAA+AGG 0.235951 1.2:-10420836 MS.gene54060:CDS
TGCAATTTCAGCACGTTTCC+TGG 0.243474 1.2:+10418014 None:intergenic
ATATTGATTCTGATGGAAAT+TGG 0.252576 1.2:-10421085 MS.gene54060:CDS
GCCAGCAGGCTTCAAGTCTT+TGG 0.258723 1.2:-10423488 MS.gene54060:CDS
TATGGAAGCTGCTGCTATTA+TGG 0.264670 1.2:-10423387 MS.gene54060:CDS
AAACTCATATTTACCTGTTC+AGG 0.268472 1.2:+10421041 None:intergenic
GGCTTATTATACTGACTTGC+AGG 0.287291 1.2:+10418901 None:intergenic
TTCTGGCTGCAAGAGCTTCT+AGG 0.288571 1.2:-10421524 MS.gene54060:CDS
TCCTTTAGTTTCCAGCTATC+AGG 0.290212 1.2:+10419169 None:intergenic
TGCTATTATGGCCATTGCTT+TGG 0.300734 1.2:-10423375 MS.gene54060:CDS
TGATCAAACACTTCTTCTAT+TGG 0.302442 1.2:+10423551 None:intergenic
TTGTCTGTCACTATGGCTAT+TGG 0.302650 1.2:-10421726 MS.gene54060:CDS
TCATGTTAATTGCTTTGATT+TGG 0.303447 1.2:-10419395 MS.gene54060:CDS
CAACAAGTGCTTACAGCAAT+TGG 0.309658 1.2:-10421894 MS.gene54060:CDS
CCAACAAAGTCTTGCCAATC+AGG 0.312238 1.2:+10423332 None:intergenic
GAGCGTGGACTTCGATCTTT+AGG 0.314591 1.2:-10420786 MS.gene54060:CDS
ATCCTTTGATATTGTCATAA+TGG 0.314820 1.2:+10419213 None:intergenic
CGGTATAATTCTTCATTCTC+TGG 0.315093 1.2:+10419658 None:intergenic
GAACCCTTTGTCATGGGTTA+TGG 0.321224 1.2:-10423405 MS.gene54060:CDS
GAGAGCGGCGGCAGCGTTGC+CGG 0.322487 1.2:+10423253 None:intergenic
GGGGCTGGGCCGGCGTCATC+TGG 0.327400 1.2:-10418523 MS.gene54060:CDS
ATGGACGTGTTTCAGGCTTA+TGG 0.330881 1.2:-10417809 MS.gene54060:intron
TGGGAATTTGCAAGAATTAA+GGG 0.332614 1.2:-10418554 MS.gene54060:CDS
AGACTATGGTAGAGAAAATA+GGG 0.334023 1.2:-10418148 MS.gene54060:CDS
CGATACAACACCGCAAGTAT+AGG 0.338566 1.2:-10421812 MS.gene54060:CDS
GGATGGAATCGACAATCTTT+TGG 0.341364 1.2:-10421790 MS.gene54060:CDS
AGCTTCTAGGGTTGAAAATC+AGG 0.341699 1.2:-10421511 MS.gene54060:CDS
CAACGCTGCCGCCGCTCTCA+TGG 0.342252 1.2:-10423249 MS.gene54060:CDS
CCTGATTGGCAAGACTTTGT+TGG 0.357454 1.2:-10423332 MS.gene54060:CDS
TAAGGACTTTGTGATACTTC+TGG 0.360420 1.2:-10421541 MS.gene54060:CDS
TTTGACATGCTTACCTCTAC+TGG 0.361665 1.2:+10421450 None:intergenic
TTTCGGAAAAGCAGCTCATT+TGG 0.368646 1.2:-10421946 MS.gene54060:CDS
ATGGCCATTGCTTTGGCTAA+TGG 0.376812 1.2:-10423368 MS.gene54060:CDS
GTCGATCAGTCTGCTTTAAC+AGG 0.378091 1.2:-10422077 MS.gene54060:CDS
CGTCATCTGGTTGTACAGTT+TGG 0.388806 1.2:-10418510 MS.gene54060:CDS
TAGCAAAGGGGCTCCTGAAC+AGG 0.389015 1.2:-10421054 MS.gene54060:intron
GCGCTAAAGAAAGCAGATAT+TGG 0.391615 1.2:-10419792 MS.gene54060:CDS
GGGCTCATGCAGTGATTGAT+AGG 0.394919 1.2:-10420815 MS.gene54060:CDS
GAGAAGGCTGATGGATTTGC+CGG 0.395301 1.2:-10420154 MS.gene54060:CDS
GATACAACACCGCAAGTATA+GGG 0.400508 1.2:-10421811 MS.gene54060:CDS
TCGAGTAGACGCGCATCAGC+TGG 0.407094 1.2:+10422116 None:intergenic
CTGCTCTGCTTGGTCAAGAC+AGG 0.411071 1.2:-10420216 MS.gene54060:CDS
GCTATAGATACTGCAATTGT+TGG 0.412503 1.2:-10421486 MS.gene54060:CDS
AGTCTTTGGACCAAACAAAC+TGG 0.413241 1.2:-10423474 MS.gene54060:CDS
CAGAGATTGCAGAGCAAGCC+AGG 0.413936 1.2:-10418032 MS.gene54060:CDS
TTCACATCAAAGAAAGACTA+TGG 0.414821 1.2:-10418162 MS.gene54060:CDS
GTTCTCTGCAGTGATAAAAC+TGG 0.415885 1.2:-10421630 MS.gene54060:CDS
CATAGCAGTGTATGCAGATT+GGG 0.419398 1.2:-10418573 MS.gene54060:CDS
CTGGCCATTGGTAAAGAAAC+AGG 0.420847 1.2:-10420277 MS.gene54060:CDS
TGCATTTGTTCAATTGCTGT+TGG 0.426986 1.2:-10421864 MS.gene54060:CDS
AGAAAATAGGGAAGCACAAT+GGG 0.431599 1.2:-10418136 MS.gene54060:CDS
TAAGGGAATGGGATGGGGCT+GGG 0.435110 1.2:-10418537 MS.gene54060:CDS
TCTGGCTGCAAGAGCTTCTA+GGG 0.437552 1.2:-10421523 MS.gene54060:CDS
CTTAGCCTTGGGAGCTAAAC+CGG 0.442178 1.2:+10423226 None:intergenic
TATTGTGCTTGGCAGTTACA+TGG 0.442593 1.2:-10419131 MS.gene54060:CDS
GACATAATCAGCATTAAGTT+AGG 0.442854 1.2:-10422149 MS.gene54060:CDS
GTGAATGTCAAGATGATTAC+TGG 0.444307 1.2:-10420535 MS.gene54060:intron
CGAGGACAAAAGCGCCTAGT+AGG 0.446754 1.2:+10418817 None:intergenic
AATGACGGCTATTGAGGAAA+TGG 0.448881 1.2:-10421664 MS.gene54060:CDS
TTCTCAATCAACTCATCAAT+AGG 0.451090 1.2:+10420172 None:intergenic
GGAATGGGATGGGGCTGGGC+CGG 0.454115 1.2:-10418533 MS.gene54060:CDS
GCTGCCGCCGCTCTCATGGC+CGG 0.460591 1.2:-10423245 MS.gene54060:CDS
CGGTTTAGCTCCCAAGGCTA+AGG 0.460678 1.2:-10423225 MS.gene54060:intron
GGTGCACCATGGCAATTTGT+TGG 0.461498 1.2:-10420628 MS.gene54060:CDS
ATATCTGCTTTCTTTAGCGC+CGG 0.462398 1.2:+10419795 None:intergenic
TCATAGCAGTGTATGCAGAT+TGG 0.462541 1.2:-10418574 MS.gene54060:CDS
AACATGTTGCAGGACAAGTT+TGG 0.466458 1.2:-10418972 MS.gene54060:intron
ATTAAAAGAGCTCTTGAACT+TGG 0.466734 1.2:-10420559 MS.gene54060:CDS
AAAGAAACAGGTAGAAGGCT+TGG 0.468039 1.2:-10420265 MS.gene54060:CDS
TCTACCTGTTTCTTTACCAA+TGG 0.468197 1.2:+10420273 None:intergenic
CAGTAAATCAAGAGGGATGT+AGG 0.471473 1.2:+10418484 None:intergenic
TTATGTGGAACCCTTTGTCA+TGG 0.472328 1.2:-10423412 MS.gene54060:CDS
ATTTCCATCAGAATCAATAT+AGG 0.476162 1.2:+10421088 None:intergenic
CTATGGCTATTGGTTCTCAT+AGG 0.476273 1.2:-10421716 MS.gene54060:CDS
CTTACCTATATTGATTCTGA+TGG 0.478930 1.2:-10421092 MS.gene54060:CDS
CTATACTTGCGGTGTTGTAT+CGG 0.479424 1.2:+10421813 None:intergenic
CAGCTATCAGGTAGTGGAGA+TGG 0.479748 1.2:+10419181 None:intergenic
TTAAGGGAATGGGATGGGGC+TGG 0.479967 1.2:-10418538 MS.gene54060:CDS
ACTATACTCATTGAAAGTGT+TGG 0.480386 1.2:+10418071 None:intergenic
TTTGCAAGAATTAAGGGAAT+GGG 0.483595 1.2:-10418548 MS.gene54060:CDS
AAAACAGTTGGCATTGCAAT+GGG 0.483723 1.2:+10421747 None:intergenic
TCCAAAGACTTGAAGCCTGC+TGG 0.484333 1.2:+10423487 None:intergenic
AAACAAACTGGAAGAGAAAA+CGG 0.485201 1.2:-10423462 MS.gene54060:CDS
AAGAATTAAGGGAATGGGAT+GGG 0.485813 1.2:-10418543 MS.gene54060:CDS
AAGCATATTTGTGGAATGAC+TGG 0.488465 1.2:-10419837 MS.gene54060:CDS
AGAATTAAGGGAATGGGATG+GGG 0.489314 1.2:-10418542 MS.gene54060:CDS
ATGCTTACCTCTACTGGATC+AGG 0.491141 1.2:+10421456 None:intergenic
TTGTAACTAGGTCTCGCAAT+TGG 0.492293 1.2:-10418866 MS.gene54060:CDS
CTTGTTGAAAGTGTCCAACT+TGG 0.493986 1.2:+10421910 None:intergenic
TATCCATCATCTGCTCTGCT+TGG 0.494882 1.2:-10420226 MS.gene54060:CDS
TATCTGCTTTCTTTAGCGCC+GGG 0.496329 1.2:+10419796 None:intergenic
TTCAGGATCAACTGTCAAGA+AGG 0.499209 1.2:-10422012 MS.gene54060:CDS
CTCTTGTCTACAGGATTGAA+TGG 0.500782 1.2:+10421122 None:intergenic
CAAGAGAGGAAGCATATTTG+TGG 0.501941 1.2:-10419846 MS.gene54060:CDS
CTAAAGGAAATATTTGCTAC+TGG 0.502026 1.2:-10419154 MS.gene54060:CDS
GATATTGTCCTCACTGAACC+TGG 0.504323 1.2:-10419726 MS.gene54060:CDS
AGGTACTAAGAGATGGCAAA+TGG 0.504751 1.2:-10422205 MS.gene54060:CDS
TATGTGGAACCCTTTGTCAT+GGG 0.507173 1.2:-10423411 MS.gene54060:CDS
ATAGTCTTTCTTTGATGTGA+AGG 0.509470 1.2:+10418164 None:intergenic
TTTGCTACTGGTATTGTGCT+TGG 0.513287 1.2:-10419142 MS.gene54060:CDS
GAAGCAATTGTGTATGCAAC+CGG 0.513427 1.2:-10421981 MS.gene54060:CDS
ATCATTGCAATACTGAATGA+TGG 0.514220 1.2:-10419342 MS.gene54060:intron
CATCTCCACTACCTGATAGC+TGG 0.516103 1.2:-10419180 MS.gene54060:CDS
TTCATTGAAGAAAACAATGC+CGG 0.523429 1.2:-10423272 MS.gene54060:CDS
AGCTGATGCGCGTCTACTCG+AGG 0.524137 1.2:-10422114 MS.gene54060:CDS
AGTTTCCAGCTATCAGGTAG+TGG 0.525324 1.2:+10419175 None:intergenic
CAACAAAGTCTTGCCAATCA+GGG 0.525327 1.2:+10423333 None:intergenic
ACAAATTGCCATGGTGCACC+AGG 0.526544 1.2:+10420631 None:intergenic
TCTCTGGAAAATGGACCTGC+TGG 0.529726 1.2:+10419674 None:intergenic
AACAGGTAGAAGGCTTGGAA+TGG 0.529929 1.2:-10420260 MS.gene54060:CDS
AGAGCAGTCCTCTTGTCTAC+AGG 0.530089 1.2:+10421113 None:intergenic
AACAAAGTCTTGCCAATCAG+GGG 0.530409 1.2:+10423334 None:intergenic
CTAGGGGATCAGCTGGCCAT+TGG 0.534615 1.2:-10420289 MS.gene54060:intron
ATTTGCAAGAATTAAGGGAA+TGG 0.535354 1.2:-10418549 MS.gene54060:CDS
CAAAACAGTTGGCATTGCAA+TGG 0.535697 1.2:+10421746 None:intergenic
CATCAGAGGAAGGAGCCAGC+AGG 0.536863 1.2:-10423502 MS.gene54060:CDS
ACCTGATAGCTGGAAACTAA+AGG 0.537279 1.2:-10419170 MS.gene54060:CDS
GCAATGATCAAAACCATGAA+TGG 0.539325 1.2:+10419357 None:intergenic
ACGGCTATTGAGGAAATGGC+TGG 0.541257 1.2:-10421660 MS.gene54060:CDS
CGATTCCATCCCTATACTTG+CGG 0.547735 1.2:+10421802 None:intergenic
TCAGTGCTGTGCTCACCAGC+AGG 0.547916 1.2:-10419689 MS.gene54060:CDS
ATACTCATTGAAAGTGTTGG+AGG 0.548106 1.2:+10418074 None:intergenic
AGAGCTGCCATCATCTCAGC+AGG 0.548210 1.2:+10418927 None:intergenic
ACAGGTAGAAGGCTTGGAAT+GGG 0.550080 1.2:-10420259 MS.gene54060:CDS
ATTGCTTTGGCTAATGGTGA+TGG 0.551245 1.2:-10423362 MS.gene54060:CDS
AGACCTGGTCTTCTCCTACT+AGG 0.552915 1.2:-10418831 MS.gene54060:CDS
AAATAATCCTGCTGAGATGA+TGG 0.554204 1.2:-10418934 MS.gene54060:CDS
CATGGCCGGTTTAGCTCCCA+AGG 0.556130 1.2:-10423231 MS.gene54060:CDS
TGGTCTTTCACCGATAGACC+TGG 0.558830 1.2:-10418846 MS.gene54060:CDS
AAAATTTAGGTACTAAGAGA+TGG 0.559929 1.2:-10422212 MS.gene54060:intron
CTTCAACACATACCACAATA+CGG 0.562485 1.2:+10419527 None:intergenic
GAGTTGATTGAGAAGGCTGA+TGG 0.562854 1.2:-10420163 MS.gene54060:CDS
TGACCAAGCAGAGCAGATGA+TGG 0.563042 1.2:+10420223 None:intergenic
GTTGACAGTACAAACCAAGT+TGG 0.563269 1.2:-10421924 MS.gene54060:CDS
CTTCCATAACCCATGACAAA+GGG 0.564334 1.2:+10423402 None:intergenic
TAGGAGAAGACCAGGTCTAT+CGG 0.564924 1.2:+10418836 None:intergenic
TGTGTGGCATACTTCGTCAC+AGG 0.566227 1.2:+10422044 None:intergenic
GTCAATCACCATCCGTATTG+TGG 0.566892 1.2:-10419539 MS.gene54060:intron
TTGAAAGTGTTGGAGGTAGG+AGG 0.567613 1.2:+10418081 None:intergenic
TTAATGCTGATTATGTCTCC+TGG 0.568929 1.2:+10422155 None:intergenic
ATTGGCATCGATCTAGCAAA+GGG 0.569114 1.2:-10421067 MS.gene54060:CDS
CTCAAGGTTGATGCTACCCA+TGG 0.569861 1.2:+10424553 None:intergenic
GCGCCTAGTAGGAGAAGACC+AGG 0.569939 1.2:+10418828 None:intergenic
TAGGGAAGCACAATGGGCAT+CGG 0.570019 1.2:-10418130 MS.gene54060:CDS
TTGGTAAAGAAACAGGTAGA+AGG 0.570647 1.2:-10420270 MS.gene54060:CDS
TACCATTATGACAATATCAA+AGG 0.570704 1.2:-10419215 MS.gene54060:CDS
GAGAAAATAGGGAAGCACAA+TGG 0.572813 1.2:-10418137 MS.gene54060:CDS
TGTTGATACAAACTTGATTG+AGG 0.576695 1.2:-10421583 MS.gene54060:CDS
TCTCATAGGCTTTCACAGCA+AGG 0.579252 1.2:-10421702 MS.gene54060:CDS
AATGTTGATCAGGCTAGAGC+TGG 0.582332 1.2:-10421167 MS.gene54060:intron
AGCTAAACCGGCCATGAGAG+CGG 0.582614 1.2:+10423238 None:intergenic
GTTTCAGCGCTATCATGTCT+AGG 0.584777 1.2:+10420583 None:intergenic
TATTGAGGAAATGGCTGGAA+TGG 0.585652 1.2:-10421655 MS.gene54060:CDS
TATGGAGCGGAATACTCTCA+AGG 0.586181 1.2:-10417791 MS.gene54060:CDS
CGAGTAGACGCGCATCAGCT+GGG 0.588089 1.2:+10422117 None:intergenic
ATTGATAGGTTTGCTGAGCG+TGG 0.590319 1.2:-10420801 MS.gene54060:CDS
ACAAATATGAAATTGTCAAG+AGG 0.591059 1.2:-10419872 MS.gene54060:CDS
CTGATAATGACACTGAGACC+AGG 0.595316 1.2:+10419708 None:intergenic
TGCTCTGCTTGGTCAAGACA+GGG 0.595362 1.2:-10420215 MS.gene54060:CDS
CAATGAGTATAGTAGCTATG+AGG 0.596133 1.2:-10418061 MS.gene54060:CDS
CATTCAATCCTGTAGACAAG+AGG 0.598642 1.2:-10421121 MS.gene54060:CDS
TTGTCAAGAGGCTTCAAGAG+AGG 0.598784 1.2:-10419860 MS.gene54060:CDS
CAAGAATTAAGGGAATGGGA+TGG 0.600532 1.2:-10418544 MS.gene54060:CDS
TCAGGATCAACTGTCAAGAA+GGG 0.600634 1.2:-10422011 MS.gene54060:CDS
CAACACCGCAAGTATAGGGA+TGG 0.600845 1.2:-10421807 MS.gene54060:CDS
GAGAGAACAAAAGATAGTCC+TGG 0.603338 1.2:-10420649 MS.gene54060:CDS
CCGCTATATTCTGAGTGGAA+AGG 0.604531 1.2:-10418450 MS.gene54060:CDS
ATATTCTGAGTGGAAAGGCA+TGG 0.605709 1.2:-10418445 MS.gene54060:CDS
AACACATACCACAATACGGA+TGG 0.609762 1.2:+10419531 None:intergenic
CATCTGAAATGTTCAAGACA+AGG 0.609793 1.2:-10423530 MS.gene54060:CDS
TCATTGAAAGTGTTGGAGGT+AGG 0.610208 1.2:+10418078 None:intergenic
AACAAACCAACAAATTGCCA+TGG 0.612887 1.2:+10420622 None:intergenic
AGATGGTGTAAATGACGCCC+CGG 0.613481 1.2:-10419814 MS.gene54060:CDS
AATTGGCATCGATCTAGCAA+AGG 0.613824 1.2:-10421068 MS.gene54060:CDS
CGTGTTTCAGGCTTATGGAG+CGG 0.617033 1.2:-10417804 MS.gene54060:intron
TATTGATGAGTTGATTGAGA+AGG 0.617625 1.2:-10420170 MS.gene54060:CDS
CAAGGTCTGACATCAGAGGA+AGG 0.617637 1.2:-10423512 MS.gene54060:CDS
ATGGAGCGGAATACTCTCAA+GGG 0.622181 1.2:-10417790 MS.gene54060:CDS
GCTGATGCGCGTCTACTCGA+GGG 0.626925 1.2:-10422113 MS.gene54060:CDS
ATCTGCTTTCTTTAGCGCCG+GGG 0.629079 1.2:+10419797 None:intergenic
ATCACCATTAGCCAAAGCAA+TGG 0.630409 1.2:+10423364 None:intergenic
CTTTGGCTAATGGTGATGGA+AGG 0.631244 1.2:-10423358 MS.gene54060:CDS
GGAAACGTGCTGAAATTGCA+AGG 0.631585 1.2:-10418011 MS.gene54060:intron
ATTTGTGGAATGACTGGAGA+TGG 0.633041 1.2:-10419831 MS.gene54060:CDS
ATAGTGACAGACAAAACAGT+TGG 0.633449 1.2:+10421735 None:intergenic
GCTTCCATAACCCATGACAA+AGG 0.635816 1.2:+10423401 None:intergenic
TCCTGAAAACACTTCTTGTG+TGG 0.638349 1.2:+10422028 None:intergenic
TGAGTCAGTAGTGAAGCTGA+AGG 0.641081 1.2:-10417761 MS.gene54060:CDS
GAGTCAGTAGTGAAGCTGAA+GGG 0.642353 1.2:-10417760 MS.gene54060:CDS
AAGACAAGGTCTGACATCAG+AGG 0.647206 1.2:-10423516 MS.gene54060:CDS
TAAACCGGCCATGAGAGCGG+CGG 0.651121 1.2:+10423241 None:intergenic
CCTTTCCACTCAGAATATAG+CGG 0.652207 1.2:+10418450 None:intergenic
TATTAAGTGTGTCAATGTCG+AGG 0.661385 1.2:+10417737 None:intergenic
GGCTAGAGCTGGCATCAATG+AGG 0.661708 1.2:-10421156 MS.gene54060:CDS
GCAATCCGCTATATTCTGAG+TGG 0.662658 1.2:-10418455 MS.gene54060:CDS
AGGTAGGAGGCTGAAGACCA+TGG 0.669591 1.2:+10418094 None:intergenic
TGTCTAGGAGGATCAAACAA+TGG 0.671505 1.2:+10420598 None:intergenic
AAGATAGTCCTGGTGCACCA+TGG 0.672171 1.2:-10420639 MS.gene54060:CDS
ACAAAGTCTTGCCAATCAGG+GGG 0.680472 1.2:+10423335 None:intergenic
AATGCTTCCTGATCCAGTAG+AGG 0.688002 1.2:-10421463 MS.gene54060:intron
TGCAGGACAAGTTTGGTGTG+AGG 0.695299 1.2:-10418965 MS.gene54060:intron
TCAGCGCTATCATGTCTAGG+AGG 0.696196 1.2:+10420586 None:intergenic
TCGGCACAAAGATCACGCCA+TGG 0.698305 1.2:-10418111 MS.gene54060:CDS
TCAGGCTTACCAGCTGAGCG+AGG 0.699552 1.2:+10418799 None:intergenic
CACTGAGACCAGGTTCAGTG+AGG 0.706615 1.2:+10419718 None:intergenic
ACTGTACAACCAGATGACGC+CGG 0.711415 1.2:+10418514 None:intergenic
TTGGCATCGATCTAGCAAAG+GGG 0.759774 1.2:-10421066 MS.gene54060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATAATATTTGATTTGA+TGG + chr1.2:10417887-10417906 None:intergenic 10.0%
!!! CAATTATTATTTTTAATAAG+AGG + chr1.2:10423499-10423518 None:intergenic 10.0%
!! ATATAACCAACTTTAATATT+TGG - chr1.2:10418414-10418433 MS.gene54060:intron 15.0%
!! ATCAATAAAAATAATAGAAG+TGG + chr1.2:10423534-10423553 None:intergenic 15.0%
!! TTCTTAATATAAAGTAGTAA+CGG + chr1.2:10419185-10419204 None:intergenic 15.0%
!!! AATCTTATCATTCTTTTTTT+TGG - chr1.2:10419742-10419761 MS.gene54060:CDS 15.0%
!!! AATGCTAATTATAATTTTGA+AGG - chr1.2:10418604-10418623 MS.gene54060:intron 15.0%
!!! ATGCTAATTATAATTTTGAA+GGG - chr1.2:10418605-10418624 MS.gene54060:intron 15.0%
!!! ATGTTTGTTTGTTTTTTAAT+TGG - chr1.2:10418086-10418105 MS.gene54060:CDS 15.0%
!!! ATTATCACTCTTTTATAAAA+AGG - chr1.2:10418218-10418237 MS.gene54060:intron 15.0%
!!! ATTATTTTTATTGATAGAAG+CGG - chr1.2:10423539-10423558 MS.gene54060:CDS 15.0%
!!! ATTGCAATATAAAATTTTAG+AGG - chr1.2:10421825-10421844 MS.gene54060:CDS 15.0%
!!! CTATAATAAACTTTGATTTA+TGG + chr1.2:10421924-10421943 None:intergenic 15.0%
!!! GAGGTTAAATATTTTTTTAT+TGG + chr1.2:10422352-10422371 None:intergenic 15.0%
!!! TTAACATATTTAAGTTGTTT+TGG - chr1.2:10422270-10422289 MS.gene54060:intron 15.0%
!! AAAAAGCCAAATATTAAAGT+TGG + chr1.2:10418423-10418442 None:intergenic 20.0%
!! ATAAAAGCAGAAATAAAACA+AGG + chr1.2:10421574-10421593 None:intergenic 20.0%
!! ATATTGAAAGGAAAAACTAT+AGG + chr1.2:10423239-10423258 None:intergenic 20.0%
!! ATTTCCAATATTTGAACATA+AGG + chr1.2:10423955-10423974 None:intergenic 20.0%
!! TAAAAGCAGAAATAAAACAA+GGG + chr1.2:10421573-10421592 None:intergenic 20.0%
!! TAAACATGAACAAATTCTTA+TGG + chr1.2:10417820-10417839 None:intergenic 20.0%
!! TTTCTATTGCATAAATTTGA+GGG - chr1.2:10420974-10420993 MS.gene54060:intron 20.0%
!!! AAATGGTTCTAAATTAAAGT+CGG + chr1.2:10421891-10421910 None:intergenic 20.0%
!!! AACAAGTTTTTGAAGTTTTT+GGG - chr1.2:10418834-10418853 MS.gene54060:CDS 20.0%
!!! AATTTATTATTTTGGCAGTT+TGG - chr1.2:10422851-10422870 MS.gene54060:intron 20.0%
!!! TAACATTTGTTCAATTTTTG+TGG - chr1.2:10420029-10420048 MS.gene54060:intron 20.0%
!!! TGTTATGTTATTTCAGATAT+TGG - chr1.2:10421400-10421419 MS.gene54060:intron 20.0%
!!! TTATTTTTAATAAGAGGTTC+AGG + chr1.2:10423493-10423512 None:intergenic 20.0%
!!! TTTATTATAGCTTTGAAGTT+TGG - chr1.2:10421934-10421953 MS.gene54060:CDS 20.0%
!!! TTTTCATTCATGAACAAAAA+CGG + chr1.2:10418314-10418333 None:intergenic 20.0%
!!! TTTTCTAATCACAAAATGTT+TGG - chr1.2:10422688-10422707 MS.gene54060:intron 20.0%
!!! TTTTCTATTGCATAAATTTG+AGG - chr1.2:10420973-10420992 MS.gene54060:intron 20.0%
! AAAATTTAGGTACTAAGAGA+TGG - chr1.2:10420059-10420078 MS.gene54060:intron 25.0%
! AACAAACAACAAAATCAACA+AGG + chr1.2:10418686-10418705 None:intergenic 25.0%
! AATACATAGTTCAATTCCTA+CGG + chr1.2:10421280-10421299 None:intergenic 25.0%
! ACAAATATGAAATTGTCAAG+AGG - chr1.2:10422399-10422418 MS.gene54060:intron 25.0%
! AGAAAAATATGACTGTCATT+AGG + chr1.2:10423167-10423186 None:intergenic 25.0%
! AGTATGACTTTCATATAGTT+TGG + chr1.2:10418049-10418068 None:intergenic 25.0%
! ATATCATACAAAGAGAAAAG+AGG + chr1.2:10422371-10422390 None:intergenic 25.0%
! ATCCTTTGATATTGTCATAA+TGG + chr1.2:10423061-10423080 None:intergenic 25.0%
! ATTTCCATCAGAATCAATAT+AGG + chr1.2:10421186-10421205 None:intergenic 25.0%
! GAAAAATATGACTGTCATTA+GGG + chr1.2:10423166-10423185 None:intergenic 25.0%
! GATTGATTGTAATTATGTGT+CGG + chr1.2:10424354-10424373 None:intergenic 25.0%
! GTTTATGCCTCAAAAAATAT+TGG - chr1.2:10417835-10417854 MS.gene54060:intron 25.0%
! TAATTAGCATTCTCACATAA+AGG + chr1.2:10418595-10418614 None:intergenic 25.0%
! TACCATTATGACAATATCAA+AGG - chr1.2:10423056-10423075 MS.gene54060:intron 25.0%
! TCATGTTAATTGCTTTGATT+TGG - chr1.2:10422876-10422895 MS.gene54060:intron 25.0%
! TGATACGTCAAAAATAAGTT+AGG + chr1.2:10419366-10419385 None:intergenic 25.0%
! TGCAATTACAAAAAGAATGA+CGG - chr1.2:10420592-10420611 MS.gene54060:CDS 25.0%
! TTAATTTACCGAGAAAAAGT+TGG + chr1.2:10423205-10423224 None:intergenic 25.0%
!! AATGACAGTCATATTTTTCT+GGG - chr1.2:10423167-10423186 MS.gene54060:intron 25.0%
!! ACTGATTCATTGTTAATGAA+TGG - chr1.2:10424443-10424462 MS.gene54060:intron 25.0%
!! CAATTTTCAGTAAATCAAGA+GGG + chr1.2:10423797-10423816 None:intergenic 25.0%
!! TAATGACAGTCATATTTTTC+TGG - chr1.2:10423166-10423185 MS.gene54060:intron 25.0%
!! TATTGTATGATTTGTGTAAC+AGG - chr1.2:10421591-10421610 MS.gene54060:CDS 25.0%
!! TTTTATTGGACTTCATTAAG+AGG + chr1.2:10422338-10422357 None:intergenic 25.0%
!!! AACATGACCAATATTTTTTG+AGG + chr1.2:10417845-10417864 None:intergenic 25.0%
!!! AATAATAGCAAGAGTATTAG+CGG + chr1.2:10423593-10423612 None:intergenic 25.0%
!!! AATATTTTGGAAAACAAGGT+AGG - chr1.2:10423852-10423871 MS.gene54060:intron 25.0%
!!! ATATTGATTCTGATGGAAAT+TGG - chr1.2:10421186-10421205 MS.gene54060:intron 25.0%
!!! CTCTTAGTACCTAAATTTTT+TGG + chr1.2:10420058-10420077 None:intergenic 25.0%
!!! CTTATCATTCTTTTTTTTGG+TGG - chr1.2:10419745-10419764 MS.gene54060:CDS 25.0%
!!! GAACAAGTTTTTGAAGTTTT+TGG - chr1.2:10418833-10418852 MS.gene54060:CDS 25.0%
!!! GAACAATATTTTGGAAAACA+AGG - chr1.2:10423848-10423867 MS.gene54060:intron 25.0%
!!! GTTTGTTTTTTAATTGGTAG+TGG - chr1.2:10418092-10418111 MS.gene54060:CDS 25.0%
!!! TGATTTTGTTGTTTGTTACT+AGG - chr1.2:10418689-10418708 MS.gene54060:intron 25.0%
!!! TTAGTACCTAAATTTTTTGG+TGG + chr1.2:10420055-10420074 None:intergenic 25.0%
AAAAAAAACAGAGAGAGAGA+TGG + chr1.2:10417791-10417810 None:intergenic 30.0%
AAAAAAAATGCAAGTACACG+AGG + chr1.2:10424045-10424064 None:intergenic 30.0%
AAACAAACTGGAAGAGAAAA+CGG - chr1.2:10418809-10418828 MS.gene54060:CDS 30.0%
AAACTCATATTTACCTGTTC+AGG + chr1.2:10421233-10421252 None:intergenic 30.0%
AAGACTATGGTAGAGAAAAT+AGG - chr1.2:10424122-10424141 MS.gene54060:intron 30.0%
AAGATTGAATTAGATACGCA+TGG + chr1.2:10422646-10422665 None:intergenic 30.0%
AAGTCATACTAAGAACTCTT+AGG - chr1.2:10418059-10418078 MS.gene54060:CDS 30.0%
ACATAATTCATTACTCTTCG+AGG + chr1.2:10424290-10424309 None:intergenic 30.0%
AGACTATGGTAGAGAAAATA+GGG - chr1.2:10424123-10424142 MS.gene54060:intron 30.0%
AGTCATACTAAGAACTCTTA+GGG - chr1.2:10418060-10418079 MS.gene54060:CDS 30.0%
ATAGTCTTTCTTTGATGTGA+AGG + chr1.2:10424110-10424129 None:intergenic 30.0%
ATCATTGCAATACTGAATGA+TGG - chr1.2:10422929-10422948 MS.gene54060:intron 30.0%
ATTAAAAGAGCTCTTGAACT+TGG - chr1.2:10421712-10421731 MS.gene54060:CDS 30.0%
ATTTACTCAGTCTCTTTCTT+TGG - chr1.2:10421040-10421059 MS.gene54060:intron 30.0%
ATTTCGTCACATTGTTGATA+AGG - chr1.2:10423897-10423916 MS.gene54060:intron 30.0%
ATTTGCAAGAATTAAGGGAA+TGG - chr1.2:10423722-10423741 MS.gene54060:intron 30.0%
CAAAGAGAATGTGAGAAAAA+GGG - chr1.2:10421436-10421455 MS.gene54060:intron 30.0%
CAATTTGACAATCAAAACTC+CGG + chr1.2:10422187-10422206 None:intergenic 30.0%
CAGAGAATCTATCTAAATGA+TGG + chr1.2:10422212-10422231 None:intergenic 30.0%
CTTTCATATAGTTTGGTCAT+CGG + chr1.2:10418042-10418061 None:intergenic 30.0%
GAATTGAACTATGTATTCCA+AGG - chr1.2:10421283-10421302 MS.gene54060:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr1.2:10419793-10419812 None:intergenic 30.0%
GACATAATCAGCATTAAGTT+AGG - chr1.2:10420122-10420141 MS.gene54060:intron 30.0%
GTTACCATAACAGAAAGATT+AGG + chr1.2:10423642-10423661 None:intergenic 30.0%
TAATGGTACCTACATGTATA+TGG + chr1.2:10423044-10423063 None:intergenic 30.0%
TAGTTACAAAAATTAGCGCT+TGG + chr1.2:10423394-10423413 None:intergenic 30.0%
TCGAAGAGTAATGAATTATG+TGG - chr1.2:10424289-10424308 MS.gene54060:intron 30.0%
TGATCAAACACTTCTTCTAT+TGG + chr1.2:10418723-10418742 None:intergenic 30.0%
TGGGAATTTGCAAGAATTAA+GGG - chr1.2:10423717-10423736 MS.gene54060:intron 30.0%
TGTTGATACAAACTTGATTG+AGG - chr1.2:10420688-10420707 MS.gene54060:intron 30.0%
TTCACATCAAAGAAAGACTA+TGG - chr1.2:10424109-10424128 MS.gene54060:intron 30.0%
TTCATTGAAGAAAACAATGC+CGG - chr1.2:10418999-10419018 MS.gene54060:intron 30.0%
TTCTCAATCAACTCATCAAT+AGG + chr1.2:10422102-10422121 None:intergenic 30.0%
TTGAAGTTTGGAAATAATCG+TGG - chr1.2:10421946-10421965 MS.gene54060:CDS 30.0%
TTGGGAATTTGCAAGAATTA+AGG - chr1.2:10423716-10423735 MS.gene54060:intron 30.0%
TTTATGGTATGAGCTACAAA+TGG + chr1.2:10421908-10421927 None:intergenic 30.0%
TTTCAATATCATCACCAACT+AGG - chr1.2:10423250-10423269 MS.gene54060:CDS 30.0%
TTTGCAAGAATTAAGGGAAT+GGG - chr1.2:10423723-10423742 MS.gene54060:intron 30.0%
! AAATTTTCAAACCTTAGCCT+TGG + chr1.2:10419060-10419079 None:intergenic 30.0%
! AAGCGCTAATTTTTGTAACT+AGG - chr1.2:10423393-10423412 MS.gene54060:CDS 30.0%
! ACTATACTCATTGAAAGTGT+TGG + chr1.2:10424203-10424222 None:intergenic 30.0%
! ATTCTTCATTCTCTGGAAAA+TGG + chr1.2:10422609-10422628 None:intergenic 30.0%
! CTAAAGGAAATATTTGCTAC+TGG - chr1.2:10423117-10423136 MS.gene54060:intron 30.0%
! GCAATTTTCAGTAAATCAAG+AGG + chr1.2:10423798-10423817 None:intergenic 30.0%
! GTTTAAAGCTAATAGTGCTT+AGG + chr1.2:10423282-10423301 None:intergenic 30.0%
! GTTTTCTTCAATGAAACTGA+TGG + chr1.2:10418994-10419013 None:intergenic 30.0%
! TATGCAGTGTTGTTAAACAA+CGG - chr1.2:10419446-10419465 MS.gene54060:intron 30.0%
! TATGTGTTTTCTTTATCCGT+AGG - chr1.2:10421261-10421280 MS.gene54060:intron 30.0%
! TTGAATTTGGAATGTTGATC+AGG - chr1.2:10421094-10421113 MS.gene54060:CDS 30.0%
!! AAAGGCATGGAACAATATTT+TGG - chr1.2:10423839-10423858 MS.gene54060:intron 30.0%
!! AATTTTCAAACCTTAGCCTT+GGG + chr1.2:10419059-10419078 None:intergenic 30.0%
!! ATTAGCTTTAAACATGTTGC+AGG - chr1.2:10423289-10423308 MS.gene54060:CDS 30.0%
!! ATTTGATTTTGCACCATTCA+TGG - chr1.2:10422901-10422920 MS.gene54060:intron 30.0%
!! CTTACCTATATTGATTCTGA+TGG - chr1.2:10421179-10421198 MS.gene54060:intron 30.0%
!! TAGTTGGTGATGATATTGAA+AGG + chr1.2:10423251-10423270 None:intergenic 30.0%
!! TATTGATGAGTTGATTGAGA+AGG - chr1.2:10422101-10422120 MS.gene54060:CDS 30.0%
!! TTGTTGTTTGTTACTAGGAA+CGG - chr1.2:10418694-10418713 MS.gene54060:intron 30.0%
!!! AGTTTGTTTTGTAACTTGAC+AGG - chr1.2:10423665-10423684 MS.gene54060:intron 30.0%
!!! ATCATTCTTTTTTTTGGTGG+TGG - chr1.2:10419748-10419767 MS.gene54060:CDS 30.0%
!!! TGAAGTTTTTGGGTTTTATG+TGG - chr1.2:10418844-10418863 MS.gene54060:CDS 30.0%
!!! TTTTAATTGGTAGTGGTAAC+AGG - chr1.2:10418099-10418118 MS.gene54060:CDS 30.0%
AAAAAGAATGACGGCTATTG+AGG - chr1.2:10420601-10420620 MS.gene54060:CDS 35.0%
AAAACAGTTGGCATTGCAAT+GGG + chr1.2:10420527-10420546 None:intergenic 35.0%
AAATAACCTATCTGTTTGCG+GGG - chr1.2:10423971-10423990 MS.gene54060:intron 35.0%
AAATAATCCTGCTGAGATGA+TGG - chr1.2:10423337-10423356 MS.gene54060:CDS 35.0%
AACAAACCAACAAATTGCCA+TGG + chr1.2:10421652-10421671 None:intergenic 35.0%
AACCCAAATCAACATCAACA+AGG + chr1.2:10422160-10422179 None:intergenic 35.0%
AAGAATTAAGGGAATGGGAT+GGG - chr1.2:10423728-10423747 MS.gene54060:intron 35.0%
AAGCATATTTGTGGAATGAC+TGG - chr1.2:10422434-10422453 MS.gene54060:intron 35.0%
AATAAATGCCGTATTCTAGC+CGG - chr1.2:10418543-10418562 MS.gene54060:CDS 35.0%
ACAGAGCTTATATACGCAAA+TGG + chr1.2:10419339-10419358 None:intergenic 35.0%
AGCATTTCGATCCTCAAAAT+CGG + chr1.2:10421019-10421038 None:intergenic 35.0%
ATAGTGACAGACAAAACAGT+TGG + chr1.2:10420539-10420558 None:intergenic 35.0%
ATGTTGTCAATTGTGAATCG+CGG + chr1.2:10419612-10419631 None:intergenic 35.0%
ATTGTGGTATGTGTTGAAGT+CGG - chr1.2:10422748-10422767 MS.gene54060:intron 35.0%
CAATGAGTATAGTAGCTATG+AGG - chr1.2:10424210-10424229 MS.gene54060:intron 35.0%
CACTCCTAATCTTTCTGTTA+TGG - chr1.2:10423635-10423654 MS.gene54060:intron 35.0%
CATAATATATGCAAGGTCTG+AGG + chr1.2:10419786-10419805 None:intergenic 35.0%
CATTCTCACATAAAGGACTA+TGG + chr1.2:10418588-10418607 None:intergenic 35.0%
CGGTATAATTCTTCATTCTC+TGG + chr1.2:10422616-10422635 None:intergenic 35.0%
CTCGCCTTATGTTCAAATAT+TGG - chr1.2:10423948-10423967 MS.gene54060:intron 35.0%
CTTCAACACATACCACAATA+CGG + chr1.2:10422747-10422766 None:intergenic 35.0%
GAAAAACGAGGATGTCAATT+TGG - chr1.2:10417746-10417765 MS.gene54060:CDS 35.0%
GAAATAACCTATCTGTTTGC+GGG - chr1.2:10423970-10423989 MS.gene54060:intron 35.0%
GCAAAGAGAATGTGAGAAAA+AGG - chr1.2:10421435-10421454 MS.gene54060:intron 35.0%
GCAATGATCAAAACCATGAA+TGG + chr1.2:10422917-10422936 None:intergenic 35.0%
GCTATAGATACTGCAATTGT+TGG - chr1.2:10420785-10420804 MS.gene54060:CDS 35.0%
GGAAATAACCTATCTGTTTG+CGG - chr1.2:10423969-10423988 MS.gene54060:intron 35.0%
GTGAATGTCAAGATGATTAC+TGG - chr1.2:10421736-10421755 MS.gene54060:CDS 35.0%
TAACACTGCCATATACATGT+AGG - chr1.2:10423033-10423052 MS.gene54060:intron 35.0%
TAAGGACTTTGTGATACTTC+TGG - chr1.2:10420730-10420749 MS.gene54060:intron 35.0%
TACATGTATATGGCAGTGTT+AGG + chr1.2:10423034-10423053 None:intergenic 35.0%
TAGATACGCATGGAAACTTA+CGG + chr1.2:10422636-10422655 None:intergenic 35.0%
TATTAAGTGTGTCAATGTCG+AGG + chr1.2:10424537-10424556 None:intergenic 35.0%
TGCATTTGTTCAATTGCTGT+TGG - chr1.2:10420407-10420426 MS.gene54060:intron 35.0%
TTAATGAATGGACGTGTTTC+AGG - chr1.2:10424455-10424474 MS.gene54060:intron 35.0%
TTGTGGCCACCAAAAAATTT+AGG - chr1.2:10420046-10420065 MS.gene54060:intron 35.0%
! AAAGTGTGTCTAAGAAGTGT+CGG + chr1.2:10422299-10422318 None:intergenic 35.0%
! AACTGTTTTGTCTGTCACTA+TGG - chr1.2:10420538-10420557 MS.gene54060:CDS 35.0%
! AGAAAATAGGGAAGCACAAT+GGG - chr1.2:10424135-10424154 MS.gene54060:intron 35.0%
! AGTGGTAACAGGAGATTTTA+GGG - chr1.2:10418110-10418129 MS.gene54060:CDS 35.0%
! ATGCAGTGTTGTTAAACAAC+GGG - chr1.2:10419447-10419466 MS.gene54060:intron 35.0%
! CATCTGAAATGTTCAAGACA+AGG - chr1.2:10418741-10418760 MS.gene54060:intron 35.0%
! TAGTGGTAACAGGAGATTTT+AGG - chr1.2:10418109-10418128 MS.gene54060:CDS 35.0%
! TCCATGACGCAGAATTTTAT+GGG + chr1.2:10419521-10419540 None:intergenic 35.0%
! TGTCCTTGTTGATGTTGATT+TGG - chr1.2:10422154-10422173 MS.gene54060:CDS 35.0%
! TTAATGCTGATTATGTCTCC+TGG + chr1.2:10420119-10420138 None:intergenic 35.0%
! TTCCATGACGCAGAATTTTA+TGG + chr1.2:10419522-10419541 None:intergenic 35.0%
! TTGTAATTATGTGTCGGTGT+AGG + chr1.2:10424348-10424367 None:intergenic 35.0%
!! AAGAGTATTAGCGGAAAGAA+TGG + chr1.2:10423584-10423603 None:intergenic 35.0%
!! ACTTGATTGAGGTGTTTTCT+AGG - chr1.2:10420699-10420718 MS.gene54060:intron 35.0%
!! ATACTCATTGAAAGTGTTGG+AGG + chr1.2:10424200-10424219 None:intergenic 35.0%
!! ATCTTTAGGTGTTGCTTATC+AGG - chr1.2:10421499-10421518 MS.gene54060:CDS 35.0%
!! CTCTTGCTATTATTTCTGCA+AGG - chr1.2:10423599-10423618 MS.gene54060:intron 35.0%
!! CTTGATTGAGGTGTTTTCTA+GGG - chr1.2:10420700-10420719 MS.gene54060:intron 35.0%
!! GCGTCATGGAATTTTAATAG+TGG - chr1.2:10419531-10419550 MS.gene54060:intron 35.0%
!! GTCCTTGTTGATGTTGATTT+GGG - chr1.2:10422155-10422174 MS.gene54060:CDS 35.0%
!! GTGGATTCTGTTTTTCTCTA+GGG - chr1.2:10421965-10421984 MS.gene54060:CDS 35.0%
!! GTTTTCTCTTCCAGTTTGTT+TGG + chr1.2:10418810-10418829 None:intergenic 35.0%
!! TGGATTCTGTTTTTCTCTAG+GGG - chr1.2:10421966-10421985 MS.gene54060:CDS 35.0%
!! TGGTTCTAAATTAAAGTCGG+TGG + chr1.2:10421888-10421907 None:intergenic 35.0%
!! TTGATTGAGGTGTTTTCTAG+GGG - chr1.2:10420701-10420720 MS.gene54060:intron 35.0%
!!! AATCTTTTGGTGCTCTTGAT+TGG - chr1.2:10420494-10420513 MS.gene54060:intron 35.0%
!!! GTTGATGTTGATTTGGGTTT+TGG - chr1.2:10422161-10422180 MS.gene54060:CDS 35.0%
!!! TGATTGTCGACGTTGATTTT+TGG + chr1.2:10422241-10422260 None:intergenic 35.0%
AACAAAGTCTTGCCAATCAG+GGG + chr1.2:10418940-10418959 None:intergenic 40.0%
AACACATACCACAATACGGA+TGG + chr1.2:10422743-10422762 None:intergenic 40.0%
AACATCAACAAGGACATACC+TGG + chr1.2:10422150-10422169 None:intergenic 40.0%
AACATGTTGCAGGACAAGTT+TGG - chr1.2:10423299-10423318 MS.gene54060:CDS 40.0%
AAGAAACAAAACGTGCGTGA+CGG + chr1.2:10418013-10418032 None:intergenic 40.0%
AATGACGGCTATTGAGGAAA+TGG - chr1.2:10420607-10420626 MS.gene54060:CDS 40.0%
ACAACCTTACAGTTGCACAA+AGG + chr1.2:10423928-10423947 None:intergenic 40.0%
ACCTGATAGCTGGAAACTAA+AGG - chr1.2:10423101-10423120 MS.gene54060:intron 40.0%
AGAATTAAGGGAATGGGATG+GGG - chr1.2:10423729-10423748 MS.gene54060:intron 40.0%
AGGTACTAAGAGATGGCAAA+TGG - chr1.2:10420066-10420085 MS.gene54060:intron 40.0%
AGGTCTCCACAAACGTAATT+CGG - chr1.2:10421845-10421864 MS.gene54060:CDS 40.0%
AGTCTTTGGACCAAACAAAC+TGG - chr1.2:10418797-10418816 MS.gene54060:intron 40.0%
ATATCTGCTTTCTTTAGCGC+CGG + chr1.2:10422479-10422498 None:intergenic 40.0%
ATATTCTGAGTGGAAAGGCA+TGG - chr1.2:10423826-10423845 MS.gene54060:intron 40.0%
ATCACCATTAGCCAAAGCAA+TGG + chr1.2:10418910-10418929 None:intergenic 40.0%
ATTGCTTTGGCTAATGGTGA+TGG - chr1.2:10418909-10418928 MS.gene54060:CDS 40.0%
ATTTCGATCCTCAAAATCGG+AGG + chr1.2:10421016-10421035 None:intergenic 40.0%
ATTTGTGGAATGACTGGAGA+TGG - chr1.2:10422440-10422459 MS.gene54060:intron 40.0%
CAAAACAGTTGGCATTGCAA+TGG + chr1.2:10420528-10420547 None:intergenic 40.0%
CAACAAAGTCTTGCCAATCA+GGG + chr1.2:10418941-10418960 None:intergenic 40.0%
CAACAAGTGCTTACAGCAAT+TGG - chr1.2:10420377-10420396 MS.gene54060:intron 40.0%
CAAGAATTAAGGGAATGGGA+TGG - chr1.2:10423727-10423746 MS.gene54060:intron 40.0%
CAGTAAATCAAGAGGGATGT+AGG + chr1.2:10423790-10423809 None:intergenic 40.0%
CATAGCAGTGTATGCAGATT+GGG - chr1.2:10423698-10423717 MS.gene54060:intron 40.0%
CATTCAATCCTGTAGACAAG+AGG - chr1.2:10421150-10421169 MS.gene54060:CDS 40.0%
CCTTTCCACTCAGAATATAG+CGG + chr1.2:10423824-10423843 None:intergenic 40.0%
CTCTTGTCTACAGGATTGAA+TGG + chr1.2:10421152-10421171 None:intergenic 40.0%
CTTCCATAACCCATGACAAA+GGG + chr1.2:10418872-10418891 None:intergenic 40.0%
GAAGCAATTGTGTATGCAAC+CGG - chr1.2:10420290-10420309 MS.gene54060:intron 40.0%
GACACTTCTTAGACACACTT+TGG - chr1.2:10422298-10422317 MS.gene54060:intron 40.0%
GAGAGAACAAAAGATAGTCC+TGG - chr1.2:10421622-10421641 MS.gene54060:CDS 40.0%
GATACAACACCGCAAGTATA+GGG - chr1.2:10420460-10420479 MS.gene54060:intron 40.0%
GATGAAAGATCAGCTGTCAT+TGG + chr1.2:10418140-10418159 None:intergenic 40.0%
GCGCTAAAGAAAGCAGATAT+TGG - chr1.2:10422479-10422498 MS.gene54060:intron 40.0%
GTACTTATCCATACCAGGTA+CGG - chr1.2:10418258-10418277 MS.gene54060:intron 40.0%
GTCCTTGAACATGTAAGAGT+CGG - chr1.2:10420886-10420905 MS.gene54060:intron 40.0%
GTTCTCTGCAGTGATAAAAC+TGG - chr1.2:10420641-10420660 MS.gene54060:CDS 40.0%
GTTGACAGTACAAACCAAGT+TGG - chr1.2:10420347-10420366 MS.gene54060:intron 40.0%
TACGATATCCGGCTAGAATA+CGG + chr1.2:10418554-10418573 None:intergenic 40.0%
TACTTATCCATACCAGGTAC+GGG - chr1.2:10418259-10418278 MS.gene54060:intron 40.0%
TATGGAAGCTGCTGCTATTA+TGG - chr1.2:10418884-10418903 MS.gene54060:CDS 40.0%
TATGTGGAACCCTTTGTCAT+GGG - chr1.2:10418860-10418879 MS.gene54060:CDS 40.0%
TATTGAGGAAATGGCTGGAA+TGG - chr1.2:10420616-10420635 MS.gene54060:CDS 40.0%
TATTGTGCTTGGCAGTTACA+TGG - chr1.2:10423140-10423159 MS.gene54060:intron 40.0%
TCAGGATCAACTGTCAAGAA+GGG - chr1.2:10420260-10420279 MS.gene54060:CDS 40.0%
TCATAGCAGTGTATGCAGAT+TGG - chr1.2:10423697-10423716 MS.gene54060:intron 40.0%
TCCCATAAAATTCTGCGTCA+TGG - chr1.2:10419517-10419536 MS.gene54060:intron 40.0%
TCCTGAAAACACTTCTTGTG+TGG + chr1.2:10420246-10420265 None:intergenic 40.0%
TCTCACATAAAGGACTATGG+TGG + chr1.2:10418585-10418604 None:intergenic 40.0%
TGCTATTATGGCCATTGCTT+TGG - chr1.2:10418896-10418915 MS.gene54060:CDS 40.0%
TGTCTAGGAGGATCAAACAA+TGG + chr1.2:10421676-10421695 None:intergenic 40.0%
TTATGTGGAACCCTTTGTCA+TGG - chr1.2:10418859-10418878 MS.gene54060:CDS 40.0%
TTCAGGATCAACTGTCAAGA+AGG - chr1.2:10420259-10420278 MS.gene54060:CDS 40.0%
TTGTAACTAGGTCTCGCAAT+TGG - chr1.2:10423405-10423424 MS.gene54060:CDS 40.0%
TTGTCTGTCACTATGGCTAT+TGG - chr1.2:10420545-10420564 MS.gene54060:CDS 40.0%
TTGTGAATCGCGGAGAATAA+TGG + chr1.2:10419602-10419621 None:intergenic 40.0%
TTTCGGAAAAGCAGCTCATT+TGG - chr1.2:10420325-10420344 MS.gene54060:intron 40.0%
TTTGACATGCTTACCTCTAC+TGG + chr1.2:10420824-10420843 None:intergenic 40.0%
TTTGCTACTGGTATTGTGCT+TGG - chr1.2:10423129-10423148 MS.gene54060:intron 40.0%
! CAAGAGAGGAAGCATATTTG+TGG - chr1.2:10422425-10422444 MS.gene54060:intron 40.0%
! GAGAAAATAGGGAAGCACAA+TGG - chr1.2:10424134-10424153 MS.gene54060:intron 40.0%
! GGACTATCTTTTGTTCTCTC+AGG + chr1.2:10421622-10421641 None:intergenic 40.0%
! GGATGGAATCGACAATCTTT+TGG - chr1.2:10420481-10420500 MS.gene54060:intron 40.0%
! TCCTTTAGTTTCCAGCTATC+AGG + chr1.2:10423105-10423124 None:intergenic 40.0%
! TTTTCGCCGAATTACGTTTG+TGG + chr1.2:10421854-10421873 None:intergenic 40.0%
!! AATTGGCATCGATCTAGCAA+AGG - chr1.2:10421203-10421222 MS.gene54060:intron 40.0%
!! AGCTTCTAGGGTTGAAAATC+AGG - chr1.2:10420760-10420779 MS.gene54060:intron 40.0%
!! ATTGGCATCGATCTAGCAAA+GGG - chr1.2:10421204-10421223 MS.gene54060:intron 40.0%
!! CGTGGATTCTGTTTTTCTCT+AGG - chr1.2:10421964-10421983 MS.gene54060:CDS 40.0%
!! CTATACTTGCGGTGTTGTAT+CGG + chr1.2:10420461-10420480 None:intergenic 40.0%
!! CTATGGCTATTGGTTCTCAT+AGG - chr1.2:10420555-10420574 MS.gene54060:CDS 40.0%
!! CTTGTTGAAAGTGTCCAACT+TGG + chr1.2:10420364-10420383 None:intergenic 40.0%
!! GAAAAAGTTGGTATCGTGCA+CGG + chr1.2:10423193-10423212 None:intergenic 40.0%
!! GCACGATACCAACTTTTTCT+CGG - chr1.2:10423194-10423213 MS.gene54060:intron 40.0%
!! GGCTTATTATACTGACTTGC+AGG + chr1.2:10423373-10423392 None:intergenic 40.0%
!! GTTTTCTAGGGGTATGGATA+AGG - chr1.2:10420712-10420731 MS.gene54060:intron 40.0%
!! TCATTGAAAGTGTTGGAGGT+AGG + chr1.2:10424196-10424215 None:intergenic 40.0%
!!! ATGAGCTGCTTTTCCGAAAA+AGG + chr1.2:10420324-10420343 None:intergenic 40.0%
!!! ATGTTGATTTGGGTTTTGGC+CGG - chr1.2:10422165-10422184 MS.gene54060:CDS 40.0%
!!! TCTTTTTTTTGGTGGTGGCT+GGG - chr1.2:10419753-10419772 MS.gene54060:CDS 40.0%
!!! TTCTTTTTTTTGGTGGTGGC+TGG - chr1.2:10419752-10419771 MS.gene54060:CDS 40.0%
AAAGGACTATGGTGGTCTAC+AGG + chr1.2:10418577-10418596 None:intergenic 45.0%
AAGACAAGGTCTGACATCAG+AGG - chr1.2:10418755-10418774 MS.gene54060:intron 45.0%
AATGCTTCCTGATCCAGTAG+AGG - chr1.2:10420808-10420827 MS.gene54060:CDS 45.0%
AATGTTGATCAGGCTAGAGC+TGG - chr1.2:10421104-10421123 MS.gene54060:CDS 45.0%
ACAAAGTCTTGCCAATCAGG+GGG + chr1.2:10418939-10418958 None:intergenic 45.0%
ACCTGGTATGGATAAGTACC+CGG + chr1.2:10418257-10418276 None:intergenic 45.0%
AGTTTCCAGCTATCAGGTAG+TGG + chr1.2:10423099-10423118 None:intergenic 45.0%
ATGCTTACCTCTACTGGATC+AGG + chr1.2:10420818-10420837 None:intergenic 45.0%
ATGGACGTGTTTCAGGCTTA+TGG - chr1.2:10424462-10424481 MS.gene54060:intron 45.0%
ATGGAGCGGAATACTCTCAA+GGG - chr1.2:10424481-10424500 MS.gene54060:intron 45.0%
ATGGCCATTGCTTTGGCTAA+TGG - chr1.2:10418903-10418922 MS.gene54060:CDS 45.0%
ATTCGGCGAAAATGTAACCG+CGG - chr1.2:10421862-10421881 MS.gene54060:CDS 45.0%
CCAACAAAGTCTTGCCAATC+AGG + chr1.2:10418942-10418961 None:intergenic 45.0%
CCGCTATATTCTGAGTGGAA+AGG - chr1.2:10423821-10423840 MS.gene54060:intron 45.0%
CCTGATTGGCAAGACTTTGT+TGG - chr1.2:10418939-10418958 MS.gene54060:CDS 45.0%
CCTTGAGCAGATGAAAAACG+AGG - chr1.2:10417734-10417753 MS.gene54060:CDS 45.0%
CGATACAACACCGCAAGTAT+AGG - chr1.2:10420459-10420478 MS.gene54060:intron 45.0%
CGATTCCATCCCTATACTTG+CGG + chr1.2:10420472-10420491 None:intergenic 45.0%
CGCTATCACATAACACAACG+TGG + chr1.2:10419224-10419243 None:intergenic 45.0%
CGTCATCTGGTTGTACAGTT+TGG - chr1.2:10423761-10423780 MS.gene54060:intron 45.0%
CTGGCCATTGGTAAAGAAAC+AGG - chr1.2:10421994-10422013 MS.gene54060:CDS 45.0%
GAGTCAGTAGTGAAGCTGAA+GGG - chr1.2:10424511-10424530 MS.gene54060:intron 45.0%
GATATTGTCCTCACTGAACC+TGG - chr1.2:10422545-10422564 MS.gene54060:intron 45.0%
GCAATCCGCTATATTCTGAG+TGG - chr1.2:10423816-10423835 MS.gene54060:intron 45.0%
GCTTCCATAACCCATGACAA+AGG + chr1.2:10418873-10418892 None:intergenic 45.0%
GGAAACGTGCTGAAATTGCA+AGG - chr1.2:10424260-10424279 MS.gene54060:intron 45.0%
GGAATGTCACCAGTATCTTC+AGG + chr1.2:10418293-10418312 None:intergenic 45.0%
GGACAAGGTAGATATGTACG+CGG + chr1.2:10424003-10424022 None:intergenic 45.0%
GGACATACCTGGAAAAACTC+CGG + chr1.2:10422139-10422158 None:intergenic 45.0%
GTATGGATAAGTACCCGGAA+CGG + chr1.2:10418252-10418271 None:intergenic 45.0%
GTCAATCACCATCCGTATTG+TGG - chr1.2:10422732-10422751 MS.gene54060:intron 45.0%
GTCGATCAGTCTGCTTTAAC+AGG - chr1.2:10420194-10420213 MS.gene54060:CDS 45.0%
GTTTCAGCGCTATCATGTCT+AGG + chr1.2:10421691-10421710 None:intergenic 45.0%
TAAATTAAAGTCGGTGGCCG+CGG + chr1.2:10421882-10421901 None:intergenic 45.0%
TAGGAGAAGACCAGGTCTAT+CGG + chr1.2:10423438-10423457 None:intergenic 45.0%
TATCCATCATCTGCTCTGCT+TGG - chr1.2:10422045-10422064 MS.gene54060:CDS 45.0%
TATCTGCTTTCTTTAGCGCC+GGG + chr1.2:10422478-10422497 None:intergenic 45.0%
TATGGAGCGGAATACTCTCA+AGG - chr1.2:10424480-10424499 MS.gene54060:intron 45.0%
TATGGATAAGTACCCGGAAC+GGG + chr1.2:10418251-10418270 None:intergenic 45.0%
TCCATGACGCAACAGTTCTA+TGG + chr1.2:10419568-10419587 None:intergenic 45.0%
TCTCATAGGCTTTCACAGCA+AGG - chr1.2:10420569-10420588 MS.gene54060:CDS 45.0%
TGAGTCAGTAGTGAAGCTGA+AGG - chr1.2:10424510-10424529 MS.gene54060:intron 45.0%
TGCAATTTCAGCACGTTTCC+TGG + chr1.2:10424260-10424279 None:intergenic 45.0%
TGCTTAGGACTTCTCCTAGT+TGG + chr1.2:10423267-10423286 None:intergenic 45.0%
TGGTCTACAGGTACGATATC+CGG + chr1.2:10418565-10418584 None:intergenic 45.0%
TTGTCAAGAGGCTTCAAGAG+AGG - chr1.2:10422411-10422430 MS.gene54060:intron 45.0%
! AAAAGGTGAAGTACCCGTTC+CGG - chr1.2:10418235-10418254 MS.gene54060:intron 45.0%
! CTGATAATGACACTGAGACC+AGG + chr1.2:10422566-10422585 None:intergenic 45.0%
! GAACCCTTTGTCATGGGTTA+TGG - chr1.2:10418866-10418885 MS.gene54060:CDS 45.0%
! GACCGACTCTTACATGTTCA+AGG + chr1.2:10420891-10420910 None:intergenic 45.0%
! GAGTTGATTGAGAAGGCTGA+TGG - chr1.2:10422108-10422127 MS.gene54060:CDS 45.0%
! TGTGTGAGCGTTGTAAACCT+TGG + chr1.2:10421303-10421322 None:intergenic 45.0%
!! ATTGATAGGTTTGCTGAGCG+TGG - chr1.2:10421470-10421489 MS.gene54060:CDS 45.0%
!! CAGAAAGATTAGGAGTGCTC+AGG + chr1.2:10423632-10423651 None:intergenic 45.0%
!! CCTCGTTTTTCATCTGCTCA+AGG + chr1.2:10417737-10417756 None:intergenic 45.0%
!! CTGCTTTTCCGAAAAAGGTG+TGG + chr1.2:10420319-10420338 None:intergenic 45.0%
!! CTTTGGCTAATGGTGATGGA+AGG - chr1.2:10418913-10418932 MS.gene54060:CDS 45.0%
!! GATGCTGCAGTTTTAGTACC+AGG - chr1.2:10420098-10420117 MS.gene54060:intron 45.0%
!! TGAGGTGTTTTCTAGGGGTA+TGG - chr1.2:10420706-10420725 MS.gene54060:intron 45.0%
!! TTGAAAGTGTTGGAGGTAGG+AGG + chr1.2:10424193-10424212 None:intergenic 45.0%
!! TTGGCATCGATCTAGCAAAG+GGG - chr1.2:10421205-10421224 MS.gene54060:intron 45.0%
!! TTTTTCTCTAGGGGATCAGC+TGG - chr1.2:10421975-10421994 MS.gene54060:CDS 45.0%
!!! CTTTTGGTGCTCTTGATTGG+TGG - chr1.2:10420497-10420516 MS.gene54060:intron 45.0%
!!! CTTTTTTTTGGTGGTGGCTG+GGG - chr1.2:10419754-10419773 MS.gene54060:CDS 45.0%
!!! GCCACACAAGAAGTGTTTTC+AGG - chr1.2:10420242-10420261 MS.gene54060:CDS 45.0%
!!! AATATATTTTTTATTGAATT+TGG - chr1.2:10421081-10421100 MS.gene54060:CDS 5.0%
!!! GATTTTTTAATTTATTATTT+TGG - chr1.2:10422843-10422862 MS.gene54060:intron 5.0%
!!! TTTTTTTTTTAAATTAAAGT+AGG + chr1.2:10418522-10418541 None:intergenic 5.0%
AAACAAAACGTGCGTGACGG+CGG + chr1.2:10418010-10418029 None:intergenic 50.0%
AAGATAGTCCTGGTGCACCA+TGG - chr1.2:10421632-10421651 MS.gene54060:CDS 50.0%
ACAAATTGCCATGGTGCACC+AGG + chr1.2:10421643-10421662 None:intergenic 50.0%
ACACCAGAGTCTAGCGTAAG+TGG + chr1.2:10421339-10421358 None:intergenic 50.0%
ACGGCTATTGAGGAAATGGC+TGG - chr1.2:10420611-10420630 MS.gene54060:CDS 50.0%
ACTGTACAACCAGATGACGC+CGG + chr1.2:10423760-10423779 None:intergenic 50.0%
AGAGCAGTCCTCTTGTCTAC+AGG + chr1.2:10421161-10421180 None:intergenic 50.0%
AGATGGTGTAAATGACGCCC+CGG - chr1.2:10422457-10422476 MS.gene54060:intron 50.0%
ATCTGCTTTCTTTAGCGCCG+GGG + chr1.2:10422477-10422496 None:intergenic 50.0%
CAACACCGCAAGTATAGGGA+TGG - chr1.2:10420464-10420483 MS.gene54060:intron 50.0%
CAACCACTTACGCTAGACTC+TGG - chr1.2:10421333-10421352 MS.gene54060:intron 50.0%
CAAGGTCTGACATCAGAGGA+AGG - chr1.2:10418759-10418778 MS.gene54060:intron 50.0%
CAGCAAGAGGAGTTTGGACA+AGG + chr1.2:10424018-10424037 None:intergenic 50.0%
CATCTCCACTACCTGATAGC+TGG - chr1.2:10423091-10423110 MS.gene54060:intron 50.0%
CCTATCTGTTTGCGGGGATA+AGG - chr1.2:10423977-10423996 MS.gene54060:intron 50.0%
CCTTATCCCCGCAAACAGAT+AGG + chr1.2:10423980-10423999 None:intergenic 50.0%
CGAGCCTTTGTGCAACTGTA+AGG - chr1.2:10423921-10423940 MS.gene54060:intron 50.0%
CGTGTTTCAGGCTTATGGAG+CGG - chr1.2:10424467-10424486 MS.gene54060:intron 50.0%
GAGCGTGGACTTCGATCTTT+AGG - chr1.2:10421485-10421504 MS.gene54060:CDS 50.0%
GCCATAGAACTGTTGCGTCA+TGG - chr1.2:10419564-10419583 MS.gene54060:intron 50.0%
GGCTATCAGCAAGAGGAGTT+TGG + chr1.2:10424024-10424043 None:intergenic 50.0%
GGGCTCATGCAGTGATTGAT+AGG - chr1.2:10421456-10421475 MS.gene54060:intron 50.0%
GGTGCACCATGGCAATTTGT+TGG - chr1.2:10421643-10421662 MS.gene54060:CDS 50.0%
GTGGAGGTTCCTGAAGATAC+TGG - chr1.2:10418281-10418300 MS.gene54060:intron 50.0%
TACACGAGGCTATCAGCAAG+AGG + chr1.2:10424031-10424050 None:intergenic 50.0%
TCAGCGCTATCATGTCTAGG+AGG + chr1.2:10421688-10421707 None:intergenic 50.0%
TCCAAAGACTTGAAGCCTGC+TGG + chr1.2:10418787-10418806 None:intergenic 50.0%
TCCGGGTACTTATCCATACC+AGG - chr1.2:10418253-10418272 MS.gene54060:intron 50.0%
TCTGGCTGCAAGAGCTTCTA+GGG - chr1.2:10420748-10420767 MS.gene54060:intron 50.0%
TGACCAAGCAGAGCAGATGA+TGG + chr1.2:10422051-10422070 None:intergenic 50.0%
TGCTCTGCTTGGTCAAGACA+GGG - chr1.2:10422056-10422075 MS.gene54060:CDS 50.0%
TGGTCTTTCACCGATAGACC+TGG - chr1.2:10423425-10423444 MS.gene54060:CDS 50.0%
TGTGTGGCATACTTCGTCAC+AGG + chr1.2:10420230-10420249 None:intergenic 50.0%
TTATCCATACCAGGTACGGG+TGG - chr1.2:10418262-10418281 MS.gene54060:intron 50.0%
! AAAGGTGAAGTACCCGTTCC+GGG - chr1.2:10418236-10418255 MS.gene54060:intron 50.0%
! ACCGGTGTCCACACCTTTTT+CGG - chr1.2:10420308-10420327 MS.gene54060:intron 50.0%
! AGACCTGGTCTTCTCCTACT+AGG - chr1.2:10423440-10423459 MS.gene54060:CDS 50.0%
! AGCGTAAGTGGTTGATGCTC+AGG + chr1.2:10421327-10421346 None:intergenic 50.0%
! GCGTAAGTGGTTGATGCTCA+GGG + chr1.2:10421326-10421345 None:intergenic 50.0%
! GGATTTGCCGGAGTTTTTCC+AGG - chr1.2:10422129-10422148 MS.gene54060:CDS 50.0%
! TAGGGAAGCACAATGGGCAT+CGG - chr1.2:10424141-10424160 MS.gene54060:intron 50.0%
! TCCGAAAAAGGTGTGGACAC+CGG + chr1.2:10420312-10420331 None:intergenic 50.0%
! TCTCTGGAAAATGGACCTGC+TGG + chr1.2:10422600-10422619 None:intergenic 50.0%
! TTCTGGCTGCAAGAGCTTCT+AGG - chr1.2:10420747-10420766 MS.gene54060:intron 50.0%
!! CAGCTATCAGGTAGTGGAGA+TGG + chr1.2:10423093-10423112 None:intergenic 50.0%
!! CTTAGCCTTGGGAGCTAAAC+CGG + chr1.2:10419048-10419067 None:intergenic 50.0%
!! GAGAAGGCTGATGGATTTGC+CGG - chr1.2:10422117-10422136 MS.gene54060:CDS 50.0%
!! TGCAGGACAAGTTTGGTGTG+AGG - chr1.2:10423306-10423325 MS.gene54060:CDS 50.0%
AGAGCTGCCATCATCTCAGC+AGG + chr1.2:10423347-10423366 None:intergenic 55.0%
AGCTAAACCGGCCATGAGAG+CGG + chr1.2:10419036-10419055 None:intergenic 55.0%
AGGTAGGAGGCTGAAGACCA+TGG + chr1.2:10424180-10424199 None:intergenic 55.0%
CACTGAGACCAGGTTCAGTG+AGG + chr1.2:10422556-10422575 None:intergenic 55.0%
CAGAGATTGCAGAGCAAGCC+AGG - chr1.2:10424239-10424258 MS.gene54060:intron 55.0%
CTGCTCTGCTTGGTCAAGAC+AGG - chr1.2:10422055-10422074 MS.gene54060:CDS 55.0%
GCCAGCAGGCTTCAAGTCTT+TGG - chr1.2:10418783-10418802 MS.gene54060:intron 55.0%
GGCTAGAGCTGGCATCAATG+AGG - chr1.2:10421115-10421134 MS.gene54060:CDS 55.0%
TAAGGGAATGGGATGGGGCT+GGG - chr1.2:10423734-10423753 MS.gene54060:intron 55.0%
TAGCAAAGGGGCTCCTGAAC+AGG - chr1.2:10421217-10421236 MS.gene54060:intron 55.0%
TCGGCACAAAGATCACGCCA+TGG - chr1.2:10424160-10424179 MS.gene54060:intron 55.0%
TTAAGGGAATGGGATGGGGC+TGG - chr1.2:10423733-10423752 MS.gene54060:intron 55.0%
TTGTCCTCGCGAGCTTAGCT+CGG + chr1.2:10419824-10419843 None:intergenic 55.0%
! CGAGCTTAGCTCGGTTGGTA+AGG + chr1.2:10419815-10419834 None:intergenic 55.0%
! CGGTTTAGCTCCCAAGGCTA+AGG - chr1.2:10419046-10419065 MS.gene54060:intron 55.0%
!! ATCGGAGGCGTCGAGCAATT+TGG + chr1.2:10421001-10421020 None:intergenic 55.0%
!! CGAGGACAAAAGCGCCTAGT+AGG + chr1.2:10423457-10423476 None:intergenic 55.0%
ACCTCCACCCGTACCTGGTA+TGG + chr1.2:10418269-10418288 None:intergenic 60.0%
AGCTGATGCGCGTCTACTCG+AGG - chr1.2:10420157-10420176 MS.gene54060:CDS 60.0%
CATCAGAGGAAGGAGCCAGC+AGG - chr1.2:10418769-10418788 MS.gene54060:intron 60.0%
CGAGTAGACGCGCATCAGCT+GGG + chr1.2:10420157-10420176 None:intergenic 60.0%
CTAGGGGATCAGCTGGCCAT+TGG - chr1.2:10421982-10422001 MS.gene54060:CDS 60.0%
GCGCCTAGTAGGAGAAGACC+AGG + chr1.2:10423446-10423465 None:intergenic 60.0%
GCTGATGCGCGTCTACTCGA+GGG - chr1.2:10420158-10420177 MS.gene54060:CDS 60.0%
TAAACCGGCCATGAGAGCGG+CGG + chr1.2:10419033-10419052 None:intergenic 60.0%
TCAGGCTTACCAGCTGAGCG+AGG + chr1.2:10423475-10423494 None:intergenic 60.0%
TCAGTGCTGTGCTCACCAGC+AGG - chr1.2:10422582-10422601 MS.gene54060:intron 60.0%
TCCATACCAGGTACGGGTGG+AGG - chr1.2:10418265-10418284 MS.gene54060:intron 60.0%
TCGAGTAGACGCGCATCAGC+TGG + chr1.2:10420158-10420177 None:intergenic 60.0%
! CATGGCCGGTTTAGCTCCCA+AGG - chr1.2:10419040-10419059 MS.gene54060:intron 60.0%
! CGCTTTTGTCCTCGCTCAGC+TGG - chr1.2:10423463-10423482 MS.gene54060:CDS 60.0%
! GCTCGACGCCTCCGATTTTG+AGG - chr1.2:10421005-10421024 MS.gene54060:intron 60.0%
! GTGATGGAAGGCCCCCTGAT+TGG - chr1.2:10418925-10418944 MS.gene54060:CDS 60.0%
CAGGAACCTCCACCCGTACC+TGG + chr1.2:10418274-10418293 None:intergenic 65.0%
CCAACCGAGCTAAGCTCGCG+AGG - chr1.2:10419817-10419836 MS.gene54060:CDS 65.0%
CCTCGCGAGCTTAGCTCGGT+TGG + chr1.2:10419820-10419839 None:intergenic 65.0%
CAACGCTGCCGCCGCTCTCA+TGG - chr1.2:10419022-10419041 MS.gene54060:intron 70.0%
GGAATGGGATGGGGCTGGGC+CGG - chr1.2:10423738-10423757 MS.gene54060:intron 70.0%
GAGAGCGGCGGCAGCGTTGC+CGG + chr1.2:10419021-10419040 None:intergenic 75.0%
GCTGCCGCCGCTCTCATGGC+CGG - chr1.2:10419026-10419045 MS.gene54060:intron 75.0%
! GGGGCTGGGCCGGCGTCATC+TGG - chr1.2:10423748-10423767 MS.gene54060:intron 80.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 10417720 10424573 10417720 ID=MS.gene54060
chr1.2 mRNA 10417720 10424573 10417720 ID=MS.gene54060.t1;Parent=MS.gene54060
chr1.2 exon 10424526 10424573 10424526 ID=MS.gene54060.t1.exon1;Parent=MS.gene54060.t1
chr1.2 CDS 10424526 10424573 10424526 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10423226 10423582 10423226 ID=MS.gene54060.t1.exon2;Parent=MS.gene54060.t1
chr1.2 CDS 10423226 10423582 10423226 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10421464 10422225 10421464 ID=MS.gene54060.t1.exon3;Parent=MS.gene54060.t1
chr1.2 CDS 10421464 10422225 10421464 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10421055 10421177 10421055 ID=MS.gene54060.t1.exon4;Parent=MS.gene54060.t1
chr1.2 CDS 10421055 10421177 10421055 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10420773 10420877 10420773 ID=MS.gene54060.t1.exon5;Parent=MS.gene54060.t1
chr1.2 CDS 10420773 10420877 10420773 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10420536 10420680 10420536 ID=MS.gene54060.t1.exon6;Parent=MS.gene54060.t1
chr1.2 CDS 10420536 10420680 10420536 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10420143 10420307 10420143 ID=MS.gene54060.t1.exon7;Parent=MS.gene54060.t1
chr1.2 CDS 10420143 10420307 10420143 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10419659 10419897 10419659 ID=MS.gene54060.t1.exon8;Parent=MS.gene54060.t1
chr1.2 CDS 10419659 10419897 10419659 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10419540 10419572 10419540 ID=MS.gene54060.t1.exon9;Parent=MS.gene54060.t1
chr1.2 CDS 10419540 10419572 10419540 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10419343 10419424 10419343 ID=MS.gene54060.t1.exon10;Parent=MS.gene54060.t1
chr1.2 CDS 10419343 10419424 10419343 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10419078 10419238 10419078 ID=MS.gene54060.t1.exon11;Parent=MS.gene54060.t1
chr1.2 CDS 10419078 10419238 10419078 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10418809 10418982 10418809 ID=MS.gene54060.t1.exon12;Parent=MS.gene54060.t1
chr1.2 CDS 10418809 10418982 10418809 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10418424 10418606 10418424 ID=MS.gene54060.t1.exon13;Parent=MS.gene54060.t1
chr1.2 CDS 10418424 10418606 10418424 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10418012 10418190 10418012 ID=MS.gene54060.t1.exon14;Parent=MS.gene54060.t1
chr1.2 CDS 10418012 10418190 10418012 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
chr1.2 exon 10417720 10417816 10417720 ID=MS.gene54060.t1.exon15;Parent=MS.gene54060.t1
chr1.2 CDS 10417720 10417816 10417720 ID=cds.MS.gene54060.t1;Parent=MS.gene54060.t1
Gene Sequence

>MS.gene54060

ATGGGTAGCATCAACCTTGAGCAGATGAAAAACGAGGATGTCAATTTGGTATAATACTTCTCTTCTCTCCATCTCTCTCTCTGTTTTTTTTTTAGCTCCATAAGAATTTGTTCATGTTTATGCCTCAAAAAATATTGGTCATGTTATTTATTACGATGATATTTCCATCAAATCAAATATTATTAATGTTTGATTTCATAGAGATCTATATATATGAAAAATTTACAGTCATCAATGATTTTTTATTTTTTTTTTGTTGATAAATCATGAATGATGCTTTAAACATGCCGCCGTCACGCACGTTTTGTTTCTTTTGTCACCGATGACCAAACTATATGAAAGTCATACTAAGAACTCTTAGGGTTTATGTTTGTTTGTTTTTTAATTGGTAGTGGTAACAGGAGATTTTAGGGTTTACCAATGACAGCTGATCTTTCATCTTTTCAAAATTACTAAAAAATATATTTTTAATATGCATGAAAAATTATTTATATGTCGATTATCACTCTTTTATAAAAAGGTGAAGTACCCGTTCCGGGTACTTATCCATACCAGGTACGGGTGGAGGTTCCTGAAGATACTGGTGACATTCCGTTTTTGTTCATGAATGAAAATTGTAGTTTTCTCTTATATATTAATATATTAATACGATAATATAATATTATATGCATATGAGATTTCTTTTGTTGTTGTTATATAACCAACTTTAATATTTGGCTTTTTAAAAAAATATCTGACTTATAATTTAGCTCTTTCGTATTATATTGTATAACAAAACTCTTGATTTTATTGATATGCTCCTACTTTAATTTAAAAAAAAAAAAATAAATGCCGTATTCTAGCCGGATATCGTACCTGTAGACCACCATAGTCCTTTATGTGAGAATGCTAATTATAATTTTGAAGGGTTTTTACTAGCTATATAATAATCTATGCATATTGCATGACATGAGACAAATGAAACCTTGTTGATTTTGTTGTTTGTTACTAGGAACGGATTCCAATAGAAGAAGTGTTTGATCATCTGAAATGTTCAAGACAAGGTCTGACATCAGAGGAAGGAGCCAGCAGGCTTCAAGTCTTTGGACCAAACAAACTGGAAGAGAAAACGGAGAACAAGTTTTTGAAGTTTTTGGGTTTTATGTGGAACCCTTTGTCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCTTTGGCTAATGGTGATGGAAGGCCCCCTGATTGGCAAGACTTTGTTGGAATCATTGCTTTGTTAGTCATCAACTCGACCATCAGTTTCATTGAAGAAAACAATGCCGGCAACGCTGCCGCCGCTCTCATGGCCGGTTTAGCTCCCAAGGCTAAGGTTTGAAAATTTTACTTCTCTTTACTAACTCATCATTGTAAATAAATCACAGTTCACTTATCTATCTTACGTTATGCGATTATTTATTTATTTATTTATTTAATATTAGAAAAACCGTTACTACTTTATATTAAGAAAACGCAATTTTCTTATCCACGTTGTGTTATGTGATAGCGTCTCTATCTATTTTTTAATTGTTTATTATATATGTATAAAAACAAACTTTCATACTAGTTGATTTTTTTCACATTCGTGTTGTTATCATGTTCCATTTGCGTATATAAGCTCTGTTTGACCTAACTTATTTTTGACGTATCAAGAAGTTACACAAAATTGTATTTTTAGAATGATCTTAATTAAAAACAAGAGATTATATTCTATGCAGTGTTGTTAAACAACGGGTATATAGCAACGCTATTGCATTGCAAAATTTGAACAAATTGCTATCGTCCCATAAAATTCTGCGTCATGGAATTTTAATAGTGGCTATAACAATGCCATAGAACTGTTGCGTCATGGAGTTTTAATAAACCATTATTCTCCGCGATTCACAATTGACAACATTGTTTTTATGTATAGAATATATAAACAACTTTTCAAAAGTAACTGAGAAGTTTTTTAAATCAAATAAAAGACATTTGATAATTTTATCTATTTGATTATTAATGAACTCAAATCTTATCATTCTTTTTTTTGGTGGTGGCTGGGGTTCGAACCTCAGACCTTGCATATATTATGCATTGTCCTTACCAACCGAGCTAAGCTCGCGAGGACAAATTTTATCATTCTATCAACAAGAATAAAATCTTTTAAACTAAACAATAACAATAATCAACAAACAACTTAGCTTTGTTTTTTATACTCTTATTTTTAGTTTTAATTTTAATGTTTAAAGTAGTGTTTATGACAAAAAATTATATATGCATGTGCACGCACACTATGTGTGAATCTAGTTTATTATTAACATTTGTTCAATTTTTGTGGCCACCAAAAAATTTAGGTACTAAGAGATGGCAAATGGAGTGAACAAGATGCTGCAGTTTTAGTACCAGGAGACATAATCAGCATTAAGTTAGGAGACATCATCCCAGCTGATGCGCGTCTACTCGAGGGCGATGCTTTAAGCGTCGATCAGTCTGCTTTAACAGGAGAATCACTTCCTGTGACGAAGTATGCCACACAAGAAGTGTTTTCAGGATCAACTGTCAAGAAGGGTGAGATTGAAGCAATTGTGTATGCAACCGGTGTCCACACCTTTTTCGGAAAAGCAGCTCATTTGGTTGACAGTACAAACCAAGTTGGACACTTTCAACAAGTGCTTACAGCAATTGGAAATTTCTGCATTTGTTCAATTGCTGTTGGAATACTCATTGAGATTATTGTGATGTATCCGATACAACACCGCAAGTATAGGGATGGAATCGACAATCTTTTGGTGCTCTTGATTGGTGGAATTCCCATTGCAATGCCAACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCATAGGCTTTCACAGCAAGGTGCAATTACAAAAAGAATGACGGCTATTGAGGAAATGGCTGGAATGGATGTTCTCTGCAGTGATAAAACTGGAACTCTCACTTTGAATAAGCTTAGTGTTGATACAAACTTGATTGAGGTGTTTTCTAGGGGTATGGATAAGGACTTTGTGATACTTCTGGCTGCAAGAGCTTCTAGGGTTGAAAATCAGGATGCTATAGATACTGCAATTGTTGGAATGCTTCCTGATCCAGTAGAGGTAAGCATGTCAAATTAAAATCAAAATAAATCTCTTTCGAGTAAATCAACATTTTAGTCCTTGAACATGTAAGAGTCGGTCAAATTAGTCTCTCAAATTTACAAAATAGCAATTTAGTCTCTTAAATTGAGTCATATTTTTTTTTTTCTATTGCATAAATTTGAGGGACCAAATTGCTCGACGCCTCCGATTTTGAGGATCGAAATGCTGATTTACTCAGTCTCTTTCTTTGGACTAGAAAGCAAAATATGAATATATTTTTTATTGAATTTGGAATGTTGATCAGGCTAGAGCTGGCATCAATGAGGTGCATTTTCTACCATTCAATCCTGTAGACAAGAGGACTGCTCTTACCTATATTGATTCTGATGGAAATTGGCATCGATCTAGCAAAGGGGCTCCTGAACAGGTAAATATGAGTTTCAACTTGTTATGTGTTTTCTTTATCCGTAGGAATTGAACTATGTATTCCAAGGTTTACAACGCTCACACACCCTGAGCATCAACCACTTACGCTAGACTCTGGTGTTATCTTTGTCATGTTTAATAAGATGACTAACTAAGACATGATGTTATGTTATTTCAGATATTGGAGCTTTGTAACTGCAAAGAGAATGTGAGAAAAAGGGCTCATGCAGTGATTGATAGGTTTGCTGAGCGTGGACTTCGATCTTTAGGTGTTGCTTATCAGGTAAGTAAAGATGATATCAGCTATGTTTATTTTTCGACTTGAACGAATTCCCTTGTTTTATTTCTGCTTTTATTGTATGATTTGTGTAACAGGAAGTACCTGAGAGAACAAAAGATAGTCCTGGTGCACCATGGCAATTTGTTGGTTTGTTACCATTGTTTGATCCTCCTAGACATGATAGCGCTGAAACGATTAAAAGAGCTCTTGAACTTGGTGTGAATGTCAAGATGATTACTGGTATGATATGAGATCATACTTTACTATATTACATCGTTCTAAATTGCAGTGTGTAACTGCAATTGTGATTGCAATATAAAATTTTAGAGGTCTCCACAAACGTAATTCGGCGAAAATGTAACCGCGGCCACCGACTTTAATTTAGAACCATTTGTAGCTCATACCATAAATCAAAGTTTATTATAGCTTTGAAGTTTGGAAATAATCGTGGATTCTGTTTTTCTCTAGGGGATCAGCTGGCCATTGGTAAAGAAACAGGTAGAAGGCTTGGAATGGGAACAAATATGTATCCATCATCTGCTCTGCTTGGTCAAGACAGGGATGCTTCTACTTTAGATGTTCCTATTGATGAGTTGATTGAGAAGGCTGATGGATTTGCCGGAGTTTTTCCAGGTATGTCCTTGTTGATGTTGATTTGGGTTTTGGCCGGAGTTTTGATTGTCAAATTGCTCCATCATTTAGATAGATTCTCTGTCAAAACCAAAAATCAACGTCGACAATCATTTATATATTTAACATATTTAAGTTGTTTTGGACACCGACACTTCTTAGACACACTTTGGACACATGTCAGACACCTCTTAATGAAGTCCAATAAAAAAATATTTAACCTCTTTTCTCTTTGTATGATATTATAGAACACAAATATGAAATTGTCAAGAGGCTTCAAGAGAGGAAGCATATTTGTGGAATGACTGGAGATGGTGTAAATGACGCCCCGGCGCTAAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGTCTCAGTGTCATTATCAGTGCTGTGCTCACCAGCAGGTCCATTTTCCAGAGAATGAAGAATTATACCGTAAGTTTCCATGCGTATCTAATTCAATCTTTTGACTTTACTTAAATTTTTAGTTTTCTAATCACAAAATGTTTGGTTGTGAACAGATTTATGCTGTGTCAATCACCATCCGTATTGTGGTATGTGTTGAAGTCGGCTTTACAAAATATTGTTACATTTTTCTTTACGTACTTGAACATTCAAATCATAAATATACTTAACGATCACTGATTTTTTAATTTATTATTTTGGCAGTTTGGTTTCATGTTAATTGCTTTGATTTGGAAATTTGATTTTGCACCATTCATGGTTTTGATCATTGCAATACTGAATGATGGTAAGATAACATTATCACGATTCACGACTTTCATTTTATTTTAATATTTTCTAACTAATGTAAAATATTTAACTTAATGTCCTAACACTGCCATATACATGTAGGTACCATTATGACAATATCAAAGGATAGAGTTAAACCATCTCCACTACCTGATAGCTGGAAACTAAAGGAAATATTTGCTACTGGTATTGTGCTTGGCAGTTACATGGCCCTAATGACAGTCATATTTTTCTGGGCCGTGCACGATACCAACTTTTTCTCGGTAAATTAAATTTATATATGCCTATAGTTTTTCCTTTCAATATCATCACCAACTAGGAGAAGTCCTAAGCACTATTAGCTTTAAACATGTTGCAGGACAAGTTTGGTGTGAGGTCTTTGAGAAATAATCCTGCTGAGATGATGGCAGCTCTATACCTGCAAGTCAGTATAATAAGCCAAGCGCTAATTTTTGTAACTAGGTCTCGCAATTGGTCTTTCACCGATAGACCTGGTCTTCTCCTACTAGGCGCTTTTGTCCTCGCTCAGCTGGTAAGCCTGAACCTCTTATTAAAAATAATAATTGCATAAAATTTTACCACTTCTATTATTTTTATTGATAGAAGCGGACGAACACACACTGACGTGCCATTCTTTCCGCTAATACTCTTGCTATTATTTCTGCAAGGATATAATCCTGAGCACTCCTAATCTTTCTGTTATGGTAACAATAGTTTGTTTTGTAACTTGACAGGTTGCAACAGTCATAGCAGTGTATGCAGATTGGGAATTTGCAAGAATTAAGGGAATGGGATGGGGCTGGGCCGGCGTCATCTGGTTGTACAGTTTGGTGACCTACATCCCTCTTGATTTACTGAAAATTGCAATCCGCTATATTCTGAGTGGAAAGGCATGGAACAATATTTTGGAAAACAAGGTAGGTTATTTTTATTTTCGCTTTATCATTTCGTCACATTGTTGATAAGGACGAGCCTTTGTGCAACTGTAAGGTTGTCTCGCCTTATGTTCAAATATTGGAAATAACCTATCTGTTTGCGGGGATAAGGCCGCGTACATATCTACCTTGTCCAAACTCCTCTTGCTGATAGCCTCGTGTACTTGCATTTTTTTTCTTCTTTTATCTAATTGTTTCATATTTTCTCGTTACAGACTGCCTTCACATCAAAGAAAGACTATGGTAGAGAAAATAGGGAAGCACAATGGGCATCGGCACAAAGATCACGCCATGGTCTTCAGCCTCCTACCTCCAACACTTTCAATGAGTATAGTAGCTATGAGGAGCTTTCAGAGATTGCAGAGCAAGCCAGGAAACGTGCTGAAATTGCAAGGTAAGCCTCGAAGAGTAATGAATTATGTGGCATAAACACTTATGAGTGAAAGTGTGTCTGTATCCTACACCGACACATAATTACAATCAATCACTTTTATTTATTTTTTTAAATGATTATCAGAGTCTACGTGTTAATGTCGTATGTAATGTTTATTTGCGACTGATTCATTGTTAATGAATGGACGTGTTTCAGGCTTATGGAGCGGAATACTCTCAAGGGTCGTGTTGAGTCAGTAGTGAAGCTGAAGGGCCTCGACATTGACACACTTAATACTAATTATTCAATTTAG
Protein sequence

>MS.gene54060.t1

MGSINLEQMKNEDVNLERIPIEEVFDHLKCSRQGLTSEEGASRLQVFGPNKLEEKTENKFLKFLGFMWNPLSWVMEAAAIMAIALANGDGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQDAAVLVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPVTKYATQEVFSGSTVKKGEIEAIVYATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIGNFCICSIAVGILIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDTNLIEVFSRGMDKDFVILLAARASRVENQDAIDTAIVGMLPDPVEARAGINEVHFLPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILELCNCKENVRKRAHAVIDRFAERGLRSLGVAYQEVPERTKDSPGAPWQFVGLLPLFDPPRHDSAETIKRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDRDASTLDVPIDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYMALMTVIFFWAVHDTNFFSDKFGVRSLRNNPAEMMAALYLQVSIISQALIFVTRSRNWSFTDRPGLLLLGAFVLAQLVATVIAVYADWEFARIKGMGWGWAGVIWLYSLVTYIPLDLLKIAIRYILSGKAWNNILENKTAFTSKKDYGRENREAQWASAQRSRHGLQPPTSNTFNEYSSYEELSEIAEQARKRAEIARLMERNTLKGRVESVVKLKGLDIDTLNTNYSI