AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54078.t1 MTR_1g009960 97.656 384 8 1 1 384 17 399 0.0 783
MS.gene54078.t1 MTR_1g009960 97.289 332 8 1 1 332 17 347 0.0 676
MS.gene54078.t1 MTR_3g108740 67.617 386 114 4 1 383 2 379 0.0 560
MS.gene54078.t1 MTR_4g127550 64.567 381 128 2 3 383 20 393 0.0 519
MS.gene54078.t1 MTR_2g037600 60.938 384 141 4 1 383 17 392 1.56e-170 481
MS.gene54078.t1 MTR_2g037620 55.820 378 149 4 6 383 24 383 2.72e-150 430
MS.gene54078.t1 MTR_1g016880 38.147 367 199 6 19 380 28 371 3.04e-78 246
MS.gene54078.t1 MTR_1g110290 39.211 380 190 9 14 377 32 386 6.48e-76 241
MS.gene54078.t1 MTR_2g005350 43.000 300 149 3 87 384 159 438 3.78e-73 234
MS.gene54078.t1 MTR_8g015500 40.881 318 165 6 62 377 110 406 5.88e-71 228
MS.gene54078.t1 MTR_6g083830 42.456 285 138 4 95 375 148 410 1.38e-68 222
MS.gene54078.t1 MTR_5g055480 39.683 315 163 5 64 375 91 381 2.68e-68 221
MS.gene54078.t1 MTR_5g006930 41.754 285 140 4 95 375 115 377 6.90e-68 219
MS.gene54078.t1 MTR_5g006920 41.404 285 141 4 95 375 150 412 1.22e-64 212
MS.gene54078.t1 MTR_3g104840 37.580 314 153 5 65 375 111 384 1.99e-63 208
MS.gene54078.t1 MTR_2g024120 36.913 298 153 10 96 366 61 350 3.97e-56 189
MS.gene54078.t1 MTR_8g094180 33.648 318 172 8 92 377 51 361 1.33e-50 174
MS.gene54078.t1 MTR_8g094180 35.849 265 139 6 92 328 51 312 7.71e-46 160
MS.gene54078.t1 MTR_3g106930 33.611 360 191 18 34 377 42 369 1.31e-41 150
MS.gene54078.t1 MTR_2g087610 30.769 325 161 11 87 377 66 360 6.93e-39 143
MS.gene54078.t1 MTR_1g031060 34.653 303 149 10 96 377 80 354 1.54e-34 131
MS.gene54078.t1 MTR_1g048320 31.818 308 163 7 89 377 57 336 1.78e-34 130
MS.gene54078.t1 MTR_1g031080 33.544 316 150 15 85 377 6 284 8.58e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54078.t1 AT4G31350 60.417 384 143 3 1 384 1 375 6.07e-167 472
MS.gene54078.t1 AT4G31350 60.417 384 143 3 1 384 1 375 6.07e-167 472
MS.gene54078.t1 AT4G31350 60.417 384 143 3 1 384 1 375 6.07e-167 472
MS.gene54078.t1 AT5G57270 56.806 382 156 3 5 383 10 385 8.30e-164 464
MS.gene54078.t1 AT5G57270 56.806 382 156 3 5 383 10 385 8.30e-164 464
MS.gene54078.t1 AT5G57270 56.806 382 156 3 5 383 10 385 8.30e-164 464
MS.gene54078.t1 AT5G57270 56.806 382 156 3 5 383 10 385 8.30e-164 464
MS.gene54078.t1 AT5G57270 56.806 382 156 3 5 383 10 385 8.30e-164 464
MS.gene54078.t1 AT4G31350 59.635 384 141 4 1 384 1 370 9.36e-162 458
MS.gene54078.t1 AT2G19160 55.497 382 162 3 3 384 20 393 1.25e-161 459
MS.gene54078.t1 AT2G19160 55.497 382 162 3 3 384 20 393 1.25e-161 459
MS.gene54078.t1 AT4G25870 54.167 384 168 3 1 382 8 385 4.66e-161 457
MS.gene54078.t1 AT4G30060 54.712 382 163 4 3 382 21 394 3.23e-154 441
MS.gene54078.t1 AT4G30060 54.712 382 163 4 3 382 21 394 3.23e-154 441
MS.gene54078.t1 AT3G21310 43.396 318 156 5 62 377 81 376 8.39e-77 242
MS.gene54078.t1 AT3G21310 43.396 318 156 5 62 377 81 376 8.39e-77 242
MS.gene54078.t1 AT5G11730 43.574 319 154 6 62 377 84 379 3.74e-76 241
MS.gene54078.t1 AT5G25970 44.406 286 134 4 95 377 117 380 2.90e-75 238
MS.gene54078.t1 AT5G25970 44.406 286 134 4 95 377 117 380 2.90e-75 238
MS.gene54078.t1 AT5G25970 44.406 286 134 4 95 377 117 380 2.90e-75 238
MS.gene54078.t1 AT1G51770 42.236 322 160 6 59 377 87 385 2.53e-74 236
MS.gene54078.t1 AT5G16170 44.170 283 140 3 97 377 136 402 6.03e-73 233
MS.gene54078.t1 AT1G73810 44.599 287 131 5 97 377 147 411 6.91e-73 233
MS.gene54078.t1 AT1G10280 42.105 323 164 5 64 384 111 412 1.08e-71 230
MS.gene54078.t1 AT1G68390 40.000 325 167 6 58 377 100 401 2.44e-70 226
MS.gene54078.t1 AT1G10880 42.414 290 140 6 92 377 113 379 4.83e-70 225
MS.gene54078.t1 AT1G68380 36.761 389 185 11 15 379 36 387 8.20e-66 214
MS.gene54078.t1 AT1G51770 37.888 322 147 7 59 377 87 358 5.91e-58 193
MS.gene54078.t1 AT5G14550 37.793 299 150 10 96 366 64 354 2.64e-54 184
MS.gene54078.t1 AT5G14550 37.793 299 150 10 96 366 64 354 3.86e-54 183
MS.gene54078.t1 AT5G14550 40.873 252 123 9 96 328 64 308 7.84e-52 176
MS.gene54078.t1 AT1G11940 35.621 306 163 11 96 375 73 370 6.03e-49 170
MS.gene54078.t1 AT1G62305 36.000 300 151 11 96 366 68 355 1.18e-48 169
MS.gene54078.t1 AT5G25330 38.514 296 145 14 97 377 81 354 2.40e-48 168
MS.gene54078.t1 AT3G52060 34.694 294 151 10 96 377 74 338 8.85e-47 163
MS.gene54078.t1 AT5G14550 36.364 286 145 11 96 366 64 327 8.76e-43 152
MS.gene54078.t1 AT1G62305 38.679 212 108 5 96 289 68 275 1.77e-41 149
MS.gene54078.t1 AT3G21310 46.821 173 89 2 62 232 81 252 4.43e-41 146
MS.gene54078.t1 AT4G32290 34.650 329 183 10 64 377 60 371 1.18e-40 148
MS.gene54078.t1 AT5G22070 32.051 312 153 9 97 377 71 354 5.22e-40 145
MS.gene54078.t1 AT1G11940 41.011 178 96 4 96 267 73 247 7.95e-37 135
MS.gene54078.t1 AT1G62305 33.000 300 136 12 96 366 68 331 1.36e-35 134

Find 85 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACAAAATGTTGGTTATC+AGG 0.204352 1.2:-10199355 None:intergenic
ATCAATTTATCTTGAGTTTC+CGG 0.235833 1.2:-10201659 None:intergenic
ATTGCACCTTGCGAGTTAAA+TGG 0.295978 1.2:+10201596 MS.gene54078:CDS
GATGTCTCGTCCAACAAAAT+AGG 0.299048 1.2:-10198117 None:intergenic
TTGCGGTTTCCCTCCATATT+CGG 0.306368 1.2:-10200298 None:intergenic
TTAAATTTATCAGCCGAATA+TGG 0.312461 1.2:+10200285 MS.gene54078:intron
CCGAGATTCAGTCTCTTTAT+CGG 0.320366 1.2:-10197666 None:intergenic
CAAACTTAAAGAGGCCTACT+TGG 0.327146 1.2:+10197474 MS.gene54078:CDS
TTGATTGGTCCGAAGGAAAA+TGG 0.332260 1.2:+10200488 MS.gene54078:CDS
GAGTTTCCGGATAAAACTTC+CGG 0.336942 1.2:-10201646 None:intergenic
AATGGCATCCTAGGTCATTC+AGG 0.339509 1.2:+10200506 MS.gene54078:CDS
AACTTGGGGAAGAATTTCTA+TGG 0.357256 1.2:+10199291 MS.gene54078:CDS
ATAAATTCAAGCATCATTGC+AGG 0.386140 1.2:+10200114 MS.gene54078:CDS
ATGTCTCGTCCAACAAAATA+GGG 0.391447 1.2:-10198116 None:intergenic
ATCCAGGCGGAATCGCAAAT+TGG 0.399315 1.2:+10200452 MS.gene54078:CDS
TGAGGCGGAAAGGAGACTTT+TGG 0.402038 1.2:+10199315 MS.gene54078:CDS
GCTTGAATTTATTAAAATAG+AGG 0.405441 1.2:-10200103 None:intergenic
AAAACATAAAAGCAACTTTA+GGG 0.408320 1.2:-10197736 None:intergenic
TCAATTTCTTTCAGGTAACT+TGG 0.409545 1.2:+10199275 MS.gene54078:intron
GCTCTGGCATACATTCTTCC+AGG 0.421167 1.2:+10197787 MS.gene54078:CDS
CAATTTCTTTCAGGTAACTT+GGG 0.448407 1.2:+10199276 MS.gene54078:intron
GACCAATTTGCGATTCCGCC+TGG 0.448772 1.2:-10200454 None:intergenic
GGTGAATTCCCGAGTCTGTA+CGG 0.449505 1.2:-10197645 None:intergenic
GATACCGGTCCGCATGGAAA+TGG 0.453440 1.2:+10199836 MS.gene54078:CDS
TCTCAAGGTTGTAGTGTTGT+TGG 0.455242 1.2:+10197590 MS.gene54078:CDS
CAAGTGTCAGCTTTATTGAC+AGG 0.461823 1.2:+10199667 MS.gene54078:CDS
AGTTTCCGGATAAAACTTCC+GGG 0.462746 1.2:-10201645 None:intergenic
TGTTCTTTGTTTAACTCTCA+AGG 0.472432 1.2:+10197575 MS.gene54078:CDS
GGGAAGAATTTCTATGGTTG+AGG 0.477859 1.2:+10199297 MS.gene54078:CDS
CCGAAGGAAAATGGCATCCT+AGG 0.478726 1.2:+10200497 MS.gene54078:CDS
GACACAGATCAAACTTAAAG+AGG 0.482413 1.2:+10197465 MS.gene54078:CDS
TCCCGAGTCTGTACGGGTGG+TGG 0.487361 1.2:-10197638 None:intergenic
TACAGTGGTTCTCGATGAAA+CGG 0.498255 1.2:+10200051 MS.gene54078:intron
TATGTTTAGATGCTTGATCC+AGG 0.504214 1.2:+10200436 MS.gene54078:intron
GGTCGGTGACATATGTTGAT+TGG 0.514974 1.2:+10200473 MS.gene54078:CDS
GCAGCACGCTCTAATAGTTA+TGG 0.518271 1.2:+10200073 MS.gene54078:CDS
AGCCACCACCCGTACAGACT+CGG 0.518673 1.2:+10197636 MS.gene54078:CDS
ACGAGACATCCACAGTGAAC+CGG 0.526163 1.2:+10198130 MS.gene54078:CDS
ATGTAGTTGAATTCGAGAAA+AGG 0.526682 1.2:-10201685 None:intergenic
AAACTAATGCAGGGCCATGA+AGG 0.526685 1.2:+10198041 MS.gene54078:intron
ATACAAAATGTTGGTTATCA+GGG 0.528558 1.2:-10199354 None:intergenic
CAAGGTTGTAGTGTTGTTGG+TGG 0.530530 1.2:+10197593 MS.gene54078:CDS
CGATAAAGAGACTGAATCTC+GGG 0.531188 1.2:+10197667 MS.gene54078:CDS
GTATGCCAGAGCTTCTCAAA+AGG 0.532388 1.2:-10197776 None:intergenic
ACAAAATCAAAGCGGCGCAC+TGG 0.534914 1.2:-10199624 None:intergenic
GTTGCCTGAAGTAGAAAAGA+AGG 0.536747 1.2:+10199877 MS.gene54078:CDS
GATCTTGTTATCTATTTGCC+CGG 0.539473 1.2:+10201627 MS.gene54078:CDS
TTTGCATCACTTGTATAATG+TGG 0.541176 1.2:-10201435 None:intergenic
AAATAGGGGCTGACATGTAT+CGG 0.542436 1.2:-10198101 None:intergenic
GCCACCACCCGTACAGACTC+GGG 0.543889 1.2:+10197637 MS.gene54078:CDS
GTGAATTCCCGAGTCTGTAC+GGG 0.546668 1.2:-10197644 None:intergenic
TGTCTATGTACATGCATCAA+AGG 0.549613 1.2:+10198073 MS.gene54078:CDS
ATGGCATCCTAGGTCATTCA+GGG 0.550473 1.2:+10200507 MS.gene54078:CDS
TTCTCAAAAGGTAATGATCC+CGG 0.552277 1.2:-10197764 None:intergenic
CCTGCCATTTCCATGCGGAC+CGG 0.561360 1.2:-10199840 None:intergenic
CCGATAAAGAGACTGAATCT+CGG 0.567122 1.2:+10197666 MS.gene54078:CDS
TTTCTATGGTTGAGGCGGAA+AGG 0.568574 1.2:+10199305 MS.gene54078:CDS
ATTTATCAGCCGAATATGGA+GGG 0.569886 1.2:+10200289 MS.gene54078:intron
TTTGAGCCATTTAACTCGCA+AGG 0.572858 1.2:-10201602 None:intergenic
CCGGTCCGCATGGAAATGGC+AGG 0.574083 1.2:+10199840 MS.gene54078:CDS
AATTTCTTTCAGGTAACTTG+GGG 0.576412 1.2:+10199277 MS.gene54078:intron
ACATATGTTGATTGGTCCGA+AGG 0.578375 1.2:+10200481 MS.gene54078:CDS
CAGACAACAATACAAAATGT+TGG 0.582838 1.2:-10199363 None:intergenic
AAGAATTTCTATGGTTGAGG+CGG 0.595575 1.2:+10199300 MS.gene54078:CDS
ACATTATACAAGTGATGCAA+AGG 0.598519 1.2:+10201437 MS.gene54078:CDS
TAAATTCAAGCATCATTGCA+GGG 0.600918 1.2:+10200115 MS.gene54078:CDS
AATTTATCAGCCGAATATGG+AGG 0.605235 1.2:+10200288 MS.gene54078:intron
TCACGAGCCCTGAATGACCT+AGG 0.607827 1.2:-10200514 None:intergenic
CTGCTTATATTTATCCGCTG+CGG 0.609061 1.2:+10197537 MS.gene54078:CDS
ACTAAAACGATAATCCAAGT+AGG 0.618618 1.2:-10197488 None:intergenic
GCTCATCAGAATAGCAGTTG+CGG 0.627810 1.2:-10200315 None:intergenic
TTAAACAAAGAACACGTCGA+GGG 0.629738 1.2:-10197566 None:intergenic
AATTCCCGAGTCTGTACGGG+TGG 0.635893 1.2:-10197641 None:intergenic
GTACTATGCTGTTCAAAGCA+CGG 0.641245 1.2:+10197712 MS.gene54078:CDS
TATGTGGATACCGGTCCGCA+TGG 0.642514 1.2:+10199830 MS.gene54078:CDS
AGGCGGAATCGCAAATTGGT+CGG 0.649905 1.2:+10200456 MS.gene54078:CDS
TAAACAAAGAACACGTCGAG+GGG 0.662055 1.2:-10197565 None:intergenic
TGTCTCGTCCAACAAAATAG+GGG 0.669880 1.2:-10198115 None:intergenic
GTTTAGATGCTTGATCCAGG+CGG 0.670501 1.2:+10200439 MS.gene54078:intron
AAACAAAGAACACGTCGAGG+GGG 0.699297 1.2:-10197564 None:intergenic
ACATACCTGCCATTTCCATG+CGG 0.707617 1.2:-10199845 None:intergenic
TACCCCATACCGGTTCACTG+TGG 0.707943 1.2:-10198139 None:intergenic
ACATGTCTTACAGAGAACAG+TGG 0.711790 1.2:+10201571 MS.gene54078:intron
AGTTGTACACAAAATCAAAG+CGG 0.723003 1.2:-10199632 None:intergenic
GTTAAACAAAGAACACGTCG+AGG 0.732342 1.2:-10197567 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATATAATAAATGAAAA+AGG - chr1.2:10197882-10197901 None:intergenic 10.0%
!! TATTTATACTAGATAAAAAT+TGG - chr1.2:10200672-10200691 None:intergenic 10.0%
!! TTACTATTACTATTAATTAA+TGG + chr1.2:10200849-10200868 MS.gene54078:intron 10.0%
!! AAAAGCAATATTATAGAATA+TGG - chr1.2:10201510-10201529 None:intergenic 15.0%
!! AAATAAAAAAAAAAGCTATG+TGG + chr1.2:10199814-10199833 MS.gene54078:intron 15.0%
!!! TATTTTACTATTAAGGATTA+AGG - chr1.2:10198862-10198881 None:intergenic 15.0%
!! AAAAACATAAAAGCAACTTT+AGG - chr1.2:10197740-10197759 None:intergenic 20.0%
!! AAAAATATGCACTAAAAAAG+AGG - chr1.2:10201307-10201326 None:intergenic 20.0%
!! AAAACATAAAAGCAACTTTA+GGG - chr1.2:10197739-10197758 None:intergenic 20.0%
!! AATATTATAGAATATGGAAG+AGG - chr1.2:10201504-10201523 None:intergenic 20.0%
!! CAAGTAAAGTTCAAATAAAT+AGG - chr1.2:10198019-10198038 None:intergenic 20.0%
!! CGACTTATTATTAATTATCA+TGG - chr1.2:10198686-10198705 None:intergenic 20.0%
!! GCTTGAATTTATTAAAATAG+AGG - chr1.2:10200106-10200125 None:intergenic 20.0%
!! TAAACTCATGAAAAAAATAG+CGG + chr1.2:10200546-10200565 MS.gene54078:CDS 20.0%
!! TGATATTGATAAAAACTCAT+TGG + chr1.2:10199022-10199041 MS.gene54078:intron 20.0%
!! TGGAATATTGTAAATTAACA+AGG - chr1.2:10201347-10201366 None:intergenic 20.0%
!! TGGTAAAACAAACAAATATA+TGG + chr1.2:10201214-10201233 MS.gene54078:intron 20.0%
!! TTATCATTCTTAGCTTATAT+TGG - chr1.2:10198215-10198234 None:intergenic 20.0%
!!! AATATGAATGCAATTGTTTT+CGG - chr1.2:10198733-10198752 None:intergenic 20.0%
!!! ATATATACTAGCTCTTTATA+TGG + chr1.2:10198177-10198196 MS.gene54078:intron 20.0%
!!! ATTACGTTCAAAAGTATAAT+TGG + chr1.2:10200750-10200769 MS.gene54078:intron 20.0%
!!! CTTCAGCTTAATATTTTATT+AGG - chr1.2:10198590-10198609 None:intergenic 20.0%
!!! GTTTTGAAACAAAAACAAAA+TGG + chr1.2:10201194-10201213 MS.gene54078:intron 20.0%
!!! TTTTTCAATATACCATTGTA+TGG - chr1.2:10201138-10201157 None:intergenic 20.0%
! AAAAGGAACATACAATTGAA+CGG - chr1.2:10199589-10199608 None:intergenic 25.0%
! AAACCAAAAAAAATAGCACT+TGG - chr1.2:10197972-10197991 None:intergenic 25.0%
! AAATTAACAAGGTAAAGACA+AGG - chr1.2:10201336-10201355 None:intergenic 25.0%
! AACAACAAATTCAGTTATCT+AGG + chr1.2:10201264-10201283 MS.gene54078:intron 25.0%
! AATCAATTATGACAAAAGAC+GGG - chr1.2:10198656-10198675 None:intergenic 25.0%
! AATTAACAAGGTAAAGACAA+GGG - chr1.2:10201335-10201354 None:intergenic 25.0%
! ACAACAAATTCAGTTATCTA+GGG + chr1.2:10201265-10201284 MS.gene54078:intron 25.0%
! ACGTCTTCTTTCAAAATAAT+AGG + chr1.2:10197851-10197870 MS.gene54078:intron 25.0%
! ATCAATTTATCTTGAGTTTC+CGG - chr1.2:10201662-10201681 None:intergenic 25.0%
! ATTCTAACAATTCCATACAA+TGG + chr1.2:10201123-10201142 MS.gene54078:intron 25.0%
! CAATCAATTATGACAAAAGA+CGG - chr1.2:10198657-10198676 None:intergenic 25.0%
! CACTTATAAAGAGAAAAGAT+TGG - chr1.2:10200373-10200392 None:intergenic 25.0%
! TATAACCGACAATAATAACT+TGG - chr1.2:10200181-10200200 None:intergenic 25.0%
! TATCAAATGATCGAAATTTG+AGG + chr1.2:10198285-10198304 MS.gene54078:intron 25.0%
! TATCTAGTATAAATATCACC+AGG + chr1.2:10200677-10200696 MS.gene54078:intron 25.0%
! TATGTAGAATCTTCAATGAA+AGG - chr1.2:10199747-10199766 None:intergenic 25.0%
! TTAAATTTATCAGCCGAATA+TGG + chr1.2:10200285-10200304 MS.gene54078:intron 25.0%
! TTACTTGTAAAACTAATGCA+GGG + chr1.2:10198032-10198051 MS.gene54078:intron 25.0%
! TTCTCTTTATAAGTGATACA+GGG + chr1.2:10200378-10200397 MS.gene54078:intron 25.0%
! TTTACTTGTAAAACTAATGC+AGG + chr1.2:10198031-10198050 MS.gene54078:intron 25.0%
! TTTCTCTTTATAAGTGATAC+AGG + chr1.2:10200377-10200396 MS.gene54078:intron 25.0%
! TTTGTTCCATTGCTAAAATT+TGG + chr1.2:10199410-10199429 MS.gene54078:intron 25.0%
!! AATACAAAATGTTGGTTATC+AGG - chr1.2:10199358-10199377 None:intergenic 25.0%
!! ATACAAAATGTTGGTTATCA+GGG - chr1.2:10199357-10199376 None:intergenic 25.0%
!! ATTTTGTATTGTTGTCTGAT+AGG + chr1.2:10199368-10199387 MS.gene54078:CDS 25.0%
!! GATTTTCATCAAGATTGTTA+TGG - chr1.2:10200719-10200738 None:intergenic 25.0%
!! GTTCCTTAAAATTTTGTCAT+TGG + chr1.2:10199113-10199132 MS.gene54078:intron 25.0%
!! TCTCCAATGACAAAATTTTA+AGG - chr1.2:10199119-10199138 None:intergenic 25.0%
!! TTATTCATCTAATTTGTAGC+AGG - chr1.2:10199708-10199727 None:intergenic 25.0%
!! TTGTTACAAAAAGCATAGAA+AGG - chr1.2:10200244-10200263 None:intergenic 25.0%
!!! AGATCTCAATTTTTAGATCA+CGG - chr1.2:10201098-10201117 None:intergenic 25.0%
!!! CTAAAATTTGGTTGGTTTTT+GGG + chr1.2:10199422-10199441 MS.gene54078:intron 25.0%
!!! TTACCAAGTGCTATTTTTTT+TGG + chr1.2:10197966-10197985 MS.gene54078:intron 25.0%
AAAAAAAGCTATGTGGATAC+CGG + chr1.2:10199821-10199840 MS.gene54078:intron 30.0%
ACTAAAACGATAATCCAAGT+AGG - chr1.2:10197491-10197510 None:intergenic 30.0%
ACTAACTAACTAAGCTTACA+AGG - chr1.2:10200919-10200938 None:intergenic 30.0%
AGAGTGCAAAAACATTTGAA+GGG - chr1.2:10200596-10200615 None:intergenic 30.0%
AGTTGTACACAAAATCAAAG+CGG - chr1.2:10199501-10199520 None:intergenic 30.0%
ATAAATTCAAGCATCATTGC+AGG + chr1.2:10200114-10200133 MS.gene54078:CDS 30.0%
ATCATAAGCATTCTTTCAAC+AGG - chr1.2:10201536-10201555 None:intergenic 30.0%
ATGTAGTTGAATTCGAGAAA+AGG - chr1.2:10201688-10201707 None:intergenic 30.0%
ATTTGAGTGGATACATTACA+TGG - chr1.2:10199083-10199102 None:intergenic 30.0%
CAAATCTTAACCTCAATGAA+TGG - chr1.2:10199949-10199968 None:intergenic 30.0%
CAACAAATTCAGTTATCTAG+GGG + chr1.2:10201266-10201285 MS.gene54078:intron 30.0%
CAACTAAATCCAAAGAAACA+GGG - chr1.2:10198525-10198544 None:intergenic 30.0%
CAGACAACAATACAAAATGT+TGG - chr1.2:10199366-10199385 None:intergenic 30.0%
CATTCATTGAGGTTAAGATT+TGG + chr1.2:10199947-10199966 MS.gene54078:intron 30.0%
GAAAGAAATTGAAAACCAGT+TGG - chr1.2:10199267-10199286 None:intergenic 30.0%
GAAAGGAACATACAATTGAA+CGG - chr1.2:10199455-10199474 None:intergenic 30.0%
GATGCTTATTACTTGTAACT+GGG - chr1.2:10198440-10198459 None:intergenic 30.0%
GATTCTACATATCTGTTACA+TGG + chr1.2:10199756-10199775 MS.gene54078:intron 30.0%
GCACTTACATTAAAAAAGGT+TGG - chr1.2:10200349-10200368 None:intergenic 30.0%
GCTAAAGACAAATTCTTTGA+TGG - chr1.2:10200629-10200648 None:intergenic 30.0%
GCTAAGAATGATAAAGAATG+TGG + chr1.2:10198221-10198240 MS.gene54078:intron 30.0%
GGTTATAGCATCACAAATAA+TGG + chr1.2:10200194-10200213 MS.gene54078:intron 30.0%
TAAATTCAAGCATCATTGCA+GGG + chr1.2:10200115-10200134 MS.gene54078:CDS 30.0%
TAACCTCAATGAATGGTTTA+TGG - chr1.2:10199942-10199961 None:intergenic 30.0%
TAGTGACAATTTCATAGCTA+TGG + chr1.2:10198923-10198942 MS.gene54078:intron 30.0%
TCCTTATATATAGACCAACA+AGG - chr1.2:10201000-10201019 None:intergenic 30.0%
TGATGCTTATTACTTGTAAC+TGG - chr1.2:10198441-10198460 None:intergenic 30.0%
TGGTGCACTTACATTAAAAA+AGG - chr1.2:10200353-10200372 None:intergenic 30.0%
TTCCATTGCTAAAATTTGGT+TGG + chr1.2:10199414-10199433 MS.gene54078:intron 30.0%
TTTGAAGATAAAAGCTGTAC+TGG - chr1.2:10201367-10201386 None:intergenic 30.0%
! AAATCCTTCTTTTCTACTTC+AGG - chr1.2:10199884-10199903 None:intergenic 30.0%
! AAGAGTGCAAAAACATTTGA+AGG - chr1.2:10200597-10200616 None:intergenic 30.0%
! AATTTCTTTCAGGTAACTTG+GGG + chr1.2:10199277-10199296 MS.gene54078:intron 30.0%
! AGAAAAGAAGGATTTTCGAA+AGG + chr1.2:10199889-10199908 MS.gene54078:CDS 30.0%
! AGACAGAAAATTTTCCTTCA+TGG - chr1.2:10198058-10198077 None:intergenic 30.0%
! ATAAAAATTGGCTCTCTGAA+AGG - chr1.2:10200660-10200679 None:intergenic 30.0%
! CAATTTCTTTCAGGTAACTT+GGG + chr1.2:10199276-10199295 MS.gene54078:intron 30.0%
! GAAAAGAAGGATTTTCGAAA+GGG + chr1.2:10199890-10199909 MS.gene54078:CDS 30.0%
! TCAATTTCTTTCAGGTAACT+TGG + chr1.2:10199275-10199294 MS.gene54078:intron 30.0%
! TCATTCATTTTCCAAAGTGT+TGG - chr1.2:10198346-10198365 None:intergenic 30.0%
! TGTTCTTTGTTTAACTCTCA+AGG + chr1.2:10197575-10197594 MS.gene54078:CDS 30.0%
!! AACCAACCAAATTTTAGCAA+TGG - chr1.2:10199419-10199438 None:intergenic 30.0%
!! CATTCATTTTCCAAAGTGTT+GGG - chr1.2:10198345-10198364 None:intergenic 30.0%
!! GATCTCAATTTTTAGATCAC+GGG - chr1.2:10201097-10201116 None:intergenic 30.0%
!! GTTTTTGTTTCAAAACTACG+AGG - chr1.2:10201190-10201209 None:intergenic 30.0%
!! TATTTCACTTCCTCTAGTTT+TGG + chr1.2:10201469-10201488 MS.gene54078:intron 30.0%
!! TCTTCTTGTTTCTAATACAG+TGG + chr1.2:10200036-10200055 MS.gene54078:intron 30.0%
!! TGCTTTTATGTTTTTGACTC+CGG + chr1.2:10197745-10197764 MS.gene54078:CDS 30.0%
!!! ACTGGTTTTCAATTTCTTTC+AGG + chr1.2:10199267-10199286 MS.gene54078:intron 30.0%
!!! ATGCGTGATTTTTTGAATAG+TGG - chr1.2:10199224-10199243 None:intergenic 30.0%
!!! GCTAAAATTTGGTTGGTTTT+TGG + chr1.2:10199421-10199440 MS.gene54078:intron 30.0%
!!! GGTTTGCTGCATTTTATTTT+TGG + chr1.2:10198889-10198908 MS.gene54078:intron 30.0%
!!! TTTTTTCTGTTACAAGAGAG+AGG - chr1.2:10201030-10201049 None:intergenic 30.0%
AAAGTTCATCTAATCACGCA+AGG + chr1.2:10198613-10198632 MS.gene54078:intron 35.0%
AAATGAATGACTGTGTAAGG+CGG + chr1.2:10198356-10198375 MS.gene54078:intron 35.0%
AACGCATTTCAGTATTTGAG+TGG - chr1.2:10199096-10199115 None:intergenic 35.0%
AACTTGGGGAAGAATTTCTA+TGG + chr1.2:10199291-10199310 MS.gene54078:CDS 35.0%
AAGAATTTCTATGGTTGAGG+CGG + chr1.2:10199300-10199319 MS.gene54078:CDS 35.0%
AATTTATCAGCCGAATATGG+AGG + chr1.2:10200288-10200307 MS.gene54078:intron 35.0%
ATCTCGAATGGTGTTTCTTA+GGG + chr1.2:10198834-10198853 MS.gene54078:intron 35.0%
ATGTCTCGTCCAACAAAATA+GGG - chr1.2:10198119-10198138 None:intergenic 35.0%
ATTTATCAGCCGAATATGGA+GGG + chr1.2:10200289-10200308 MS.gene54078:intron 35.0%
CAACCATAAACCATTCATTG+AGG + chr1.2:10199936-10199955 MS.gene54078:intron 35.0%
CATGTCAGAAAAACTACCAT+TGG - chr1.2:10200003-10200022 None:intergenic 35.0%
CCAACTAAATCCAAAGAAAC+AGG - chr1.2:10198526-10198545 None:intergenic 35.0%
CTAAGCTTACAAGGATAACT+AGG - chr1.2:10200910-10200929 None:intergenic 35.0%
GAATAGGAATGTCATATACC+TGG - chr1.2:10197808-10197827 None:intergenic 35.0%
GACACAGATCAAACTTAAAG+AGG + chr1.2:10197465-10197484 MS.gene54078:CDS 35.0%
GCTGACCAAGTTATTATTGT+CGG + chr1.2:10200173-10200192 MS.gene54078:intron 35.0%
GGAAAATGAATGACTGTGTA+AGG + chr1.2:10198353-10198372 MS.gene54078:intron 35.0%
TATGCACTAAAAAAGAGGTC+CGG - chr1.2:10201302-10201321 None:intergenic 35.0%
TATGTTTAGATGCTTGATCC+AGG + chr1.2:10200436-10200455 MS.gene54078:intron 35.0%
TGTCTATGTACATGCATCAA+AGG + chr1.2:10198073-10198092 MS.gene54078:CDS 35.0%
TTAAACAAAGAACACGTCGA+GGG - chr1.2:10197569-10197588 None:intergenic 35.0%
TTCTCAAAAGGTAATGATCC+CGG - chr1.2:10197767-10197786 None:intergenic 35.0%
TTTGTTAACACCCAACACTT+TGG + chr1.2:10198332-10198351 MS.gene54078:intron 35.0%
! AAATCTAAGAGTGTGGTCTA+TGG - chr1.2:10197830-10197849 None:intergenic 35.0%
! CAGAAATTTCCCTGTTTCTT+TGG + chr1.2:10198513-10198532 MS.gene54078:intron 35.0%
! CCTGTTTCTTTGGATTTAGT+TGG + chr1.2:10198523-10198542 MS.gene54078:intron 35.0%
! GATCTTGTTATCTATTTGCC+CGG + chr1.2:10201627-10201646 MS.gene54078:CDS 35.0%
! GCCTTGTTGGTCTATATATA+AGG + chr1.2:10200996-10201015 MS.gene54078:intron 35.0%
!! CACAAGCATTGATATGAATG+AGG - chr1.2:10197933-10197952 None:intergenic 35.0%
!! GCTTTTATGTTTTTGACTCC+GGG + chr1.2:10197746-10197765 MS.gene54078:CDS 35.0%
!!! GGTTTTAATTTAATTCGCGC+AGG - chr1.2:10198487-10198506 None:intergenic 35.0%
!!! TTCCTCTAGTTTTGGTTCTA+AGG + chr1.2:10201477-10201496 MS.gene54078:intron 35.0%
AAACTCAGCAAGACTAACTG+AGG - chr1.2:10200958-10200977 None:intergenic 40.0%
AAATAGGGGCTGACATGTAT+CGG - chr1.2:10198104-10198123 None:intergenic 40.0%
ACAGGGAAATTTCTGCTCAA+AGG - chr1.2:10198508-10198527 None:intergenic 40.0%
ACATGTCTTACAGAGAACAG+TGG + chr1.2:10201571-10201590 MS.gene54078:intron 40.0%
AGACGTGAAATCTAAGAGTG+TGG - chr1.2:10197837-10197856 None:intergenic 40.0%
AGTTTCCGGATAAAACTTCC+GGG - chr1.2:10201648-10201667 None:intergenic 40.0%
ATACGCCAAACAAGTTAGCA+GGG - chr1.2:10200419-10200438 None:intergenic 40.0%
ATTGCACCTTGCGAGTTAAA+TGG + chr1.2:10201596-10201615 MS.gene54078:CDS 40.0%
CAAACTTAAAGAGGCCTACT+TGG + chr1.2:10197474-10197493 MS.gene54078:CDS 40.0%
CATCTCGAATGGTGTTTCTT+AGG + chr1.2:10198833-10198852 MS.gene54078:intron 40.0%
CCGAGATTCAGTCTCTTTAT+CGG - chr1.2:10197669-10197688 None:intergenic 40.0%
CCGATAAAGAGACTGAATCT+CGG + chr1.2:10197666-10197685 MS.gene54078:CDS 40.0%
CGATAAAGAGACTGAATCTC+GGG + chr1.2:10197667-10197686 MS.gene54078:CDS 40.0%
CTGCTTATATTTATCCGCTG+CGG + chr1.2:10197537-10197556 MS.gene54078:CDS 40.0%
GACCTTAGAACCAAAACTAG+AGG - chr1.2:10201482-10201501 None:intergenic 40.0%
GAGTTTCCGGATAAAACTTC+CGG - chr1.2:10201649-10201668 None:intergenic 40.0%
GATGTCTCGTCCAACAAAAT+AGG - chr1.2:10198120-10198139 None:intergenic 40.0%
GCTTACAAGGATAACTAGGA+AGG - chr1.2:10200906-10200925 None:intergenic 40.0%
GGGAAGAATTTCTATGGTTG+AGG + chr1.2:10199297-10199316 MS.gene54078:CDS 40.0%
GGTAGAATGTTTAGACTTCC+TGG - chr1.2:10200698-10200717 None:intergenic 40.0%
GGTATACAGCTGAAGCAAAA+AGG - chr1.2:10199606-10199625 None:intergenic 40.0%
GTACTATGCTGTTCAAAGCA+CGG + chr1.2:10197712-10197731 MS.gene54078:CDS 40.0%
GTTAAACAAAGAACACGTCG+AGG - chr1.2:10197570-10197589 None:intergenic 40.0%
GTTGCCTGAAGTAGAAAAGA+AGG + chr1.2:10199877-10199896 MS.gene54078:CDS 40.0%
TAAACAAAGAACACGTCGAG+GGG - chr1.2:10197568-10197587 None:intergenic 40.0%
TACAGTGGTTCTCGATGAAA+CGG + chr1.2:10200051-10200070 MS.gene54078:intron 40.0%
TAGTTGGAACTCGTTGAACT+AGG + chr1.2:10198539-10198558 MS.gene54078:intron 40.0%
TCTCAAGGTTGTAGTGTTGT+TGG + chr1.2:10197590-10197609 MS.gene54078:CDS 40.0%
TGTCCAATGTACGAAACCAA+TGG + chr1.2:10199984-10200003 MS.gene54078:intron 40.0%
TGTCTCGTCCAACAAAATAG+GGG - chr1.2:10198118-10198137 None:intergenic 40.0%
TTTGAGCCATTTAACTCGCA+AGG - chr1.2:10201605-10201624 None:intergenic 40.0%
! AAGAGTGTGGTCTATGGAAT+AGG - chr1.2:10197824-10197843 None:intergenic 40.0%
! ACATATGTTGATTGGTCCGA+AGG + chr1.2:10200481-10200500 MS.gene54078:CDS 40.0%
! TTGATTGGTCCGAAGGAAAA+TGG + chr1.2:10200488-10200507 MS.gene54078:CDS 40.0%
!! ATTTGCCCGGAAGTTTTATC+CGG + chr1.2:10201640-10201659 MS.gene54078:CDS 40.0%
!! CAAGTGTCAGCTTTATTGAC+AGG + chr1.2:10199667-10199686 MS.gene54078:CDS 40.0%
!! CATTACCTTTTGAGAAGCTC+TGG + chr1.2:10197771-10197790 MS.gene54078:CDS 40.0%
!! CTACCATTGGTTTCGTACAT+TGG - chr1.2:10199990-10200009 None:intergenic 40.0%
!! GCTTTGAAGAACATCTCGAA+TGG + chr1.2:10198822-10198841 MS.gene54078:intron 40.0%
AAAAAAGAGGTCCGGCTAAC+AGG - chr1.2:10201294-10201313 None:intergenic 45.0%
AAACAAAGAACACGTCGAGG+GGG - chr1.2:10197567-10197586 None:intergenic 45.0%
AAACTAATGCAGGGCCATGA+AGG + chr1.2:10198041-10198060 MS.gene54078:intron 45.0%
AATGGCATCCTAGGTCATTC+AGG + chr1.2:10200506-10200525 MS.gene54078:CDS 45.0%
ACAAAATCAAAGCGGCTCAC+TGG - chr1.2:10199493-10199512 None:intergenic 45.0%
ACAAGGCTAACTAACTACGC+TGG - chr1.2:10200983-10201002 None:intergenic 45.0%
AGATCACGGGATCATGAAGT+TGG - chr1.2:10201084-10201103 None:intergenic 45.0%
ATGGCATCCTAGGTCATTCA+GGG + chr1.2:10200507-10200526 MS.gene54078:CDS 45.0%
CATACGCCAAACAAGTTAGC+AGG - chr1.2:10200420-10200439 None:intergenic 45.0%
GCAGCACGCTCTAATAGTTA+TGG + chr1.2:10200073-10200092 MS.gene54078:CDS 45.0%
GCTCATCAGAATAGCAGTTG+CGG - chr1.2:10200318-10200337 None:intergenic 45.0%
GGTATACAGCTGAAGCAGAA+AGG - chr1.2:10199472-10199491 None:intergenic 45.0%
GGTCGGTGACATATGTTGAT+TGG + chr1.2:10200473-10200492 MS.gene54078:CDS 45.0%
GTATGCCAGAGCTTCTCAAA+AGG - chr1.2:10197779-10197798 None:intergenic 45.0%
GTTTAGATGCTTGATCCAGG+CGG + chr1.2:10200439-10200458 MS.gene54078:intron 45.0%
TCTTAGTAGCTAGTGCCAAC+TGG + chr1.2:10199249-10199268 MS.gene54078:intron 45.0%
TGATGAGCTATACCCCATAC+CGG - chr1.2:10198152-10198171 None:intergenic 45.0%
TTGCGGTTTCCCTCCATATT+CGG - chr1.2:10200301-10200320 None:intergenic 45.0%
TTTCTATGGTTGAGGCGGAA+AGG + chr1.2:10199305-10199324 MS.gene54078:CDS 45.0%
! ACATACCTGCCATTTCCATG+CGG - chr1.2:10199848-10199867 None:intergenic 45.0%
! ATCTAATCACGCAAGGCACT+AGG + chr1.2:10198620-10198639 MS.gene54078:intron 45.0%
! CAAGGTTGTAGTGTTGTTGG+TGG + chr1.2:10197593-10197612 MS.gene54078:CDS 45.0%
! CATGTCAGCCCCTATTTTGT+TGG + chr1.2:10198107-10198126 MS.gene54078:CDS 45.0%
! GGATTTTCGAAAGGGTTCAC+AGG + chr1.2:10199898-10199917 MS.gene54078:CDS 45.0%
! TCTAATCACGCAAGGCACTA+GGG + chr1.2:10198621-10198640 MS.gene54078:intron 45.0%
!! GCGTAGTTAGTTAGCCTTGT+TGG + chr1.2:10200983-10201002 MS.gene54078:intron 45.0%
!! TCTCTCCCTGCTAACTTGTT+TGG + chr1.2:10200411-10200430 MS.gene54078:intron 45.0%
!!! CCTAGGATGCCATTTTCCTT+CGG - chr1.2:10200500-10200519 None:intergenic 45.0%
!! ACATAAAAATAAATAAATAA+AGG + chr1.2:10199177-10199196 MS.gene54078:intron 5.0%
!!! AAAATTATATTTTACTATTA+AGG - chr1.2:10198869-10198888 None:intergenic 5.0%
!!! TTAATAGTAAAATATAATTT+TGG + chr1.2:10198868-10198887 MS.gene54078:intron 5.0%
ACAAAATCAAAGCGGCGCAC+TGG - chr1.2:10199627-10199646 None:intergenic 50.0%
ACATCCACAGTGAACCGGTA+TGG + chr1.2:10198135-10198154 MS.gene54078:intron 50.0%
ACGAGACATCCACAGTGAAC+CGG + chr1.2:10198130-10198149 MS.gene54078:CDS 50.0%
AGGCGGAATCGCAAATTGGT+CGG + chr1.2:10200456-10200475 MS.gene54078:CDS 50.0%
AGTTAGCAGGGAGAGAGAGA+TGG - chr1.2:10200407-10200426 None:intergenic 50.0%
ATCCACAGTGAACCGGTATG+GGG + chr1.2:10198137-10198156 MS.gene54078:intron 50.0%
ATCCAGGCGGAATCGCAAAT+TGG + chr1.2:10200452-10200471 MS.gene54078:CDS 50.0%
CATCCACAGTGAACCGGTAT+GGG + chr1.2:10198136-10198155 MS.gene54078:intron 50.0%
CCGAAGGAAAATGGCATCCT+AGG + chr1.2:10200497-10200516 MS.gene54078:CDS 50.0%
GCTCTGGCATACATTCTTCC+AGG + chr1.2:10197787-10197806 MS.gene54078:CDS 50.0%
GGTGAATTCCCGAGTCTGTA+CGG - chr1.2:10197648-10197667 None:intergenic 50.0%
GTGAATTCCCGAGTCTGTAC+GGG - chr1.2:10197647-10197666 None:intergenic 50.0%
! TGAGGCGGAAAGGAGACTTT+TGG + chr1.2:10199315-10199334 MS.gene54078:CDS 50.0%
AATTCCCGAGTCTGTACGGG+TGG - chr1.2:10197644-10197663 None:intergenic 55.0%
GACCAATTTGCGATTCCGCC+TGG - chr1.2:10200457-10200476 None:intergenic 55.0%
GATACCGGTCCGCATGGAAA+TGG + chr1.2:10199836-10199855 MS.gene54078:CDS 55.0%
TATGTGGATACCGGTCCGCA+TGG + chr1.2:10199830-10199849 MS.gene54078:CDS 55.0%
TCACGAGCCCTGAATGACCT+AGG - chr1.2:10200517-10200536 None:intergenic 55.0%
!! ATCTAGGGGCACCTGTTAGC+CGG + chr1.2:10201280-10201299 MS.gene54078:intron 55.0%
!! TACCCCATACCGGTTCACTG+TGG - chr1.2:10198142-10198161 None:intergenic 55.0%
AGCCACCACCCGTACAGACT+CGG + chr1.2:10197636-10197655 MS.gene54078:CDS 60.0%
! CCTGCCATTTCCATGCGGAC+CGG - chr1.2:10199843-10199862 None:intergenic 60.0%
CCGGTCCGCATGGAAATGGC+AGG + chr1.2:10199840-10199859 MS.gene54078:CDS 65.0%
GCCACCACCCGTACAGACTC+GGG + chr1.2:10197637-10197656 MS.gene54078:CDS 65.0%
TCCCGAGTCTGTACGGGTGG+TGG - chr1.2:10197641-10197660 None:intergenic 65.0%
GTCGAGGGGGAGCTCCGCAG+CGG - chr1.2:10197554-10197573 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 10197452 10201712 10197452 ID=MS.gene54078
chr1.2 mRNA 10197452 10201712 10197452 ID=MS.gene54078.t1;Parent=MS.gene54078
chr1.2 exon 10197452 10197808 10197452 ID=MS.gene54078.t1.exon1;Parent=MS.gene54078.t1
chr1.2 CDS 10197452 10197808 10197452 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10198053 10198151 10198053 ID=MS.gene54078.t1.exon2;Parent=MS.gene54078.t1
chr1.2 CDS 10198053 10198151 10198053 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10199289 10199389 10199289 ID=MS.gene54078.t1.exon3;Parent=MS.gene54078.t1
chr1.2 CDS 10199289 10199389 10199289 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10199617 10199688 10199617 ID=MS.gene54078.t1.exon4;Parent=MS.gene54078.t1
chr1.2 CDS 10199617 10199688 10199617 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10199829 10199919 10199829 ID=MS.gene54078.t1.exon5;Parent=MS.gene54078.t1
chr1.2 CDS 10199829 10199919 10199829 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10200056 10200136 10200056 ID=MS.gene54078.t1.exon6;Parent=MS.gene54078.t1
chr1.2 CDS 10200056 10200136 10200056 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10200298 10200360 10200298 ID=MS.gene54078.t1.exon7;Parent=MS.gene54078.t1
chr1.2 CDS 10200298 10200360 10200298 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10200445 10200567 10200445 ID=MS.gene54078.t1.exon8;Parent=MS.gene54078.t1
chr1.2 CDS 10200445 10200567 10200445 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10201420 10201458 10201420 ID=MS.gene54078.t1.exon9;Parent=MS.gene54078.t1
chr1.2 CDS 10201420 10201458 10201420 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
chr1.2 exon 10201584 10201712 10201584 ID=MS.gene54078.t1.exon10;Parent=MS.gene54078.t1
chr1.2 CDS 10201584 10201712 10201584 ID=cds.MS.gene54078.t1;Parent=MS.gene54078.t1
Gene Sequence

>MS.gene54078

ATGGTTGGATCAAGACACAGATCAAACTTAAAGAGGCCTACTTGGATTATCGTTTTAGTGTTCATAGTCTGCTTTTTTCTGATTGCTGCTTATATTTATCCGCTGCGGAGCTCCCCCTCGACGTGTTCTTTGTTTAACTCTCAAGGTTGTAGTGTTGTTGGTGGTGTTGATCGTACATTTAATAAGCCACCACCCGTACAGACTCGGGAATTCACCGATAAAGAGACTGAATCTCGGGTTGTTATTAACGAAATTCTTAAGTACTATGCTGTTCAAAGCACGGTCCCTAAAGTTGCTTTTATGTTTTTGACTCCGGGATCATTACCTTTTGAGAAGCTCTGGCATACATTCTTCCAGGTATATGACATTCCTATTCCATAGACCACACTCTTAGATTTCACGTCTTCTTTCAAAATAATAGGTGCTGCCTTTTTCATTTATTATATTGTTCTAGAACTAGTGATATTCTCATGCATTACCTCATTCATATCAATGCTTGTGATGCTGAATATAATTACCAAGTGCTATTTTTTTTGGTTTGAATGTGATAGAGATATGCTACTTCCTATTTATTTGAACTTTACTTGTAAAACTAATGCAGGGCCATGAAGGAAAATTTTCTGTCTATGTACATGCATCAAAGGAAAAACCGATACATGTCAGCCCCTATTTTGTTGGACGAGACATCCACAGTGAACCGGTATGGGGTATAGCTCATCATTTGAATATATACTAGCTCTTTATATGGCAGTTTCAAGTTCCAATATAAGCTAAGAATGATAAAGAATGTGGTCAATGCATATGATTTTTATGTGTAATTTTTATAAAACATTTATCAAATGATCGAAATTTGAGGACATTATCACAATAGTCTCATTATTTTGTTAACACCCAACACTTTGGAAAATGAATGACTGTGTAAGGCGGATAATATAGATAATAACATCTCAGTCATCATAACATTGTGTGTGTTGTGCAAATGTTACCCAGTTACAAGTAATAAGCATCAAGAAGTAGTGTATAAATATCAATCCTGCGCGAATTAAATTAAAACCTTTGAGCAGAAATTTCCCTGTTTCTTTGGATTTAGTTGGAACTCGTTGAACTAGGTATGTAGAAATAACTAGAACTAGATCCTAATAAAATATTAAGCTGAAGAGAAAAGTTCATCTAATCACGCAAGGCACTAGGGCTTTATTTTCCCGTCTTTTGTCATAATTGATTGAGTTTACCATGATAATTAATAATAAGTCGATTACTCTAATTATATTTAATTAACCGAAAACAATTGCATTCATATTATTTTGATTATTAAAGATACTTTATCTAACTCTCGTGCACTCAGATAATATCAATTAGATCGTGTTCAAGCTTTGAAGAACATCTCGAATGGTGTTTCTTAGGGTTCCTTAATCCTTAATAGTAAAATATAATTTTGGTTTGCTGCATTTTATTTTTGGTTTCATAAATTTAGTGACAATTTCATAGCTATGGAACATTAAGAGAGTTTCATAGAATTTAAATATTATTGTTTTGCATTTGATAGTGTAAAATTAGTAGAGAGAATATGTGATATTGATAAAAACTCATTGGAGTGAAAATTGCACGACTGTCATAAAATTTAGCTGCCATGTAATGTATCCACTCAAATACTGAAATGCGTTCCTTAAAATTTTGTCATTGGAGATGCTGCAGAAGTTTCGATATTAACATAAAAATAAATTAACATAAAAATAAATAAATAAAGGATTTGTAAACAGTGCACGTATCCACTATTCAAAAAATCACGCATCTTTTTCTTAGTAGCTAGTGCCAACTGGTTTTCAATTTCTTTCAGGTAACTTGGGGAAGAATTTCTATGGTTGAGGCGGAAAGGAGACTTTTGGCAAATGCACTTTTAGACCCTGATAACCAACATTTTGTATTGTTGTCTGATAGGTATTTTTGTTAAATTGTTCTTTGTTCCATTGCTAAAATTTGGTTGGTTTTTGGGATTTAATCCGTTCAATTGTATGTTCCTTTCTGCTTCAGCTGTATACCAGTGAGCCGCTTTGATTTTGTGTACAACTACTTGTTATTAACTAAATTGTTCTTTGTTCCATTGCTAAAATTTGGTTGGTTTTTGGGATTTAATCCGTTCAATTGTATGTTCCTTTTTGCTTCAGCTGTATACCAGTGCGCCGCTTTGATTTTGTGTACAACTACTTGTTATTAACAAGTGTCAGCTTTATTGACAGGTAAGAAATTATAGAACCTGCTACAAATTAGATGAATAAATTCTAGAAACTTTTTCCTTTCATTGAAGATTCTACATATCTGTTACATGGAAATTTGAACTAATCTGTCTTTTATTTTAAATTTTAAATAAAAAAAAAAGCTATGTGGATACCGGTCCGCATGGAAATGGCAGGTATGTAGAACGCATGTTGCCTGAAGTAGAAAAGAAGGATTTTCGAAAGGGTTCACAGGTATATTTTTAAAACACAACCATAAACCATTCATTGAGGTTAAGATTTGGATGAAAATTTGCTGTGTCCAATGTACGAAACCAATGGTAGTTTTTCTGACATGCATCTGAATTGAATCTTCTTGTTTCTAATACAGTGGTTCTCGATGAAACGGCAGCACGCTCTAATAGTTATGGCAGACAGCCTCTATTTTAATAAATTCAAGCATCATTGCAGGGTACTATGTTACTAATAATCACTTGTGCTTTTTCTTGCTGACCAAGTTATTATTGTCGGTTATAGCATCACAAATAATGGTTTCGTTAATTATCTACATTTTTTCCTTTCTATGCTTTTTGTAACAATTGTTTGACGAAAGAAATGTTTTAAATTTATCAGCCGAATATGGAGGGAAACCGCAACTGCTATTCTGATGAGCATTACTTGCCAACCTTTTTTAATGTAAGTGCACCAATCTTTTCTCTTTATAAGTGATACAGGGTAGCCATCTCTCTCTCCCTGCTAACTTGTTTGGCGTATGTTTAGATGCTTGATCCAGGCGGAATCGCAAATTGGTCGGTGACATATGTTGATTGGTCCGAAGGAAAATGGCATCCTAGGTCATTCAGGGCTCGTGATATTACTTATAAACTCATGAAAAAAATAGCGGTATGTGACACATTTTACTCTCTTTCCCTTCAAATGTTTTTGCACTCTTTACGACGAACCATCAAAGAATTTGTCTTTAGCATTTTTTTCCTTTCAGAGAGCCAATTTTTATCTAGTATAAATATCACCAGGAAGTCTAAACATTCTACCATAACAATCTTGATGAAAATCAAATGTTATTGATTACGTTCAAAAGTATAATTGGAAAAAACGTAAAATCTTGTATTGCTAAAGCAAATTGAAGTTTGTTGATACAAACAATGAAAATCAAATGTTATTAATTACTATTACTATTAATTAATGGATTGTTTCTACTAATCTTCAGTTAGTTGAAACCTTCCTAGTTATCCTTGTAAGCTTAGTTAGTTAGTCTATATTTGTAACTAACCTCAGTTAGTCTTGCTGAGTTTAACCAGCGTAGTTAGTTAGCCTTGTTGGTCTATATATAAGGAAGCTTAGCCTCTCTCTTGTAACAGAAAAAACAGAATTTATCAATTCAGATACACTTTCTCTCCAACTTCATGATCCCGTGATCTAAAAATTGAGATCTGCAGAATTCTAACAATTCCATACAATGGTATATTGAAAAAAAGTTAACAACATCTTGTATTTTTGAAAACCTCGTAGTTTTGAAACAAAAACAAAATGGTAAAACAAACAAATATATGGTACATGAGCATGTATTAAAACTTTAGCAACAACAAATTCAGTTATCTAGGGGCACCTGTTAGCCGGACCTCTTTTTTAGTGCATATTTTTTTTTTCCCTTGTCTTTACCTTGTTAATTTACAATATTCCAGTACAGCTTTTATCTTCAAATTCTTCTTAATGACACATTTTTATTCACTGCAGTACATTGATGAAAGTCCACATTATACAAGTGATGCAAAGGTGTGTAATATATTTCACTTCCTCTAGTTTTGGTTCTAAGGTCCTCTTCCATATTCTATAATATTGCTTTTATTCCTGTTGAAAGAATGCTTATGATTTTGTTATCATTTTCACATGTCTTACAGAGAACAGTGGTGATTGCACCTTGCGAGTTAAATGGCTCAAAACGATCTTGTTATCTATTTGCCCGGAAGTTTTATCCGGAAACTCAAGATAAATTGATTCACCTTTTCTCGAATTCAACTACATTCTAA
Protein sequence

>MS.gene54078.t1

MVGSRHRSNLKRPTWIIVLVFIVCFFLIAAYIYPLRSSPSTCSLFNSQGCSVVGGVDRTFNKPPPVQTREFTDKETESRVVINEILKYYAVQSTVPKVAFMFLTPGSLPFEKLWHTFFQGHEGKFSVYVHASKEKPIHVSPYFVGRDIHSEPVTWGRISMVEAERRLLANALLDPDNQHFVLLSDSCIPVRRFDFVYNYLLLTSVSFIDSYVDTGPHGNGRYVERMLPEVEKKDFRKGSQWFSMKRQHALIVMADSLYFNKFKHHCRPNMEGNRNCYSDEHYLPTFFNMLDPGGIANWSVTYVDWSEGKWHPRSFRARDITYKLMKKIAYIDESPHYTSDAKRTVVIAPCELNGSKRSCYLFARKFYPETQDKLIHLFSNSTTF