AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54516

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54516.t1 MTR_7g007780 99.237 917 7 0 1 917 1 917 0.0 1829
MS.gene54516.t1 MTR_7g007780 99.114 677 6 0 1 677 1 677 0.0 1352
MS.gene54516.t1 MTR_7g007780 36.122 263 109 7 528 736 394 651 1.10e-22 104
MS.gene54516.t1 MTR_3g466220 35.789 190 115 3 570 758 567 750 1.37e-19 94.7
MS.gene54516.t1 MTR_3g466220 32.642 193 118 5 500 692 584 764 7.02e-15 79.7
MS.gene54516.t1 MTR_3g466220 32.301 226 143 5 427 651 593 809 4.05e-13 73.9
MS.gene54516.t1 MTR_5g005940 29.677 310 191 9 447 736 69 371 1.43e-19 94.7
MS.gene54516.t1 MTR_5g005940 29.677 310 191 9 447 736 69 371 1.73e-19 94.0
MS.gene54516.t1 MTR_3g466220 35.789 190 115 3 570 758 546 729 1.86e-19 94.4
MS.gene54516.t1 MTR_3g466220 32.642 193 118 5 500 692 563 743 1.02e-14 79.3
MS.gene54516.t1 MTR_3g466220 32.301 226 143 5 427 651 572 788 5.76e-13 73.6
MS.gene54516.t1 MTR_1g104870 28.846 312 193 9 447 737 72 375 1.92e-16 84.7
MS.gene54516.t1 MTR_1g069845 32.520 246 153 7 464 708 476 709 3.26e-16 84.0
MS.gene54516.t1 MTR_1g069845 30.116 259 161 5 383 641 485 723 5.23e-16 83.2
MS.gene54516.t1 MTR_1g069845 32.461 191 122 3 570 759 454 638 4.52e-15 80.1
MS.gene54516.t1 MTR_1g069845 32.105 190 116 5 549 736 476 654 2.28e-13 74.7
MS.gene54516.t1 MTR_1g069845 32.520 246 153 7 464 708 480 713 4.17e-16 83.6
MS.gene54516.t1 MTR_1g069845 30.116 259 161 5 383 641 489 727 7.04e-16 82.8
MS.gene54516.t1 MTR_1g069845 32.461 191 122 3 570 759 458 642 5.68e-15 79.7
MS.gene54516.t1 MTR_1g069845 32.105 190 116 5 549 736 480 658 2.63e-13 74.3
MS.gene54516.t1 MTR_1g069845 32.520 246 153 7 464 708 359 592 1.11e-15 82.0
MS.gene54516.t1 MTR_1g069845 30.888 259 158 6 383 640 368 606 1.71e-15 81.3
MS.gene54516.t1 MTR_1g069845 32.461 191 122 3 570 759 337 521 1.01e-14 79.0
MS.gene54516.t1 MTR_1g069845 32.105 190 116 5 549 736 359 537 5.02e-13 73.2
MS.gene54516.t1 MTR_7g094900 28.939 311 192 11 442 733 77 377 1.40e-15 81.6
MS.gene54516.t1 MTR_7g097020 30.714 280 177 6 372 650 474 737 3.08e-15 80.9
MS.gene54516.t1 MTR_7g097020 31.707 205 126 5 555 757 525 717 5.91e-15 79.7
MS.gene54516.t1 MTR_7g097020 32.620 187 119 3 574 759 500 680 3.37e-14 77.4
MS.gene54516.t1 MTR_7g094910 28.197 305 191 10 451 736 66 361 8.25e-15 79.3
MS.gene54516.t1 MTR_7g094910 28.197 305 191 10 451 736 66 361 1.15e-14 78.6
MS.gene54516.t1 MTR_4g485520 28.272 191 133 2 551 741 366 552 3.83e-13 73.9
MS.gene54516.t1 MTR_4g485520 27.778 252 164 6 464 711 409 646 2.27e-11 68.2
MS.gene54516.t1 MTR_4g485520 28.272 191 133 2 551 741 198 384 4.49e-13 73.2
MS.gene54516.t1 MTR_4g485520 27.778 252 164 6 464 711 241 478 1.77e-11 68.2
MS.gene54516.t1 MTR_7g059405 33.742 163 102 2 571 733 376 532 1.84e-12 71.6
MS.gene54516.t1 MTR_1g018180 33.333 171 108 2 571 741 76 240 2.24e-12 70.1
MS.gene54516.t1 MTR_7g078330 28.395 162 113 1 572 733 380 538 2.33e-12 71.2
MS.gene54516.t1 MTR_5g083030 34.337 166 101 5 570 733 419 578 3.56e-12 70.9
MS.gene54516.t1 MTR_7g075060 29.185 233 154 5 428 653 631 859 4.16e-12 70.9
MS.gene54516.t1 MTR_4g063800 31.169 154 103 1 588 741 382 532 8.55e-12 69.3
MS.gene54516.t1 MTR_2g026130 32.444 225 140 6 511 732 171 386 1.15e-11 68.6
MS.gene54516.t1 MTR_3g088895 26.115 314 157 11 29 279 29 330 5.22e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54516.t1 AT2G44900 73.712 932 228 10 1 917 1 930 0.0 1328
MS.gene54516.t1 AT2G44900 73.712 932 228 10 1 917 1 930 0.0 1328
MS.gene54516.t1 AT3G60350 72.113 918 250 4 1 914 1 916 0.0 1283
MS.gene54516.t1 AT3G60350 72.113 918 250 4 1 914 1 916 0.0 1283
MS.gene54516.t1 AT2G23140 35.450 189 115 3 570 757 560 742 1.54e-19 94.7
MS.gene54516.t1 AT2G23140 30.116 259 167 6 500 757 577 822 2.87e-17 87.4
MS.gene54516.t1 AT2G23140 30.686 277 175 6 376 651 542 802 4.93e-16 83.6
MS.gene54516.t1 AT2G23140 35.450 189 115 3 570 757 557 739 1.60e-19 94.7
MS.gene54516.t1 AT2G23140 30.116 259 167 6 500 757 574 819 2.83e-17 87.4
MS.gene54516.t1 AT2G23140 30.686 277 175 6 376 651 539 799 4.88e-16 83.6
MS.gene54516.t1 AT2G23140 35.450 189 115 3 570 757 557 739 1.60e-19 94.7
MS.gene54516.t1 AT2G23140 30.116 259 167 6 500 757 574 819 2.83e-17 87.4
MS.gene54516.t1 AT2G23140 30.686 277 175 6 376 651 539 799 4.88e-16 83.6
MS.gene54516.t1 AT2G23140 35.450 189 115 3 570 757 368 550 4.81e-19 92.8
MS.gene54516.t1 AT2G23140 30.709 254 162 6 505 757 390 630 1.15e-16 85.1
MS.gene54516.t1 AT2G23140 30.686 277 175 6 376 651 350 610 1.27e-15 81.6
MS.gene54516.t1 AT2G23140 35.450 189 115 3 570 757 368 550 4.81e-19 92.8
MS.gene54516.t1 AT2G23140 30.709 254 162 6 505 757 390 630 1.15e-16 85.1
MS.gene54516.t1 AT2G23140 30.686 277 175 6 376 651 350 610 1.27e-15 81.6
MS.gene54516.t1 AT5G67340 28.099 242 162 5 500 740 454 684 7.12e-15 79.7
MS.gene54516.t1 AT5G67340 30.961 281 170 9 376 651 419 680 2.74e-14 77.8
MS.gene54516.t1 AT5G67340 31.273 275 164 9 429 695 423 680 1.27e-13 75.5
MS.gene54516.t1 AT5G67340 30.058 173 118 2 587 758 451 621 1.05e-12 72.4
MS.gene54516.t1 AT5G67340 28.099 242 162 5 500 740 454 684 7.12e-15 79.7
MS.gene54516.t1 AT5G67340 30.961 281 170 9 376 651 419 680 2.74e-14 77.8
MS.gene54516.t1 AT5G67340 31.273 275 164 9 429 695 423 680 1.27e-13 75.5
MS.gene54516.t1 AT5G67340 30.058 173 118 2 587 758 451 621 1.05e-12 72.4
MS.gene54516.t1 AT3G01400 32.418 182 113 3 571 748 80 255 2.55e-13 73.2
MS.gene54516.t1 AT5G13060 28.065 310 192 12 446 733 100 400 3.69e-13 73.9
MS.gene54516.t1 AT5G13060 27.246 334 197 9 447 744 203 526 2.67e-12 71.2
MS.gene54516.t1 AT5G42340 28.846 156 108 1 572 727 394 546 3.88e-13 73.9
MS.gene54516.t1 AT3G46510 30.168 179 120 2 588 766 383 556 4.98e-13 73.6
MS.gene54516.t1 AT5G19330 27.811 338 203 12 413 717 28 357 6.88e-13 73.2
MS.gene54516.t1 AT3G54790 30.742 283 180 10 429 708 475 744 8.07e-13 73.2
MS.gene54516.t1 AT3G54790 30.742 283 180 10 429 708 475 744 8.07e-13 73.2
MS.gene54516.t1 AT5G58680 33.742 163 102 2 571 733 78 234 1.64e-12 70.5
MS.gene54516.t1 AT1G23030 31.138 167 112 1 572 738 346 509 2.03e-12 71.6
MS.gene54516.t1 AT3G54790 30.742 283 180 10 429 708 439 708 2.04e-12 71.6
MS.gene54516.t1 AT5G62560 33.544 158 101 2 601 757 278 432 2.13e-12 71.2
MS.gene54516.t1 AT1G71020 31.250 192 125 4 551 740 188 374 3.55e-12 70.5
MS.gene54516.t1 AT4G16490 28.808 302 203 5 511 810 181 472 4.09e-12 70.1
MS.gene54516.t1 AT1G71020 32.308 195 124 5 551 742 336 525 6.47e-12 69.7
MS.gene54516.t1 AT1G12430 28.151 238 151 5 428 653 661 890 7.26e-12 70.1
MS.gene54516.t1 AT5G19330 30.041 243 153 8 484 717 124 358 9.80e-12 69.3
MS.gene54516.t1 AT3G47820 35.714 140 86 2 601 739 249 385 1.19e-11 68.9
MS.gene54516.t1 AT1G01950 28.448 232 157 5 428 653 658 886 1.20e-11 69.3
MS.gene54516.t1 AT3G54850 30.072 276 172 8 412 685 337 593 1.49e-11 68.6
MS.gene54516.t1 AT1G01950 28.448 232 157 5 428 653 637 865 1.93e-11 68.6
MS.gene54516.t1 AT1G12430 27.848 237 152 6 428 653 661 889 1.95e-11 68.6
MS.gene54516.t1 AT1G01950 28.448 232 157 5 428 653 620 848 2.08e-11 68.6
MS.gene54516.t1 AT1G01950 28.448 232 157 5 428 653 496 724 2.20e-11 68.2

Find 225 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCACCTCGTCTTGAATTTC+CGG 0.200987 7.4:-91185119 None:intergenic
TCAAGACGAGGTGGCGGATT+TGG 0.245334 7.4:+91185127 MS.gene54516:CDS
CAGCAGAACGCAAAAGTATA+TGG 0.257224 7.4:-91186123 None:intergenic
TTGGCCTTGCAAAATCTTAC+AGG 0.257297 7.4:+91186353 MS.gene54516:CDS
TGTCCAAAGTTAACTGATAT+CGG 0.259210 7.4:+91185662 MS.gene54516:CDS
AGGGAGGTCTTGATAATTTC+TGG 0.261341 7.4:+91186158 MS.gene54516:CDS
AGCCGGTGCATTGGCTAATT+TGG 0.264614 7.4:+91187299 MS.gene54516:CDS
AGAGGGCTGCTGGTGCTCTA+TGG 0.285448 7.4:+91189576 MS.gene54516:CDS
TCCGTGTTTGTGGAGTTCTT+TGG 0.294608 7.4:+91185280 MS.gene54516:CDS
AAGAGGCTGCTGGAGGATTA+TGG 0.296566 7.4:+91186976 MS.gene54516:CDS
AAATAAGCGGTGACGGTTGC+AGG 0.309899 7.4:+91185438 MS.gene54516:CDS
TCTAAAAGTGTGGGCTTAGA+TGG 0.311586 7.4:+91195053 MS.gene54516:CDS
CTATCACAGTTTACAATTCC+CGG 0.324291 7.4:+91196224 MS.gene54516:intron
GTGTTTCAGAGCCATTCTTC+TGG 0.327454 7.4:-91195078 None:intergenic
AACTCAGGCTCTCGGGCATC+AGG 0.337633 7.4:+91185600 MS.gene54516:CDS
GTTCGTTTCCTTTCTGTTGC+GGG 0.339182 7.4:+91185737 MS.gene54516:CDS
TGTAAGACATGGAGGGTTCT+AGG 0.344236 7.4:+91185251 MS.gene54516:CDS
AATTGAGATCCTTGCTAGTT+TGG 0.348393 7.4:+91186926 MS.gene54516:CDS
GGTGGCATACGCCTCCTTCT+TGG 0.356756 7.4:+91186334 MS.gene54516:CDS
TTCTGCTGAGAGCCCTCAAC+AGG 0.357677 7.4:+91186138 MS.gene54516:CDS
CTTTCTGCATGAGGCTGGCA+TGG 0.367297 7.4:-91196265 None:intergenic
CCACCTCGTCTTGAATTTCC+GGG 0.372970 7.4:-91185118 None:intergenic
AACTCATACCTTGGCTTGAA+TGG 0.381966 7.4:+91186092 MS.gene54516:CDS
GCTTTGGCCTACATGTTTGA+TGG 0.382480 7.4:+91194444 MS.gene54516:CDS
ATTTATGGCAGCACTGGCTT+TGG 0.385965 7.4:+91194428 MS.gene54516:CDS
TGGAATCTTGCTTTCAATCC+TGG 0.390367 7.4:+91194324 MS.gene54516:CDS
CTTCAGAAGCTTAGGTTTCG+TGG 0.392300 7.4:+91185365 MS.gene54516:CDS
ACCACATTCCACTTCATACT+TGG 0.399295 7.4:-91185764 None:intergenic
TTCAAAGACTTACAATGATA+AGG 0.402877 7.4:+91186060 MS.gene54516:CDS
GAGTTCTCAAGAGGATGTTC+AGG 0.405172 7.4:+91186219 MS.gene54516:CDS
CTTTCCTCTATTTATATTGT+CGG 0.407249 7.4:-91186014 None:intergenic
ACCTGCTTTCTGCATGAGGC+TGG 0.408674 7.4:-91196270 None:intergenic
GTGTGCATCTTCAGAAGCTT+AGG 0.411198 7.4:+91185357 MS.gene54516:CDS
AAGCTGGAGGAGTTGTTGAT+TGG 0.411218 7.4:+91185150 MS.gene54516:CDS
AAAAGCTAGTCTCTTCTTCA+AGG 0.417148 7.4:-91185916 None:intergenic
GCCCTCTTCTGCAACCGCCT+TGG 0.424856 7.4:-91186901 None:intergenic
TGGTAATGCTTTACGAATAG+TGG 0.425271 7.4:+91194344 MS.gene54516:CDS
AAACGGCTGCAGGAGCGTTA+TGG 0.427721 7.4:+91194304 MS.gene54516:CDS
CTTGGCTACATTGGCATTCA+CGG 0.429005 7.4:-91186883 None:intergenic
GGGAGGTCTTGATAATTTCT+GGG 0.432164 7.4:+91186159 MS.gene54516:CDS
AGCTGGTGGAGTTCAAGCTT+TGG 0.432636 7.4:+91189145 MS.gene54516:CDS
ATATTCAAGTGGTCTTCTAC+TGG 0.435078 7.4:+91187156 MS.gene54516:CDS
AGTACAGAGGTTGCTTTAGC+AGG 0.436400 7.4:+91187339 MS.gene54516:CDS
GAGGGCTGCTGGTGCTCTAT+GGG 0.437956 7.4:+91189577 MS.gene54516:CDS
AGCCTGAGTTTCATCAAACT+TGG 0.438776 7.4:-91185587 None:intergenic
GTGCACAGCGTGTCGTCCAC+CGG 0.440292 7.4:-91196243 None:intergenic
GTAACCTGTGCTAGTGCTGC+AGG 0.445306 7.4:-91195167 None:intergenic
ACATCTAATCCGATCAGGTT+AGG 0.447789 7.4:-91185803 None:intergenic
GATGTTTCAAGAACTGATAT+CGG 0.454445 7.4:+91185821 MS.gene54516:CDS
GGCACGATTTATGGCAGCAC+TGG 0.454750 7.4:+91194422 MS.gene54516:CDS
GCCAGCCTCATGCAGAAAGC+AGG 0.458060 7.4:+91196269 MS.gene54516:CDS
TGCAACCGCCTTGGCTACAT+TGG 0.461385 7.4:-91186892 None:intergenic
TCAAAGACTTACAATGATAA+GGG 0.461471 7.4:+91186061 MS.gene54516:CDS
CGAGAGGCCATTGCAGCAGC+TGG 0.461548 7.4:+91189128 MS.gene54516:CDS
CTGCACCTGCTTTCTGCATG+AGG 0.462938 7.4:-91196274 None:intergenic
TGTCAGTTTCTGAAGCCAAC+AGG 0.462984 7.4:+91189603 MS.gene54516:CDS
CGCTCGTCACTGCAAATTCG+AGG 0.465149 7.4:+91187386 MS.gene54516:CDS
CTTTGGCCTACATGTTTGAT+GGG 0.465851 7.4:+91194445 MS.gene54516:CDS
AGCTGAATTACTGTATCATC+AGG 0.466586 7.4:-91185182 None:intergenic
CCACTTTCCTCCTCACTCTA+CGG 0.467553 7.4:-91185061 None:intergenic
AACTCCACCAGCTGCTGCAA+TGG 0.467663 7.4:-91189135 None:intergenic
GTTCTGCCCATGAGGGTGTC+AGG 0.471178 7.4:+91188252 MS.gene54516:CDS
GGACTTCAAGAGAGGGCTGC+TGG 0.471783 7.4:+91189566 MS.gene54516:CDS
GTCCAAAGTTAACTGATATC+GGG 0.474491 7.4:+91185663 MS.gene54516:CDS
GAAGCTTAGGTTTCGTGGCG+CGG 0.475508 7.4:+91185370 MS.gene54516:CDS
TTGAAACATCTAATCCGATC+AGG 0.476499 7.4:-91185808 None:intergenic
TAGGTAACTCTCCGTGTTTG+TGG 0.477053 7.4:+91185270 MS.gene54516:CDS
GAGGTGGCGGATTTGGAAGC+TGG 0.477381 7.4:+91185134 MS.gene54516:CDS
GCAATCAAAACCCTCAAACT+TGG 0.477442 7.4:-91185878 None:intergenic
CAGCTGCTGCAATGGCCTCT+CGG 0.479286 7.4:-91189127 None:intergenic
TATCCTCATCACCAAGTTTG+AGG 0.480299 7.4:+91185867 MS.gene54516:CDS
AGCAAGTGAAGCTGCAACAT+TGG 0.481223 7.4:-91185327 None:intergenic
AACCCGATATCAGTTAACTT+TGG 0.481311 7.4:-91185665 None:intergenic
CTGGAGGAGTTGTTGATTGG+AGG 0.482094 7.4:+91185153 MS.gene54516:CDS
ATCCTCATCACCAAGTTTGA+GGG 0.482961 7.4:+91185868 MS.gene54516:CDS
TGGTGGAGTACAAGCTTTAG+TGG 0.484189 7.4:+91187128 MS.gene54516:CDS
TAGGGTGCCATTGCGGAAGC+TGG 0.484949 7.4:+91187108 MS.gene54516:intron
TGCAGCATTTGCTCTACTCC+AGG 0.488812 7.4:+91195950 MS.gene54516:CDS
GGATTATGGAATCTCTCTGT+TGG 0.489400 7.4:+91186990 MS.gene54516:CDS
AAAATAAATTACCTCCGCTT+CGG 0.489578 7.4:-91193424 None:intergenic
AGCAGAACGCAAAAGTATAT+GGG 0.489774 7.4:-91186122 None:intergenic
TTCTTCAGTGGTGCTGAAGT+TGG 0.496192 7.4:+91195879 MS.gene54516:intron
TTCTATAGGCAAGAAGCTGC+TGG 0.498021 7.4:+91189071 MS.gene54516:intron
TGCATTGGGAAATGTGCAAT+CGG 0.498709 7.4:+91185715 MS.gene54516:CDS
GGCTAGGTCAATGAACAAAC+TGG 0.500144 7.4:+91186947 MS.gene54516:CDS
GGTTCGTTTCCTTTCTGTTG+CGG 0.502160 7.4:+91185736 MS.gene54516:CDS
ATGGATGAATTTGCTTTAGT+CGG 0.502695 7.4:+91195011 MS.gene54516:CDS
TTGGCAAATTTAGCTGCTCA+TGG 0.502963 7.4:+91188158 MS.gene54516:CDS
ACACTAGGCTGCTCGTGCAT+TGG 0.504597 7.4:+91188139 MS.gene54516:intron
TCCTGTTCTAATGCTTCCGC+TGG 0.505626 7.4:+91189545 MS.gene54516:CDS
TCCAGCGGAAGCATTAGAAC+AGG 0.505801 7.4:-91189546 None:intergenic
TTACTTGAGAGTCTTGTGCT+TGG 0.506161 7.4:+91185506 MS.gene54516:CDS
GGAACGTGCAGCCGGTGCAT+TGG 0.507712 7.4:+91187290 MS.gene54516:intron
TGTTTGCTCAGCATTGCCAT+TGG 0.512065 7.4:+91193360 MS.gene54516:intron
CTTCCAGGATGTTCATGAAA+CGG 0.514447 7.4:+91194287 MS.gene54516:intron
TTCGAGAGGCGCAGTTGCTG+CGG 0.515167 7.4:-91196321 None:intergenic
TTTGATGAAACTCAGGCTCT+CGG 0.515939 7.4:+91185592 MS.gene54516:CDS
TATCAAGACCTCCCTGTTGA+GGG 0.516419 7.4:-91186150 None:intergenic
TTGATGAAACTCAGGCTCTC+GGG 0.518137 7.4:+91185593 MS.gene54516:CDS
AGCTCCTGCAGCACTAGCAC+AGG 0.518485 7.4:+91195163 MS.gene54516:CDS
CTCTTGCTGTTGTTGTAGCA+CGG 0.519215 7.4:+91185477 MS.gene54516:CDS
AGATCCTTGCTAGTTTGGCT+AGG 0.519367 7.4:+91186931 MS.gene54516:CDS
AAGAATTTGCGCGAAATAAG+CGG 0.519807 7.4:+91185425 MS.gene54516:CDS
AGGAGGAAAGTGGCAAGAAA+AGG 0.519878 7.4:+91185071 MS.gene54516:CDS
GTTCAGGAGAGGGCGGCCAC+AGG 0.520429 7.4:+91186235 MS.gene54516:CDS
AGCCAAGGCGGTTGCAGAAG+AGG 0.521393 7.4:+91186899 MS.gene54516:CDS
CTAGTCTCTTCTTCAAGGAT+AGG 0.522484 7.4:-91185911 None:intergenic
CGTTGCACCTCTGATTGCAT+TGG 0.523124 7.4:+91193395 MS.gene54516:CDS
AAACCTGCATCTCAGATGTC+CGG 0.524228 7.4:-91195213 None:intergenic
AAGCCGGACATCTGAGATGC+AGG 0.524500 7.4:+91195210 MS.gene54516:CDS
CTTGTTGATTAGAAAACATA+CGG 0.524937 7.4:-91195115 None:intergenic
GATGTTCATGAAACGGCTGC+AGG 0.527892 7.4:+91194294 MS.gene54516:CDS
GCTTCAGTCTGAGGCAGCTA+AGG 0.530678 7.4:+91186381 MS.gene54516:CDS
GCCTTGATGAACTCATACCT+TGG 0.532801 7.4:+91186083 MS.gene54516:CDS
CTCAAGAGGATGTTCAGGAG+AGG 0.532960 7.4:+91186224 MS.gene54516:CDS
AAGTGGTCTTCTACTGGAGA+TGG 0.533230 7.4:+91187162 MS.gene54516:CDS
AAGAAGCTGCTGGTGCACTT+TGG 0.534521 7.4:+91189081 MS.gene54516:CDS
GAACAAACTGGTGGCTGAAG+AGG 0.535905 7.4:+91186959 MS.gene54516:CDS
CTTAGATGGAGCCAGAAGAA+TGG 0.536130 7.4:+91195067 MS.gene54516:CDS
TTCTACTGGAGATGGAGTAT+TGG 0.537184 7.4:+91187170 MS.gene54516:CDS
TTATCAAGACCTCCCTGTTG+AGG 0.537597 7.4:-91186151 None:intergenic
GCCAAGGCGGTTGCAGAAGA+GGG 0.540692 7.4:+91186900 MS.gene54516:CDS
GAGGCCATTGCAGCAGCTGG+TGG 0.541859 7.4:+91189131 MS.gene54516:CDS
TTGCAAAATCTTACAGGGAA+GGG 0.541913 7.4:+91186359 MS.gene54516:CDS
ATGCTAGCATTGATTGTGGA+AGG 0.543196 7.4:+91186290 MS.gene54516:CDS
GTCCAAGTTTGATGAAACTC+AGG 0.543484 7.4:+91185585 MS.gene54516:CDS
TGCACAGCGTGTCGTCCACC+GGG 0.545319 7.4:-91196242 None:intergenic
AGTGTTGACGAGCTTGCATT+GGG 0.549270 7.4:+91185701 MS.gene54516:CDS
GAGTGTTGACGAGCTTGCAT+TGG 0.550340 7.4:+91185700 MS.gene54516:CDS
AACGCCTCCTTCTCGTCCAA+TGG 0.551768 7.4:-91193376 None:intergenic
TGCCGATGCTATTAATGCAT+TGG 0.551974 7.4:+91185631 MS.gene54516:CDS
AGCATTGCCATTGGACGAGA+AGG 0.552699 7.4:+91193369 MS.gene54516:intron
AACCCTCAAACTTGGTGATG+AGG 0.556576 7.4:-91185870 None:intergenic
ATTCGAGGGAGTGCAAGAGC+AGG 0.557307 7.4:+91187401 MS.gene54516:CDS
CTAAAGCTTCCTAACCTGAT+CGG 0.558470 7.4:+91185794 MS.gene54516:CDS
AAGATTACCTGACACCCTCA+TGG 0.560437 7.4:-91188259 None:intergenic
CTGGTGGCTGAAGAGGCTGC+TGG 0.560581 7.4:+91186966 MS.gene54516:CDS
AGCCAATGCATTAATAGCAT+CGG 0.562678 7.4:-91185633 None:intergenic
AACAGTAACAATGCTGCTGT+TGG 0.563505 7.4:+91188188 MS.gene54516:CDS
GATAATTTCTGGGTTGAACA+AGG 0.565952 7.4:+91186169 MS.gene54516:CDS
CAGGGAAGGGCTTCAGTCTG+AGG 0.570554 7.4:+91186372 MS.gene54516:CDS
ACTCAGGCTCTCGGGCATCA+GGG 0.571116 7.4:+91185601 MS.gene54516:CDS
GCTGCTGTTGGACAAGAAGC+AGG 0.571322 7.4:+91188200 MS.gene54516:CDS
AGCCAAATTAGCCAATGCAC+CGG 0.572420 7.4:-91187301 None:intergenic
TAGTGGATCTTATATTCAAG+TGG 0.573301 7.4:+91187145 MS.gene54516:CDS
TTCGTTTCCTTTCTGTTGCG+GGG 0.574999 7.4:+91185738 MS.gene54516:CDS
CCGTAGAGTGAGGAGGAAAG+TGG 0.575650 7.4:+91185061 MS.gene54516:CDS
GAGAGTGTTTCTAAAAGTGT+GGG 0.576956 7.4:+91195044 MS.gene54516:CDS
ACTATTCGTAAAGCATTACC+AGG 0.577346 7.4:-91194342 None:intergenic
TGCAGGAGCTGACGATGAAG+CGG 0.579277 7.4:-91195150 None:intergenic
CTTGCAAAATCTTACAGGGA+AGG 0.581547 7.4:+91186358 MS.gene54516:CDS
AAATGCGGTTTCGAGTTGCC+CGG 0.583026 7.4:+91185100 MS.gene54516:CDS
TCTTATGCAGAGTTCTCAAG+AGG 0.583305 7.4:+91186210 MS.gene54516:CDS
TTGGTGTCCCCGCAACAGAA+AGG 0.583600 7.4:-91185745 None:intergenic
AGAGAGTGTTTCTAAAAGTG+TGG 0.586120 7.4:+91195043 MS.gene54516:CDS
AGTGCTCGCATTCTAGAAGC+CGG 0.586448 7.4:+91195194 MS.gene54516:CDS
GGTGCCATTGCGGAAGCTGG+TGG 0.586880 7.4:+91187111 MS.gene54516:CDS
TGGCCTACATGTTTGATGGG+AGG 0.588708 7.4:+91194448 MS.gene54516:CDS
CTCTGTTGGAGAAGAGCACA+AGG 0.589490 7.4:+91187004 MS.gene54516:CDS
CTTCCGCTGGACTTCAAGAG+AGG 0.591222 7.4:+91189558 MS.gene54516:CDS
CGGGGACACCAAGTATGAAG+TGG 0.592556 7.4:+91185756 MS.gene54516:CDS
ACAGAGGTTGCTTTAGCAGG+AGG 0.595884 7.4:+91187342 MS.gene54516:CDS
TTGCGCGAAATAAGCGGTGA+CGG 0.597625 7.4:+91185431 MS.gene54516:CDS
GGAAATTCAAGACGAGGTGG+CGG 0.597657 7.4:+91185121 MS.gene54516:CDS
GAGATTACGAAGAACAATCC+TGG 0.598816 7.4:-91196357 None:intergenic
GAGAGGCGCAGTTGCTGCGG+CGG 0.599511 7.4:-91196318 None:intergenic
GCTCGTCACTGCAAATTCGA+GGG 0.601410 7.4:+91187387 MS.gene54516:CDS
AGATTACCTGACACCCTCAT+GGG 0.602576 7.4:-91188258 None:intergenic
TCAAGAGGATGTTCAGGAGA+GGG 0.604083 7.4:+91186225 MS.gene54516:CDS
TATCAGCAACTTGTAAGACA+TGG 0.605135 7.4:+91185240 MS.gene54516:CDS
GAAAATGCTAGCATTGATTG+TGG 0.606231 7.4:+91186286 MS.gene54516:CDS
TTTAGAAACACTCTCTGACA+TGG 0.607005 7.4:-91195036 None:intergenic
TACTCCACCAGCTTCCGCAA+TGG 0.607253 7.4:-91187115 None:intergenic
TGGCCTTGCAAAATCTTACA+GGG 0.607716 7.4:+91186354 MS.gene54516:CDS
ACAAGAAGCAGGTGCTCTCG+AGG 0.609312 7.4:+91188211 MS.gene54516:CDS
ATGCAAGCTCGTCAACACTC+AGG 0.609484 7.4:-91185697 None:intergenic
GAAATATGAGCCGTAGAGTG+AGG 0.609821 7.4:+91185051 None:intergenic
AACAATCTTGAAACAGCAGA+CGG 0.609951 7.4:-91185845 None:intergenic
CGTGAATGCCAATGTAGCCA+AGG 0.610171 7.4:+91186884 MS.gene54516:CDS
TCCAAAGAACTCCACAAACA+CGG 0.610547 7.4:-91185281 None:intergenic
TTGACCTAGCCAAACTAGCA+AGG 0.614745 7.4:-91186935 None:intergenic
AGGGCTGCTGGTGCTCTATG+GGG 0.614975 7.4:+91189578 MS.gene54516:CDS
ACTTACACGTTCTGCCCATG+AGG 0.615415 7.4:+91188244 MS.gene54516:CDS
GCTGAAGCAGTTATGCGAGA+TGG 0.616153 7.4:+91186313 MS.gene54516:CDS
TTCCGCTGGACTTCAAGAGA+GGG 0.616815 7.4:+91189559 MS.gene54516:CDS
GCCAAGGTATGAGTTCATCA+AGG 0.618337 7.4:-91186084 None:intergenic
ACAATCTTGAAACAGCAGAC+GGG 0.622605 7.4:-91185844 None:intergenic
AGCCCTCTCTTGAAGTCCAG+CGG 0.623085 7.4:-91189561 None:intergenic
ATTGCCATTGGACGAGAAGG+AGG 0.624617 7.4:+91193372 MS.gene54516:CDS
CAGCAACTTGTAAGACATGG+AGG 0.625029 7.4:+91185243 MS.gene54516:CDS
GAAGCAGTTATGCGAGATGG+TGG 0.625950 7.4:+91186316 MS.gene54516:CDS
TTACCTCCCATCAAACATGT+AGG 0.626697 7.4:-91194451 None:intergenic
GCTTTACGAATAGTGGAGGA+AGG 0.627288 7.4:+91194351 MS.gene54516:CDS
GATAGCATCCATTCAAGCCA+AGG 0.627816 7.4:-91186100 None:intergenic
ACCAAGTATGAAGTGGAATG+TGG 0.628231 7.4:+91185763 MS.gene54516:CDS
AAGGCGGTTGCAGAAGAGGG+CGG 0.630572 7.4:+91186903 MS.gene54516:CDS
AGCAACTTGTAAGACATGGA+GGG 0.634490 7.4:+91185244 MS.gene54516:CDS
TGCATTGGCACGATCCGAAG+CGG 0.637113 7.4:+91193410 MS.gene54516:CDS
AAAGTGGCAAGAAAAGGCAA+AGG 0.642105 7.4:+91185077 MS.gene54516:CDS
TTACGAATAGTGGAGGAAGG+TGG 0.643179 7.4:+91194354 MS.gene54516:CDS
CTTACACGTTCTGCCCATGA+GGG 0.651573 7.4:+91188245 MS.gene54516:CDS
AAGAAAAGGCAAAGGAAATG+CGG 0.654437 7.4:+91185085 MS.gene54516:CDS
CTGCATAAGACTAAGCAAGA+GGG 0.655891 7.4:-91186197 None:intergenic
GATCGTGCCAATGCAATCAG+AGG 0.656467 7.4:-91193402 None:intergenic
TCTGCATAAGACTAAGCAAG+AGG 0.657080 7.4:-91186198 None:intergenic
TGCTAGCATTGATTGTGGAA+GGG 0.658355 7.4:+91186291 MS.gene54516:CDS
CCCGGAAATTCAAGACGAGG+TGG 0.659536 7.4:+91185118 MS.gene54516:CDS
TAATGCTTTACGAATAGTGG+AGG 0.660100 7.4:+91194347 MS.gene54516:CDS
ATTGGCACGATCCGAAGCGG+AGG 0.660754 7.4:+91193413 MS.gene54516:CDS
GTGGCTGAAGAGGCTGCTGG+AGG 0.664693 7.4:+91186969 MS.gene54516:CDS
TCCATCATAGGGTGCCATTG+CGG 0.669098 7.4:+91187101 MS.gene54516:intron
AACAAAAGTTGCAAGACCTG+TGG 0.669195 7.4:-91186251 None:intergenic
AGAGGATGTTCAGGAGAGGG+CGG 0.671172 7.4:+91186228 MS.gene54516:CDS
GTGGCGGATTTGGAAGCTGG+AGG 0.674086 7.4:+91185137 MS.gene54516:CDS
ATATGAGCCGTAGAGTGAGG+AGG 0.677214 7.4:+91185054 None:intergenic
CATAAGACTAAGCAAGAGGG+AGG 0.677342 7.4:-91186194 None:intergenic
TCTGCTGAGAGCCCTCAACA+GGG 0.681732 7.4:+91186139 MS.gene54516:CDS
CAAGCTTTGAGTATAGACGA+TGG 0.685786 7.4:-91195927 None:intergenic
TTGCCCGGAAATTCAAGACG+AGG 0.698603 7.4:+91185115 MS.gene54516:CDS
TCACAGTTTACAATTCCCGG+TGG 0.705352 7.4:+91196227 MS.gene54516:intron
GCTGAGAGCCCTCAACAGGG+AGG 0.706334 7.4:+91186142 MS.gene54516:CDS
TAGGTCAATGAACAAACTGG+TGG 0.722298 7.4:+91186950 MS.gene54516:CDS
GAATGCCAATGTAGCCAAGG+CGG 0.732090 7.4:+91186887 MS.gene54516:CDS
ATTTGACGATAGAAACCGAG+AGG 0.747571 7.4:+91189112 MS.gene54516:CDS
TGATGACAAGTGCAGTACAG+AGG 0.766203 7.4:+91187326 MS.gene54516:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.4 gene 91185056 91196409 91185056 ID=MS.gene54516
chr7.4 mRNA 91185056 91196409 91185056 ID=MS.gene54516.t1;Parent=MS.gene54516
chr7.4 exon 91185056 91186402 91185056 ID=MS.gene54516.t1.exon1;Parent=MS.gene54516.t1
chr7.4 CDS 91185056 91186402 91185056 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91186867 91187025 91186867 ID=MS.gene54516.t1.exon2;Parent=MS.gene54516.t1
chr7.4 CDS 91186867 91187025 91186867 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91187111 91187191 91187111 ID=MS.gene54516.t1.exon3;Parent=MS.gene54516.t1
chr7.4 CDS 91187111 91187191 91187111 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91187291 91187422 91187291 ID=MS.gene54516.t1.exon4;Parent=MS.gene54516.t1
chr7.4 CDS 91187291 91187422 91187291 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91188146 91188273 91188146 ID=MS.gene54516.t1.exon5;Parent=MS.gene54516.t1
chr7.4 CDS 91188146 91188273 91188146 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91189079 91189166 91189079 ID=MS.gene54516.t1.exon6;Parent=MS.gene54516.t1
chr7.4 CDS 91189079 91189166 91189079 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91189530 91189624 91189530 ID=MS.gene54516.t1.exon7;Parent=MS.gene54516.t1
chr7.4 CDS 91189530 91189624 91189530 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91193371 91193434 91193371 ID=MS.gene54516.t1.exon8;Parent=MS.gene54516.t1
chr7.4 CDS 91193371 91193434 91193371 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91194294 91194469 91194294 ID=MS.gene54516.t1.exon9;Parent=MS.gene54516.t1
chr7.4 CDS 91194294 91194469 91194294 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91195010 91195231 91195010 ID=MS.gene54516.t1.exon10;Parent=MS.gene54516.t1
chr7.4 CDS 91195010 91195231 91195010 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91195887 91195971 91195887 ID=MS.gene54516.t1.exon11;Parent=MS.gene54516.t1
chr7.4 CDS 91195887 91195971 91195887 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
chr7.4 exon 91196233 91196409 91196233 ID=MS.gene54516.t1.exon12;Parent=MS.gene54516.t1
chr7.4 CDS 91196233 91196409 91196233 ID=cds.MS.gene54516.t1;Parent=MS.gene54516.t1
Gene Sequence

>MS.gene54516

ATGAGCCGTAGAGTGAGGAGGAAAGTGGCAAGAAAAGGCAAAGGAAATGCGGTTTCGAGTTGCCCGGAAATTCAAGACGAGGTGGCGGATTTGGAAGCTGGAGGAGTTGTTGATTGGAGGTGTTTGCCTGATGATACAGTAATTCAGCTATTGTCATGTTTGAGTTATCGCGATCGAGCTAGTTTATCAGCAACTTGTAAGACATGGAGGGTTCTAGGTAACTCTCCGTGTTTGTGGAGTTCTTTGGATCTTCGTTCGCACAAGTTCGATGCCAATGTTGCAGCTTCACTTGCTTCTAGATGTGTGCATCTTCAGAAGCTTAGGTTTCGTGGCGCGGATTCTGCTGATGCATTACTTTATCTTCGAGCTAAGAATTTGCGCGAAATAAGCGGTGACGGTTGCAGGAAGATGACTGATGCAACTCTTGCTGTTGTTGTAGCACGGCATGAGTTACTTGAGAGTCTTGTGCTTGGACCAGATTTTTGTGATAAAGTCACTAGTGATGCTATAAGAGCAATAGCTCATTGCTGTCCAAGTTTGATGAAACTCAGGCTCTCGGGCATCAGGGATGTGAATGCCGATGCTATTAATGCATTGGCTAACTATTGTCCAAAGTTAACTGATATCGGGTTCATTGACTGCCTGAGTGTTGACGAGCTTGCATTGGGAAATGTGCAATCGGTTCGTTTCCTTTCTGTTGCGGGGACACCAAGTATGAAGTGGAATGTGGTTACGAATCTAAAGCTTCCTAACCTGATCGGATTAGATGTTTCAAGAACTGATATCGGCCCGTCTGCTGTTTCAAGATTGTTATCCTCATCACCAAGTTTGAGGGTTTTGATTGCTTTGAATTGTCCTATCCTTGAAGAAGAGACTAGCTTTTCTGCTAGTAAATATAAGAACAAGTTGTTGATTTCCCTATCAACCGATATTTTTAAAGGACTAGCTTCTTTATTTTCCGACAATATAAATAGAGGAAAGAACGTGTTTTTGGACTGGAGGACTTCAAAGACTTACAATGATAAGGGCCTTGATGAACTCATACCTTGGCTTGAATGGATGCTATCCCATATACTTTTGCGTTCTGCTGAGAGCCCTCAACAGGGAGGTCTTGATAATTTCTGGGTTGAACAAGGTGCCTCCCTCTTGCTTAGTCTTATGCAGAGTTCTCAAGAGGATGTTCAGGAGAGGGCGGCCACAGGTCTTGCAACTTTTGTTGTAATTGATGATGAAAATGCTAGCATTGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGTGGCATACGCCTCCTTCTTGGCCTTGCAAAATCTTACAGGGAAGGGCTTCAGTCTGAGGCAGCTAAGGTATTCTCTCTTTCCATTTGTATCTGTCTGGTCCATCTGACCATTTCTAATAACTTTTACTTGTACATGTTGCTGGAAAAACTGATACTTATTTGTTAGTATTCTCGATCTATGACCATTTCTAATAACTTTTACTTGTACATGTTGCTGGAAAAACTGATACTTATTTGTTAGTATTCTCGATCTATGAAGCATAGACATTTGACATGACACTGACATGGTGACACCGATAATTATTTTAAAAAATGGAATAATTGAATGTAAACTTGTGTCGATGTTGTGTGAGATACCGGACACACCTCCAATTTGAAGTGTCGGTGCTACATAGCTCTCCATGGCCAATGCCTTTTGCATGCATACCCATTGTGCAGTTTATGTGCACTGTGTGATGTCTTTTAATATTTTGCTTACAAATCTGACCAAAGAATTTGCGTATGTATTCTCTGAACCTTCTCAATTTACAGGCTATTGCGAATTTGTCCGTGAATGCCAATGTAGCCAAGGCGGTTGCAGAAGAGGGCGGAATTGAGATCCTTGCTAGTTTGGCTAGGTCAATGAACAAACTGGTGGCTGAAGAGGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGTTAGATTTTGTATCTGATTTGATTTTTCTTTTGAAATTTAATGCGTACGGTTTGAAGTAAAAGCTGAAGTGGCTTCCATCATAGGGTGCCATTGCGGAAGCTGGTGGAGTACAAGCTTTAGTGGATCTTATATTCAAGTGGTCTTCTACTGGAGATGGAGTATTGGTAAGTTTCTTCATTTTATGACTGTGATCGTGTTCAGTGCCTTTCTTGCTTCATATGTTCAACAATAGAAGTTGTTTTACAATGATTTTGTTTTTTCAGGAACGTGCAGCCGGTGCATTGGCTAATTTGGCTGCTGATGACAAGTGCAGTACAGAGGTTGCTTTAGCAGGAGGTGTACATGCTCTAGTGATGCTCGCTCGTCACTGCAAATTCGAGGGAGTGCAAGAGCAGGTAGTAATACTCTCTATAATTTGGGTATCATCTATTTTTGTTACTAAAATCTTTGAAGCTACTTTATTAGGTTGATAATGTCTGCCAATTGAAGATTGGGACTCGTATTAGTTGTTTTTCTTTGTAAATGATAAGTAATTGTTATTTCCTTTTTGCGTGGGAGTCTTTTTGTGGGGCAGATATTGTAGAAATGGTTGAATTGATTTTTAGCTTCTATTCCTTAACTTGGAAGTTGTAAGGCTTAGAAATGCCCAAGTCCTTTATTATTCTTATTTGATTTTCGGATTCATTCTATAACACGGCTATCCAATTCCGGTGGAGTTATTTTCTATCTTGTGTTTTCCTATACTTGAACTTCACACATTTTACATTTGTGAAGGTATTAGCTTTTTTTTTTTTTTTTTTTGTGCGCGCGCGCGCGTGCGTTTGTATTGAGAAAAAAGTGATTGTTTTCAACATTTCATTTCAATTTTGATGGAAATGTGGTCAACATTGTGGTCCATTCTGGTCATTGATCATCTCCGCATTCGGGATAATAAAATGCATGCCTTATTTGTGATCTACCTTAGCTAAGAGGTGCTTCTATTGTTCCTTCCCTATGCATTATGATTTCTTGGTGACATTACTCATTGTATGTATAATTGTAATTATTGTCCTGTCCATTGTGGTAATGTAACTCTGAATTGGTGTGGATTAAATAATATTATTCCTCTTAAACACTAGGCTGCTCGTGCATTGGCAAATTTAGCTGCTCATGGAGATAGCAACAGTAACAATGCTGCTGTTGGACAAGAAGCAGGTGCTCTCGAGGCTCTTGTTCAACTTACACGTTCTGCCCATGAGGGTGTCAGGTAATCTTCTATTAGTTTTTTACATTTGTGTCGGTTTACTGCCCTATTACTTTTTTATGCCTTTATTGAAAATATAGGAATTAGATGGATACAAGAAAAGGGAGATAGAGGAAACATGTAGAAAATGTATTTTGCCAATGATGCTCTTAATAATTTGATGCATAAAAACAAGGATCATAATACTTGTTCTTTGATGGCTTTCTTATTTGTTAATTATGTTTTATATTCTGCCAAGGACCACTGTTGTTCCACAAGTGCTGTCACTTGTCAGATAGTGGCTATGGCATTGTAGCATAGTGGAATTTGAACAAACCGCTATTTTCTGTGATTTACAATTGACAACACTGGTTCAAGTGTGGAACAAATATATGAAAAGACTAAAGGACATTGCTGGTAGGTTTTGAGTCAAGTTGTGTCCCTGCGTGCACAGTTGAAGTTTGTCACTAAGTCCATTGATATTAGAAATGTTATGAAAGTATTAAACCATTCATGTGGTTTCACCTAACAATACAATTGGTTATGACAATTGCTTAGATTTGAATCCTTCTCATTCTCATTCTTATAAATAAAAAAGATTGACGCACAACCTTTGAATTAACCCCATTTCAATCCTAAAGCGTTCTTACATGAGGGGTGTGTTGTGAAATGTTAATAGGAGTATAACATCATTCATAGCCTATGCTTTTAAGATAGTTGGTTCTTGACAATTTTCCTTCTAGTTCTTCTCTTTGTCATGTACTCCTGTACCTGCAAAAATATTACATTCGTTCCTGTGTTGATTTCATATTTTGTCATATTTCTATAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGACGATAGAAACCGAGAGGCCATTGCAGCAGCTGGTGGAGTTCAAGCTTTGGTATGTTTTGTGCCTTGCTTAGCTAACTTCTTTTTTCTTTCTAAAGTATATACACTAATAAGTATTCCCTCTAGTATACGAAAAGCGTCTCCTTAGTCCCTGCGATTAATATGTTAGAGACAAGCATGATGAATTTTCATATAGTTTAGGGATTTCTTATTATTTTTATATATTTTAGAGACTAAATTGGAGAGAGAGTGTGATGCTTTAAGGACTAAATTGAAAGTTAATTCAAATTATTTATCCTTTTCCAAAATAAAATCAATCTTTTTATGGATCTCATGTAATTTGTTTACAATAGCATTAACATTGTAGAGACTAAAATGTTCATATATTTATGCTTTTACATGGTGGTTTATGTAGGTTACTCTTGCTCAATCCTGTTCTAATGCTTCCGCTGGACTTCAAGAGAGGGCTGCTGGTGCTCTATGGGGATTGTCAGTTTCTGAAGCCAACAGGTACCTTACAGTTCCATTTATTTCATTCTGACAATATTGTTCTTGTGAATCTTTATCGTTGAGACATTCTCTTAGAACTCTTTCATGTATGATGGACTATTGGAGTAGCCAACCAGTCAATGGGAAAATATGATTAGGATCTTTGTAATGATCCTATATTTATTGGGAATTGCTCTATTGGCCCCCACATTGCTGGAAGAAGCCCCCCATATATCGGAAAATAATTTCCGATGGCACAAACGTATCGGAACCTCTCGGATTCTATGTTCCGCCGTCTGCTGCCCCTTGTTCCAGTGACAATTTTTACAACTGATCTCACCACCAGAACCGGCATCTCCCAATCGAGCCATTCCCATAATTACGCCGCCATCAAACCTTTAATGCACTTCCGCTGCTTCCAATGTGTTTGCGAATCAGAAAGGGTTATTGTTGTCATTCCCCCAATCTGCGAAGCTATACGGTCTCGTCTGATGTGGAATTCCTCCTGTCACTGTCGAGTACACTGAGTAATGCCCCAGGTTCGAGCGAATCCTTCTCTTTGCTCCTTCCAACTTACAAGTCCATCATTGTCGGAAACTTCCACCCTTAGTTACTGTGCCTCCACCTACAACACTTGTGGATTCCCTTCCAACTCTACTGCCTTCTCTGGCCCTAACACCTACACTAGATCTTCCTATTGCACTCAGAAAAGGTATAAGGTCTACTCGTAATCCTTCTCTTCATTATGTCAATTTGAGCTATCATCGTCTGTCACAAACGCATTTTGCTTGTCTTTCTGCCCTCTCTTCTGTGTCTATTCCTAAATTGCAGGTGAAGCTCTTTTTGATCTTGGGTGGGGACAGGCTATGGTTGAAGAAATGTGTGCTTTACAACAGTGGGACTTGGGATTTTAGTTGGTTTTTACAATTAAAGATGGTCCTGACAAGGCTAGTTGCTAAATGTTATACACATGTATCTGGCTTGGATTATGGAGATACCTTTTTTGAAGTATCAAAAATGACATCTGTTCGCTTGTTCTTGTCCATGGCTGCTATTCGCCATTAGCTTCTTCATCAACTTGATATTAAGAATGCTTTCCTCCATTGGGATCTAATTGACGAAGTTTATATGGAGAAACATCTTAGATTTGTTGCTATAGGGGAGTCTACTAGGCTATTTTTCTGCTTACGCATGTCTCTATATGACCTTAAACAATCTCCTCGAGCATGATTTAGAAGATTTACCAATGTTTAAACAATCTCCTCGAGCATGATTTAGAAGATTTAGCAATGTTGTTTAGTAGTTTGGTGTGATTAAAAGTGAGTTGGATCACTCAGTTTCCTATTGCCATTCAACCATAGTTGGCATTTACTTTGTTCTGTATGTTGTCGATGTTGTCGTTATAGGCAGTGATCCATCATGGCATTGCTCAGATTAATCAGCATATCTGTCACCATTTTCAGACAAAAGATCTTGGCAGACTATAGTATCTGTTGGGGGATAGAGGTGGCAAAATCCAAGGACGGTCTTACAATATCACAAAGAAATTATGTCGTTGACATTCTAGAGGAAACAAGTTTGATGAATGCTAAACTTGCCGACACTGCTATGTATCCCAATGTCAAGCTTCTACCAAATCAAGGGGAGCCACTCTCAGATCCAGAAAGATATAGAAGATTAGTAGGCAAACTAAATCACCTCACTATCATTCGCCCATATATCTCCTTCACTGTTAGTGTGGTAAGTCAATTTCTTAACTAGCCTAATAAAGAACATTGGGTTGTCATTATTCACATTTTGAAGTGCATGAAGGAAGCTCAAAGCAAAGGTTTCATTTATGAGAACCATGGTCATACTTGAGTTGTGGGATAGGGATACTCATGTTGATTGGAAAAGCTCTCCTGCAGACAGGATCCAGTTTTGGATATTGTATACTCATTGGGGGGCAACCTCATCTCTTGGAAAAGTAGGAAGCAGAATGTTTTTGCTAGATCGTGTGCCCAGCAGAATAGCAGCTCACATGACTCAAGCAGTTACTTCGGGAACTTAGATTTGGAGAGGTTGCACGGGCGACTCTCATTTGTGATGATCAAATTGCTTTGCATATTGCCACAGATTCAGTATTCCATGAGAGAACTAAGCATTTTGAGATAGATTGTCATTTCATCAATGTGTAGAAATCACTAATTTTATTGGCTCAAATGATCAATTGACACATGTTTTCCCAAGTCCTTGAGGAGTTCTCGATAAACTATAGCTTGGTGCATATGATTTATCTGCTCCAGCATGATGGTGTGTTGGAAAAATGATTAGGATCTTTGATATTGTTCTAGTTATGCTATATTATTTGCATTTATTGCATTAAGCCTACACAAAACAGACTTCATTGTGTAGTTCAAACACTCGGGTTCACCATATGCCTTAACATATCTGTAAACCAGTACCTAAAATCTGTCTCAATAATTTTTTCACTTGAATAAAAAAACACCGCATGAAGGATTTTGGTTAGTTGCAAGCATGAAGTCTTTCTGTGATTCAATCAAGTTTGGATGTGCTAGAGTCACATTGGAAAGGACAGTTGTTGACAACTTAAATGTAGCAGTGGAAACTATGACTTTATGCAGTTGCATTTATGGGAAGGGATGGTGATTGTTCTGTTTGGTTTATTGATAATGTTGGGCTATTGTGAAATTTAAAATGGTTCGTTTTCTATTATAAATACTAGAAAGTTTTAGCATTTCCAGAATCAATTTATGTGATTTTCATTTGTAGTTTTGCATTCTTATTGTTTTGAAATGGAAACGTAATTAAACTAGCAACCAATGAGGAAGAAAATACAAAGGCTAACCTATTAGGAAATAGACAATTTCTGGATGGAGTTCGACGGAGAGCTAACTCTCGACTAAAGGTTATGGGTAATAGTCGAGACTCGTCTTATTCTACTTAATTGCAGTTCTACTAGTGCTTTAGTTCGATCACATTTCCACAACCTAGTCTCTGTCAATGCTGAATGCTGCCGAAGTTTGATTAGATCAATTTATGATTGAACTTCGATTTTTGGGATATTATGTAAATAACTCAAGTACAACCAAGTAAGAAGCTTTGCATGTCACCCCCAATCTAGTGTTTCAGTGGTGGAAAGACCAAACATATAGACTATCATTTCATTGAGAAAAATATCCTATCAGGTAGAGGTTCCTATCAATTATCAACTAGCAGATGTCTTCACTAAATTGTGAGACGTTCCTTCTTGTGCAATAAGTATAATTCATGTGATCTATATGCCCCAAACTTGAAGGCAAGTGTTGTATGTGTAATTAGTCTTTTTTTCCAATATAGTGTTTAGGTTCATTGAGTGTAATCATTTAGATTAATATATATTCTTTGGTATTCTTTGGTCTCTATTGTGAATTTACTCATGGTTTTCTTTTTCTCCTCTTGACAGCATCATAAATAGTTTCCAATCCAACTAAATGATTTTGCCAAAAACATAGAAAAAAGAAGTAGATGGCCTTTTCTGGTCTTTACTTCTCAGTTTCTCTAATAAGCTAAATGATCTAGTTCATCGCACCTTTTGTATGTTATTTTTTTTCCCGCTTTCTTGTTTTCTAATACATCCTTACTTTAATGGAAGATTTATACATTTTGGTTTTATTTGACTAATATATAGATTTGAGTCTGAACACCCAAGTGATAATTGACAATTTAATTTTTTTCATTTGAACATATATGTTAATATTCATTTATGTTGGTCTTTGTTTGCTCAGCATTGCCATTGGACGAGAAGGAGGCGTTGCACCTCTGATTGCATTGGCACGATCCGAAGCGGAGGTAATTTATTTTCTTGATGTCCAATGTCTATATGTTTATTTGATCAATGTCAGACAGCACATGACAATGCTGAAAAATTATCCCATTTCTGTGCATTGATTAGTTCATCGCCAGTCTTGTTAGCAGTTTTTAATGTTGCTTTAGACTATAGTAGAGTAGTAGCTGTATGCCCTTATATTGGTGTGCTCTTCAAGCCTTTTTCTCTTTTGGTTTTGTGTATTAATAATAGTTGTTTATAATAAGTGGTTAAACAGACATAACTTAAAATTTCTGCTAGCCACTAGGCTGTTGATAGTATCTTCTTGCTTTTGATAAAAACTTACTTGAGTTATTGCAATTTCAGAAATTGTCACCATATATACTAAACCCTTTCTAACTGTAATCTGATAAAAAAAAAAAAAAAAGTATTGTAAGTAGTGGCTATAGGTTGTGGAATTTGAACAAATCATTATTGTTCTGCGATGCGCTATTAAGTGAATAATGTTGTCGAATGGTGGCTATAGAGGCACTATATCACTCTTATGTCGTGCAATTTGAACAAACCGCTATTTTCCTTGATCCGTGAGTGATAACATGATCAAAAGAATATCACACTTGATGACATTGGTGGTATACATACAAGTATAACCATTATGCTAAAGCATGTCTTGGGGGCTGGTGTTGTTGTACTTTTTAATATATTTTAGCCTCCAATGGGTAATTCTGTGTATCCTTGTGTGCAATTTCTGGCATTCCAGTCACCTGTATTTCTTGCCTAACAAGCATTTTACATTGTTTTATGTCTGTACATCATTTTCCCATCTTAATTTTTTTAGACATGTCAAATGCTGATTAAACTCAAACCACTTTCCGCTTCCAGGATGTTCATGAAACGGCTGCAGGAGCGTTATGGAATCTTGCTTTCAATCCTGGTAATGCTTTACGAATAGTGGAGGAAGGTGGAGTAGCTGCACTTGTTGAGCTCTGCTCTTCATCAGTGTCAAAAATGGCACGATTTATGGCAGCACTGGCTTTGGCCTACATGTTTGATGGGAGGTAATAATTTGATAAAAAACCTGCTTGTAACAAACTTAGGGTGCGTTTACTTTTGGTGTTTCCTATGTTCATTGTAACTGATAAAATTAACATTAGAGAAGTCTTACGGAAGTCCTTTTTTTTTTTTTTTTTGAGAGGAAGTCTTATGGAAGTTTCTGAGAATGCATGTTAATAATAGATCAAATATTTTAAAAAATTCTGAAAAGTTTCATAACAGTGTCACCAGAAATGCATTCTCTCTAGTTAGCTTCCATTTTCTCTTCATCACATTTAGAAATGGAATCCATAACCAAATGTTTATTCCAGCACCCACATACAAAGTAAATATTGAAAATGTTGTTAGAAAGTTAACAGTTCCGAAACTTAGATTATATATTTCCACATTTATTATAATTTATTTCCTTAATCAGCATTAGGAATCAACTATTAGTATAAATAAGGATTAGTAACTTAATCAGTAAAATGAATATTGGAAGCAATTGAAAATTGTGAAATGCAGTGTTTAACCGATTAAACTGAGTATCACAACGTGTTTTGCAGAATGGATGAATTTGCTTTAGTCGGCACCATGTCAGAGAGTGTTTCTAAAAGTGTGGGCTTAGATGGAGCCAGAAGAATGGCTCTGAAACACATTGAAGCATTCGTCCGTATGTTTTCTAATCAACAAGCATTTGCAGCTGCCGCTTCATCGTCAGCTCCTGCAGCACTAGCACAGGTTACTGAAAGTGCTCGCATTCTAGAAGCCGGACATCTGAGATGCAGGTTTGTCTTTCCTTCTAATGCCACTCAAAGTAGCTCTTATTAAGTTGTACCTTTCTAACTATGTAGCTTTATCACTGACACATGTGACAATATTACATTCAATTACTTTTAATTCTCAAATTACTACCAGTGTCGTGTTAATGTTGTGTGCAGTGTCTGTGTCACTGCTTCATAGCTAACTCATATTTAGTCATATTTTCTCATGATAGAAAGCCATTTACAGCAGCTGAAATTTTTGCTATTCTTGGTTTCGCCATAAAGAATAATCTGTTTTACATTTTCAATGCAATAGAATGTACAAATTTAAGTTTCTCTAGTCATCTTTGTGTACTGAATTAGTCACGTCATTAACAATTTTGAGCAATCATCTTATTCCGAATCCGCACTTAATGAAAACTTAGACCAAGAAGTAAATACTTAGTAAGAAATGATATTAAGCTATTCTTTAGTTTAACTTTTTTTCTTTATCAGAATGCATCATTCATTCTTTCAGTGGAAATGTTAGACTGATCACTCTCATACATATCTAAATTCATGGGAATTCTTGTGCTCTTATAGTTCTTACTTTCATTGCTCTCACATTTTCCCTATCAACCTCGCATCATTTTTTTATTTCGAAGATAATTTACCTGATTTTATTTTCATTGTTCTTCAGTGGTGCTGAAGTTGGAAGATTTGTTACTATGCTAAGAAATCCATCGTCTATACTCAAAGCTTGTGCAGCATTTGCTCTACTCCAGGTAACTATAGCAACCTGCTTGGTTTTCATCTATACTAGGGCTTTAAATAAAGGTCTGCGATCACAATGTGGGTCACTGCGTGATGCTTTTGATATTTGCCGAAACCACAATGCGAGCACATTTGAGGCTGTATCTGCACATTTGACCTCAATACTCCACAACATCAAAAATCACAATGTGACCGCACTTGTTATTTAAAACCCTTATGTATATATATCGAGTTTGAATTCTGACTTCATATGATTTTTCTTGCTATCACAGTTTACAATTCCCGGTGGACGACACGCTGTGCACCATGCCAGCCTCATGCAGAAAGCAGGTGCAGCAAGAGTTCTGCGTAGTGCAGCCGCCGCAGCAACTGCGCCTCTCGAAGCAAAAATCTTTGCCAGGATTGTTCTTCGTAATCTCGAGTATCATCATATAGAGCATACTGTGTAG
Protein sequence

>MS.gene54516.t1

MSRRVRRKVARKGKGNAVSSCPEIQDEVADLEAGGVVDWRCLPDDTVIQLLSCLSYRDRASLSATCKTWRVLGNSPCLWSSLDLRSHKFDANVAASLASRCVHLQKLRFRGADSADALLYLRAKNLREISGDGCRKMTDATLAVVVARHELLESLVLGPDFCDKVTSDAIRAIAHCCPSLMKLRLSGIRDVNADAINALANYCPKLTDIGFIDCLSVDELALGNVQSVRFLSVAGTPSMKWNVVTNLKLPNLIGLDVSRTDIGPSAVSRLLSSSPSLRVLIALNCPILEEETSFSASKYKNKLLISLSTDIFKGLASLFSDNINRGKNVFLDWRTSKTYNDKGLDELIPWLEWMLSHILLRSAESPQQGGLDNFWVEQGASLLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSYREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILASLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGVQALVDLIFKWSSTGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARHCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSAHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVTLAQSCSNASAGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVAALVELCSSSVSKMARFMAALALAYMFDGRMDEFALVGTMSESVSKSVGLDGARRMALKHIEAFVRMFSNQQAFAAAASSSAPAALAQVTESARILEAGHLRCSGAEVGRFVTMLRNPSSILKACAAFALLQFTIPGGRHAVHHASLMQKAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHIEHTV