AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54722

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54722.t1 MTR_6g008530 77.538 325 71 1 1 323 95 419 0.0 520
MS.gene54722.t1 MTR_6g008620 76.161 323 75 1 1 323 95 415 0.0 520
MS.gene54722.t1 MTR_6g008600 75.926 324 77 1 1 323 94 417 1.64e-180 509
MS.gene54722.t1 MTR_4g018800 75.309 324 78 2 1 323 93 415 1.69e-180 509
MS.gene54722.t1 MTR_6g008650 65.337 326 107 4 1 323 93 415 3.51e-149 430
MS.gene54722.t1 MTR_6g008640 64.706 323 112 1 1 323 93 413 2.05e-148 428
MS.gene54722.t1 MTR_3g014880 60.736 326 123 3 1 323 93 416 8.45e-139 404
MS.gene54722.t1 MTR_6g042610 59.451 328 120 4 2 323 89 409 2.64e-138 402
MS.gene54722.t1 MTR_6g008430 58.514 323 127 4 1 323 93 408 2.76e-135 394
MS.gene54722.t1 MTR_6g042540 55.418 323 140 2 2 323 89 408 5.64e-129 378
MS.gene54722.t1 MTR_6g008500 51.032 339 146 3 1 323 91 425 5.33e-118 351
MS.gene54722.t1 MTR_2g450040 45.820 323 166 3 1 323 93 406 6.96e-92 283
MS.gene54722.t1 MTR_4g088400 46.130 323 162 4 1 323 100 410 4.48e-91 281
MS.gene54722.t1 MTR_8g012585 43.519 324 174 4 1 323 26 341 1.05e-90 278
MS.gene54722.t1 MTR_4g088425 43.344 323 162 3 1 323 93 394 8.64e-86 267
MS.gene54722.t1 MTR_6g022450 43.168 322 169 4 3 323 94 402 3.01e-81 255
MS.gene54722.t1 MTR_8g012590 41.796 323 161 5 3 323 94 391 1.54e-75 240
MS.gene54722.t1 MTR_5g018480 47.210 233 115 3 1 233 94 318 9.43e-71 223
MS.gene54722.t1 MTR_6g008630 40.557 323 100 4 1 323 95 325 2.65e-70 225
MS.gene54722.t1 MTR_4g095050 37.695 321 187 4 4 323 86 394 9.78e-68 220
MS.gene54722.t1 MTR_5g016410 36.728 324 187 5 1 323 84 390 3.25e-62 206
MS.gene54722.t1 MTR_4g094775 35.404 322 190 4 3 323 86 390 9.98e-62 204
MS.gene54722.t1 MTR_8g020940 34.769 325 194 5 1 323 88 396 1.53e-59 199
MS.gene54722.t1 MTR_8g020950 35.077 325 193 5 1 323 90 398 3.66e-59 198
MS.gene54722.t1 MTR_4g077210 36.923 325 185 7 2 323 88 395 9.79e-59 197
MS.gene54722.t1 MTR_2g437880 36.615 325 191 5 1 323 84 395 8.09e-58 194
MS.gene54722.t1 MTR_4g094772 34.985 323 183 4 1 323 86 381 4.77e-57 192
MS.gene54722.t1 MTR_2g437840 33.437 323 196 5 3 323 85 390 1.12e-55 188
MS.gene54722.t1 MTR_5g016440 34.259 324 191 6 1 323 83 385 4.18e-55 187
MS.gene54722.t1 MTR_7g087520 33.746 323 201 5 3 323 91 402 1.05e-54 186
MS.gene54722.t1 MTR_8g020960 32.615 325 201 5 1 323 89 397 1.20e-53 183
MS.gene54722.t1 MTR_4g035330 34.985 323 183 5 1 323 83 378 1.56e-53 182
MS.gene54722.t1 MTR_3g024520 33.025 324 203 3 1 323 84 394 4.31e-52 179
MS.gene54722.t1 MTR_3g025230 33.642 324 201 3 1 323 84 394 8.32e-52 179
MS.gene54722.t1 MTR_7g056103 32.915 319 198 6 2 319 87 390 4.63e-51 176
MS.gene54722.t1 MTR_1g023730 33.435 329 203 7 1 323 85 403 4.83e-51 176
MS.gene54722.t1 MTR_3g025260 31.481 324 208 3 1 323 84 394 5.11e-51 176
MS.gene54722.t1 MTR_4g109470 32.722 327 198 5 1 323 83 391 2.91e-50 174
MS.gene54722.t1 MTR_8g076290 33.333 333 187 10 2 323 88 396 5.38e-50 174
MS.gene54722.t1 MTR_4g088415 38.362 232 133 3 1 232 98 319 6.30e-50 170
MS.gene54722.t1 MTR_7g092600 34.365 323 194 6 1 323 91 395 1.39e-49 172
MS.gene54722.t1 MTR_8g036185 30.864 324 203 4 6 323 92 400 1.19e-48 170
MS.gene54722.t1 MTR_3g057980 33.230 322 184 9 2 319 90 384 1.21e-48 170
MS.gene54722.t1 MTR_4g062500 32.523 329 201 7 1 323 87 400 1.84e-48 170
MS.gene54722.t1 MTR_3g057910 32.110 327 197 6 1 323 90 395 2.12e-48 169
MS.gene54722.t1 MTR_3g076530 32.722 327 193 5 1 323 92 395 6.65e-48 168
MS.gene54722.t1 MTR_3g020780 31.707 328 204 5 1 323 87 399 3.76e-47 166
MS.gene54722.t1 MTR_4g104610 31.307 329 203 6 2 323 81 393 1.03e-46 165
MS.gene54722.t1 MTR_4g071710 31.157 337 197 8 1 323 89 404 2.55e-46 164
MS.gene54722.t1 MTR_4g062510 33.133 332 197 7 1 323 89 404 9.11e-46 163
MS.gene54722.t1 MTR_5g019010 29.664 327 206 6 1 323 89 395 9.57e-46 162
MS.gene54722.t1 MTR_3g076560 31.173 324 203 4 1 323 103 407 1.19e-45 162
MS.gene54722.t1 MTR_7g012330 33.436 326 193 8 1 323 87 391 1.66e-45 161
MS.gene54722.t1 MTR_8g466180 28.173 323 208 7 1 319 87 389 2.04e-45 161
MS.gene54722.t1 MTR_5g018990 30.887 327 202 4 1 323 90 396 3.43e-45 160
MS.gene54722.t1 MTR_3g436540 32.628 331 189 6 2 323 93 398 4.16e-45 160
MS.gene54722.t1 MTR_4g088405 36.824 296 131 7 37 323 76 324 5.75e-45 159
MS.gene54722.t1 MTR_4g104540 31.804 327 196 8 2 323 19 323 8.61e-45 158
MS.gene54722.t1 MTR_4g026200 34.043 329 189 8 1 323 82 388 1.70e-44 159
MS.gene54722.t1 MTR_7g012860 33.537 328 192 8 1 323 86 392 2.19e-44 158
MS.gene54722.t1 MTR_0287s0060 33.537 328 192 8 1 323 86 392 2.19e-44 158
MS.gene54722.t1 MTR_3g057970 31.464 321 188 7 2 319 87 378 2.23e-44 158
MS.gene54722.t1 MTR_4g104550 32.407 324 197 6 2 323 81 384 3.01e-44 158
MS.gene54722.t1 MTR_5g070920 32.121 330 191 8 2 323 90 394 3.36e-44 158
MS.gene54722.t1 MTR_3g436390 31.915 329 191 7 2 323 89 391 3.61e-44 158
MS.gene54722.t1 MTR_5g045770 32.099 324 194 7 1 319 82 384 3.74e-44 158
MS.gene54722.t1 MTR_7g028020 30.793 328 197 6 2 323 85 388 5.20e-44 158
MS.gene54722.t1 MTR_5g021390 30.211 331 195 9 2 321 97 402 7.27e-44 157
MS.gene54722.t1 MTR_7g027960 30.793 328 197 6 2 323 85 388 8.79e-44 157
MS.gene54722.t1 MTR_6g084770 31.212 330 198 7 1 323 89 396 1.28e-43 156
MS.gene54722.t1 MTR_3g057860 29.375 320 207 3 1 319 89 390 1.34e-43 156
MS.gene54722.t1 MTR_5g470730 29.969 327 203 5 2 323 90 395 1.60e-43 155
MS.gene54722.t1 MTR_3g058380 29.063 320 205 6 2 319 10 309 3.04e-43 154
MS.gene54722.t1 MTR_4g025970 31.077 325 197 6 1 319 82 385 3.49e-43 155
MS.gene54722.t1 MTR_5g018980 29.607 331 204 7 1 323 89 398 4.12e-43 155
MS.gene54722.t1 MTR_4g102310 31.692 325 202 5 1 323 91 397 5.08e-43 155
MS.gene54722.t1 MTR_4g089030 32.923 325 199 8 2 323 101 409 8.44e-43 154
MS.gene54722.t1 MTR_4g089025 31.481 324 202 6 2 323 105 410 9.88e-43 154
MS.gene54722.t1 MTR_5g070690 30.275 327 202 4 2 323 88 393 1.02e-42 154
MS.gene54722.t1 MTR_5g070800 30.275 327 202 4 2 323 88 393 1.02e-42 154
MS.gene54722.t1 MTR_3g057800 29.688 320 204 4 1 319 88 387 1.11e-42 154
MS.gene54722.t1 MTR_3g057900 30.841 321 193 5 2 319 90 384 1.17e-42 154
MS.gene54722.t1 MTR_3g058220 29.630 324 206 6 2 323 90 393 1.21e-42 154
MS.gene54722.t1 MTR_0181s0030 30.699 329 200 5 1 323 86 392 1.28e-42 154
MS.gene54722.t1 MTR_3g058110 28.173 323 208 7 1 319 91 393 2.50e-42 153
MS.gene54722.t1 MTR_7g092620 33.742 326 196 6 2 323 87 396 2.66e-42 153
MS.gene54722.t1 MTR_5g070710 30.581 327 199 6 2 323 89 392 4.77e-42 152
MS.gene54722.t1 MTR_1g107295 32.229 332 200 7 1 323 90 405 5.57e-42 152
MS.gene54722.t1 MTR_0022s0290 31.024 332 202 8 2 323 94 408 1.35e-41 151
MS.gene54722.t1 MTR_4g025980 33.841 328 190 8 1 323 83 388 5.28e-41 149
MS.gene54722.t1 MTR_3g058060 29.595 321 203 5 2 319 92 392 6.72e-41 150
MS.gene54722.t1 MTR_2g065360 29.012 324 210 7 2 323 59 364 6.96e-41 149
MS.gene54722.t1 MTR_8g468780 30.341 323 212 5 1 323 18 327 1.97e-40 147
MS.gene54722.t1 MTR_3g058210 28.882 322 206 6 1 319 90 391 4.31e-40 147
MS.gene54722.t1 MTR_3g058000 28.571 322 206 7 2 319 92 393 4.49e-40 147
MS.gene54722.t1 MTR_5g094550 28.135 327 205 7 1 323 92 392 6.47e-40 146
MS.gene54722.t1 MTR_1g023700 32.219 329 207 8 1 323 86 404 6.81e-40 147
MS.gene54722.t1 MTR_4g102280 31.077 325 203 5 2 323 97 403 8.28e-40 146
MS.gene54722.t1 MTR_4g026050 33.131 329 192 8 1 323 82 388 9.46e-40 146
MS.gene54722.t1 MTR_8g469300 30.031 323 213 4 1 323 87 396 9.74e-40 146
MS.gene54722.t1 MTR_5g073250 29.052 327 202 7 1 323 92 392 1.35e-39 145
MS.gene54722.t1 MTR_1g023720 32.523 329 206 7 1 323 85 403 1.40e-39 145
MS.gene54722.t1 MTR_4g104640 30.031 323 205 7 4 323 105 409 2.05e-39 145
MS.gene54722.t1 MTR_5g070700 30.581 327 201 6 2 323 90 395 2.31e-39 145
MS.gene54722.t1 MTR_5g094560 28.746 327 203 7 1 323 92 392 4.06e-39 144
MS.gene54722.t1 MTR_5g070850 28.354 328 208 6 2 323 89 395 7.92e-39 144
MS.gene54722.t1 MTR_5g095290 29.664 327 198 10 1 323 94 392 1.93e-38 142
MS.gene54722.t1 MTR_5g073320 29.429 333 193 8 1 323 93 393 2.81e-38 142
MS.gene54722.t1 MTR_4g133750 29.063 320 201 7 1 319 92 386 3.45e-38 142
MS.gene54722.t1 MTR_3g058230 27.500 320 210 6 1 319 18 316 4.46e-38 140
MS.gene54722.t1 MTR_5g070830 30.492 305 180 7 27 323 225 505 5.40e-38 142
MS.gene54722.t1 MTR_4g048580 27.077 325 211 6 1 323 92 392 5.43e-38 141
MS.gene54722.t1 MTR_6g035115 31.288 326 195 5 1 323 90 389 1.17e-37 140
MS.gene54722.t1 MTR_5g095260 29.268 328 199 10 1 323 94 393 2.47e-37 139
MS.gene54722.t1 MTR_8g091690 33.445 299 176 8 2 298 80 357 3.93e-37 139
MS.gene54722.t1 MTR_1g035140 30.218 321 198 7 2 319 91 388 8.03e-37 138
MS.gene54722.t1 MTR_3g058240 29.595 321 203 6 2 319 55 355 9.51e-37 137
MS.gene54722.t1 MTR_5g094570 28.440 327 204 7 1 323 92 392 9.77e-37 138
MS.gene54722.t1 MTR_0171s0030 29.787 329 206 7 1 323 1 310 1.01e-36 136
MS.gene54722.t1 MTR_5g094520 28.135 327 205 6 1 323 18 318 1.41e-36 136
MS.gene54722.t1 MTR_5g094540 28.916 332 196 8 1 323 92 392 2.63e-36 137
MS.gene54722.t1 MTR_5g094660 27.301 326 208 5 1 323 92 391 5.28e-36 135
MS.gene54722.t1 MTR_8g073950 27.134 328 222 7 1 323 95 410 5.59e-36 136
MS.gene54722.t1 MTR_4g089020 29.321 324 206 7 2 323 83 385 1.24e-35 135
MS.gene54722.t1 MTR_5g023680 31.402 328 199 8 1 323 58 364 1.39e-35 134
MS.gene54722.t1 MTR_5g094520 28.135 327 205 6 1 323 123 423 1.67e-35 135
MS.gene54722.t1 MTR_3g467290 28.659 328 219 5 1 323 105 422 2.83e-35 134
MS.gene54722.t1 MTR_3g076550 30.000 330 187 10 1 323 88 380 4.75e-35 133
MS.gene54722.t1 MTR_0171s0020 28.615 325 215 5 1 323 89 398 4.76e-35 133
MS.gene54722.t1 MTR_4g104660 28.308 325 214 5 1 323 98 405 5.48e-35 133
MS.gene54722.t1 MTR_0059s0170 28.529 333 198 8 2 323 91 394 6.15e-35 133
MS.gene54722.t1 MTR_0171s0010 29.231 325 215 7 1 323 89 400 6.50e-35 133
MS.gene54722.t1 MTR_6g035100 28.704 324 204 6 1 323 90 387 1.48e-34 132
MS.gene54722.t1 MTR_6g462640 28.349 321 207 6 2 319 89 389 1.65e-34 132
MS.gene54722.t1 MTR_3g058250 28.972 321 205 7 2 319 89 389 1.68e-34 132
MS.gene54722.t1 MTR_3g058390 29.595 321 203 5 2 319 89 389 1.73e-34 132
MS.gene54722.t1 MTR_8g073960 26.524 328 224 7 1 323 99 414 3.25e-34 131
MS.gene54722.t1 MTR_4g089055 29.630 324 205 8 2 323 105 407 6.63e-34 130
MS.gene54722.t1 MTR_4g088195 28.981 314 195 8 14 323 102 391 1.12e-33 129
MS.gene54722.t1 MTR_3g058400 27.812 320 209 5 2 319 91 390 2.56e-33 128
MS.gene54722.t1 MTR_6g034965 28.704 324 204 8 1 323 90 387 3.38e-33 128
MS.gene54722.t1 MTR_5g072980 26.154 325 222 5 1 323 86 394 5.15e-33 127
MS.gene54722.t1 MTR_5g072930 26.154 325 222 5 1 323 86 394 5.15e-33 127
MS.gene54722.t1 MTR_5g094590 57.000 100 41 1 55 154 69 166 1.74e-32 119
MS.gene54722.t1 MTR_7g103450 27.914 326 217 7 2 323 96 407 2.25e-32 126
MS.gene54722.t1 MTR_4g088160 28.344 314 197 8 14 323 102 391 2.36e-32 126
MS.gene54722.t1 MTR_8g027040 29.846 325 200 11 1 323 139 437 3.56e-32 125
MS.gene54722.t1 MTR_3g465300 28.440 327 216 6 1 323 102 414 6.21e-32 125
MS.gene54722.t1 MTR_7g075610 29.664 327 209 7 1 323 86 395 1.15e-31 124
MS.gene54722.t1 MTR_5g073230 27.134 328 193 8 1 323 95 381 1.23e-31 124
MS.gene54722.t1 MTR_1g031700 26.168 321 218 4 1 321 86 387 1.76e-31 123
MS.gene54722.t1 MTR_4g088170 28.814 295 183 7 33 323 120 391 2.54e-31 123
MS.gene54722.t1 MTR_2g010530 31.498 327 193 8 1 323 87 386 4.09e-31 122
MS.gene54722.t1 MTR_8g046240 28.221 326 207 8 1 321 93 396 5.50e-31 122
MS.gene54722.t1 MTR_1g035190 28.571 322 205 6 2 319 74 374 5.70e-31 122
MS.gene54722.t1 MTR_5g045250 30.061 326 198 11 2 323 113 412 7.27e-31 122
MS.gene54722.t1 MTR_5g095220 29.063 320 195 11 8 323 71 362 1.22e-30 120
MS.gene54722.t1 MTR_3g467200 27.217 327 220 6 1 323 105 417 1.39e-30 121
MS.gene54722.t1 MTR_4g088420 56.522 92 40 0 232 323 31 122 2.07e-30 115
MS.gene54722.t1 MTR_5g073020 25.382 327 222 5 1 323 86 394 2.39e-30 120
MS.gene54722.t1 MTR_1g103670 26.769 325 215 6 1 323 86 389 2.77e-30 120
MS.gene54722.t1 MTR_1g116890 27.778 324 219 6 2 323 88 398 3.40e-30 120
MS.gene54722.t1 MTR_0638s0020 31.304 230 148 5 95 323 101 321 9.23e-30 117
MS.gene54722.t1 MTR_4g133760 29.052 327 172 10 1 323 18 288 2.33e-29 116
MS.gene54722.t1 MTR_5g007460 29.787 329 200 10 1 321 61 366 2.90e-29 117
MS.gene54722.t1 MTR_4g078110 27.640 322 198 6 1 321 80 367 2.90e-29 117
MS.gene54722.t1 MTR_1g442730 29.193 322 203 7 2 319 88 388 3.98e-29 117
MS.gene54722.t1 MTR_0554s0020 29.063 320 205 6 2 319 91 390 4.14e-29 117
MS.gene54722.t1 MTR_8g076390 26.006 323 210 8 1 306 99 409 9.38e-29 116
MS.gene54722.t1 MTR_7g075540 28.659 328 208 6 1 323 86 392 2.87e-28 114
MS.gene54722.t1 MTR_5g094840 28.834 326 203 9 1 322 97 397 3.29e-28 114
MS.gene54722.t1 MTR_5g007550 28.000 325 203 7 1 323 94 389 4.20e-28 114
MS.gene54722.t1 MTR_5g007450 28.875 329 195 8 1 323 94 389 1.08e-27 112
MS.gene54722.t1 MTR_3g467220 26.829 328 220 7 1 323 100 412 3.59e-27 111
MS.gene54722.t1 MTR_1g097220 30.435 299 178 8 9 302 123 396 6.87e-27 110
MS.gene54722.t1 MTR_1g103680 27.726 321 213 4 1 321 87 388 1.63e-26 109
MS.gene54722.t1 MTR_8g046210 28.283 297 194 7 1 296 93 371 2.67e-26 108
MS.gene54722.t1 MTR_0608s0010 25.938 320 202 7 1 319 86 371 4.24e-26 107
MS.gene54722.t1 MTR_7g075580 26.852 324 221 6 1 323 86 394 6.79e-26 107
MS.gene54722.t1 MTR_4g026030 35.616 219 128 7 108 323 28 236 7.70e-26 105
MS.gene54722.t1 MTR_1g055325 27.469 324 215 6 1 323 106 410 1.16e-25 107
MS.gene54722.t1 MTR_5g018500 57.831 83 34 1 242 323 2 84 1.33e-25 101
MS.gene54722.t1 MTR_3g077460 25.387 323 173 7 1 323 59 313 1.75e-25 105
MS.gene54722.t1 MTR_1g037370 28.308 325 208 8 2 323 84 386 2.27e-25 106
MS.gene54722.t1 MTR_8g076372 25.000 328 216 9 1 323 99 401 2.76e-25 106
MS.gene54722.t1 MTR_2g073420 27.134 328 211 5 1 323 96 400 8.09e-25 104
MS.gene54722.t1 MTR_1g097240 28.571 322 215 4 2 322 80 387 2.02e-24 103
MS.gene54722.t1 MTR_5g075450 27.469 324 212 9 1 319 86 391 5.09e-24 102
MS.gene54722.t1 MTR_6g084900 37.349 166 86 4 168 323 1 158 7.74e-24 99.0
MS.gene54722.t1 MTR_1g091023 25.000 328 216 7 1 323 86 388 2.74e-23 100
MS.gene54722.t1 MTR_8g104030 35.542 166 100 4 163 323 8 171 2.89e-23 97.4
MS.gene54722.t1 MTR_1g091003 24.695 328 217 6 1 323 86 388 3.22e-23 100
MS.gene54722.t1 MTR_1g091010 24.695 328 217 7 1 323 85 387 1.20e-22 98.6
MS.gene54722.t1 MTR_7g075390 29.141 326 209 7 1 321 86 394 3.55e-22 97.1
MS.gene54722.t1 MTR_4g062530 27.757 263 163 7 2 261 88 326 7.07e-22 95.9
MS.gene54722.t1 MTR_6g039630 27.895 190 116 5 1 189 87 256 7.19e-21 90.9
MS.gene54722.t1 MTR_8g080520 27.931 290 186 8 14 302 132 399 1.14e-20 92.8
MS.gene54722.t1 MTR_1g492820 24.458 323 220 9 1 319 100 402 3.07e-20 91.7
MS.gene54722.t1 MTR_0451s0010 31.847 157 102 3 168 323 62 214 3.23e-20 89.7
MS.gene54722.t1 MTR_1g111240 25.767 326 216 9 1 321 118 422 1.72e-19 89.4
MS.gene54722.t1 MTR_4g026080 43.478 92 52 0 232 323 1 92 1.74e-19 85.5
MS.gene54722.t1 MTR_8g104100 34.416 154 94 4 175 323 1 152 1.88e-19 86.7
MS.gene54722.t1 MTR_7g075600 25.168 298 203 5 1 295 86 366 2.62e-19 88.6
MS.gene54722.t1 MTR_4g025950 30.093 216 124 7 1 210 82 276 5.33e-19 86.3
MS.gene54722.t1 MTR_4g131830 25.697 323 193 9 14 319 101 393 1.11e-18 87.0
MS.gene54722.t1 MTR_2g073480 27.217 327 195 7 1 323 18 305 3.86e-18 84.7
MS.gene54722.t1 MTR_2g073440 27.217 327 195 7 1 323 85 372 6.14e-18 84.7
MS.gene54722.t1 MTR_4g026070 32.461 191 106 6 1 186 82 254 7.78e-18 82.8
MS.gene54722.t1 MTR_5g056720 25.857 321 186 6 1 321 49 317 3.48e-17 82.0
MS.gene54722.t1 MTR_1g031710 32.317 164 101 2 163 321 39 197 3.75e-17 80.9
MS.gene54722.t1 MTR_8g091680 27.391 230 132 4 96 323 147 343 7.66e-17 81.3
MS.gene54722.t1 MTR_1g107300 40.426 94 55 1 230 323 1 93 8.40e-17 78.2
MS.gene54722.t1 MTR_4g104570 39.130 92 56 0 232 323 1 92 8.52e-17 77.8
MS.gene54722.t1 MTR_1g107305 32.258 186 106 5 1 181 90 260 9.80e-17 80.5
MS.gene54722.t1 MTR_8g104080 30.061 163 90 5 2 161 89 230 6.47e-15 74.3
MS.gene54722.t1 MTR_1750s0010 36.957 92 58 0 232 323 2 93 7.00e-15 71.6
MS.gene54722.t1 MTR_3g057870 40.000 85 51 0 235 319 42 126 2.31e-14 72.0
MS.gene54722.t1 MTR_1g035940 30.909 165 110 2 163 323 238 402 3.29e-14 73.6
MS.gene54722.t1 MTR_8g008530 23.054 334 210 12 1 322 116 414 5.25e-13 69.7
MS.gene54722.t1 MTR_7g096340 29.193 161 102 4 163 323 243 391 5.69e-13 69.7
MS.gene54722.t1 MTR_8g035780 27.404 208 132 6 128 322 203 404 6.81e-13 69.7
MS.gene54722.t1 MTR_6g004600 27.711 249 158 8 90 319 161 406 7.21e-13 69.3
MS.gene54722.t1 MTR_4g012320 35.849 106 64 1 222 323 13 118 7.88e-13 67.4
MS.gene54722.t1 MTR_8g063280 23.353 334 209 9 13 322 78 388 1.32e-12 68.6
MS.gene54722.t1 MTR_8g035760 22.483 298 203 7 34 322 126 404 2.28e-12 67.8
MS.gene54722.t1 MTR_1g090987 39.726 73 44 0 251 323 4 76 2.63e-12 64.7
MS.gene54722.t1 MTR_1g035830 29.586 169 107 4 163 323 238 402 2.88e-12 67.8
MS.gene54722.t1 MTR_5g034900 22.388 335 230 9 1 319 86 406 6.20e-12 66.6
MS.gene54722.t1 MTR_6g004670 29.452 146 94 4 163 302 237 379 7.87e-12 66.2
MS.gene54722.t1 MTR_8g035810 25.237 317 186 12 31 322 114 404 1.35e-11 65.5
MS.gene54722.t1 MTR_5g026520 19.394 330 242 7 1 323 87 399 1.40e-11 65.5
MS.gene54722.t1 MTR_8g035810 25.237 317 186 12 31 322 114 404 1.58e-11 65.5
MS.gene54722.t1 MTR_7g079440 32.000 125 77 3 198 322 425 541 2.21e-11 65.1
MS.gene54722.t1 MTR_7g079440 31.746 126 78 3 197 322 424 541 2.32e-11 65.1
MS.gene54722.t1 MTR_6g004610 28.049 164 113 3 163 323 197 358 7.11e-11 63.2
MS.gene54722.t1 MTR_1g102220 33.333 108 61 2 225 322 293 399 9.76e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54722.t1 AT4G31940 46.646 328 165 4 1 323 87 409 1.03e-103 313
MS.gene54722.t1 AT4G31970 45.872 327 168 4 1 323 87 408 1.22e-100 306
MS.gene54722.t1 AT3G25180 46.440 323 157 7 2 323 94 401 1.51e-83 261
MS.gene54722.t1 AT4G31950 41.768 328 169 6 1 323 87 397 9.45e-82 257
MS.gene54722.t1 AT3G25180 46.053 304 148 7 2 304 94 382 9.05e-78 243
MS.gene54722.t1 AT2G25160 42.308 312 171 6 1 311 88 391 7.17e-73 231
MS.gene54722.t1 AT2G25160 41.718 326 179 7 1 323 88 405 2.08e-72 233
MS.gene54722.t1 AT5G07990 36.585 328 181 6 1 323 85 390 5.32e-63 208
MS.gene54722.t1 AT4G37400 37.654 324 178 7 1 323 83 383 2.05e-60 201
MS.gene54722.t1 AT4G37340 35.604 323 189 5 1 323 85 388 3.26e-59 198
MS.gene54722.t1 AT4G37320 36.000 325 184 7 1 323 86 388 1.59e-58 196
MS.gene54722.t1 AT4G37370 34.675 323 191 5 1 323 85 387 8.15e-58 194
MS.gene54722.t1 AT2G23190 35.494 324 187 6 1 323 130 432 1.10e-57 195
MS.gene54722.t1 AT5G36220 35.093 322 189 5 2 323 93 394 1.27e-56 191
MS.gene54722.t1 AT4G37330 35.692 325 182 7 1 323 86 385 1.95e-56 190
MS.gene54722.t1 AT4G37430 35.185 324 194 7 1 323 80 388 4.54e-55 187
MS.gene54722.t1 AT4G37360 34.985 323 191 6 1 323 85 388 5.20e-54 184
MS.gene54722.t1 AT1G01280 32.087 321 207 4 3 323 86 395 9.27e-54 184
MS.gene54722.t1 AT5G57220 34.877 324 188 6 1 323 82 383 2.04e-53 182
MS.gene54722.t1 AT2G23220 32.508 323 198 5 1 323 101 403 3.32e-53 182
MS.gene54722.t1 AT3G28740 34.985 323 190 5 1 323 94 396 4.28e-53 182
MS.gene54722.t1 AT4G37310 32.432 333 193 8 2 323 85 396 6.17e-53 182
MS.gene54722.t1 AT4G37410 34.568 324 190 7 1 323 83 385 1.17e-52 181
MS.gene54722.t1 AT1G66540 35.862 290 167 6 35 323 4 275 2.82e-50 171
MS.gene54722.t1 AT5G67310 33.962 318 185 8 9 323 104 399 7.59e-49 171
MS.gene54722.t1 AT5G10610 32.710 321 192 8 3 321 87 385 2.40e-46 164
MS.gene54722.t1 AT2G40890 30.650 323 210 6 1 323 79 387 1.05e-45 162
MS.gene54722.t1 AT5G10600 31.288 326 196 7 3 323 101 403 1.01e-44 160
MS.gene54722.t1 AT3G48270 29.755 326 197 9 1 323 83 379 1.16e-42 154
MS.gene54722.t1 AT3G48300 30.154 325 195 8 2 323 82 377 4.04e-42 152
MS.gene54722.t1 AT3G48300 30.154 325 195 8 2 323 84 379 4.17e-42 152
MS.gene54722.t1 AT3G48280 29.846 325 199 7 1 323 82 379 5.42e-42 152
MS.gene54722.t1 AT4G13310 29.630 324 208 4 1 323 84 388 7.68e-41 147
MS.gene54722.t1 AT1G13080 30.240 334 197 10 2 323 84 393 8.59e-41 149
MS.gene54722.t1 AT3G48310 29.448 326 198 8 1 323 84 380 9.62e-41 149
MS.gene54722.t1 AT4G36220 29.851 335 199 8 1 321 92 404 3.81e-40 147
MS.gene54722.t1 AT4G13310 29.630 324 208 4 1 323 84 388 6.19e-40 146
MS.gene54722.t1 AT4G12300 30.909 330 200 6 1 323 94 402 1.11e-39 146
MS.gene54722.t1 AT3G48290 30.769 325 193 9 2 323 86 381 2.19e-39 145
MS.gene54722.t1 AT2G22330 30.211 331 206 7 1 323 113 426 5.91e-39 144
MS.gene54722.t1 AT2G42250 31.677 322 202 6 2 323 94 397 7.76e-39 144
MS.gene54722.t1 AT2G22330 30.211 331 206 7 1 323 136 449 8.88e-39 144
MS.gene54722.t1 AT5G06900 30.650 323 207 6 1 323 86 391 3.57e-38 142
MS.gene54722.t1 AT1G66540 37.719 228 129 5 97 323 1 216 4.68e-38 138
MS.gene54722.t1 AT4G12320 29.394 330 207 6 1 323 94 404 8.40e-38 141
MS.gene54722.t1 AT4G13290 28.395 324 204 6 1 323 85 381 4.47e-37 139
MS.gene54722.t1 AT3G48320 31.595 326 191 9 1 323 84 380 1.72e-36 137
MS.gene54722.t1 AT1G50520 28.615 325 211 6 1 323 96 401 2.42e-36 137
MS.gene54722.t1 AT5G36220 35.652 230 136 4 94 323 31 248 1.55e-35 132
MS.gene54722.t1 AT4G31500 27.914 326 212 7 1 323 82 387 3.16e-35 134
MS.gene54722.t1 AT3G20120 28.615 325 209 6 1 323 94 397 3.44e-35 134
MS.gene54722.t1 AT5G44620 28.571 329 209 7 1 323 98 406 3.77e-35 134
MS.gene54722.t1 AT4G39950 29.003 331 210 7 1 323 111 424 8.03e-35 133
MS.gene54722.t1 AT4G39950 29.003 331 210 7 1 323 151 464 1.18e-34 133
MS.gene54722.t1 AT3G48290 28.490 351 193 10 2 323 86 407 3.32e-34 131
MS.gene54722.t1 AT5G57260 28.485 330 208 8 2 323 83 392 6.27e-34 130
MS.gene54722.t1 AT5G04330 26.364 330 218 9 1 323 84 395 1.05e-33 130
MS.gene54722.t1 AT4G15330 29.012 324 209 5 1 323 91 394 1.32e-33 129
MS.gene54722.t1 AT3G32047 29.755 326 203 7 1 323 95 397 1.46e-33 129
MS.gene54722.t1 AT2G30770 26.154 325 214 7 2 323 86 387 2.06e-33 129
MS.gene54722.t1 AT4G12310 27.273 330 214 5 1 323 96 406 4.06e-33 128
MS.gene54722.t1 AT2G24180 26.074 326 218 5 2 323 89 395 4.55e-33 128
MS.gene54722.t1 AT1G74550 26.769 325 207 7 1 323 79 374 5.64e-33 127
MS.gene54722.t1 AT2G14100 28.528 326 208 7 1 323 96 399 8.32e-33 127
MS.gene54722.t1 AT5G42580 30.650 323 193 7 1 323 92 383 8.46e-33 127
MS.gene54722.t1 AT3G26320 27.726 321 206 9 2 317 84 383 9.26e-33 127
MS.gene54722.t1 AT1G74110 27.914 326 215 9 2 323 120 429 1.52e-32 127
MS.gene54722.t1 AT3G20130 26.462 325 216 6 1 323 95 398 1.79e-32 126
MS.gene54722.t1 AT2G27000 28.173 323 214 5 1 323 92 396 2.30e-32 126
MS.gene54722.t1 AT3G26270 28.788 330 207 8 2 323 85 394 3.63e-32 125
MS.gene54722.t1 AT4G15330 28.797 316 204 5 9 323 71 366 5.36e-32 124
MS.gene54722.t1 AT3G26280 26.852 324 218 5 2 321 85 393 5.85e-32 125
MS.gene54722.t1 AT3G26300 26.994 326 214 8 2 323 84 389 6.60e-32 124
MS.gene54722.t1 AT5G05260 25.836 329 228 6 1 323 96 414 7.20e-32 125
MS.gene54722.t1 AT3G20090 27.469 324 215 6 1 323 96 400 7.86e-32 124
MS.gene54722.t1 AT3G26280 26.852 324 218 5 2 321 102 410 8.14e-32 124
MS.gene54722.t1 AT5G25120 29.573 328 201 8 2 323 82 385 2.27e-31 123
MS.gene54722.t1 AT3G20960 28.086 324 213 6 1 323 94 398 4.04e-31 122
MS.gene54722.t1 AT3G20130 26.101 318 212 6 8 323 74 370 6.55e-31 122
MS.gene54722.t1 AT3G20100 26.935 323 218 5 1 323 94 398 6.98e-31 122
MS.gene54722.t1 AT3G20940 27.469 324 215 5 1 323 95 399 7.06e-31 122
MS.gene54722.t1 AT5G06905 28.483 323 213 7 2 323 84 389 9.92e-31 121
MS.gene54722.t1 AT5G25180 28.440 327 206 8 2 323 82 385 1.53e-30 120
MS.gene54722.t1 AT1G13110 27.108 332 211 9 2 323 85 395 1.55e-30 120
MS.gene54722.t1 AT3G26330 26.994 326 214 9 2 323 84 389 1.82e-30 120
MS.gene54722.t1 AT4G22710 27.554 323 218 6 1 323 106 412 1.84e-30 120
MS.gene54722.t1 AT1G50560 29.448 326 208 7 1 323 96 402 2.07e-30 120
MS.gene54722.t1 AT3G26310 25.672 335 207 6 2 323 83 388 2.45e-30 120
MS.gene54722.t1 AT3G20950 28.221 326 209 7 1 323 99 402 2.57e-30 120
MS.gene54722.t1 AT4G22690 27.554 323 218 6 1 323 137 443 2.84e-30 120
MS.gene54722.t1 AT3G26210 26.687 326 218 10 2 323 84 392 3.86e-30 119
MS.gene54722.t1 AT4G15360 27.660 329 209 8 1 323 93 398 7.94e-30 119
MS.gene54722.t1 AT2G45570 27.964 329 211 10 2 323 91 400 1.46e-29 118
MS.gene54722.t1 AT4G13770 28.354 328 210 9 1 323 83 390 1.61e-29 118
MS.gene54722.t1 AT3G20960 27.885 312 205 6 13 323 3 295 2.12e-29 116
MS.gene54722.t1 AT1G13090 27.879 330 209 11 2 323 81 389 4.28e-29 116
MS.gene54722.t1 AT3G20140 26.852 324 216 5 1 323 95 398 4.54e-29 117
MS.gene54722.t1 AT3G20110 25.816 337 203 7 1 323 92 395 5.15e-29 116
MS.gene54722.t1 AT5G25140 29.052 327 204 8 2 323 82 385 7.00e-29 116
MS.gene54722.t1 AT2G46660 29.012 324 200 9 1 323 125 419 1.27e-28 115
MS.gene54722.t1 AT3G26180 26.444 329 209 7 2 319 83 389 1.35e-28 115
MS.gene54722.t1 AT5G47990 27.160 324 213 6 2 323 96 398 1.45e-28 115
MS.gene54722.t1 AT4G15350 27.778 324 214 5 1 323 88 392 2.29e-28 115
MS.gene54722.t1 AT4G12330 25.994 327 215 7 3 323 100 405 2.79e-28 114
MS.gene54722.t1 AT3G26170 26.970 330 206 9 2 319 83 389 2.81e-28 114
MS.gene54722.t1 AT2G30750 27.385 325 210 7 2 323 86 387 3.05e-28 114
MS.gene54722.t1 AT1G11610 27.077 325 211 8 2 323 86 387 3.24e-28 114
MS.gene54722.t1 AT1G11610 27.077 325 211 8 2 323 86 387 3.67e-28 114
MS.gene54722.t1 AT1G13710 28.704 324 210 11 2 323 104 408 1.39e-27 112
MS.gene54722.t1 AT3G26290 26.687 326 215 6 2 323 84 389 3.43e-27 111
MS.gene54722.t1 AT3G26290 26.687 326 215 6 2 323 97 402 4.14e-27 111
MS.gene54722.t1 AT5G05260 24.924 329 199 6 1 323 96 382 5.74e-27 110
MS.gene54722.t1 AT3G20120 27.660 282 181 6 44 323 1 261 8.90e-27 108
MS.gene54722.t1 AT3G20120 27.660 282 181 6 44 323 1 261 8.90e-27 108
MS.gene54722.t1 AT3G20120 27.660 282 181 6 44 323 1 261 8.90e-27 108
MS.gene54722.t1 AT2G45550 25.309 324 225 5 2 323 91 399 9.17e-27 110
MS.gene54722.t1 AT1G74540 26.154 325 215 7 1 323 79 380 1.73e-26 109
MS.gene54722.t1 AT3G61880 29.141 326 201 9 1 323 121 419 2.15e-26 109
MS.gene54722.t1 AT2G45560 26.462 325 220 7 2 323 91 399 2.56e-26 109
MS.gene54722.t1 AT3G61880 29.141 326 201 9 1 323 121 419 3.42e-26 108
MS.gene54722.t1 AT3G20080 27.160 324 216 6 1 323 95 399 3.59e-26 108
MS.gene54722.t1 AT3G20080 27.160 324 216 6 1 323 95 399 3.59e-26 108
MS.gene54722.t1 AT1G28430 24.768 323 222 4 2 323 94 396 3.77e-26 108
MS.gene54722.t1 AT5G25130 26.706 337 199 7 2 323 82 385 6.82e-26 107
MS.gene54722.t1 AT5G35715 26.126 333 208 10 2 321 19 326 1.27e-25 106
MS.gene54722.t1 AT1G79370 26.100 341 224 9 1 323 95 425 1.73e-25 107
MS.gene54722.t1 AT1G01190 27.077 325 204 10 1 323 133 426 2.30e-25 106
MS.gene54722.t1 AT1G01190 27.077 325 204 10 1 323 128 421 2.68e-25 106
MS.gene54722.t1 AT1G58260 25.532 329 227 6 1 323 92 408 2.86e-25 106
MS.gene54722.t1 AT1G33720 26.625 323 220 9 3 323 92 399 3.29e-25 105
MS.gene54722.t1 AT5G24950 24.848 330 215 9 1 323 84 387 4.02e-25 105
MS.gene54722.t1 AT3G26230 28.313 332 209 13 2 323 79 391 5.27e-25 105
MS.gene54722.t1 AT5G09970 30.137 292 181 10 14 302 135 406 6.08e-25 105
MS.gene54722.t1 AT2G05180 27.914 326 211 7 1 323 94 398 1.66e-24 103
MS.gene54722.t1 AT2G02580 25.767 326 218 6 2 323 84 389 1.70e-24 103
MS.gene54722.t1 AT1G16400 25.507 345 208 10 1 323 99 416 4.20e-24 102
MS.gene54722.t1 AT1G16410 24.242 330 231 6 1 323 100 417 7.84e-24 102
MS.gene54722.t1 AT4G15380 27.964 329 202 9 1 323 95 394 8.52e-24 102
MS.gene54722.t1 AT3G26200 25.460 326 223 7 2 323 81 390 3.56e-23 100
MS.gene54722.t1 AT5G04660 24.620 329 218 10 1 322 96 401 3.67e-23 100
MS.gene54722.t1 AT1G13080 29.249 253 152 9 83 323 38 275 6.01e-23 98.2
MS.gene54722.t1 AT3G53280 28.182 330 207 10 2 323 81 388 6.82e-23 99.4
MS.gene54722.t1 AT5G24960 27.795 331 204 8 1 323 85 388 7.99e-23 98.2
MS.gene54722.t1 AT3G26190 25.758 330 217 9 2 323 81 390 9.47e-23 99.0
MS.gene54722.t1 AT1G16410 23.926 326 229 6 1 319 100 413 1.18e-22 97.8
MS.gene54722.t1 AT5G24960 27.795 331 204 8 1 323 85 388 1.38e-22 98.2
MS.gene54722.t1 AT3G61040 28.197 305 191 7 2 302 86 366 1.39e-22 97.4
MS.gene54722.t1 AT1G33720 27.046 281 189 8 44 323 2 267 2.57e-22 96.7
MS.gene54722.t1 AT1G33720 27.046 281 189 8 44 323 2 267 2.57e-22 96.7
MS.gene54722.t1 AT1G33720 27.046 281 189 8 44 323 2 267 2.57e-22 96.7
MS.gene54722.t1 AT3G61040 28.197 305 191 7 2 302 86 366 3.65e-22 97.1
MS.gene54722.t1 AT2G45580 27.961 304 202 5 2 302 91 380 3.99e-22 96.3
MS.gene54722.t1 AT3G20090 25.979 281 188 6 44 323 1 262 6.66e-22 95.5
MS.gene54722.t1 AT5G42590 25.538 325 219 5 1 323 84 387 7.22e-22 96.3
MS.gene54722.t1 AT2G45580 27.961 304 202 5 2 302 91 380 7.77e-22 96.3
MS.gene54722.t1 AT3G26220 27.463 335 208 10 2 323 82 394 8.62e-22 95.9
MS.gene54722.t1 AT1G13100 25.305 328 223 9 2 323 78 389 1.05e-21 95.9
MS.gene54722.t1 AT3G44250 28.354 328 210 10 2 323 81 389 1.71e-21 95.1
MS.gene54722.t1 AT3G10560 24.251 334 209 11 1 322 101 402 3.20e-21 94.4
MS.gene54722.t1 AT3G52970 25.538 325 221 7 1 312 89 405 3.29e-21 94.4
MS.gene54722.t1 AT1G33730 28.000 275 180 8 51 323 5 263 7.76e-21 92.0
MS.gene54722.t1 AT1G33730 28.000 275 180 8 51 323 5 263 7.76e-21 92.0
MS.gene54722.t1 AT3G52970 25.868 317 216 7 1 312 89 391 9.45e-21 93.2
MS.gene54722.t1 AT5G04630 24.688 320 214 9 6 323 105 399 9.71e-21 93.2
MS.gene54722.t1 AT3G26150 23.636 330 217 7 2 319 83 389 2.35e-20 92.0
MS.gene54722.t1 AT3G26160 22.727 330 220 7 2 319 83 389 3.27e-20 91.3
MS.gene54722.t1 AT2G30490 25.617 324 217 9 1 319 86 390 5.64e-20 90.9
MS.gene54722.t1 AT5G35917 21.166 326 234 5 1 323 98 403 1.65e-19 89.4
MS.gene54722.t1 AT3G26830 23.724 333 219 9 2 323 81 389 2.93e-19 88.6
MS.gene54722.t1 AT3G20935 30.899 178 99 4 166 323 51 224 4.88e-19 87.0
MS.gene54722.t1 AT1G33720 25.246 305 189 9 44 323 2 292 7.29e-19 87.0
MS.gene54722.t1 AT3G20080 32.911 158 101 2 166 323 110 262 1.34e-18 85.9
MS.gene54722.t1 AT3G20080 32.911 158 101 2 166 323 110 262 1.34e-18 85.9
MS.gene54722.t1 AT3G20080 32.911 158 101 2 166 323 110 262 1.34e-18 85.9
MS.gene54722.t1 AT3G20080 32.911 158 101 2 166 323 110 262 1.34e-18 85.9
MS.gene54722.t1 AT2G27010 41.414 99 57 1 225 323 277 374 1.75e-18 86.3
MS.gene54722.t1 AT2G45580 36.025 161 98 2 145 302 68 226 7.60e-18 83.6
MS.gene54722.t1 AT4G20240 24.540 326 219 8 1 323 85 386 1.50e-17 83.2
MS.gene54722.t1 AT4G20240 24.540 326 219 8 1 323 85 386 1.80e-17 83.2
MS.gene54722.t1 AT3G10570 24.601 313 211 8 14 322 111 402 5.20e-17 82.0
MS.gene54722.t1 AT4G39510 25.862 290 196 10 41 323 123 400 3.63e-16 79.3
MS.gene54722.t1 AT1G11600 26.036 338 201 10 4 323 93 399 2.53e-14 73.9
MS.gene54722.t1 AT3G53300 24.854 342 201 12 2 321 81 388 3.78e-14 73.2
MS.gene54722.t1 AT2G21910 25.431 232 164 6 96 321 170 398 5.67e-14 72.8
MS.gene54722.t1 AT1G64930 25.150 334 220 11 1 323 87 401 8.49e-14 72.4
MS.gene54722.t1 AT3G26180 28.750 160 100 4 166 319 104 255 1.67e-13 70.9
MS.gene54722.t1 AT1G64940 24.179 335 223 12 1 323 88 403 1.70e-13 71.2
MS.gene54722.t1 AT2G12190 24.478 335 222 12 1 323 87 402 1.80e-12 68.2
MS.gene54722.t1 AT1G13090 35.366 82 53 0 2 83 81 162 4.18e-12 66.2
MS.gene54722.t1 AT4G39490 24.277 346 186 16 5 302 73 390 5.00e-12 67.0
MS.gene54722.t1 AT1G64950 23.795 332 223 11 1 321 87 399 8.14e-12 66.2
MS.gene54722.t1 AT2G26710 26.038 265 164 7 66 323 172 411 2.03e-11 65.1
MS.gene54722.t1 AT4G39500 22.222 234 173 5 96 323 181 411 2.14e-11 65.1
MS.gene54722.t1 AT4G39500 22.222 234 173 5 96 323 131 361 2.48e-11 64.7
MS.gene54722.t1 AT5G25900 22.630 327 228 8 2 323 97 403 3.24e-11 64.3

Find 62 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTTGCAATCTTGCGAATT+TGG 0.199139 6.1:-4130575 None:intergenic
AGGTGGTTACCATGTTAAAA+AGG 0.212904 6.1:+4131873 MS.gene54722:CDS
TGTTTGAATTCGTTTGATTT+TGG 0.251850 6.1:+4130912 MS.gene54722:CDS
CGCGAACATGTTGTTGTTGT+TGG 0.265665 6.1:-4130623 None:intergenic
GTGCCGGTGGATACAATCTT+AGG 0.282278 6.1:-4131810 None:intergenic
AAAGAATTGGATAAAATTAC+AGG 0.286009 6.1:+4130966 MS.gene54722:CDS
GTTGTTGGAAAGAGATATTT+TGG 0.294196 6.1:+4130786 MS.gene54722:CDS
CTCAGGATCTCATGAATTCT+TGG 0.302236 6.1:+4131837 MS.gene54722:CDS
TTGCGAATTTGGCGCCAATA+TGG 0.312332 6.1:-4130564 None:intergenic
ACAAAACACTTGGCCTATAA+TGG 0.319622 6.1:+4130513 MS.gene54722:CDS
GAAAGAAACTTCTAAAGAAT+TGG 0.322950 6.1:+4130953 MS.gene54722:CDS
ACCGAACATAGCTCCATTAT+AGG 0.327243 6.1:-4130526 None:intergenic
TTAAAGAGCTATTCGATGTT+TGG 0.333819 6.1:+4130667 MS.gene54722:CDS
TGAAGGAGCATCGCCATAAA+AGG 0.336416 6.1:+4130997 MS.gene54722:CDS
TTGTTACTTTCATTGCTTGA+TGG 0.360980 6.1:+4131065 MS.gene54722:CDS
GCCTATAATGGAGCTATGTT+CGG 0.366159 6.1:+4130525 MS.gene54722:CDS
TTCTTGGAGAATTGTACTTT+AGG 0.374516 6.1:+4131853 MS.gene54722:CDS
TTGCACCCTACGGTCCATAT+TGG 0.385749 6.1:+4130550 MS.gene54722:CDS
TTCGTTAAATTATGTGTTGA+CGG 0.391967 6.1:+4130713 MS.gene54722:CDS
AATGAGATGATGCGTTTGTT+TGG 0.400388 6.1:+4130861 MS.gene54722:CDS
CTTGATGGAACAACTATTGA+AGG 0.405418 6.1:+4131080 MS.gene54722:CDS
TATCCACCGGCACCTCTCTC+AGG 0.410494 6.1:+4131820 MS.gene54722:CDS
GCGTTTGTTTGGGATAATTT+CGG 0.413057 6.1:+4130872 MS.gene54722:CDS
ATGATTCTTCGAATGGTTGT+TGG 0.418632 6.1:+4130771 MS.gene54722:CDS
TAATTAGTGTTACCCTTACA+TGG 0.424677 6.1:+4131647 MS.gene54722:CDS
AATTCGCAAGATTGCAACCT+TGG 0.435597 6.1:+4130578 MS.gene54722:CDS
ATTGAATAATCCTCTCGTAT+TGG 0.436837 6.1:+4131684 MS.gene54722:CDS
GCAAACATAGTGCCCATGTA+AGG 0.441748 6.1:-4131660 None:intergenic
TCGATGTTTGGTCTAGCAAA+AGG 0.448165 6.1:+4130679 MS.gene54722:CDS
GAAGAACTTGATAATGAAGT+TGG 0.448437 6.1:+4131718 MS.gene54722:CDS
ATGAGATGATGCGTTTGTTT+GGG 0.451916 6.1:+4130862 MS.gene54722:CDS
TATTCGCAGACAATATTTGT+TGG 0.466690 6.1:+4131613 MS.gene54722:intron
CATCATAAAAGCCACGGTAT+TGG 0.469379 6.1:+4131118 MS.gene54722:CDS
TTTCAACATGATTCTTCGAA+TGG 0.486268 6.1:+4130764 MS.gene54722:CDS
TCAAGATGATCAAGACATCA+TGG 0.516480 6.1:+4131040 MS.gene54722:CDS
AATTACAGGTGAGTGGTTGA+AGG 0.518299 6.1:+4130980 MS.gene54722:CDS
CGAGTCAGATATAAGCAAGT+TGG 0.527790 6.1:+4131759 MS.gene54722:CDS
CAACAATTGGGAAATGGCTA+AGG 0.528037 6.1:+4130437 None:intergenic
GCTTGTTTCGACAAAACACT+TGG 0.535328 6.1:+4130503 MS.gene54722:CDS
TGCCGGTGGATACAATCTTA+GGG 0.538609 6.1:-4131809 None:intergenic
TTGGAGAATTGTACTTTAGG+TGG 0.539988 6.1:+4131856 MS.gene54722:CDS
TGAGATCCTGAGAGAGGTGC+CGG 0.553363 6.1:-4131826 None:intergenic
TCGCAGACAATATTTGTTGG+AGG 0.553546 6.1:+4131616 MS.gene54722:intron
TTTGTTTGGGATAATTTCGG+TGG 0.554459 6.1:+4130875 MS.gene54722:CDS
ACTGTTGTTGAGGAAGAAGA+AGG 0.562801 6.1:+4130816 MS.gene54722:CDS
TTGGCGCCAATATGGACCGT+AGG 0.573877 6.1:-4130556 None:intergenic
TGGATAAAATTACAGGTGAG+TGG 0.585315 6.1:+4130973 MS.gene54722:CDS
CAAACATAGTGCCCATGTAA+GGG 0.586371 6.1:-4131659 None:intergenic
TGGCGCCAATATGGACCGTA+GGG 0.588444 6.1:-4130555 None:intergenic
CAAGATGATCAAGACATCAT+GGG 0.596432 6.1:+4131041 MS.gene54722:CDS
TTGATGGAACAACTATTGAA+GGG 0.596815 6.1:+4131081 MS.gene54722:CDS
AACCCTAAGATTGTATCCAC+CGG 0.606140 6.1:+4131807 MS.gene54722:CDS
TTGTTTGGGATAATTTCGGT+GGG 0.612636 6.1:+4130876 MS.gene54722:CDS
TGTTGACGGATTTGAAGCAA+TGG 0.619222 6.1:+4130727 MS.gene54722:CDS
TCGATTCGTTAAGATCTCCA+AGG 0.629664 6.1:-4130595 None:intergenic
TGATACCATCATAAAAGCCA+CGG 0.640741 6.1:+4131112 MS.gene54722:CDS
GATCCTGAGAGAGGTGCCGG+TGG 0.641835 6.1:-4131823 None:intergenic
AATTAGTGTTACCCTTACAT+GGG 0.646514 6.1:+4131648 MS.gene54722:CDS
AAATCAAACGAATTCAAACA+AGG 0.653161 6.1:-4130909 None:intergenic
AATTCATGAGATCCTGAGAG+AGG 0.663808 6.1:-4131832 None:intergenic
ATGTTTCACTACAAACGACA+AGG 0.693607 6.1:+4130461 MS.gene54722:CDS
GCATATACATACCAATACCG+TGG 0.714761 6.1:-4131129 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATAAACAACTTATTA+AGG + chr6.1:4131579-4131598 MS.gene54722:intron 15.0%
!!! AACAATTTTCAAATTTTGAA+GGG + chr6.1:4131338-4131357 MS.gene54722:intron 15.0%
!!! ATATTGTTATTAAGAAATAG+AGG + chr6.1:4131426-4131445 MS.gene54722:intron 15.0%
!!! TATTTTTATAAGTCCTTTTA+TGG - chr6.1:4131013-4131032 None:intergenic 15.0%
!! AAAGAATTGGATAAAATTAC+AGG + chr6.1:4130966-4130985 MS.gene54722:CDS 20.0%
!! AGGACTTATAAAAATATTGA+TGG + chr6.1:4131017-4131036 MS.gene54722:CDS 20.0%
!!! AGAAAATGAACAATTTTGAA+AGG + chr6.1:4131309-4131328 MS.gene54722:intron 20.0%
!!! AGTGATTTTCTCAAAATATA+TGG - chr6.1:4131243-4131262 None:intergenic 20.0%
!!! CTATTTTATTGAAAATGATG+AGG - chr6.1:4131403-4131422 None:intergenic 20.0%
!!! GAACAATTTTCAAATTTTGA+AGG + chr6.1:4131337-4131356 MS.gene54722:intron 20.0%
! AAATCAAACGAATTCAAACA+AGG - chr6.1:4130912-4130931 None:intergenic 25.0%
! ATATGTTACTCAAAATAGTG+AGG + chr6.1:4131459-4131478 MS.gene54722:intron 25.0%
! TAGCGAAATTACTCATTAAA+AGG + chr6.1:4131546-4131565 MS.gene54722:intron 25.0%
! TATGTTACTCAAAATAGTGA+GGG + chr6.1:4131460-4131479 MS.gene54722:intron 25.0%
! TTCGTTAAATTATGTGTTGA+CGG + chr6.1:4130713-4130732 MS.gene54722:CDS 25.0%
!! AGGGAATGAACAATTTTTAA+AGG - chr6.1:4131272-4131291 None:intergenic 25.0%
!! GAAAGAAACTTCTAAAGAAT+TGG + chr6.1:4130953-4130972 MS.gene54722:CDS 25.0%
!! GGGAATGAACAATTTTTAAA+GGG - chr6.1:4131271-4131290 None:intergenic 25.0%
!!! TGTTTGAATTCGTTTGATTT+TGG + chr6.1:4130912-4130931 MS.gene54722:CDS 25.0%
AATTAGTGTTACCCTTACAT+GGG + chr6.1:4131648-4131667 MS.gene54722:CDS 30.0%
ATTGAATAATCCTCTCGTAT+TGG + chr6.1:4131684-4131703 MS.gene54722:CDS 30.0%
CGAAATTACTCATTAAAAGG+TGG + chr6.1:4131549-4131568 MS.gene54722:intron 30.0%
TAATTAGTGTTACCCTTACA+TGG + chr6.1:4131647-4131666 MS.gene54722:CDS 30.0%
TATTCGCAGACAATATTTGT+TGG + chr6.1:4131613-4131632 MS.gene54722:intron 30.0%
TTAAAGAGCTATTCGATGTT+TGG + chr6.1:4130667-4130686 MS.gene54722:CDS 30.0%
TTCTTGGAGAATTGTACTTT+AGG + chr6.1:4131853-4131872 MS.gene54722:CDS 30.0%
TTGATGGAACAACTATTGAA+GGG + chr6.1:4131081-4131100 MS.gene54722:CDS 30.0%
TTTCAACATGATTCTTCGAA+TGG + chr6.1:4130764-4130783 MS.gene54722:CDS 30.0%
! GTTGTTGGAAAGAGATATTT+TGG + chr6.1:4130786-4130805 MS.gene54722:CDS 30.0%
!! GAAGAACTTGATAATGAAGT+TGG + chr6.1:4131718-4131737 MS.gene54722:CDS 30.0%
!! TTGAATTCGTTTGATTTTGG+TGG + chr6.1:4130915-4130934 MS.gene54722:CDS 30.0%
!! TTGTTACTTTCATTGCTTGA+TGG + chr6.1:4131065-4131084 MS.gene54722:CDS 30.0%
AATGAGATGATGCGTTTGTT+TGG + chr6.1:4130861-4130880 MS.gene54722:CDS 35.0%
ACAAAACACTTGGCCTATAA+TGG + chr6.1:4130513-4130532 MS.gene54722:CDS 35.0%
AGGTGGTTACCATGTTAAAA+AGG + chr6.1:4131873-4131892 MS.gene54722:CDS 35.0%
ATGAGATGATGCGTTTGTTT+GGG + chr6.1:4130862-4130881 MS.gene54722:CDS 35.0%
ATGATTCTTCGAATGGTTGT+TGG + chr6.1:4130771-4130790 MS.gene54722:CDS 35.0%
ATGTTTCACTACAAACGACA+AGG + chr6.1:4130461-4130480 MS.gene54722:CDS 35.0%
CAAGATGATCAAGACATCAT+GGG + chr6.1:4131041-4131060 MS.gene54722:CDS 35.0%
CCATCTTAAGACTCTTCTTT+AGG - chr6.1:4131379-4131398 None:intergenic 35.0%
CCTAAAGAAGAGTCTTAAGA+TGG + chr6.1:4131376-4131395 MS.gene54722:intron 35.0%
CTAAACTCTAGCTGAGTTAA+GGG - chr6.1:4131291-4131310 None:intergenic 35.0%
CTTGATGGAACAACTATTGA+AGG + chr6.1:4131080-4131099 MS.gene54722:CDS 35.0%
GGTGGTTACCATGTTAAAAA+GGG + chr6.1:4131874-4131893 MS.gene54722:CDS 35.0%
TCAAGATGATCAAGACATCA+TGG + chr6.1:4131040-4131059 MS.gene54722:CDS 35.0%
TCTAAACTCTAGCTGAGTTA+AGG - chr6.1:4131292-4131311 None:intergenic 35.0%
TGATACCATCATAAAAGCCA+CGG + chr6.1:4131112-4131131 MS.gene54722:CDS 35.0%
TGGATAAAATTACAGGTGAG+TGG + chr6.1:4130973-4130992 MS.gene54722:CDS 35.0%
TGGATCAAAAACTGTTGTTG+AGG + chr6.1:4130806-4130825 MS.gene54722:CDS 35.0%
TTGGAGAATTGTACTTTAGG+TGG + chr6.1:4131856-4131875 MS.gene54722:CDS 35.0%
! GCGTTTGTTTGGGATAATTT+CGG + chr6.1:4130872-4130891 MS.gene54722:CDS 35.0%
! GTTTTGTCGAAACAAGCTTA+GGG - chr6.1:4130500-4130519 None:intergenic 35.0%
! TGTTTTGTCGAAACAAGCTT+AGG - chr6.1:4130501-4130520 None:intergenic 35.0%
! TTGTTTGGGATAATTTCGGT+GGG + chr6.1:4130876-4130895 MS.gene54722:CDS 35.0%
! TTTGTTTGGGATAATTTCGG+TGG + chr6.1:4130875-4130894 MS.gene54722:CDS 35.0%
!!! TTTGCTTTTTCCAATACGAG+AGG - chr6.1:4131697-4131716 None:intergenic 35.0%
AACCCTAAGATTGTATCCAC+CGG + chr6.1:4131807-4131826 MS.gene54722:CDS 40.0%
AATTACAGGTGAGTGGTTGA+AGG + chr6.1:4130980-4130999 MS.gene54722:CDS 40.0%
AATTCATGAGATCCTGAGAG+AGG - chr6.1:4131835-4131854 None:intergenic 40.0%
AATTCGCAAGATTGCAACCT+TGG + chr6.1:4130578-4130597 MS.gene54722:CDS 40.0%
ACCGAACATAGCTCCATTAT+AGG - chr6.1:4130529-4130548 None:intergenic 40.0%
ACTGTTGTTGAGGAAGAAGA+AGG + chr6.1:4130816-4130835 MS.gene54722:CDS 40.0%
AGGTTGCAATCTTGCGAATT+TGG - chr6.1:4130578-4130597 None:intergenic 40.0%
CAAACATAGTGCCCATGTAA+GGG - chr6.1:4131662-4131681 None:intergenic 40.0%
CATCATAAAAGCCACGGTAT+TGG + chr6.1:4131118-4131137 MS.gene54722:CDS 40.0%
CGAGTCAGATATAAGCAAGT+TGG + chr6.1:4131759-4131778 MS.gene54722:CDS 40.0%
CTCAGGATCTCATGAATTCT+TGG + chr6.1:4131837-4131856 MS.gene54722:CDS 40.0%
GCATATACATACCAATACCG+TGG - chr6.1:4131132-4131151 None:intergenic 40.0%
GCTTGTTTCGACAAAACACT+TGG + chr6.1:4130503-4130522 MS.gene54722:CDS 40.0%
TCGATGTTTGGTCTAGCAAA+AGG + chr6.1:4130679-4130698 MS.gene54722:CDS 40.0%
! CAATACCGTGGCTTTTATGA+TGG - chr6.1:4131120-4131139 None:intergenic 40.0%
! GCCTATAATGGAGCTATGTT+CGG + chr6.1:4130525-4130544 MS.gene54722:CDS 40.0%
! TCGATTCGTTAAGATCTCCA+AGG - chr6.1:4130598-4130617 None:intergenic 40.0%
! TCGCAGACAATATTTGTTGG+AGG + chr6.1:4131616-4131635 MS.gene54722:intron 40.0%
!! TGATTTTGGTGGTCATGCTA+AGG + chr6.1:4130926-4130945 MS.gene54722:CDS 40.0%
!! TGTTGACGGATTTGAAGCAA+TGG + chr6.1:4130727-4130746 MS.gene54722:CDS 40.0%
GCAAACATAGTGCCCATGTA+AGG - chr6.1:4131663-4131682 None:intergenic 45.0%
TGCCGGTGGATACAATCTTA+GGG - chr6.1:4131812-4131831 None:intergenic 45.0%
TTGCGAATTTGGCGCCAATA+TGG - chr6.1:4130567-4130586 None:intergenic 45.0%
! ATGTTCGGTTTTGCACCCTA+CGG + chr6.1:4130540-4130559 MS.gene54722:CDS 45.0%
! CGCGAACATGTTGTTGTTGT+TGG - chr6.1:4130626-4130645 None:intergenic 45.0%
!! TGAAGGAGCATCGCCATAAA+AGG + chr6.1:4130997-4131016 MS.gene54722:CDS 45.0%
TTGCACCCTACGGTCCATAT+TGG + chr6.1:4130550-4130569 MS.gene54722:CDS 50.0%
! GTGCCGGTGGATACAATCTT+AGG - chr6.1:4131813-4131832 None:intergenic 50.0%
TGGCGCCAATATGGACCGTA+GGG - chr6.1:4130558-4130577 None:intergenic 55.0%
TTGGCGCCAATATGGACCGT+AGG - chr6.1:4130559-4130578 None:intergenic 55.0%
! TGAGATCCTGAGAGAGGTGC+CGG - chr6.1:4131829-4131848 None:intergenic 55.0%
TATCCACCGGCACCTCTCTC+AGG + chr6.1:4131820-4131839 MS.gene54722:CDS 60.0%
!! GATCCTGAGAGAGGTGCCGG+TGG - chr6.1:4131826-4131845 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 4130450 4131903 4130450 ID=MS.gene54722
chr6.1 mRNA 4130450 4131903 4130450 ID=MS.gene54722.t1;Parent=MS.gene54722
chr6.1 exon 4130450 4131139 4130450 ID=MS.gene54722.t1.exon1;Parent=MS.gene54722.t1
chr6.1 CDS 4130450 4131139 4130450 ID=cds.MS.gene54722.t1;Parent=MS.gene54722.t1
chr6.1 exon 4131622 4131903 4131622 ID=MS.gene54722.t1.exon2;Parent=MS.gene54722.t1
chr6.1 CDS 4131622 4131903 4131622 ID=cds.MS.gene54722.t1;Parent=MS.gene54722.t1
Gene Sequence

>MS.gene54722

ATGGCTAAGGAATGTTTCACTACAAACGACAAGGTTGTTTCTTCTCGCCCTAAGCTTGTTTCGACAAAACACTTGGCCTATAATGGAGCTATGTTCGGTTTTGCACCCTACGGTCCATATTGGCGCCAAATTCGCAAGATTGCAACCTTGGAGATCTTAACGAATCGACGAATCCAACAACAACAACATGTTCGCGTTTCTGAAGTTCAAACATCGATTAAAGAGCTATTCGATGTTTGGTCTAGCAAAAGGAACAAGTCATGTTCGTTAAATTATGTGTTGACGGATTTGAAGCAATGGTTTACACATTTAGCTTTCAACATGATTCTTCGAATGGTTGTTGGAAAGAGATATTTTGGATCAAAAACTGTTGTTGAGGAAGAAGAAGGTCAAAGATTTGTGAAAGCTTTGAATGAGATGATGCGTTTGTTTGGGATAATTTCGGTGGGAGATGTCATTCCTTGTTTGAATTCGTTTGATTTTGGTGGTCATGCTAAGGTCATGAAAGAAACTTCTAAAGAATTGGATAAAATTACAGGTGAGTGGTTGAAGGAGCATCGCCATAAAAGGACTTATAAAAATATTGATGGTCAAGATGATCAAGACATCATGGGTTTGTTACTTTCATTGCTTGATGGAACAACTATTGAAGGGTTTGATTGTGATACCATCATAAAAGCCACGGTATTGGTATGTATATGCTATTGAACATTTTCTTGTCTCACTATATTTGCTAAAAACATTATATAAATTAGATAATATATAGCTAAAACTTATAGTATAAAGTATTCCATATATTTTGAGAAAATCACTCTTCTCCCTTTAAAAATTGTTCATTCCCTTAACTCAGCTAGAGTTTAGAAAATGAACAATTTTGAAAGGAAGATGAACAATTTTCAAATTTTGAAGGGTGTTTCTAACATAGACCTAAAGAAGAGTCTTAAGATGGACCTCATCATTTTCAATAAAATAGTTGATATTGTTATTAAGAAATAGAGGAAAATATGTGATATGTTACTCAAAATAGTGAGGGTCTAACTATAGTTTTCACTATTTTTTGAGTTTCATATTAGAAGTACTCATATTTTTAATTGTTTAGCGAAATTACTCATTAAAAGGTGGATCATTTAAGTTATAAACAACTTATTAAGGAATTGACACTTTATTCGCAGACAATATTTGTTGGAGGAAGTGACATAATTAGTGTTACCCTTACATGGGCACTATGTTTGCTATTGAATAATCCTCTCGTATTGGAAAAAGCAAAAGAAGAACTTGATAATGAAGTTGGCAAAGAAAGATTTGTAAACGAGTCAGATATAAGCAAGTTGGTATATCTTCAAGCTATAGTAAAAGAAACCCTAAGATTGTATCCACCGGCACCTCTCTCAGGATCTCATGAATTCTTGGAGAATTGTACTTTAGGTGGTTACCATGTTAAAAAGGGAACTTGA
Protein sequence

>MS.gene54722.t1

MAKECFTTNDKVVSSRPKLVSTKHLAYNGAMFGFAPYGPYWRQIRKIATLEILTNRRIQQQQHVRVSEVQTSIKELFDVWSSKRNKSCSLNYVLTDLKQWFTHLAFNMILRMVVGKRYFGSKTVVEEEEGQRFVKALNEMMRLFGIISVGDVIPCLNSFDFGGHAKVMKETSKELDKITGEWLKEHRHKRTYKNIDGQDDQDIMGLLLSLLDGTTIEGFDCDTIIKATVLTIFVGGSDIISVTLTWALCLLLNNPLVLEKAKEELDNEVGKERFVNESDISKLVYLQAIVKETLRLYPPAPLSGSHEFLENCTLGGYHVKKGT