Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55096.t1 | XP_024632729.1 | 94.2 | 532 | 30 | 1 | 1 | 532 | 1 | 531 | 1.10E-283 | 985.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55096.t1 | P09189 | 68.1 | 536 | 167 | 3 | 1 | 535 | 1 | 533 | 1.5e-204 | 713.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55096.t1 | A0A396J8Z6 | 92.1 | 543 | 31 | 2 | 1 | 532 | 1 | 542 | 2.4e-280 | 973.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052609 | MS.gene55096 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene55096 | 0.811548 | 6.63E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55096.t1 | MTR_2g038270 | 89.630 | 540 | 47 | 2 | 1 | 532 | 1 | 539 | 0.0 | 980 |
| MS.gene55096.t1 | MTR_4g079590 | 81.273 | 534 | 98 | 2 | 1 | 534 | 1 | 532 | 0.0 | 889 |
| MS.gene55096.t1 | MTR_7g025770 | 81.356 | 531 | 97 | 2 | 1 | 531 | 1 | 529 | 0.0 | 881 |
| MS.gene55096.t1 | MTR_2g038260 | 75.376 | 532 | 130 | 1 | 1 | 532 | 1 | 531 | 0.0 | 849 |
| MS.gene55096.t1 | MTR_7g026170 | 74.436 | 532 | 134 | 1 | 1 | 532 | 1 | 530 | 0.0 | 823 |
| MS.gene55096.t1 | MTR_2g032550 | 72.744 | 532 | 143 | 2 | 1 | 531 | 1 | 531 | 0.0 | 806 |
| MS.gene55096.t1 | MTR_5g066800 | 72.294 | 545 | 138 | 3 | 1 | 534 | 1 | 543 | 0.0 | 804 |
| MS.gene55096.t1 | MTR_7g021440 | 73.258 | 531 | 140 | 2 | 1 | 531 | 1 | 529 | 0.0 | 801 |
| MS.gene55096.t1 | MTR_7g451380 | 72.505 | 531 | 145 | 1 | 1 | 531 | 1 | 530 | 0.0 | 799 |
| MS.gene55096.t1 | MTR_7g029415 | 74.383 | 527 | 132 | 3 | 6 | 532 | 13 | 536 | 0.0 | 798 |
| MS.gene55096.t1 | MTR_7g026110 | 71.910 | 534 | 146 | 4 | 1 | 534 | 1 | 530 | 0.0 | 790 |
| MS.gene55096.t1 | MTR_7g026130 | 73.372 | 522 | 134 | 3 | 1 | 520 | 1 | 519 | 0.0 | 788 |
| MS.gene55096.t1 | MTR_4g027145 | 70.588 | 544 | 146 | 3 | 1 | 532 | 1 | 542 | 0.0 | 783 |
| MS.gene55096.t1 | MTR_2g022050 | 72.659 | 534 | 145 | 1 | 1 | 534 | 1 | 533 | 0.0 | 782 |
| MS.gene55096.t1 | MTR_7g011590 | 71.536 | 534 | 137 | 4 | 1 | 534 | 1 | 519 | 0.0 | 776 |
| MS.gene55096.t1 | MTR_2g437440 | 72.102 | 509 | 141 | 1 | 1 | 509 | 1 | 508 | 0.0 | 771 |
| MS.gene55096.t1 | MTR_8g103930 | 70.201 | 547 | 132 | 6 | 1 | 534 | 1 | 529 | 0.0 | 766 |
| MS.gene55096.t1 | MTR_7g026140 | 70.225 | 534 | 141 | 3 | 1 | 534 | 1 | 516 | 0.0 | 761 |
| MS.gene55096.t1 | MTR_7g025720 | 67.978 | 534 | 168 | 3 | 1 | 534 | 1 | 531 | 0.0 | 758 |
| MS.gene55096.t1 | MTR_8g032650 | 67.790 | 534 | 169 | 3 | 1 | 534 | 1 | 531 | 0.0 | 749 |
| MS.gene55096.t1 | MTR_7g025760 | 66.855 | 531 | 174 | 2 | 1 | 531 | 1 | 529 | 0.0 | 747 |
| MS.gene55096.t1 | MTR_7g024030 | 68.037 | 535 | 168 | 3 | 1 | 535 | 1 | 532 | 0.0 | 746 |
| MS.gene55096.t1 | MTR_7g026090 | 67.978 | 534 | 167 | 3 | 1 | 534 | 1 | 530 | 0.0 | 743 |
| MS.gene55096.t1 | MTR_7g024390 | 67.477 | 535 | 170 | 3 | 1 | 534 | 1 | 532 | 0.0 | 741 |
| MS.gene55096.t1 | MTR_4g063710 | 67.164 | 536 | 172 | 3 | 1 | 535 | 1 | 533 | 0.0 | 739 |
| MS.gene55096.t1 | MTR_7g024580 | 66.978 | 536 | 173 | 3 | 1 | 535 | 1 | 533 | 0.0 | 739 |
| MS.gene55096.t1 | MTR_7g025820 | 67.477 | 535 | 172 | 2 | 1 | 535 | 1 | 533 | 0.0 | 739 |
| MS.gene55096.t1 | MTR_7g025790 | 66.479 | 534 | 176 | 3 | 1 | 534 | 1 | 531 | 0.0 | 737 |
| MS.gene55096.t1 | MTR_7g099680 | 66.791 | 536 | 174 | 3 | 1 | 535 | 1 | 533 | 0.0 | 737 |
| MS.gene55096.t1 | MTR_7g074460 | 70.037 | 534 | 140 | 3 | 1 | 534 | 1 | 514 | 0.0 | 733 |
| MS.gene55096.t1 | MTR_4g063720 | 66.791 | 536 | 174 | 3 | 1 | 535 | 1 | 533 | 0.0 | 733 |
| MS.gene55096.t1 | MTR_7g026030 | 65.730 | 534 | 180 | 3 | 1 | 534 | 1 | 531 | 0.0 | 728 |
| MS.gene55096.t1 | MTR_2g032580 | 68.173 | 531 | 136 | 3 | 1 | 531 | 1 | 498 | 0.0 | 728 |
| MS.gene55096.t1 | MTR_1g017130 | 68.352 | 534 | 127 | 5 | 1 | 534 | 1 | 492 | 0.0 | 728 |
| MS.gene55096.t1 | MTR_4g130540 | 66.168 | 535 | 176 | 4 | 1 | 534 | 1 | 531 | 0.0 | 726 |
| MS.gene55096.t1 | MTR_7g078190 | 66.045 | 536 | 177 | 5 | 1 | 534 | 1 | 533 | 0.0 | 725 |
| MS.gene55096.t1 | MTR_7g025620 | 64.981 | 534 | 184 | 3 | 1 | 534 | 1 | 531 | 0.0 | 720 |
| MS.gene55096.t1 | MTR_7g025740 | 65.242 | 538 | 179 | 4 | 1 | 531 | 1 | 537 | 0.0 | 717 |
| MS.gene55096.t1 | MTR_7g025630 | 66.854 | 534 | 160 | 5 | 1 | 534 | 1 | 517 | 0.0 | 711 |
| MS.gene55096.t1 | MTR_7g078210 | 65.794 | 535 | 179 | 4 | 1 | 534 | 1 | 532 | 0.0 | 702 |
| MS.gene55096.t1 | MTR_7g007000 | 67.167 | 533 | 128 | 5 | 1 | 532 | 1 | 487 | 0.0 | 702 |
| MS.gene55096.t1 | MTR_7g451360 | 64.045 | 534 | 132 | 2 | 1 | 534 | 1 | 474 | 0.0 | 678 |
| MS.gene55096.t1 | MTR_7g035155 | 64.540 | 533 | 131 | 6 | 1 | 532 | 1 | 476 | 0.0 | 677 |
| MS.gene55096.t1 | MTR_1g041565 | 65.028 | 529 | 112 | 7 | 6 | 534 | 2 | 457 | 0.0 | 655 |
| MS.gene55096.t1 | MTR_7g025260 | 63.241 | 506 | 178 | 4 | 31 | 534 | 5 | 504 | 0.0 | 647 |
| MS.gene55096.t1 | MTR_2g032160 | 76.000 | 375 | 90 | 0 | 1 | 375 | 1 | 375 | 0.0 | 612 |
| MS.gene55096.t1 | MTR_6g033850 | 56.797 | 537 | 225 | 5 | 1 | 535 | 1 | 532 | 0.0 | 605 |
| MS.gene55096.t1 | MTR_6g033760 | 57.463 | 536 | 223 | 4 | 1 | 535 | 1 | 532 | 0.0 | 604 |
| MS.gene55096.t1 | MTR_2g017730 | 57.895 | 532 | 214 | 5 | 10 | 534 | 9 | 537 | 0.0 | 602 |
| MS.gene55096.t1 | MTR_6g033870 | 55.827 | 532 | 226 | 5 | 10 | 535 | 11 | 539 | 0.0 | 574 |
| MS.gene55096.t1 | MTR_8g099945 | 52.741 | 529 | 241 | 6 | 7 | 533 | 36 | 557 | 0.0 | 557 |
| MS.gene55096.t1 | MTR_6g033820 | 53.974 | 541 | 239 | 5 | 1 | 535 | 1 | 537 | 0.0 | 557 |
| MS.gene55096.t1 | MTR_6g033955 | 54.887 | 532 | 230 | 5 | 10 | 535 | 10 | 537 | 0.0 | 556 |
| MS.gene55096.t1 | MTR_8g099795 | 52.930 | 529 | 240 | 6 | 7 | 533 | 36 | 557 | 0.0 | 556 |
| MS.gene55096.t1 | MTR_2g040370 | 66.244 | 394 | 129 | 2 | 3 | 396 | 1023 | 1412 | 2.47e-171 | 529 |
| MS.gene55096.t1 | MTR_2g040370 | 65.116 | 387 | 130 | 3 | 4 | 389 | 1408 | 1790 | 1.73e-156 | 489 |
| MS.gene55096.t1 | MTR_2g040370 | 66.244 | 394 | 129 | 2 | 3 | 396 | 1023 | 1412 | 4.30e-171 | 528 |
| MS.gene55096.t1 | MTR_2g040370 | 65.206 | 388 | 130 | 3 | 4 | 390 | 1408 | 1791 | 5.19e-157 | 490 |
| MS.gene55096.t1 | MTR_2g040160 | 64.589 | 401 | 137 | 3 | 1 | 400 | 1101 | 1497 | 6.92e-170 | 520 |
| MS.gene55096.t1 | MTR_6g033800 | 55.556 | 441 | 193 | 3 | 95 | 535 | 4 | 441 | 2.78e-169 | 492 |
| MS.gene55096.t1 | MTR_2g040260 | 63.342 | 401 | 142 | 3 | 1 | 400 | 1030 | 1426 | 4.81e-168 | 514 |
| MS.gene55096.t1 | MTR_2g040350 | 62.779 | 403 | 141 | 4 | 3 | 400 | 814 | 1212 | 1.09e-164 | 500 |
| MS.gene55096.t1 | MTR_2g040220 | 64.175 | 388 | 135 | 3 | 1 | 386 | 1010 | 1395 | 5.39e-164 | 505 |
| MS.gene55096.t1 | MTR_2g040220 | 47.312 | 93 | 42 | 1 | 450 | 535 | 1399 | 1491 | 1.88e-16 | 83.6 |
| MS.gene55096.t1 | MTR_2g040350 | 63.476 | 397 | 136 | 4 | 9 | 400 | 1038 | 1430 | 6.96e-163 | 500 |
| MS.gene55096.t1 | MTR_7g026080 | 88.571 | 245 | 28 | 0 | 1 | 245 | 1 | 245 | 1.12e-160 | 457 |
| MS.gene55096.t1 | MTR_1g077230 | 76.950 | 282 | 65 | 0 | 1 | 282 | 1 | 282 | 6.45e-158 | 451 |
| MS.gene55096.t1 | MTR_2g031670 | 60.154 | 389 | 64 | 4 | 21 | 409 | 43 | 340 | 7.41e-153 | 441 |
| MS.gene55096.t1 | MTR_2g010020 | 47.290 | 535 | 259 | 11 | 2 | 531 | 49 | 565 | 5.42e-151 | 448 |
| MS.gene55096.t1 | MTR_4g063720 | 47.201 | 536 | 208 | 9 | 1 | 535 | 1 | 462 | 5.63e-151 | 445 |
| MS.gene55096.t1 | MTR_2g010020 | 47.290 | 535 | 259 | 11 | 2 | 531 | 50 | 566 | 8.98e-151 | 447 |
| MS.gene55096.t1 | MTR_4g092920 | 45.981 | 535 | 267 | 10 | 2 | 531 | 46 | 563 | 1.24e-145 | 434 |
| MS.gene55096.t1 | MTR_2g005690 | 45.283 | 530 | 269 | 10 | 9 | 533 | 71 | 584 | 8.44e-138 | 415 |
| MS.gene55096.t1 | MTR_7g026050 | 70.103 | 291 | 57 | 4 | 245 | 534 | 1 | 262 | 1.26e-131 | 387 |
| MS.gene55096.t1 | MTR_4g088515 | 72.112 | 251 | 52 | 1 | 8 | 258 | 275 | 507 | 4.05e-123 | 375 |
| MS.gene55096.t1 | MTR_4g088515 | 73.786 | 103 | 26 | 1 | 336 | 438 | 518 | 619 | 3.23e-40 | 154 |
| MS.gene55096.t1 | MTR_6g034005 | 46.930 | 456 | 228 | 7 | 82 | 535 | 2 | 445 | 1.16e-120 | 371 |
| MS.gene55096.t1 | MTR_4g092920 | 45.023 | 442 | 224 | 7 | 94 | 531 | 3 | 429 | 3.12e-117 | 357 |
| MS.gene55096.t1 | MTR_6g033810 | 51.282 | 312 | 103 | 2 | 100 | 410 | 22 | 285 | 4.72e-99 | 301 |
| MS.gene55096.t1 | MTR_5g097190 | 58.268 | 254 | 59 | 3 | 3 | 256 | 152 | 358 | 2.29e-92 | 287 |
| MS.gene55096.t1 | MTR_6g033855 | 42.895 | 373 | 127 | 4 | 91 | 463 | 13 | 299 | 6.80e-91 | 281 |
| MS.gene55096.t1 | MTR_6g478100 | 66.509 | 212 | 57 | 2 | 38 | 249 | 10 | 207 | 3.84e-90 | 280 |
| MS.gene55096.t1 | MTR_1g077240 | 65.728 | 213 | 71 | 2 | 322 | 534 | 1 | 211 | 4.98e-79 | 249 |
| MS.gene55096.t1 | MTR_4g012050 | 32.230 | 453 | 287 | 7 | 9 | 445 | 3 | 451 | 2.29e-72 | 247 |
| MS.gene55096.t1 | MTR_2g102180 | 31.519 | 441 | 286 | 6 | 9 | 437 | 3 | 439 | 9.14e-71 | 243 |
| MS.gene55096.t1 | MTR_1207s0010 | 61.143 | 175 | 67 | 1 | 109 | 283 | 2 | 175 | 5.25e-69 | 219 |
| MS.gene55096.t1 | MTR_5g006180 | 30.333 | 511 | 319 | 12 | 10 | 506 | 30 | 517 | 6.86e-68 | 229 |
| MS.gene55096.t1 | MTR_3g051300 | 31.442 | 423 | 281 | 6 | 9 | 429 | 3 | 418 | 2.70e-67 | 232 |
| MS.gene55096.t1 | MTR_5g092570 | 31.860 | 430 | 284 | 5 | 9 | 433 | 3 | 428 | 7.33e-65 | 225 |
| MS.gene55096.t1 | MTR_7g026180 | 83.193 | 119 | 20 | 0 | 78 | 196 | 23 | 141 | 2.11e-63 | 211 |
| MS.gene55096.t1 | MTR_3g081170 | 27.586 | 522 | 337 | 11 | 9 | 496 | 26 | 540 | 9.02e-59 | 210 |
| MS.gene55096.t1 | MTR_4g115780 | 32.505 | 523 | 313 | 16 | 10 | 505 | 141 | 650 | 1.81e-58 | 206 |
| MS.gene55096.t1 | MTR_5g090110 | 29.352 | 494 | 305 | 13 | 10 | 490 | 29 | 491 | 1.54e-57 | 200 |
| MS.gene55096.t1 | MTR_4g107920 | 30.039 | 516 | 304 | 18 | 10 | 498 | 21 | 506 | 1.24e-54 | 193 |
| MS.gene55096.t1 | MTR_6g033910 | 43.891 | 221 | 73 | 3 | 67 | 285 | 12 | 183 | 1.31e-48 | 167 |
| MS.gene55096.t1 | MTR_5g005870 | 40.000 | 270 | 141 | 8 | 280 | 535 | 40 | 302 | 1.01e-46 | 168 |
| MS.gene55096.t1 | MTR_2g040355 | 34.593 | 344 | 92 | 9 | 189 | 532 | 2 | 212 | 2.59e-42 | 154 |
| MS.gene55096.t1 | MTR_7g074540 | 65.254 | 118 | 40 | 1 | 418 | 535 | 1 | 117 | 4.12e-42 | 150 |
| MS.gene55096.t1 | MTR_1g116250 | 46.739 | 184 | 56 | 3 | 348 | 531 | 60 | 201 | 1.59e-37 | 140 |
| MS.gene55096.t1 | MTR_5g005890 | 36.123 | 227 | 94 | 4 | 74 | 299 | 5 | 181 | 1.71e-35 | 131 |
| MS.gene55096.t1 | MTR_4g027235 | 68.000 | 75 | 24 | 0 | 1 | 75 | 1 | 75 | 9.58e-32 | 117 |
| MS.gene55096.t1 | MTR_4g027085 | 68.000 | 75 | 24 | 0 | 1 | 75 | 1 | 75 | 9.58e-32 | 117 |
| MS.gene55096.t1 | MTR_1g068900 | 61.468 | 109 | 34 | 4 | 428 | 532 | 23 | 127 | 8.77e-31 | 118 |
| MS.gene55096.t1 | MTR_7g026190 | 54.455 | 101 | 37 | 2 | 281 | 381 | 2 | 93 | 1.23e-28 | 113 |
| MS.gene55096.t1 | MTR_7g451390 | 60.638 | 94 | 36 | 1 | 437 | 530 | 9 | 101 | 1.22e-27 | 110 |
| MS.gene55096.t1 | MTR_2g017710 | 33.591 | 259 | 81 | 8 | 225 | 478 | 17 | 189 | 1.40e-24 | 103 |
| MS.gene55096.t1 | MTR_6g033805 | 61.644 | 73 | 26 | 1 | 1 | 73 | 1 | 71 | 7.32e-23 | 92.8 |
| MS.gene55096.t1 | MTR_7g026095 | 53.933 | 89 | 25 | 2 | 87 | 175 | 188 | 260 | 6.51e-21 | 94.7 |
| MS.gene55096.t1 | MTR_7g026095 | 38.462 | 104 | 52 | 3 | 442 | 534 | 204 | 306 | 8.75e-11 | 63.9 |
| MS.gene55096.t1 | MTR_7g021430 | 49.296 | 71 | 36 | 0 | 215 | 285 | 1 | 71 | 1.65e-16 | 78.6 |
| MS.gene55096.t1 | MTR_4g115860 | 38.710 | 93 | 56 | 1 | 397 | 489 | 29 | 120 | 4.59e-13 | 66.6 |
| MS.gene55096.t1 | MTR_3g114370 | 64.583 | 48 | 17 | 0 | 472 | 519 | 1 | 48 | 1.84e-12 | 64.3 |
| MS.gene55096.t1 | MTR_7g026160 | 36.975 | 119 | 49 | 4 | 298 | 390 | 72 | 190 | 2.15e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55096.t1 | AT3G12580 | 67.477 | 535 | 170 | 3 | 1 | 534 | 1 | 532 | 0.0 | 741 |
| MS.gene55096.t1 | AT5G02500 | 67.164 | 536 | 172 | 3 | 1 | 535 | 1 | 533 | 0.0 | 739 |
| MS.gene55096.t1 | AT5G02490 | 66.231 | 536 | 177 | 3 | 1 | 535 | 1 | 533 | 0.0 | 727 |
| MS.gene55096.t1 | AT1G56410 | 66.231 | 536 | 177 | 3 | 1 | 535 | 1 | 533 | 0.0 | 723 |
| MS.gene55096.t1 | AT3G09440 | 65.485 | 536 | 181 | 3 | 1 | 535 | 1 | 533 | 0.0 | 718 |
| MS.gene55096.t1 | AT3G09440 | 65.485 | 536 | 181 | 3 | 1 | 535 | 1 | 533 | 0.0 | 718 |
| MS.gene55096.t1 | AT3G09440 | 65.485 | 536 | 181 | 3 | 1 | 535 | 1 | 533 | 0.0 | 718 |
| MS.gene55096.t1 | AT3G09440 | 65.485 | 536 | 181 | 3 | 1 | 535 | 1 | 533 | 0.0 | 718 |
| MS.gene55096.t1 | AT1G16030 | 65.607 | 535 | 179 | 4 | 1 | 534 | 1 | 531 | 0.0 | 714 |
| MS.gene55096.t1 | AT5G02500 | 72.237 | 389 | 106 | 1 | 1 | 389 | 1 | 387 | 0.0 | 592 |
| MS.gene55096.t1 | AT5G28540 | 54.064 | 529 | 234 | 6 | 7 | 533 | 35 | 556 | 0.0 | 570 |
| MS.gene55096.t1 | AT5G42020 | 53.875 | 529 | 235 | 6 | 7 | 533 | 35 | 556 | 0.0 | 568 |
| MS.gene55096.t1 | AT5G42020 | 53.875 | 529 | 235 | 6 | 7 | 533 | 40 | 561 | 0.0 | 568 |
| MS.gene55096.t1 | AT1G09080 | 56.031 | 514 | 218 | 5 | 7 | 519 | 50 | 556 | 0.0 | 568 |
| MS.gene55096.t1 | AT1G09080 | 56.031 | 514 | 218 | 5 | 7 | 519 | 40 | 546 | 0.0 | 568 |
| MS.gene55096.t1 | AT5G42020 | 54.979 | 482 | 208 | 6 | 7 | 486 | 35 | 509 | 0.0 | 524 |
| MS.gene55096.t1 | AT5G09590 | 46.780 | 528 | 259 | 11 | 9 | 531 | 59 | 569 | 6.22e-143 | 427 |
| MS.gene55096.t1 | AT4G37910 | 46.212 | 528 | 262 | 10 | 9 | 531 | 54 | 564 | 3.20e-140 | 421 |
| MS.gene55096.t1 | AT4G37910 | 46.212 | 528 | 262 | 10 | 9 | 531 | 54 | 564 | 3.20e-140 | 421 |
| MS.gene55096.t1 | AT4G24280 | 45.198 | 531 | 270 | 10 | 8 | 533 | 79 | 593 | 2.64e-139 | 419 |
| MS.gene55096.t1 | AT5G49910 | 45.009 | 531 | 271 | 10 | 8 | 533 | 79 | 593 | 8.36e-138 | 416 |
| MS.gene55096.t1 | AT2G32120 | 33.010 | 515 | 309 | 13 | 10 | 509 | 31 | 524 | 1.67e-76 | 252 |
| MS.gene55096.t1 | AT2G32120 | 33.010 | 515 | 309 | 13 | 10 | 509 | 31 | 524 | 1.67e-76 | 252 |
| MS.gene55096.t1 | AT1G79930 | 32.009 | 453 | 288 | 6 | 9 | 445 | 3 | 451 | 9.74e-74 | 249 |
| MS.gene55096.t1 | AT1G79930 | 32.009 | 453 | 288 | 6 | 9 | 445 | 3 | 451 | 2.17e-73 | 249 |
| MS.gene55096.t1 | AT1G79920 | 32.230 | 453 | 287 | 6 | 9 | 445 | 3 | 451 | 2.27e-73 | 248 |
| MS.gene55096.t1 | AT1G79920 | 32.230 | 453 | 287 | 6 | 9 | 445 | 3 | 451 | 2.27e-73 | 248 |
| MS.gene55096.t1 | AT1G79920 | 32.230 | 453 | 287 | 6 | 9 | 445 | 3 | 451 | 2.27e-73 | 248 |
| MS.gene55096.t1 | AT1G79920 | 32.230 | 453 | 287 | 6 | 9 | 445 | 3 | 451 | 2.87e-73 | 247 |
| MS.gene55096.t1 | AT1G11660 | 33.498 | 406 | 262 | 5 | 9 | 411 | 3 | 403 | 3.17e-69 | 237 |
| MS.gene55096.t1 | AT1G11660 | 33.498 | 406 | 262 | 5 | 9 | 411 | 3 | 403 | 3.17e-69 | 237 |
| MS.gene55096.t1 | AT1G11660 | 33.498 | 406 | 262 | 5 | 9 | 411 | 3 | 403 | 3.17e-69 | 237 |
| MS.gene55096.t1 | AT1G11660 | 33.875 | 369 | 238 | 4 | 46 | 411 | 1 | 366 | 1.16e-62 | 218 |
| MS.gene55096.t1 | AT4G16660 | 28.083 | 527 | 333 | 15 | 6 | 496 | 23 | 539 | 1.18e-61 | 218 |
| MS.gene55096.t1 | AT4G16660 | 28.083 | 527 | 333 | 15 | 6 | 496 | 47 | 563 | 1.93e-61 | 217 |
Find 120 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAATAGTTCCTGCACTTT+TGG | 0.163788 | 2.2:+49278101 | None:intergenic |
| GGAGATTGCAGAGGCTTATT+TGG | 0.170727 | 2.2:-49278753 | MS.gene55096:CDS |
| ATGGATGCTGGTGCCATTGC+TGG | 0.234093 | 2.2:-49278662 | MS.gene55096:CDS |
| TCAGATACTAAGAGGTTAAT+TGG | 0.246077 | 2.2:-49278938 | MS.gene55096:intron |
| GTGTCTCTCCTCACAATTAA+AGG | 0.259274 | 2.2:-49278512 | MS.gene55096:CDS |
| CCTGACGAGGCTGTTGCTTA+TGG | 0.270322 | 2.2:-49278038 | MS.gene55096:CDS |
| TTTGAAGTTAAAGCCACTTC+TGG | 0.288192 | 2.2:-49278482 | MS.gene55096:CDS |
| AAGGACACTCTCTTTCAAAT+TGG | 0.288998 | 2.2:-49278318 | MS.gene55096:CDS |
| ACTTTGTGCAAGAATTTAAT+AGG | 0.318140 | 2.2:-49278412 | MS.gene55096:CDS |
| AACTCACAAAACACCGTCTT+TGG | 0.327171 | 2.2:-49279880 | MS.gene55096:intron |
| TATCTTTAGAAGTAAGATAT+TGG | 0.330640 | 2.2:+49277853 | None:intergenic |
| TCTTCATACACTCATTAAAA+AGG | 0.345773 | 2.2:+49278207 | None:intergenic |
| GGATAACCTTTCTTTGTCAT+TGG | 0.352083 | 2.2:+49277620 | None:intergenic |
| CCCATTGTCATTTGGTATCT+CGG | 0.365151 | 2.2:-49277943 | MS.gene55096:CDS |
| CTGACGAGGCTGTTGCTTAT+GGG | 0.367721 | 2.2:-49278037 | MS.gene55096:CDS |
| TGGCCGTTCAAGGTTATTGC+TGG | 0.368855 | 2.2:-49278872 | MS.gene55096:CDS |
| CTATTGCGTAATTTCTTCAA+TGG | 0.385526 | 2.2:-49278086 | MS.gene55096:CDS |
| CTACAATCAAGGCACTATAT+TGG | 0.386508 | 2.2:+49277829 | None:intergenic |
| CTCAACCTCCTCAAGGCTCT+TGG | 0.389032 | 2.2:+49278362 | None:intergenic |
| ACGTCTCGCAGCACCAAGTT+TGG | 0.390269 | 2.2:+49277969 | None:intergenic |
| GACGTTACCCCATTGTCATT+TGG | 0.398190 | 2.2:-49277951 | MS.gene55096:CDS |
| CATTAAGAATGTTCCAAACT+TGG | 0.400175 | 2.2:-49277982 | MS.gene55096:CDS |
| CCATAAGCAACAGCCTCGTC+AGG | 0.402169 | 2.2:+49278038 | None:intergenic |
| TGAGATTGATTATTTATATG+AGG | 0.407076 | 2.2:-49278285 | MS.gene55096:CDS |
| CATACTCATGTGTTGCTGTT+TGG | 0.417652 | 2.2:-49280029 | MS.gene55096:CDS |
| TCCTCGTCGTGGCCATCCCT+TGG | 0.423207 | 2.2:-49277730 | MS.gene55096:CDS |
| TGATTATCTTCACAACGTTA+AGG | 0.432196 | 2.2:+49278639 | None:intergenic |
| AATTCTTGCACAAAGTAGTT+CGG | 0.439321 | 2.2:+49278419 | None:intergenic |
| TATACTGTTGTGGCCGTTCA+AGG | 0.449502 | 2.2:-49278882 | MS.gene55096:CDS |
| TATTGCGTAATTTCTTCAAT+GGG | 0.454198 | 2.2:-49278085 | MS.gene55096:CDS |
| TAAATAATCAATCTCAATAG+TGG | 0.454560 | 2.2:+49278292 | None:intergenic |
| TTGTCTTTGATCTTGGTGGT+GGG | 0.456314 | 2.2:-49278544 | MS.gene55096:CDS |
| TTTGTCTTTGATCTTGGTGG+TGG | 0.458128 | 2.2:-49278545 | MS.gene55096:CDS |
| GTTGAGAACTTCTTGTGAAA+AGG | 0.462126 | 2.2:-49278345 | MS.gene55096:CDS |
| CCGAGATACCAAATGACAAT+GGG | 0.462353 | 2.2:+49277943 | None:intergenic |
| ACTGCTGCAGCTATTGCATA+TGG | 0.476452 | 2.2:-49278608 | MS.gene55096:CDS |
| CTTCTGGAAACACTCACCTC+GGG | 0.477285 | 2.2:-49278466 | MS.gene55096:CDS |
| AAGAAGATGAGAAATTCTTA+AGG | 0.480254 | 2.2:-49277564 | None:intergenic |
| TTTAGAAGTAAGATATTGGC+TGG | 0.480975 | 2.2:+49277857 | None:intergenic |
| TTCTTGTCGGTGGCTCGTCT+AGG | 0.487944 | 2.2:-49278127 | MS.gene55096:CDS |
| TTATGAGTGTGGTGATTCCT+AGG | 0.490594 | 2.2:-49277905 | MS.gene55096:CDS |
| CTTCTTGTGAAAAGGCGAAA+AGG | 0.494676 | 2.2:-49278337 | MS.gene55096:CDS |
| TCAGTAAAAGCAACAAAAGA+AGG | 0.494944 | 2.2:+49279949 | None:intergenic |
| CTCATGTGTTGCTGTTTGGT+TGG | 0.495660 | 2.2:-49280025 | MS.gene55096:CDS |
| GTACATGATATTGTTCTTGT+CGG | 0.498157 | 2.2:-49278140 | MS.gene55096:CDS |
| TGAGAATCGTTAAAATAAGC+AGG | 0.500441 | 2.2:+49278698 | None:intergenic |
| TAGTGTTAAGTACAAGGGTC+AGG | 0.501144 | 2.2:-49278828 | MS.gene55096:CDS |
| CGAAAAGCCACCATGGATGC+TGG | 0.502548 | 2.2:-49278674 | MS.gene55096:CDS |
| TATTGGCTGGTCTTCTTGAA+AGG | 0.508102 | 2.2:+49277870 | None:intergenic |
| ACGAGGAACACTTGGAAGAC+CGG | 0.511827 | 2.2:+49277746 | None:intergenic |
| GAGATTATCCACAACAATGA+AGG | 0.515153 | 2.2:-49279985 | MS.gene55096:CDS |
| GCCTTGATTGTAGTTTGTGA+GGG | 0.515295 | 2.2:-49277819 | MS.gene55096:CDS |
| TGGCCACGACGAGGAACACT+TGG | 0.518133 | 2.2:+49277738 | None:intergenic |
| ATACTAAGAGGTTAATTGGT+AGG | 0.520603 | 2.2:-49278934 | MS.gene55096:CDS |
| GTGAGTGACAACAACGTGCT+TGG | 0.521927 | 2.2:-49277783 | MS.gene55096:CDS |
| TGCTTTGCTATCGATGAAAA+CGG | 0.522627 | 2.2:-49277702 | MS.gene55096:CDS |
| CGATAACCAATGACAAAGAA+AGG | 0.526916 | 2.2:-49277626 | MS.gene55096:CDS |
| ACTGATGCTCAAAGGTTGGT+TGG | 0.530668 | 2.2:-49279931 | MS.gene55096:CDS |
| GTCTAGGATTCCAAAAGTGC+AGG | 0.532443 | 2.2:-49278111 | MS.gene55096:CDS |
| CACATGAGTATGTTGTTCCT+AGG | 0.534194 | 2.2:+49280040 | None:intergenic |
| GAGGTGAGTGTTTCCAGAAG+TGG | 0.537456 | 2.2:+49278469 | None:intergenic |
| AAAGGTACAGAAGTGTTCCT+AGG | 0.538214 | 2.2:+49277888 | None:intergenic |
| AAACACGAAGGGCATGTTGT+GGG | 0.538509 | 2.2:-49280069 | MS.gene55096:CDS |
| ACCCTCACAAACTACAATCA+AGG | 0.539796 | 2.2:+49277818 | None:intergenic |
| AGCAATGGCACCAGCATCCA+TGG | 0.539868 | 2.2:+49278664 | None:intergenic |
| GCGTAATTTCTTCAATGGGA+AGG | 0.541000 | 2.2:-49278081 | MS.gene55096:CDS |
| GTTGGTTGGTGGTGCTGCTA+AGG | 0.541802 | 2.2:-49279917 | MS.gene55096:CDS |
| TGCCTTGATTGTAGTTTGTG+AGG | 0.542190 | 2.2:-49277820 | MS.gene55096:CDS |
| AATCTCATTCTTACTTCCAG+TGG | 0.544318 | 2.2:+49277650 | None:intergenic |
| CATCTTAACTGTTTCTGCAA+AGG | 0.547614 | 2.2:-49277679 | MS.gene55096:CDS |
| TTGTAGTTTGTGAGGGTGAG+AGG | 0.551491 | 2.2:-49277812 | MS.gene55096:CDS |
| TCTGCAAAGGAAAGATCCAC+TGG | 0.556269 | 2.2:-49277666 | MS.gene55096:CDS |
| TGACGAGGCTGTTGCTTATG+GGG | 0.558551 | 2.2:-49278036 | MS.gene55096:CDS |
| TACGATTAGTGTTAAGTACA+AGG | 0.559474 | 2.2:-49278834 | MS.gene55096:CDS |
| GATTGTTGAAAGTTGTCTTG+TGG | 0.568361 | 2.2:-49278186 | MS.gene55096:CDS |
| ATCGTTAAAATAAGCAGGAA+CGG | 0.570371 | 2.2:+49278703 | None:intergenic |
| CAATCTCCTTCATGTTTGTG+AGG | 0.570747 | 2.2:+49278768 | None:intergenic |
| TGTAGTTTGTGAGGGTGAGA+GGG | 0.579578 | 2.2:-49277811 | MS.gene55096:CDS |
| ACTTCTGGAAACACTCACCT+CGG | 0.583908 | 2.2:-49278467 | MS.gene55096:CDS |
| GATGCTCAAAGGTTGGTTGG+TGG | 0.585022 | 2.2:-49279928 | MS.gene55096:CDS |
| AGAGGCTTATTTGGAATCGC+CGG | 0.587154 | 2.2:-49278744 | MS.gene55096:CDS |
| CATGTTGTGGGCATAGACCT+AGG | 0.588329 | 2.2:-49280057 | MS.gene55096:CDS |
| GAATAGAAATATACCAAAGA+CGG | 0.590465 | 2.2:+49279867 | None:intergenic |
| TTGTACTTAACACTAATCGT+AGG | 0.591476 | 2.2:+49278836 | None:intergenic |
| ATATGCAATAGCTGCAGCAG+TGG | 0.594040 | 2.2:+49278610 | None:intergenic |
| AGAACAAAGTGGATATCACT+AGG | 0.600332 | 2.2:-49278388 | MS.gene55096:CDS |
| TATTGTCCTCACAAACATGA+AGG | 0.601761 | 2.2:-49278774 | MS.gene55096:CDS |
| TATGCAATAGCTGCAGCAGT+GGG | 0.602359 | 2.2:+49278611 | None:intergenic |
| GATAGCAAAGCATACATCCA+AGG | 0.607442 | 2.2:+49277713 | None:intergenic |
| CACAACGTTAAGGCCAGCAA+TGG | 0.608818 | 2.2:+49278649 | None:intergenic |
| CATGATATTGTTCTTGTCGG+TGG | 0.608819 | 2.2:-49278137 | MS.gene55096:CDS |
| ATTTAATAGGAAGAACAAAG+TGG | 0.609345 | 2.2:-49278399 | MS.gene55096:CDS |
| AGACATCACCTTTAATTGTG+AGG | 0.611395 | 2.2:+49278504 | None:intergenic |
| ACACCAGCAATAACCTTGAA+CGG | 0.614534 | 2.2:+49278869 | None:intergenic |
| ATAGCAAAGCATACATCCAA+GGG | 0.619096 | 2.2:+49277714 | None:intergenic |
| TTCTCAGCGAAAAGCCACCA+TGG | 0.620029 | 2.2:-49278681 | MS.gene55096:CDS |
| ACCGAGATACCAAATGACAA+TGG | 0.622533 | 2.2:+49277942 | None:intergenic |
| TTCTGGAAACACTCACCTCG+GGG | 0.622900 | 2.2:-49278465 | MS.gene55096:CDS |
| CAAGCTGCTGTGTTGAGTGA+AGG | 0.627003 | 2.2:-49278005 | MS.gene55096:CDS |
| CAAAGCATACATCCAAGGGA+TGG | 0.629656 | 2.2:+49277718 | None:intergenic |
| CAAGAGCATCAACCCTGACG+AGG | 0.630814 | 2.2:-49278051 | MS.gene55096:CDS |
| AAAACACGAAGGGCATGTTG+TGG | 0.634097 | 2.2:-49280070 | MS.gene55096:CDS |
| CAAGTTTGAAGAAATCAACA+TGG | 0.636916 | 2.2:-49278231 | MS.gene55096:CDS |
| GGAGAAGCTCCTTTGTGCAG+AGG | 0.636950 | 2.2:-49278807 | MS.gene55096:CDS |
| CTTCCAAGTGTTCCTCGTCG+TGG | 0.643859 | 2.2:-49277741 | MS.gene55096:CDS |
| ATGAGATTTCCTCTGCACAA+AGG | 0.646200 | 2.2:+49278798 | None:intergenic |
| AGAAGTTCTCAACCTCCTCA+AGG | 0.646239 | 2.2:+49278355 | None:intergenic |
| GACAAAAGAAGTAATTGTGA+TGG | 0.650690 | 2.2:-49278581 | MS.gene55096:CDS |
| CATAAGCAACAGCCTCGTCA+GGG | 0.652558 | 2.2:+49278039 | None:intergenic |
| CTAGGAATCCAAGAGCCTTG+AGG | 0.655232 | 2.2:-49278370 | MS.gene55096:CDS |
| GGAATCCAAGAGCCTTGAGG+AGG | 0.663076 | 2.2:-49278367 | MS.gene55096:CDS |
| ACGATTAGTGTTAAGTACAA+GGG | 0.676520 | 2.2:-49278833 | MS.gene55096:CDS |
| TAATGATCGTATTATGAGTG+TGG | 0.677159 | 2.2:-49277916 | MS.gene55096:CDS |
| TCCAAGGGATGGCCACGACG+AGG | 0.686495 | 2.2:+49277729 | None:intergenic |
| AAACATGAAGGAGATTGCAG+AGG | 0.695775 | 2.2:-49278762 | MS.gene55096:CDS |
| CGAGATACCAAATGACAATG+GGG | 0.715816 | 2.2:+49277944 | None:intergenic |
| ACATGGCGAGAAAACACGAA+GGG | 0.718700 | 2.2:-49280080 | MS.gene55096:CDS |
| TCTGGAAACACTCACCTCGG+GGG | 0.720115 | 2.2:-49278464 | MS.gene55096:CDS |
| AATGGCACCAGCATCCATGG+TGG | 0.736459 | 2.2:+49278667 | None:intergenic |
| TACATGGCGAGAAAACACGA+AGG | 0.738964 | 2.2:-49280081 | MS.gene55096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACAATAATTGTTAAAT+TGG | + | chr2.2:49277912-49277931 | None:intergenic | 10.0% |
| !! | ATAAATTAATATATATGTAG+CGG | - | chr2.2:49278484-49278503 | MS.gene55096:CDS | 10.0% |
| !! | AAGAGTAAATATTAAAAGAT+TGG | + | chr2.2:49277804-49277823 | None:intergenic | 15.0% |
| !!! | AGTAAGAAAAACAATTTTTT+TGG | + | chr2.2:49278122-49278141 | None:intergenic | 15.0% |
| !!! | GTAAGAAAAACAATTTTTTT+GGG | + | chr2.2:49278121-49278140 | None:intergenic | 15.0% |
| !! | AATAGTAGATGGATAAATAA+AGG | - | chr2.2:49278337-49278356 | MS.gene55096:CDS | 20.0% |
| !! | ATAGGTCATAACTTATATTA+TGG | - | chr2.2:49278579-49278598 | MS.gene55096:CDS | 20.0% |
| !! | TAAATAATCAATCTCAATAG+TGG | + | chr2.2:49279355-49279374 | None:intergenic | 20.0% |
| !! | TAGGTCATAACTTATATTAT+GGG | - | chr2.2:49278580-49278599 | MS.gene55096:CDS | 20.0% |
| !! | TGAGATTGATTATTTATATG+AGG | - | chr2.2:49279359-49279378 | MS.gene55096:intron | 20.0% |
| !!! | AATATTTTTGTCTTTGATCT+TGG | - | chr2.2:49279093-49279112 | MS.gene55096:intron | 20.0% |
| !!! | CAATTATTGTTATTTGAGTT+AGG | - | chr2.2:49277918-49277937 | MS.gene55096:CDS | 20.0% |
| !!! | TATCTTTAGAAGTAAGATAT+TGG | + | chr2.2:49279794-49279813 | None:intergenic | 20.0% |
| !!! | TCACAACATAACTTTATTTA+AGG | + | chr2.2:49277983-49278002 | None:intergenic | 20.0% |
| !!! | TGATTCTTTATTTTCAAATG+CGG | - | chr2.2:49277957-49277976 | MS.gene55096:CDS | 20.0% |
| !!! | TTAGTTTTTTCAATAGTAGA+TGG | - | chr2.2:49278326-49278345 | MS.gene55096:CDS | 20.0% |
| ! | AAGTTATGACCTATAAAACA+CGG | + | chr2.2:49278573-49278592 | None:intergenic | 25.0% |
| ! | ACTTTGTGCAAGAATTTAAT+AGG | - | chr2.2:49279232-49279251 | MS.gene55096:intron | 25.0% |
| ! | ATCTTTAACTCTTGAATCTA+CGG | + | chr2.2:49278249-49278268 | None:intergenic | 25.0% |
| ! | ATTTAATAGGAAGAACAAAG+TGG | - | chr2.2:49279245-49279264 | MS.gene55096:intron | 25.0% |
| ! | ATTTACTCTTATTGTAGCTT+AGG | - | chr2.2:49277814-49277833 | MS.gene55096:CDS | 25.0% |
| ! | GAATAGAAATATACCAAAGA+CGG | + | chr2.2:49277780-49277799 | None:intergenic | 25.0% |
| ! | TATGACTATGTTAAAAAGAC+AGG | - | chr2.2:49278648-49278667 | MS.gene55096:CDS | 25.0% |
| ! | TATTGCGTAATTTCTTCAAT+GGG | - | chr2.2:49279559-49279578 | MS.gene55096:intron | 25.0% |
| ! | TCTTCATACACTCATTAAAA+AGG | + | chr2.2:49279440-49279459 | None:intergenic | 25.0% |
| ! | TTCAAAAAGATATACTGTTG+TGG | - | chr2.2:49278752-49278771 | MS.gene55096:CDS | 25.0% |
| !!! | TTTTTTCTTCAGATACTAAG+AGG | - | chr2.2:49278698-49278717 | MS.gene55096:CDS | 25.0% |
| AATTCTTGCACAAAGTAGTT+CGG | + | chr2.2:49279228-49279247 | None:intergenic | 30.0% | |
| ACACTTGTATAACACATAAG+AGG | - | chr2.2:49278167-49278186 | MS.gene55096:CDS | 30.0% | |
| ACGATTAGTGTTAAGTACAA+GGG | - | chr2.2:49278811-49278830 | MS.gene55096:CDS | 30.0% | |
| ATAAAGTTATGTTGTGACAG+TGG | - | chr2.2:49277986-49278005 | MS.gene55096:CDS | 30.0% | |
| ATACTAAGAGGTTAATTGGT+AGG | - | chr2.2:49278710-49278729 | MS.gene55096:CDS | 30.0% | |
| ATCGTTAAAATAAGCAGGAA+CGG | + | chr2.2:49278944-49278963 | None:intergenic | 30.0% | |
| CAAGTTTGAAGAAATCAACA+TGG | - | chr2.2:49279413-49279432 | MS.gene55096:intron | 30.0% | |
| CATTAAGAATGTTCCAAACT+TGG | - | chr2.2:49279662-49279681 | MS.gene55096:intron | 30.0% | |
| CTATTGCGTAATTTCTTCAA+TGG | - | chr2.2:49279558-49279577 | MS.gene55096:intron | 30.0% | |
| GACAAAAGAAGTAATTGTGA+TGG | - | chr2.2:49279063-49279082 | MS.gene55096:intron | 30.0% | |
| GTACATGATATTGTTCTTGT+CGG | - | chr2.2:49279504-49279523 | MS.gene55096:intron | 30.0% | |
| TAATATATATGTAGCGGTGT+CGG | - | chr2.2:49278490-49278509 | MS.gene55096:CDS | 30.0% | |
| TAATGATCGTATTATGAGTG+TGG | - | chr2.2:49279728-49279747 | MS.gene55096:intron | 30.0% | |
| TACGATTAGTGTTAAGTACA+AGG | - | chr2.2:49278810-49278829 | MS.gene55096:CDS | 30.0% | |
| TCAGATACTAAGAGGTTAAT+TGG | - | chr2.2:49278706-49278725 | MS.gene55096:CDS | 30.0% | |
| TCAGTAAAAGCAACAAAAGA+AGG | + | chr2.2:49277698-49277717 | None:intergenic | 30.0% | |
| TGAGAATCGTTAAAATAAGC+AGG | + | chr2.2:49278949-49278968 | None:intergenic | 30.0% | |
| TGATTATCTTCACAACGTTA+AGG | + | chr2.2:49279008-49279027 | None:intergenic | 30.0% | |
| TTGTACTTAACACTAATCGT+AGG | + | chr2.2:49278811-49278830 | None:intergenic | 30.0% | |
| TTTAGAAGTAAGATATTGGC+TGG | + | chr2.2:49279790-49279809 | None:intergenic | 30.0% | |
| ! | ATTTTTGTCTTTGATCTTGG+TGG | - | chr2.2:49279096-49279115 | MS.gene55096:intron | 30.0% |
| ! | CACAATTACTTCTTTTGTCA+AGG | + | chr2.2:49279062-49279081 | None:intergenic | 30.0% |
| ! | TTTCTTACTTCGACACTTTT+TGG | - | chr2.2:49278133-49278152 | MS.gene55096:CDS | 30.0% |
| !! | CAATTTTTCAATTTCGACTC+TGG | + | chr2.2:49280048-49280067 | None:intergenic | 30.0% |
| AAGGACACTCTCTTTCAAAT+TGG | - | chr2.2:49279326-49279345 | MS.gene55096:intron | 35.0% | |
| AATCTCATTCTTACTTCCAG+TGG | + | chr2.2:49279997-49280016 | None:intergenic | 35.0% | |
| ACAGCTAATGTAACAACCAT+TGG | + | chr2.2:49278519-49278538 | None:intergenic | 35.0% | |
| AGAACAAAGTGGATATCACT+AGG | - | chr2.2:49279256-49279275 | MS.gene55096:intron | 35.0% | |
| AGACATCACCTTTAATTGTG+AGG | + | chr2.2:49279143-49279162 | None:intergenic | 35.0% | |
| ATAACACATAAGAGGCCAAT+TGG | - | chr2.2:49278175-49278194 | MS.gene55096:CDS | 35.0% | |
| ATAGCAAAGCATACATCCAA+GGG | + | chr2.2:49279933-49279952 | None:intergenic | 35.0% | |
| ATTTGTCTGAGTTGTCCAAT+TGG | + | chr2.2:49278193-49278212 | None:intergenic | 35.0% | |
| CGATAACCAATGACAAAGAA+AGG | - | chr2.2:49280018-49280037 | MS.gene55096:CDS | 35.0% | |
| GAGATTATCCACAACAATGA+AGG | - | chr2.2:49277659-49277678 | MS.gene55096:CDS | 35.0% | |
| GATTGTTGAAAGTTGTCTTG+TGG | - | chr2.2:49279458-49279477 | MS.gene55096:intron | 35.0% | |
| GGATAACCTTTCTTTGTCAT+TGG | + | chr2.2:49280027-49280046 | None:intergenic | 35.0% | |
| GTTGAGAACTTCTTGTGAAA+AGG | - | chr2.2:49279299-49279318 | MS.gene55096:intron | 35.0% | |
| TATTGTCCTCACAAACATGA+AGG | - | chr2.2:49278870-49278889 | MS.gene55096:CDS | 35.0% | |
| ! | CTACAATCAAGGCACTATAT+TGG | + | chr2.2:49279818-49279837 | None:intergenic | 35.0% |
| ! | GTGACAACTGCATTTTTAAC+CGG | + | chr2.2:49278922-49278941 | None:intergenic | 35.0% |
| ! | TGCTTTGCTATCGATGAAAA+CGG | - | chr2.2:49279942-49279961 | MS.gene55096:CDS | 35.0% |
| ! | TTTGAAGTTAAAGCCACTTC+TGG | - | chr2.2:49279162-49279181 | MS.gene55096:intron | 35.0% |
| ! | TTTTACTGATGCTCAAAGGT+TGG | - | chr2.2:49277709-49277728 | MS.gene55096:CDS | 35.0% |
| ! | TTTTGTTGCCTTCATTGTTG+TGG | + | chr2.2:49277670-49277689 | None:intergenic | 35.0% |
| !! | CATCTTAACTGTTTCTGCAA+AGG | - | chr2.2:49279965-49279984 | MS.gene55096:CDS | 35.0% |
| !! | TTGCTTTTACTGATGCTCAA+AGG | - | chr2.2:49277705-49277724 | MS.gene55096:CDS | 35.0% |
| !!! | CTTGGTTTTTTCAGTCTTTC+CGG | - | chr2.2:49279879-49279898 | MS.gene55096:intron | 35.0% |
| AAACATGAAGGAGATTGCAG+AGG | - | chr2.2:49278882-49278901 | MS.gene55096:CDS | 40.0% | |
| AACTCACAAAACACCGTCTT+TGG | - | chr2.2:49277764-49277783 | MS.gene55096:CDS | 40.0% | |
| ACACCAGCAATAACCTTGAA+CGG | + | chr2.2:49278778-49278797 | None:intergenic | 40.0% | |
| ACCCTCACAAACTACAATCA+AGG | + | chr2.2:49279829-49279848 | None:intergenic | 40.0% | |
| ACCGAGATACCAAATGACAA+TGG | + | chr2.2:49279705-49279724 | None:intergenic | 40.0% | |
| ATGAGATTTCCTCTGCACAA+AGG | + | chr2.2:49278849-49278868 | None:intergenic | 40.0% | |
| CAATCTCCTTCATGTTTGTG+AGG | + | chr2.2:49278879-49278898 | None:intergenic | 40.0% | |
| CACATGAGTATGTTGTTCCT+AGG | + | chr2.2:49277607-49277626 | None:intergenic | 40.0% | |
| CATGATATTGTTCTTGTCGG+TGG | - | chr2.2:49279507-49279526 | MS.gene55096:intron | 40.0% | |
| CCGAGATACCAAATGACAAT+GGG | + | chr2.2:49279704-49279723 | None:intergenic | 40.0% | |
| CGAGATACCAAATGACAATG+GGG | + | chr2.2:49279703-49279722 | None:intergenic | 40.0% | |
| CTTCATAGGTTACGACATTG+GGG | + | chr2.2:49278023-49278042 | None:intergenic | 40.0% | |
| CTTCTTGTGAAAAGGCGAAA+AGG | - | chr2.2:49279307-49279326 | MS.gene55096:intron | 40.0% | |
| GATAGCAAAGCATACATCCA+AGG | + | chr2.2:49279934-49279953 | None:intergenic | 40.0% | |
| GCGTAATTTCTTCAATGGGA+AGG | - | chr2.2:49279563-49279582 | MS.gene55096:intron | 40.0% | |
| GCTTCATAGGTTACGACATT+GGG | + | chr2.2:49278024-49278043 | None:intergenic | 40.0% | |
| GGACAACTCAGACAAATGTT+TGG | - | chr2.2:49278196-49278215 | MS.gene55096:CDS | 40.0% | |
| GTGTCTCTCCTCACAATTAA+AGG | - | chr2.2:49279132-49279151 | MS.gene55096:intron | 40.0% | |
| GTTATACAAGTGTCAGACAC+CGG | + | chr2.2:49278160-49278179 | None:intergenic | 40.0% | |
| TAGTGTTAAGTACAAGGGTC+AGG | - | chr2.2:49278816-49278835 | MS.gene55096:CDS | 40.0% | |
| TGCTTCATAGGTTACGACAT+TGG | + | chr2.2:49278025-49278044 | None:intergenic | 40.0% | |
| TTATGAGTGTGGTGATTCCT+AGG | - | chr2.2:49279739-49279758 | MS.gene55096:intron | 40.0% | |
| TTTGTCTTTGATCTTGGTGG+TGG | - | chr2.2:49279099-49279118 | MS.gene55096:intron | 40.0% | |
| ! | CATACTCATGTGTTGCTGTT+TGG | - | chr2.2:49277615-49277634 | MS.gene55096:CDS | 40.0% |
| ! | CCCATTGTCATTTGGTATCT+CGG | - | chr2.2:49279701-49279720 | MS.gene55096:intron | 40.0% |
| ! | GCCTTGATTGTAGTTTGTGA+GGG | - | chr2.2:49279825-49279844 | MS.gene55096:intron | 40.0% |
| ! | TGCCTTGATTGTAGTTTGTG+AGG | - | chr2.2:49279824-49279843 | MS.gene55096:intron | 40.0% |
| ! | TGCGAATATCATAGGAGTGT+TGG | + | chr2.2:49278068-49278087 | None:intergenic | 40.0% |
| ! | TTGTCTTTGATCTTGGTGGT+GGG | - | chr2.2:49279100-49279119 | MS.gene55096:intron | 40.0% |
| !! | AAAGGTACAGAAGTGTTCCT+AGG | + | chr2.2:49279759-49279778 | None:intergenic | 40.0% |
| !! | TACTTCGACACTTTTTGGAC+CGG | - | chr2.2:49278138-49278157 | MS.gene55096:CDS | 40.0% |
| !! | TATTGGCTGGTCTTCTTGAA+AGG | + | chr2.2:49279777-49279796 | None:intergenic | 40.0% |
| AAGGTCCCAGATTCAAACCT+GGG | - | chr2.2:49277877-49277896 | MS.gene55096:CDS | 45.0% | |
| ACCTGTCGTGCGAATATCAT+AGG | + | chr2.2:49278076-49278095 | None:intergenic | 45.0% | |
| ACTCTTGAATCTACGGTGTG+TGG | + | chr2.2:49278242-49278261 | None:intergenic | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | - | chr2.2:49279036-49279055 | MS.gene55096:intron | 45.0% | |
| AGAAGTTCTCAACCTCCTCA+AGG | + | chr2.2:49279292-49279311 | None:intergenic | 45.0% | |
| ATAAAACACGGACTCCGACA+CGG | + | chr2.2:49278561-49278580 | None:intergenic | 45.0% | |
| ATATGCAATAGCTGCAGCAG+TGG | + | chr2.2:49279037-49279056 | None:intergenic | 45.0% | |
| CAAAGCATACATCCAAGGGA+TGG | + | chr2.2:49279929-49279948 | None:intergenic | 45.0% | |
| CTTCACCCAGGTTTGAATCT+GGG | + | chr2.2:49277885-49277904 | None:intergenic | 45.0% | |
| GAAGCATAGACACGCGTATT+GGG | - | chr2.2:49278039-49278058 | MS.gene55096:CDS | 45.0% | |
| GACGTTACCCCATTGTCATT+TGG | - | chr2.2:49279693-49279712 | MS.gene55096:intron | 45.0% | |
| GGAGATTGCAGAGGCTTATT+TGG | - | chr2.2:49278891-49278910 | MS.gene55096:CDS | 45.0% | |
| TACGCGTGTCTATGCTTCAT+AGG | + | chr2.2:49278037-49278056 | None:intergenic | 45.0% | |
| TATACTGTTGTGGCCGTTCA+AGG | - | chr2.2:49278762-49278781 | MS.gene55096:CDS | 45.0% | |
| TATGCAATAGCTGCAGCAGT+GGG | + | chr2.2:49279036-49279055 | None:intergenic | 45.0% | |
| TCCTATGATATTCGCACGAC+AGG | - | chr2.2:49278072-49278091 | MS.gene55096:CDS | 45.0% | |
| TCTGCAAAGGAAAGATCCAC+TGG | - | chr2.2:49279978-49279997 | MS.gene55096:CDS | 45.0% | |
| TGAAGCATAGACACGCGTAT+TGG | - | chr2.2:49278038-49278057 | MS.gene55096:CDS | 45.0% | |
| TGTCAGTTAGTTGTCCGTGT+CGG | - | chr2.2:49278544-49278563 | MS.gene55096:CDS | 45.0% | |
| ! | AAAACACGAAGGGCATGTTG+TGG | - | chr2.2:49277574-49277593 | MS.gene55096:CDS | 45.0% |
| ! | AAACACGAAGGGCATGTTGT+GGG | - | chr2.2:49277575-49277594 | MS.gene55096:CDS | 45.0% |
| ! | ACTGATGCTCAAAGGTTGGT+TGG | - | chr2.2:49277713-49277732 | MS.gene55096:CDS | 45.0% |
| ! | ACTTCTGGAAACACTCACCT+CGG | - | chr2.2:49279177-49279196 | MS.gene55096:intron | 45.0% |
| ! | AGAGGCTTATTTGGAATCGC+CGG | - | chr2.2:49278900-49278919 | MS.gene55096:CDS | 45.0% |
| ! | CGCAATAGTTCCTGCACTTT+TGG | + | chr2.2:49279546-49279565 | None:intergenic | 45.0% |
| ! | GTCTAGGATTCCAAAAGTGC+AGG | - | chr2.2:49279533-49279552 | MS.gene55096:intron | 45.0% |
| ! | TGTAGTTTGTGAGGGTGAGA+GGG | - | chr2.2:49279833-49279852 | MS.gene55096:intron | 45.0% |
| ! | TGTCGGAGTCCGTGTTTTAT+AGG | - | chr2.2:49278561-49278580 | MS.gene55096:CDS | 45.0% |
| ! | TTGTAGTTTGTGAGGGTGAG+AGG | - | chr2.2:49279832-49279851 | MS.gene55096:intron | 45.0% |
| !! | CTCATGTGTTGCTGTTTGGT+TGG | - | chr2.2:49277619-49277638 | MS.gene55096:CDS | 45.0% |
| ACGAGGAACACTTGGAAGAC+CGG | + | chr2.2:49279901-49279920 | None:intergenic | 50.0% | |
| CAAGCTGCTGTGTTGAGTGA+AGG | - | chr2.2:49279639-49279658 | MS.gene55096:intron | 50.0% | |
| CAAGGTCCCAGATTCAAACC+TGG | - | chr2.2:49277876-49277895 | MS.gene55096:CDS | 50.0% | |
| CACAACGTTAAGGCCAGCAA+TGG | + | chr2.2:49278998-49279017 | None:intergenic | 50.0% | |
| CATAAGCAACAGCCTCGTCA+GGG | + | chr2.2:49279608-49279627 | None:intergenic | 50.0% | |
| CATGTTGTGGGCATAGACCT+AGG | - | chr2.2:49277587-49277606 | MS.gene55096:CDS | 50.0% | |
| CCAGATTCAAACCTGGGTGA+AGG | - | chr2.2:49277883-49277902 | MS.gene55096:CDS | 50.0% | |
| CCTTCACCCAGGTTTGAATC+TGG | + | chr2.2:49277886-49277905 | None:intergenic | 50.0% | |
| CTAGGAATCCAAGAGCCTTG+AGG | - | chr2.2:49279274-49279293 | MS.gene55096:intron | 50.0% | |
| GAGGTGAGTGTTTCCAGAAG+TGG | + | chr2.2:49279178-49279197 | None:intergenic | 50.0% | |
| GTGAGTGACAACAACGTGCT+TGG | - | chr2.2:49279861-49279880 | MS.gene55096:intron | 50.0% | |
| TAAATTGGACGCCTTCACCC+AGG | + | chr2.2:49277897-49277916 | None:intergenic | 50.0% | |
| TGGCCGTTCAAGGTTATTGC+TGG | - | chr2.2:49278772-49278791 | MS.gene55096:CDS | 50.0% | |
| TTCTCAGCGAAAAGCCACCA+TGG | - | chr2.2:49278963-49278982 | MS.gene55096:intron | 50.0% | |
| ! | CTGACGAGGCTGTTGCTTAT+GGG | - | chr2.2:49279607-49279626 | MS.gene55096:intron | 50.0% |
| ! | CTTCTGGAAACACTCACCTC+GGG | - | chr2.2:49279178-49279197 | MS.gene55096:intron | 50.0% |
| ! | GATGCTCAAAGGTTGGTTGG+TGG | - | chr2.2:49277716-49277735 | MS.gene55096:CDS | 50.0% |
| ! | TGACGAGGCTGTTGCTTATG+GGG | - | chr2.2:49279608-49279627 | MS.gene55096:intron | 50.0% |
| ! | TTCTGGAAACACTCACCTCG+GGG | - | chr2.2:49279179-49279198 | MS.gene55096:intron | 50.0% |
| AATGGCACCAGCATCCATGG+TGG | + | chr2.2:49278980-49278999 | None:intergenic | 55.0% | |
| ACGTCTCGCAGCACCAAGTT+TGG | + | chr2.2:49279678-49279697 | None:intergenic | 55.0% | |
| AGCAATGGCACCAGCATCCA+TGG | + | chr2.2:49278983-49279002 | None:intergenic | 55.0% | |
| CACTCACACTCGCAACTGCA+AGG | - | chr2.2:49277858-49277877 | MS.gene55096:CDS | 55.0% | |
| CCATAAGCAACAGCCTCGTC+AGG | + | chr2.2:49279609-49279628 | None:intergenic | 55.0% | |
| CGAAAAGCCACCATGGATGC+TGG | - | chr2.2:49278970-49278989 | MS.gene55096:intron | 55.0% | |
| CTCAACCTCCTCAAGGCTCT+TGG | + | chr2.2:49279285-49279304 | None:intergenic | 55.0% | |
| CTTCCAAGTGTTCCTCGTCG+TGG | - | chr2.2:49279903-49279922 | MS.gene55096:CDS | 55.0% | |
| GGAATCCAAGAGCCTTGAGG+AGG | - | chr2.2:49279277-49279296 | MS.gene55096:intron | 55.0% | |
| GGAGAAGCTCCTTTGTGCAG+AGG | - | chr2.2:49278837-49278856 | MS.gene55096:CDS | 55.0% | |
| TATCAAAGTCCTCTCCCCCG+AGG | + | chr2.2:49279197-49279216 | None:intergenic | 55.0% | |
| TCTGGAAACACTCACCTCGG+GGG | - | chr2.2:49279180-49279199 | MS.gene55096:intron | 55.0% | |
| TTCTTGTCGGTGGCTCGTCT+AGG | - | chr2.2:49279517-49279536 | MS.gene55096:intron | 55.0% | |
| ! | CCTGACGAGGCTGTTGCTTA+TGG | - | chr2.2:49279606-49279625 | MS.gene55096:intron | 55.0% |
| !! | ATGGATGCTGGTGCCATTGC+TGG | - | chr2.2:49278982-49279001 | MS.gene55096:intron | 55.0% |
| !! | CAAGAGCATCAACCCTGACG+AGG | - | chr2.2:49279593-49279612 | MS.gene55096:intron | 55.0% |
| !! | GTTGGTTGGTGGTGCTGCTA+AGG | - | chr2.2:49277727-49277746 | MS.gene55096:CDS | 55.0% |
| AAACACTCACCTCGGGGGAG+AGG | - | chr2.2:49279185-49279204 | MS.gene55096:intron | 60.0% | |
| TGGCCACGACGAGGAACACT+TGG | + | chr2.2:49279909-49279928 | None:intergenic | 60.0% | |
| !! | GTAGCGGTGTCGGTGTCCAA+TGG | - | chr2.2:49278500-49278519 | MS.gene55096:CDS | 60.0% |
| TCCAAGGGATGGCCACGACG+AGG | + | chr2.2:49279918-49279937 | None:intergenic | 65.0% | |
| TCCTCGTCGTGGCCATCCCT+TGG | - | chr2.2:49279914-49279933 | MS.gene55096:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 49277566 | 49280100 | 49277566 | ID=MS.gene55096 |
| chr2.2 | mRNA | 49277566 | 49280100 | 49277566 | ID=MS.gene55096.t1;Parent=MS.gene55096 |
| chr2.2 | exon | 49279881 | 49280100 | 49279881 | ID=MS.gene55096.t1.exon1;Parent=MS.gene55096.t1 |
| chr2.2 | CDS | 49279881 | 49280100 | 49279881 | ID=cds.MS.gene55096.t1;Parent=MS.gene55096.t1 |
| chr2.2 | exon | 49277566 | 49278956 | 49277566 | ID=MS.gene55096.t1.exon2;Parent=MS.gene55096.t1 |
| chr2.2 | CDS | 49277566 | 49278956 | 49277566 | ID=cds.MS.gene55096.t1;Parent=MS.gene55096.t1 |
| Gene Sequence |
| Protein sequence |
