AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55177


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55177.t1 MTR_5g082610 96.556 726 25 0 1 726 1 726 0.0 1452
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55177.t1 AT5G16690 46.351 740 364 8 3 725 10 733 0.0 649
MS.gene55177.t1 AT5G16690 44.476 715 364 8 3 700 10 708 0.0 590

Find 134 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCCAATATTCTTAATATT+TGG 0.154042 5.2:-70557684 MS.gene55177:CDS
TTTGAGTTTCATAATATATT+AGG 0.222185 5.2:-70549607 MS.gene55177:CDS
AGTTCTAATCGTTAATGATT+TGG 0.254979 5.2:-70558047 MS.gene55177:CDS
GCTTTATTGCGAGAGTTTCT+AGG 0.280213 5.2:-70558244 MS.gene55177:CDS
GTTTATTAGGAGGGAAAATC+TGG 0.291209 5.2:-70556677 MS.gene55177:intron
ACTGAATTGAGGCTTCATTT+TGG 0.292966 5.2:+70548989 None:intergenic
ATCAATTGATCTAGCTTTCC+TGG 0.306623 5.2:+70554091 None:intergenic
ACTCCAAATATTAAGAATAT+TGG 0.322668 5.2:+70557681 None:intergenic
CATTGCACCACATTTAATAT+TGG 0.329111 5.2:-70557528 MS.gene55177:CDS
ATGCTTATTACACTTCTCTA+TGG 0.342009 5.2:-70557292 MS.gene55177:CDS
CGCTACAGAAAATGATCTTC+AGG 0.345126 5.2:-70560220 MS.gene55177:intron
CCATCAAGAGATTCGGTTAT+GGG 0.354582 5.2:-70555177 MS.gene55177:CDS
CATTTCTTGATGATTTAGTT+AGG 0.364727 5.2:-70551132 MS.gene55177:intron
ATCTTATCAATCTTCATGAT+TGG 0.364812 5.2:-70549119 MS.gene55177:CDS
ACCTCACTCTGCGTACTATC+TGG 0.377762 5.2:+70555073 None:intergenic
ATGGAAAGGCATTCCTTCAA+TGG 0.382537 5.2:+70550646 None:intergenic
AATCATGCCTGGATGGCAAT+AGG 0.389338 5.2:+70549554 None:intergenic
TGGTGACAGTGCAGAAACTA+TGG 0.390562 5.2:-70556458 MS.gene55177:CDS
AGAAAAGAAATGAATGGATC+TGG 0.398114 5.2:-70549015 MS.gene55177:CDS
ATGTTACTTGTTAATGTCCT+TGG 0.402205 5.2:+70552729 None:intergenic
AGATCAATTGATTGAGAGTT+GGG 0.405950 5.2:-70554080 MS.gene55177:CDS
CCCATAACCGAATCTCTTGA+TGG 0.406448 5.2:+70555177 None:intergenic
TATTTAGATGACCTTAATAG+TGG 0.406645 5.2:+70558828 None:intergenic
GTTACAAGCATAAACATAGA+AGG 0.410083 5.2:+70557597 None:intergenic
GAGAATTCTCGTTGAAGATC+AGG 0.411504 5.2:-70557247 MS.gene55177:intron
GCCACAGAGTGCAAAGAAAC+AGG 0.420543 5.2:-70558938 MS.gene55177:CDS
GTGCTTCAATACTACAAGAT+TGG 0.422279 5.2:-70558656 MS.gene55177:CDS
GATGTTCTATCTTTCCTCCT+AGG 0.422464 5.2:+70559009 None:intergenic
TTTGTACAGAGAATAGCATT+TGG 0.422797 5.2:-70548759 MS.gene55177:CDS
TAATTAATCTAGGAATGAAA+TGG 0.425576 5.2:-70556523 MS.gene55177:intron
CCCATCAAGAGATTCGGTTA+TGG 0.429867 5.2:-70555178 MS.gene55177:CDS
TTCTTCAAAATACAAATAAA+CGG 0.434189 5.2:-70549074 MS.gene55177:CDS
ATTACAGAGCTGCAGATCAC+TGG 0.435760 5.2:-70548816 MS.gene55177:CDS
GGAGTAGTATTAGTTAGAAC+AGG 0.436076 5.2:+70558595 None:intergenic
GAGAAATTACTTCATCAATC+AGG 0.438660 5.2:-70557484 MS.gene55177:CDS
CAGCCATGCTCTCGTCAGTC+TGG 0.445526 5.2:+70556496 None:intergenic
AGATAGAACATCAGCAGGAC+AGG 0.447255 5.2:-70558998 MS.gene55177:CDS
TTTGTACCCATCAAGAGATT+CGG 0.461467 5.2:-70555184 MS.gene55177:CDS
ATCATGCCTGGATGGCAATA+GGG 0.465176 5.2:+70549555 None:intergenic
TGTGGCTATGCTTTCATCAA+TGG 0.468316 5.2:-70558305 MS.gene55177:CDS
TTATACAGGGATCTCCCTCC+AGG 0.471518 5.2:-70554109 MS.gene55177:intron
TCAACTTGAACCCTTCTCCT+TGG 0.471538 5.2:+70549634 None:intergenic
TGGAAAGGCATTCCTTCAAT+GGG 0.473066 5.2:+70550647 None:intergenic
GTTCTAACTAATACTACTCC+TGG 0.473187 5.2:-70558592 MS.gene55177:CDS
GAACAATTGTTCTAAAAGAC+TGG 0.473494 5.2:+70549094 None:intergenic
TAGATCAATTGATTGAGAGT+TGG 0.474857 5.2:-70554081 MS.gene55177:CDS
AAGCAGAAAATTTCATGGAA+AGG 0.476654 5.2:+70550632 None:intergenic
AGTTGCGAAGCGGTGTTGCT+TGG 0.479272 5.2:+70560252 None:intergenic
GCAAGGCCCTATTGCCATCC+AGG 0.480431 5.2:-70549561 MS.gene55177:CDS
CTTTATTGCGAGAGTTTCTA+GGG 0.484132 5.2:-70558243 MS.gene55177:CDS
CAACAGTGAATGGGTTATCA+AGG 0.485903 5.2:-70557706 MS.gene55177:intron
AAGAAGAGAAAAGAAATGAA+TGG 0.487609 5.2:-70549021 MS.gene55177:CDS
TCCTGTTTCTTTGCACTCTG+TGG 0.489886 5.2:+70558937 None:intergenic
CTGAAACATACCTCAACATC+AGG 0.490698 5.2:+70557990 None:intergenic
GCTATTCTCTGTACAAAGTC+CGG 0.494480 5.2:+70548765 None:intergenic
CGTGTAACAGAAATTATTTG+AGG 0.495540 5.2:-70550670 MS.gene55177:intron
ATCATGACATTTGAAGAGCT+TGG 0.495656 5.2:-70558355 MS.gene55177:CDS
CTCCCTTGTATGAGACTCAA+AGG 0.505106 5.2:+70557267 None:intergenic
ATATAGCAGAGTGCAGCTGC+TGG 0.506544 5.2:-70555235 MS.gene55177:CDS
AATTATTTGAGGCCCATTGA+AGG 0.507457 5.2:-70550659 MS.gene55177:CDS
GCGGTGTTGCTTGGAGAAGA+AGG 0.511147 5.2:+70560261 None:intergenic
TTCAATACTACAAGATTGGT+TGG 0.514919 5.2:-70558652 MS.gene55177:CDS
CATAATTGAGGAATCATGCC+TGG 0.517366 5.2:+70549543 None:intergenic
AATATATACTTACATAATTG+AGG 0.521423 5.2:+70549531 None:intergenic
TTCTCTATACCATGATGCTA+AGG 0.522446 5.2:+70558093 None:intergenic
ATTTAATATTGGTCATAAAG+TGG 0.523621 5.2:-70557517 MS.gene55177:CDS
CCGAGTTTATCCTGATGTTG+AGG 0.525559 5.2:-70558000 MS.gene55177:intron
GTCCAGTGCCTATATGAGGC+TGG 0.529773 5.2:-70555261 MS.gene55177:intron
GTGTATTTCAACAAAGTCTC+AGG 0.529796 5.2:+70556647 None:intergenic
AATGCCTAGCAAGAGACGTC+CGG 0.530103 5.2:-70548784 MS.gene55177:CDS
AGGAAAGATAGAACATCAGC+AGG 0.530216 5.2:-70559003 MS.gene55177:CDS
AAGTCCGGACGTCTCTTGCT+AGG 0.531164 5.2:+70548780 None:intergenic
GCTTTATGTAGCACAAAGAA+TGG 0.533751 5.2:+70559036 None:intergenic
ATTGCATCCATCCTCTCAGC+TGG 0.534653 5.2:+70557573 None:intergenic
ATATATCTGCCTTAGCATCA+TGG 0.536895 5.2:-70558102 MS.gene55177:CDS
GCATAGCCACATGACATCCA+TGG 0.544035 5.2:+70558317 None:intergenic
GTGTAATACCTTGCATGCGA+TGG 0.544964 5.2:+70556614 None:intergenic
TAATCGTTAATGATTTGGAA+AGG 0.545848 5.2:-70558042 MS.gene55177:CDS
TTACAGAGCTGCAGATCACT+GGG 0.546156 5.2:-70548815 MS.gene55177:CDS
AAATGTTGAGAAGCTTCAAT+CGG 0.551574 5.2:-70550606 MS.gene55177:intron
TGGGTACAAAACATGATTGA+GGG 0.560553 5.2:+70555197 None:intergenic
TTGCTTATATAGGTTCTGAT+CGG 0.567854 5.2:-70549661 MS.gene55177:intron
TGATCGGAGATCCAAGGAGA+AGG 0.567974 5.2:-70549645 MS.gene55177:CDS
ATGGGTACAAAACATGATTG+AGG 0.568111 5.2:+70555196 None:intergenic
TTTGCACTCTGTGGCAATCG+AGG 0.569324 5.2:+70558946 None:intergenic
ATTGAGGAATCATGCCTGGA+TGG 0.571717 5.2:+70549547 None:intergenic
GCTAAGGCAGATATATCAGC+TGG 0.573272 5.2:+70558109 None:intergenic
CGAGTTGCTACAGCAATGCT+AGG 0.576853 5.2:+70558625 None:intergenic
ATGAACTTCCATCGCATGCA+AGG 0.577936 5.2:-70556622 MS.gene55177:intron
CTGACAGAGATCGTTTGTTG+AGG 0.579077 5.2:+70555131 None:intergenic
TGTAACACCAGCTGAGAGGA+TGG 0.579811 5.2:-70557580 MS.gene55177:CDS
CCATAACCGAATCTCTTGAT+GGG 0.580991 5.2:+70555178 None:intergenic
GAACCTTTGAGTCTCATACA+AGG 0.585222 5.2:-70557270 MS.gene55177:CDS
AATGATTTGGAAAGGTGTTG+CGG 0.585902 5.2:-70558034 MS.gene55177:CDS
AATTACTTCATCAATCAGGA+TGG 0.587754 5.2:-70557480 MS.gene55177:CDS
ATTGATCTAGCTTTCCTGGA+GGG 0.588515 5.2:+70554095 None:intergenic
ATAGAAAGGATACTGAATTG+AGG 0.589716 5.2:+70548978 None:intergenic
TTACAAGCATAAACATAGAA+GGG 0.589748 5.2:+70557598 None:intergenic
AAAGCACTGTACAACTTCCC+AGG 0.592412 5.2:+70558574 None:intergenic
CATAGCCACATGACATCCAT+GGG 0.593267 5.2:+70558318 None:intergenic
TCTTCAGTAAGATGTCAAGA+TGG 0.597120 5.2:-70552772 MS.gene55177:CDS
TCATTAACGATTAGAACTAG+TGG 0.601158 5.2:+70558052 None:intergenic
CCTCAACATCAGGATAAACT+CGG 0.603715 5.2:+70558000 None:intergenic
CTAGCATTGCTGTAGCAACT+CGG 0.605007 5.2:-70558624 MS.gene55177:CDS
GAGTTCACGCAGGAGTTCCA+AGG 0.607218 5.2:-70552746 MS.gene55177:CDS
TTCTAACTAATACTACTCCT+GGG 0.610671 5.2:-70558591 MS.gene55177:CDS
TTTATGACCAATATTAAATG+TGG 0.610855 5.2:+70557521 None:intergenic
TACATAAAGCTTCACCTAGG+AGG 0.612375 5.2:-70559023 MS.gene55177:CDS
AAACATTCAAGAGCATGTGA+TGG 0.614366 5.2:+70557624 None:intergenic
ATTTGGAGTTGCAACGACAG+TGG 0.616506 5.2:-70557667 MS.gene55177:CDS
AGGTTCTGATCGGAGATCCA+AGG 0.618514 5.2:-70549651 MS.gene55177:CDS
AACCTTTGAGTCTCATACAA+GGG 0.618661 5.2:-70557269 MS.gene55177:CDS
ATTACTTCATCAATCAGGAT+GGG 0.621227 5.2:-70557479 MS.gene55177:CDS
TGCAGTTGCTGTAACAAGAG+TGG 0.622575 5.2:-70549583 MS.gene55177:CDS
TACTCACTAGCTCAAGAGCA+CGG 0.623286 5.2:-70549144 MS.gene55177:CDS
TATATTTAGGAGATGTGACA+AGG 0.623368 5.2:-70551185 MS.gene55177:intron
GATAGAACATCAGCAGGACA+GGG 0.624891 5.2:-70558997 MS.gene55177:CDS
GCCAGATAGTACGCAGAGTG+AGG 0.628401 5.2:-70555074 MS.gene55177:intron
GATCGGAGATCCAAGGAGAA+GGG 0.638280 5.2:-70549644 MS.gene55177:CDS
AATTACCGCAGATATTTCAG+AGG 0.639691 5.2:-70554053 MS.gene55177:intron
CGTTTGTTGAGGACAACCCA+TGG 0.646257 5.2:+70555142 None:intergenic
ACTGACGAGAGCATGGCTGA+AGG 0.646759 5.2:-70556492 MS.gene55177:CDS
TGACCAGACTGACGAGAGCA+TGG 0.647038 5.2:-70556499 MS.gene55177:CDS
TATTCTATCATGCAAAGTGG+CGG 0.648910 5.2:-70555105 MS.gene55177:CDS
CAATATTCTATCATGCAAAG+TGG 0.651434 5.2:-70555108 MS.gene55177:CDS
TGCTTGTAACACCAGCTGAG+AGG 0.653102 5.2:-70557584 MS.gene55177:CDS
AAATACCTCTGAAATATCTG+CGG 0.660241 5.2:+70554048 None:intergenic
AATTGATCTAGCTTTCCTGG+AGG 0.669467 5.2:+70554094 None:intergenic
TGCTACATAAAGCTTCACCT+AGG 0.686005 5.2:-70559026 MS.gene55177:CDS
TTGCTGTAACAAGAGTGGCA+AGG 0.708185 5.2:-70549578 MS.gene55177:CDS
GAAATCCCATGGATGTCATG+TGG 0.723550 5.2:-70558323 MS.gene55177:CDS
GGTTGAAGGAAGTTGCGAAG+CGG 0.731712 5.2:+70560242 None:intergenic
AAGATGGAAAGAGTTCACGC+AGG 0.747231 5.2:-70552756 MS.gene55177:CDS
GCAGAAACTATGGAGCACTG+TGG 0.787321 5.2:-70556448 MS.gene55177:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.2 gene 70548752 70560289 70548752 ID=MS.gene55177
chr5.2 mRNA 70548752 70560289 70548752 ID=MS.gene55177.t1;Parent=MS.gene55177
chr5.2 exon 70560221 70560289 70560221 ID=MS.gene55177.t1.exon1;Parent=MS.gene55177.t1
chr5.2 CDS 70560221 70560289 70560221 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70558840 70559058 70558840 ID=MS.gene55177.t1.exon2;Parent=MS.gene55177.t1
chr5.2 CDS 70558840 70559058 70558840 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70558563 70558737 70558563 ID=MS.gene55177.t1.exon3;Parent=MS.gene55177.t1
chr5.2 CDS 70558563 70558737 70558563 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70558231 70558400 70558231 ID=MS.gene55177.t1.exon4;Parent=MS.gene55177.t1
chr5.2 CDS 70558231 70558400 70558231 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70558001 70558131 70558001 ID=MS.gene55177.t1.exon5;Parent=MS.gene55177.t1
chr5.2 CDS 70558001 70558131 70558001 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70557449 70557722 70557449 ID=MS.gene55177.t1.exon6;Parent=MS.gene55177.t1
chr5.2 CDS 70557449 70557722 70557449 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70557248 70557319 70557248 ID=MS.gene55177.t1.exon7;Parent=MS.gene55177.t1
chr5.2 CDS 70557248 70557319 70557248 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70556623 70556690 70556623 ID=MS.gene55177.t1.exon8;Parent=MS.gene55177.t1
chr5.2 CDS 70556623 70556690 70556623 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70556443 70556533 70556443 ID=MS.gene55177.t1.exon9;Parent=MS.gene55177.t1
chr5.2 CDS 70556443 70556533 70556443 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70555075 70555277 70555075 ID=MS.gene55177.t1.exon10;Parent=MS.gene55177.t1
chr5.2 CDS 70555075 70555277 70555075 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70554054 70554123 70554054 ID=MS.gene55177.t1.exon11;Parent=MS.gene55177.t1
chr5.2 CDS 70554054 70554123 70554054 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70552736 70552821 70552736 ID=MS.gene55177.t1.exon12;Parent=MS.gene55177.t1
chr5.2 CDS 70552736 70552821 70552736 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70551133 70551198 70551133 ID=MS.gene55177.t1.exon13;Parent=MS.gene55177.t1
chr5.2 CDS 70551133 70551198 70551133 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70550607 70550682 70550607 ID=MS.gene55177.t1.exon14;Parent=MS.gene55177.t1
chr5.2 CDS 70550607 70550682 70550607 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70549544 70549671 70549544 ID=MS.gene55177.t1.exon15;Parent=MS.gene55177.t1
chr5.2 CDS 70549544 70549671 70549544 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70548991 70549167 70548991 ID=MS.gene55177.t1.exon16;Parent=MS.gene55177.t1
chr5.2 CDS 70548991 70549167 70548991 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
chr5.2 exon 70548752 70548857 70548752 ID=MS.gene55177.t1.exon17;Parent=MS.gene55177.t1
chr5.2 CDS 70548752 70548857 70548752 ID=cds.MS.gene55177.t1;Parent=MS.gene55177.t1
Gene Sequence

>MS.gene55177

ATGGCTCCTTCTTCTCCAAGCAACACCGCTTCGCAACTTCCTTCAACCGCTACAGAAAATGATCTTCAGGTTCTTTTCCCATTCCATTCATTTCTAGGTTTTCTTCTTAACTTCAAATTCTTGTTTTATTCCCAAACCATTTCATCACTAATTTTACTAATTTCTTCAAATGCAATCATATTATTTGAGCAAATTAGTGTTTAAAAAAATGTTCAGAGTTCAGACTCTATTGAAATGTCAAGTTGGTCCGTATAATTAACCACTTACCATTAACTAGGTCCCAATATTTTAACAATTTACTACCAGTTTGATCCTTATATTAACCACTTACTATCAATTTAGTCCCTAACATATTCTCAGAAGAACTAATATGAGTAAAATTTGGCGGAGTCATAAACCTTTTTTGAAAGATCATAATTTCAAGAATCTATTTGATAGCGATTCACAAAGTTAGGGACGAGTTTGGTGGTTCACTCCTTATTGTTTGTTTGATGATGAGTCATTTTGTGTTTCATAACTAGGATCCGTTTGGATTCATTATTTTTGAGATTATGAAAAATAGCTTATGCAAATAAATAAGCTTTTATATTAATTCATAAGTTCTCAGCAACGAAAATTATATCTTCATAAGCTGTTTATGAAAAAACAGCTTGTGAAGATACATAAAAGCTTATTTTTGACATAAAAGCTTATTTATTTGCATAAGCTGTTTTGCATAAAAATAAGCCAATCCAAAGGGGCCGCAAGTCAATATAATAATGTCAAGTTTATAGGCTTTATAATTTTTGCTGCTACTTACTCACCTTCATTCTTAGTTTCTATACTGTCTATCAGTTAATGTTATTCTTTATCAAGTCAGTGTTGGTATTTCCGGCCGTGGCGCCTCCGTGGCCATAACCAATTTCTGAAGGGATGTTCTCCATGGCAGAGGCTTTTGGCCGCATTAGTGTGTTTATCAGTGTTGTGAATTGCAAATCGCGGAAAATAGATGTTTGTTCAAATTCTGCTAGTAACAGTGCGGTAGCACCGCTGGAGTGGCTAGTTCTCTGTATTTTGTACTAAATAGCGTATCGCAGAACAATAACGATTTATTCGAATTAAGATGATATAGGGGAAGACAAAATTTATCAAGTTCCATTGGGTTTAAAGCCTTTGTTTGAATTTACCTCCTTGCTACTACAAATAGAATGCTGATTCAATCCTTATTTGTTTATTTCTTTGGTTTTGACAGCCATTCTTTGTGCTACATAAAGCTTCACCTAGGAGGAAAGATAGAACATCAGCAGGACAGGGAAAATCTCGCAAAAGAAATGAGCTATCTCCTCGATTGCCACAGAGTGCAAAGAAACAGGAAGAAAGTACAGATGAAGAATGTGATCGCTATTTGTGTCAGCAACAGCAGATTGAAGCTTTTGATATTGTTTGGACAAAAATTGAATCCACTATTAAGGTCATCTAAATATCTTCTCCCATGTCATGTAACTTACATTGGTTTTGGCCGTATATTCCTATAAGAACTAGAATTTATCGAATAGCCCTCTTTCTATTGTAGGACGTCTTGAGAGAGCTCAATGCTAGTGTATTCAATAATATCCAAAAATGGGTTCAGGAGTGCTTCAATACTACAAGATTGGTTGGAGAACCTAGCATTGCTGTAGCAACTCGGTCTTTTCCTGTTCTAACTAATACTACTCCTGGGAAGTTGTACAGTGCTTTAGTTGTTACCAGTAAGTGTTTTCACATTTTTGATAAATCCTATGAATTCATTGACAGTCCACCAATTCTACAATCATGCAGCCCAATATCAATTGGCCATGTACTATAGTATGAGGAATGAAAAACCATTTGTTCCTCCTTATGAAATTCTGAGATTGAACTATGATTGGCAGGAAACATAGAGTTTGTCGATGACATCATGACATTTGAAGAGCTTGGCATTTTCTTGAAATCCCATGGATGTCATGTGGCTATGCTTTCATCAATGGAGTTTTCGTTGAAAAATGGAATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGAATTCTTTTGATGTGGGTGCTTCTATGAACTTATTACGTATAATTAAATTAAATCTATCTACTGCCACTGTCTCCTTTACTTATTCATTTCTCTATGTTGTTGTTAAGTAGCCAGCTGATATATCTGCCTTAGCATCATGGTATAGAGAACAAGAAAACTACAATAAACCACTAGTTCTAATCGTTAATGATTTGGAAAGGTGTTGCGGATCAGTCTTAACCGAGTTTATCCTGATGTTGAGGTATGTTTCAGCATCTTTTGTAAGTGTTTTTGCCTGTATATTTGTAACCTCATTTGTATCTGTTCATCTTGAATGTTTTTGGTTGTTCTAAAGCTTCCTCCAACTATGGTGGAGCTCTGTAACAAAAAAGTTTATTGTATATTGCTGACATTTAGAGATTGTAATTATTTTGTTTATTTATTTTAATGTATAATATAATGGTAATGGTATTTTTCTGCAAAGGCAAAGGATAATGACAATGATATGAATTGGTTATAATCTTCCATTTTTTGCAACAGTGAATGGGTTATCAAGGTGCCAATATTCTTAATATTTGGAGTTGCAACGACAGTGGATGCCCCAAGAAACATTTTTCCATCACATGCTCTTGAATGTTTCTGCCCTTCTATGTTTATGCTTGTAACACCAGCTGAGAGGATGGATGCAATTGTTGAAGCTATTCTTGTAAAGCATTGCACCACATTTAATATTGGTCATAAAGTGGCACAGTTATTGAGAAATTACTTCATCAATCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTTAATGATGCAATTTTTGAGTTACTGTCTGTTTTCTGTATTGTCATTTTATGAATTACATAGACATTAGACAGTGACAGGATATATGACCTACTATTTTACATGTCTGTTTTCTTACTTATCTTTCAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACAAGGGAGAATTCTCGTTGAAGATCAGGTCCGTCGTCTAATATTTTACTCACTTTCCTTAATTTGCTCTTCAAATATGATCTGCTTCACAGATATATAGGGGTCTTGTGTTTTTAATTTGTATAAGGTCATTTAGCCCAAGCCAGTCTAGTTTTCTTCAGTTGATTTAGTGTTTTATCTGTGCTCTTGTAACTAAAATTTAAACATTTCAACATATGGAAACAAGCACTTCATCTTTTGATTAGTTGTTAAGGAGAACGATACAAAGTGTTAGTACTAAGAAGTGTTTGTCACGAGAGTACTCCCCGGTGCGACACATAAAAAGTTGCATCGCGGATGCCCCAAGTTATAAGTAATAGAAAAAGTTTATGCATACAACTTTCTCCCAAAATATCATTCAAACACTATTGATTGGAATCTTTACTTCCATGATTCATTGGGTTCAACCAATGCTATTATATGTTCCTATAATTTAGTTGATCGAAAACTTGCCCTGAACTTTTCTTGCTCAATATTTTAATAATTTCTTACCATCATTCCTTTTTTTATTATTGTTTTAATGATTGGTTAAAAATGGTTTATTAGGAGGGAAAATCTGGATTATCACCTGAGACTTTGTTGAAATACACGCATGAACTTCCATCGCATGCAAGGTATTACACTTAACAGATTTTCAGGTTCTTATTTAGATTTTCTTAATACAGATAACATTGAGTCCACCTTTTGGTTATAATTAATCTAGGAATGAAATGGTTGACCAGACTGACGAGAGCATGGCTGAAGGTTTTTCAGAATTGGTGACAGTGCAGAAACTATGGAGCACTGTGGTTCTCGTAAGATTTGGGAATTACTTTCAAATTCTTGTGTACTCATCCTCTGTTTTTATTGGTCAAATTCCACTTCTTTTATCAATTGATGACGGTTTAAACAATCCAAATTAGCTATTAGCACATTATATAATATGGCCATTCACATAGTCGACTCTAAAACTGAAAAAAGGAATTCATGTAGTCGATTGTAATATAAACTTAGGGTTTGATCATACTCTGAGTCATTTATGACATTTAACACCTAAAATGATGCAAATTTACTTACAAGAGGCACGCCGCATCCTCCTACTCATCAGGGCCTGGTCCTTGCCCCAACGGCCGGGTATAGGTCGTGCACTTTAGCGCCATCCATTTTCGGGGCTAGTTGATCCGGCAGGTGAGTTGTTACACACTCCTTAGCGGTGATGTGGGTTGCATCCTTCTTACAGGTGGGATAACAGAGTGTTCCCAGGCCTCCTGGAAACTGAGTTTGTCAAGATGCTAATCGAAGTGTCAAACTAATGCATTTGTATGAAGAATGGTATTGCCTGTGGATGCTTCCCATTGAACCTATACAAATAACAGTTAGCATGATTTAGTTGGGAAATAGTACTATCTCACCTACTGTTGGGGGTATTGTGGTTTTTTAGGATATGTGATCCCCAATTATTTTGTATCCTTCATGTGGGTTTATACTAGATTTCTAAGGCTAGGTTTTCTTGATGGTTAAGACAAATTGAAGGAAGAACCAGCTAGGATATAGGCGGGGTGTACCCTGAGTCTGGTCCCTTGTCAGAACATTCTAACAGATGGTTATCCAAGAGTAAAGTATCCCGGAATAAAAACAAAACCAAAAATGTGGAAAAGCCTATGTTTTCTTGATGACAAAGCACCGTTGCCATGTATTAATACACATGCCATAGTTATTTATTCTAGTGATATTTTGAAATAGTTATCTTTTAATACTTATGTGTCGATCTTGAATATTTTTTTTCGCATGGTTAAGGTTCCATGTGACTCTGTTTGCTTTGATGATAGATTTTTGTTGTTTATTCCCATTTAATTATCGGTGTTACTGGTCAAATTCATTTCCAAATATTTTTTTTCTTTTCCGAATGAAATTGTTTGGCAATTAGTTGTTAATGTGGCTGAATTGGAGTTCATCATACTGAATTTTCCTTTTGTCCAGTGCCTATATGAGGCTGGAAAATATAGCAGAGTGCAGCTGCTGGATTTGTTTTGTGAGTCCCTCAATCATGTTTTGTACCCATCAAGAGATTCGGTTATGGGTGATGAAAAAGACCATGGGTTGTCCTCAACAAACGATCTCTGTCAGCAATATTCTATCATGCAAAGTGGCGGTTTTATTTGCCAGATAGTACGCAGAGTGAGGTAACTAGGAATATGATACTTGCTTTCTTTTATTTTCCATAAGAATCTTGTTTATGCCGAACAATATCTGCTCTTAGGAGAAAACTAGATAGGAGACCTGTGCGATTCACAGGTAAATCATGCAAAAGTGAACAAATTTTAGTCTTCATATATCAAAATATTATTGTCACTAGATATAAATATTTACTACTGAGGAATAATACTATTTATCATCTAAGAGATTGTTCATATTTAAGACGTGAAAAAGTGGGCTTAATAGTAAGACTAACATCTTAATATTTGCATTATAATAGAAGTTTAAAATGTTGTACATAGTATATTTATTACTAGTTTTGGTCAAAAAATTTGGTCAAAAAAAACTAGTAATTTTATTCGGCCCATTAGTCCATTAGTCAGTCCCATTAGGTTAGAATAGCCTATACAAAGAGATTAATGCTTGCACATAATGTAGAACTTCAAATATATTACTCAGTTTTCACGATAAATATAAAAGTTTAATATTTGCATTAAAATCTTAAACAGAAACTGAGGTATGATTGATAGATAAGCCATAAATGTCATAAAATATTGTATCCAAAGAAAACAATTATGAGCTACCTCCTTATATTACTGCAAGAGTATTCCTTCCAGTGCCTATATCTGATAGTTGGAAAGAAATTGAATAACTATAAAAGCCTAAAAGAAAAGGAGTAGGATTCCAAATACTGCAACAAACCAAACATTATAATGTCTTCAGTCTTAACTAAACCCTAAATGATAATATCAAAATCAAATTGCAACTTCCTTCAATTTGTATTTGTCCATCTAAACCTTTCTTGGTGAACTTTAATATCAACTTTCTAATTACGACTGTTATAGATATCTTTATACTTTGTTGATTTAGACACTTCACTCAAGCCTTATTTTTGTTTAGTTCAAATATCTTTAGACTTCTGATTGGAAATTATACAGGGATCTCCCTCCAGGAAAGCTAGATCAATTGATTGAGAGTTGGGATAAAATTACCGCAGATATTTCAGAGGTATTTTCCACTTGAATATTTGTTTGCTTGGAATTTTAATTTCATTTTTTTGTTGGGACTGTGATATGGTGTAATTTGGATCCCATTGTTGAATATTTGTAACTTAGATGACGAAAGTCGCTTATGCTCTCTTTTTAGTGCTTGCCAACAAAAGGTCAGGAAGCTTATTGTGCCCAACCCATTGACCTTAGTCTGCTGCAAGTGCATTGCTATCTGGAAAGATTCTCTGTAACTATGGTATATTAGCGTATAAACAAGAAAAAGTAGATTTAGTGGTGTTGGTTGTGTCAGATAAACTTATGATTTATGTACGTGCTTAGACGAACTTATTAAAATAACTTAAATATGCACATATGCTGTTTTCAACTTATTTTCATAAGCTCTTCTATATACCTTATTAAAAAAACAGCATATAAGATTTTATGTAGAGCTTACACGCATTCCCTCTTCAATTTTAGGAAGAACTTATAAACAAGTTTTTATAAAATAAGAGCGTATTGAATAAGTTTCTAATTAAGCTGTTTACCAAAACGCTCCTTAATAAAACTAGTTACGCAGGACCAATCATTGCAGTAAATCCGGTAATTACATTAGAATCGAGATGAACCGTGTTTTTGTGTTTAAATTTATTTGTTTTTGCATGGAGGGATATTTTTTTGGGGGGAGGACTACAATTTATTGATTTCTGGTAAAAACATATTATACTTTTAGTTCAGGAATGATTGTATAGACCAGTGTCAATAAAGTTACTGGTACTGCATCTAGTTACCATCTTTTTCTATTGGAATTAAACTTAACTAGAGGTTACTTTTTGGGTAATCTGCATCTATTGGTCTTAGGGATGGTTTGGGAATAGAAATTATCTTCTGATTTCTTGGGAGAGTTCTACAGGCATGAAAAGAAGGAACTCCATGATTATTAAGTGGTATAGAGTTTTCTACGAGAAGTTGATAAGGATTTGCTAGAGACTTCTGTTCTAAACTACTCATTGGATGAGAGAAAGTAGAGACATAATATTGTCACACTAAGTGTTTCAACTACACAACGGAGTCAATTTTGTGTAGGTTCAAGACAATAAAAGCAAAATAAATATAGGAGAAATTTTTCCTATTCGTATGATATGCATGTACGATAATACTATACAATAAATACAAAGATCATACTTATTTTCACTATTATGAACCTTGATTCCTGATCAGTGCTAATAATTCCCGAATGACGATTTCTTGCAGATTCATGAGAAACTGAAAATCTTGCAATCTTCAGTAAGATGTCAAGATGGAAAGAGTTCACGCAGGAGTTCCAAGGACATTAACAAGTAACATTCTAATTCTCTACTTCACTGTTATTTCAGATAGATCATAGTTTAGTTGTGTATGTTAATTGGTCACGGGGTTCAGGTACTTTCTTCTTTGTTAAAGGTGACAAAAGTAAGCCATTCAAATGGAGAGGTTCCTTGGCCTAGGAAATAGATTGCTCAAAAGATAAGAATAAAGTCAGAAAAGAAATAATCATCGCGTCTTTTGTTTTTCAAAATGGCATAATTTGAAATAAATTATATTTTCTCGGTAACAGTAGTGGTTGAATTAGTGGTTGAATTATAATACAACATAATGAGAAGTGGATGCATAGTTAAGTTCTGAAATGAACAAATCAATCATCCCATTAGTATAGTAATATTTTTAGTGTTAAATATGTTTTTATTCCCTCTAAAATCACGACCTTTCAAGTTTAGCCCCTAAATTTTTTTATTCACTTTTAGTACTTGTTTGGTGGGAGTTGTTGAGTAAGTAAATTCTACTGGAGAGTTGGGGTGCTCTTGAATTAACCAGAATCATGTACGACATTTGTTCCCTCATGTTACATTGACTACTGGCATTCAAATAAAAATTTCCTTTCTTCTCTGGTTCTGTGTTTTTCTATTAATTTCCCTTCTACTACCAGTAGAGTCTATTTGGTATCCTTTAAATATTTGGAGTAAAATAGAAGTTATCATTCGTATTTTATTGAATAGTGTACAATATTAAGTTGAAGCTTTTCTGAGCAAAGAGCTAAAAAATCATGTCTTGAAAAAATTTCCGCTGTTATTGACTTATTGTCATAATTTGAAGGCGTAACTATGCCTCATTTATGACATATACTTGCATTTTTGGCTTCTTTCGGGCTACGTTCATCAAGTGGCTCTCGGAAGTTACTTCTGTTATATATGAGTGCTGTCAATAGCGCGCTATAGTAGTGGTGTATCAGAGCTGTCCCTGGCTTCTACAAGCCATGCCATAGCAGAGCACTTCAGTGTTGCAGCCGTAGCAGTTGCCATGGCTGCTACAAGCCAAAATAGCGGCTGATATAGCGTGGTACTTCATGATAAGATCGAAATTCCAAAAACTCCTTAAAATTTAAATGGTAGAACTTTTTGATTGGCTATTTTAGGAATTTTGCAACTAAAACATCATAACAACGTTTGTGCTTCTCTCTCACTCTCTCTCAGATAGATTCGTTCATGCTATCTTATTTCACTCTCTCACGTCTCACCTGTCGATCACAGCTAGTTATTGAATTTTTATGTATGTAGTAAAATTTAAATAAACTATAAAAATTCCTAGATGCTGGTGATCTCGTTATCCGCTATCTCACTGTAGTGTTTTATGGCTGGCTTCTACTCTCCCCTATTTGGGATTCATAACCAAGTTCTTATGAGACGGTGTATTGCCTTCTTTACTTTGGCTGTCACTTATCAAGAAGGATTTCTTGTCCGATACTTACAATTCTCTTTCTTCTAATGAAGTCTTCTTTAGTTTTTCCTTAAATGATTGTTTTTTTATCCTTTAATTAAGTCTGATTATTTATATATTTAGGAGATGTGACAAGGACTCGAGAATGTCAAACTTGCAAGCTATCGCATTTCTTGATGATTTAGTTAGGTAATGTTTAATATTGTCACCACGTTTTATTTTCTTTATGTTATGCCCAAGAATGAACTTGCTAGCTCATACACAGCCAAAGTGACTTGTTTATTTTTGTTGACATCATTTATGTTGAAAATATGAAGATCTTGTTGGAATGTTGATTCATTGGACTAATCAATTTTGGGGAAAGGCTCTCATTTGTAAATCAAGCCAATAAAAGCAAAGCATTCCTCCAATAAGAAATAATAGTCTTCTCTCAAATAACTTCTCTTCCCTAACTCCCACAAGTTTTCTAAAACCCCTTCTCCTTTCCAACAAAGCTTGGCTTGTTGCCTTCTTTTTGTCTTGCTGCATTGAAGTAAAATATAAAATCACTCTTTATTGTTTATGTATTAAGTTAATCTTCCATTTTTTCAACGCTGGTTATTTAAGTACTGTTACTGGTCATTCTTTTTCGTGTAACAGAAATTATTTGAGGCCCATTGAAGGAATGCCTTTCCATGAAATTTTCTGCTTCAAAAATGTTGAGAAGCTTCAATCGGTAAGAGATCAAGATATGCATTCCCCCATTTTATGAATATTCCATTCACTTCACCCACTGAAGTACAGCTGGAATTTATCTCGGAACTAAATACTAATTACTTTTAGATGATAAATCATAACTCTGACTAAAATGTCTGCATTATTCACACTCTTAATATGTTTGTTCAGGAGTGCAACTTAGTTACACTTGATGGTAACCTTGACAAAATAAGAAAATATACCTTTCAACCTGAATGAATGTGTTTTTGCAAGATAACCTGAATTAATGCATTTGTTTCATAATAAAGTTTTTGATAACACTGCTCTATTGTGGGAAATAGGACGACTACCCGGTATTAAATAACTGCAAAAATTTAATGTTTTCCAAAGAATTAAATCCGCAAATATATGTAACTATATATGATATTTCATGAAAAAAATTATTTTCATGCTCATTAGCAGCCATTCCAACAGGCACCTTATAATCAAGGTGTACTTTTGAAAGAGGAGGGGATGTGTGATTTGGCAGTTGGGAGTTGTATTAGACCAACAGACTCAACAGAAGACAGTAAGTGGGGTAGCAGTGAACAGAATGTATATGAGAGGGCAAAGAGAGTATTAGATGCACATACTGTAAGGCTGGGAAAGGTGTAGGGCTCTTGATTTTGCTAAAGCTTTATTTTGTCTTCAAGCTCACATTGAGCAAGCAGTTCATTGTGTTCAATAGAAGAAGTTTCCTTTTATTCTTTCTTTTCGCTCTTGACATCAGTTGCTCTTAATACATTCATTGCGATTCCTAAGTTTGAAAATGGACATTTTGGCTACACAGATCATTATTTATATAACCTGCGAATAATAAGATTACATTCCTTTATTATTTTTTTATGCATGGGATTTACAGTGCAACTGGGTTATATGAAGTTTAACACACTATATTACTTCTTGCTTATATAGGTTCTGATCGGAGATCCAAGGAGAAGGGTTCAAGTTGATCTGTTTGAGTTTCATAATATATTAGGTTGCAGTTGCTGTAACAAGAGTGGCAAGGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTAAGTATATATTTTGTATGGTGCTTTCATATAGCATATCCTTTAACTTTTTGATAATGTTGTCTTCTTTGCTCAGATAGTTATTTCCATGTTTATATTAAGCCATCCTAAATTTATTAGTATAAATTACCCAGCTTCTCATTATTATACCATAATTGCCTCAAAATTCATGTCAATAGATATTTGTAGAGGTCAAAGGTGGGCAAGAGAGAATTCATGATAGTGATGTTTATGATAACCTTGAACCATAAATACCTAACGTTGATTTTGTTAGATAACCTTGATTCATATCATCTCGCTTTAAACTTTCTAGTATTATCTCCTGTAACATGTTAAAGCATCACACAAGATTTAAGTTGACATTTTTTTTTTGCAGGTACTCACTAGCTCAAGAGCACGGAGATCTTATCAATCTTCATGATTGGTTCCAGTCTTTTAGAACAATTGTTCTTCAAAATACAAATAAACGGAAGCAAAAATCGAAGCAGACCCCTGTATCAAAGAAGAGAAAAGAAATGAATGGATCTGGAGACCAAAATGAAGCCTCAATTCAGTATCCTTTCTATTTTTCATTTGACAATAACTTGATAGCACTAGGCATAATGCTTCAAGTGCATTACTAGAGCTATAGTGACTGCAATGCATTTTGTATATTTGTCATAATCCTTAACTTTGGTTTGTCACAGAGCGCGATTTTGCAGCGGAATTACAGAGCTGCAGATCACTGGGCTAGTTAGAATGCCTAGCAAGAGACGTCCGGACTTTGTACAGAGAATAGCATTTGGAATTTGA

Protein sequence

>MS.gene55177.t1

MAPSSPSNTASQLPSTATENDLQPFFVLHKASPRRKDRTSAGQGKSRKRNELSPRLPQSAKKQEESTDEECDRYLCQQQQIEAFDIVWTKIESTIKDVLRELNASVFNNIQKWVQECFNTTRLVGEPSIAVATRSFPVLTNTTPGKLYSALVVTRNIEFVDDIMTFEELGIFLKSHGCHVAMLSSMEFSLKNGIAGCLKALLREFLGNSFDPADISALASWYREQENYNKPLVLIVNDLERCCGSVLTEFILMLSEWVIKVPIFLIFGVATTVDAPRNIFPSHALECFCPSMFMLVTPAERMDAIVEAILVKHCTTFNIGHKVAQLLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGRILVEDQEGKSGLSPETLLKYTHELPSHARNEMVDQTDESMAEGFSELVTVQKLWSTVVLCLYEAGKYSRVQLLDLFCESLNHVLYPSRDSVMGDEKDHGLSSTNDLCQQYSIMQSGGFICQIVRRVRDLPPGKLDQLIESWDKITADISEIHEKLKILQSSVRCQDGKSSRRSSKDINKRCDKDSRMSNLQAIAFLDDLVRNYLRPIEGMPFHEIFCFKNVEKLQSVLIGDPRRRVQVDLFEFHNILGCSCCNKSGKALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNTNKRKQKSKQTPVSKKRKEMNGSGDQNEASIQARFCSGITELQITGLVRMPSKRRPDFVQRIAFGI