AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55314

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55314.t1 MTR_5g042920 92.414 435 30 2 1 434 1 433 0.0 828
MS.gene55314.t1 MTR_4g082580 55.011 449 110 13 15 433 2 388 2.60e-141 409
MS.gene55314.t1 MTR_7g011820 48.438 512 158 14 22 433 14 519 5.85e-137 403
MS.gene55314.t1 MTR_3g056100 53.386 251 108 3 145 395 91 332 1.04e-82 261
MS.gene55314.t1 MTR_3g056100 46.512 86 45 1 135 219 240 325 9.24e-17 82.4
MS.gene55314.t1 MTR_5g094430 48.160 326 140 9 124 430 29 344 2.42e-82 259
MS.gene55314.t1 MTR_5g094430 48.160 326 140 9 124 430 51 366 3.61e-82 259
MS.gene55314.t1 MTR_7g100510 41.337 404 182 11 25 398 60 438 4.99e-82 259
MS.gene55314.t1 MTR_3g056100 53.386 251 108 3 145 395 235 476 1.58e-81 262
MS.gene55314.t1 MTR_3g056100 46.512 86 45 1 135 219 384 469 1.06e-16 82.8
MS.gene55314.t1 MTR_5g094430 41.850 454 197 17 26 430 43 478 1.69e-81 261
MS.gene55314.t1 MTR_3g056100 52.692 260 109 4 145 395 91 345 3.76e-81 257
MS.gene55314.t1 MTR_3g056100 45.455 88 47 1 135 221 253 340 1.02e-16 82.4
MS.gene55314.t1 MTR_3g056100 52.692 260 109 4 145 395 235 489 5.55e-80 258
MS.gene55314.t1 MTR_3g056100 46.512 86 45 1 135 219 397 482 1.16e-16 82.8
MS.gene55314.t1 MTR_3g009470 45.897 329 114 8 151 416 278 605 8.32e-79 258
MS.gene55314.t1 MTR_7g071120 53.878 245 81 5 150 383 163 386 1.32e-77 249
MS.gene55314.t1 MTR_3g031220 49.624 266 122 4 130 389 175 434 4.18e-77 248
MS.gene55314.t1 MTR_5g074400 51.515 264 94 7 148 389 238 489 2.27e-74 243
MS.gene55314.t1 MTR_7g080020 47.887 284 101 5 150 387 277 559 9.50e-74 246
MS.gene55314.t1 MTR_4g013260 47.826 276 113 8 109 383 153 398 8.03e-71 232
MS.gene55314.t1 MTR_7g080000 48.485 264 106 5 150 383 231 494 3.31e-68 230
MS.gene55314.t1 MTR_3g031220 44.700 217 109 3 130 341 175 385 5.56e-51 177
MS.gene55314.t1 MTR_3g031220 52.000 75 31 2 312 382 185 258 9.14e-16 79.0
MS.gene55314.t1 MTR_5g097490 39.852 271 134 6 135 397 75 324 4.63e-50 174
MS.gene55314.t1 MTR_3g009470 40.714 280 107 7 120 341 237 515 2.33e-49 176
MS.gene55314.t1 MTR_3g009470 58.333 60 24 1 321 380 280 338 2.83e-14 75.1
MS.gene55314.t1 MTR_4g130900 39.357 249 139 6 144 383 176 421 2.80e-48 172
MS.gene55314.t1 MTR_4g130900 56.250 64 27 1 154 216 360 423 2.01e-16 81.6
MS.gene55314.t1 MTR_1g077780 52.597 154 58 2 264 416 4 143 1.52e-47 160
MS.gene55314.t1 MTR_1g077780 51.667 60 28 1 153 211 62 121 2.29e-14 70.5
MS.gene55314.t1 MTR_5g097500 30.827 266 163 4 122 387 52 296 2.42e-33 127
MS.gene55314.t1 MTR_5g097500 36.735 98 60 2 116 211 192 289 1.93e-11 65.1
MS.gene55314.t1 MTR_1g086790 50.877 114 56 0 267 380 104 217 2.98e-32 125
MS.gene55314.t1 MTR_1g086790 58.065 62 23 2 153 213 158 217 1.44e-15 77.8
MS.gene55314.t1 MTR_4g094588 43.056 144 76 1 261 404 118 255 2.61e-31 122
MS.gene55314.t1 MTR_4g094588 58.333 60 24 1 153 211 178 237 8.06e-16 78.6
MS.gene55314.t1 MTR_7g109800 61.176 85 33 0 306 390 130 214 4.84e-30 118
MS.gene55314.t1 MTR_7g109800 61.290 62 21 2 153 213 145 204 2.68e-16 79.3
MS.gene55314.t1 MTR_2g033820 65.789 76 26 0 306 381 188 263 1.01e-28 116
MS.gene55314.t1 MTR_2g033820 60.000 60 23 1 153 211 203 262 3.04e-15 77.4
MS.gene55314.t1 MTR_8g007270 60.241 83 32 1 304 386 137 218 1.74e-28 112
MS.gene55314.t1 MTR_8g007270 63.793 58 18 2 153 208 154 210 1.40e-16 79.0
MS.gene55314.t1 MTR_3g095080 62.162 74 28 0 304 377 127 200 2.67e-28 111
MS.gene55314.t1 MTR_3g095080 50.000 78 33 3 153 228 144 217 8.01e-15 73.9
MS.gene55314.t1 MTR_3g095080 62.162 74 28 0 304 377 151 224 2.74e-28 112
MS.gene55314.t1 MTR_3g095080 50.000 78 33 3 153 228 168 241 5.66e-15 74.7
MS.gene55314.t1 MTR_5g091390 62.667 75 28 0 307 381 143 217 3.56e-28 113
MS.gene55314.t1 MTR_5g091390 58.333 60 24 1 153 211 157 216 1.10e-15 77.8
MS.gene55314.t1 MTR_8g092140 61.333 75 28 1 304 377 142 216 1.78e-26 107
MS.gene55314.t1 MTR_8g092140 51.316 76 31 3 153 226 160 231 3.66e-15 75.1
MS.gene55314.t1 MTR_5g043880 48.649 111 48 1 267 377 79 180 1.92e-26 108
MS.gene55314.t1 MTR_5g043880 58.621 58 23 1 153 209 124 181 1.33e-14 74.3
MS.gene55314.t1 MTR_7g079010 46.729 107 43 1 271 377 105 197 2.89e-26 105
MS.gene55314.t1 MTR_7g079010 51.948 77 30 3 148 222 136 207 2.01e-17 81.3
MS.gene55314.t1 MTR_7g028415 62.162 74 26 1 311 384 83 154 6.78e-26 103
MS.gene55314.t1 MTR_7g028415 56.140 57 24 1 153 208 93 149 3.05e-15 73.9
MS.gene55314.t1 MTR_7g028710 62.162 74 26 1 311 384 83 154 6.78e-26 103
MS.gene55314.t1 MTR_7g028710 56.140 57 24 1 153 208 93 149 3.05e-15 73.9
MS.gene55314.t1 MTR_8g096730 48.315 89 46 0 304 392 53 141 1.61e-25 101
MS.gene55314.t1 MTR_8g096730 44.304 79 42 2 153 230 70 147 7.04e-14 69.3
MS.gene55314.t1 MTR_3g104750 55.405 74 33 0 304 377 87 160 1.42e-24 99.8
MS.gene55314.t1 MTR_3g104750 50.877 57 27 1 153 208 104 160 1.14e-11 63.2
MS.gene55314.t1 MTR_8g092010 56.164 73 32 0 308 380 95 167 4.44e-24 99.0
MS.gene55314.t1 MTR_8g092010 53.333 60 27 1 153 211 108 167 8.23e-13 67.0
MS.gene55314.t1 MTR_6g086555 57.333 75 31 1 307 380 192 266 1.59e-23 102
MS.gene55314.t1 MTR_6g086555 39.216 102 56 4 118 217 175 272 9.85e-14 73.2
MS.gene55314.t1 MTR_3g095040 52.000 75 36 0 307 381 104 178 1.60e-23 98.2
MS.gene55314.t1 MTR_3g095040 53.333 60 27 1 153 211 118 177 8.03e-14 70.5
MS.gene55314.t1 MTR_4g122530 55.405 74 33 0 308 381 195 268 2.52e-23 101
MS.gene55314.t1 MTR_4g122530 61.667 60 22 1 153 211 208 267 5.99e-16 79.7
MS.gene55314.t1 MTR_1g015140 54.286 70 32 0 308 377 89 158 1.38e-22 94.4
MS.gene55314.t1 MTR_1g015140 54.386 57 25 1 153 208 102 158 6.27e-13 67.0
MS.gene55314.t1 MTR_3g053330 48.780 82 41 1 300 380 230 311 1.44e-22 100
MS.gene55314.t1 MTR_3g053330 36.029 136 77 5 96 223 190 323 2.99e-14 74.7
MS.gene55314.t1 MTR_1g078260 59.155 71 28 1 308 377 234 304 3.43e-22 99.0
MS.gene55314.t1 MTR_1g078260 45.455 77 39 3 153 227 247 322 1.48e-11 66.6
MS.gene55314.t1 MTR_7g110720 52.564 78 36 1 308 384 176 253 1.17e-21 96.7
MS.gene55314.t1 MTR_7g110720 51.667 60 27 2 154 211 190 249 4.30e-12 67.8
MS.gene55314.t1 MTR_7g110720 52.564 78 36 1 308 384 203 280 1.23e-21 97.1
MS.gene55314.t1 MTR_7g110720 51.667 60 27 2 154 211 217 276 4.31e-12 68.2
MS.gene55314.t1 MTR_4g132430 47.619 84 43 1 300 382 106 189 1.24e-21 95.9
MS.gene55314.t1 MTR_4g132430 49.180 61 29 2 153 211 127 187 4.94e-12 67.4
MS.gene55314.t1 MTR_2g023930 45.455 88 47 1 294 380 278 365 1.27e-21 97.8
MS.gene55314.t1 MTR_2g023930 51.667 60 27 2 154 211 306 365 2.26e-12 69.3
MS.gene55314.t1 MTR_4g049790 49.383 81 40 1 303 382 294 374 2.30e-21 97.1
MS.gene55314.t1 MTR_4g049790 36.458 96 59 2 154 247 313 408 2.88e-11 65.9
MS.gene55314.t1 MTR_4g094412 48.315 89 41 2 298 381 207 295 3.47e-21 95.9
MS.gene55314.t1 MTR_4g094412 53.226 62 25 3 153 211 234 294 3.12e-13 71.6
MS.gene55314.t1 MTR_4g094412 48.315 89 41 2 298 381 216 304 3.63e-21 95.9
MS.gene55314.t1 MTR_4g094412 53.226 62 25 3 153 211 243 303 3.36e-13 71.6
MS.gene55314.t1 MTR_2g088000 46.067 89 47 1 295 382 323 411 3.79e-21 96.3
MS.gene55314.t1 MTR_2g088000 49.180 61 29 2 153 211 349 409 2.20e-11 66.2
MS.gene55314.t1 MTR_4g107970 52.703 74 34 1 308 380 165 238 3.81e-21 96.3
MS.gene55314.t1 MTR_4g107970 51.471 68 28 4 148 211 172 238 1.52e-13 72.8
MS.gene55314.t1 MTR_4g132430 47.619 84 43 1 300 382 240 323 4.47e-21 95.9
MS.gene55314.t1 MTR_4g132430 49.180 61 29 2 153 211 261 321 9.28e-12 67.0
MS.gene55314.t1 MTR_4g107970 52.703 74 34 1 308 380 242 315 4.68e-21 96.3
MS.gene55314.t1 MTR_4g107970 51.471 68 28 4 148 211 249 315 1.78e-13 72.8
MS.gene55314.t1 MTR_7g009730 39.496 119 70 2 260 377 159 276 1.03e-20 95.1
MS.gene55314.t1 MTR_7g009730 54.098 61 24 3 153 210 219 278 2.82e-12 68.9
MS.gene55314.t1 MTR_1g009613 55.556 81 32 2 303 382 247 324 1.29e-20 92.8
MS.gene55314.t1 MTR_1g009613 50.725 69 31 3 144 210 254 321 1.12e-12 69.3
MS.gene55314.t1 MTR_7g062220 62.712 59 22 0 319 377 122 180 2.81e-20 91.7
MS.gene55314.t1 MTR_7g062220 44.444 99 49 3 115 208 83 180 7.13e-14 72.8
MS.gene55314.t1 MTR_2g105060 56.250 64 27 1 319 381 92 155 4.59e-20 89.4
MS.gene55314.t1 MTR_2g105060 51.667 60 27 2 154 211 95 154 1.97e-12 67.0
MS.gene55314.t1 MTR_2g045360 46.237 93 46 2 308 399 198 287 6.34e-20 92.0
MS.gene55314.t1 MTR_2g045360 50.000 60 28 2 154 211 212 271 1.15e-12 69.7
MS.gene55314.t1 MTR_2g105060 56.250 64 27 1 319 381 167 230 7.36e-20 90.1
MS.gene55314.t1 MTR_2g105060 51.667 60 27 2 154 211 170 229 2.94e-12 67.8
MS.gene55314.t1 MTR_4g049760 42.593 108 54 3 279 381 247 351 1.18e-19 91.7
MS.gene55314.t1 MTR_5g074200 59.375 64 26 0 153 216 220 283 1.19e-19 89.7
MS.gene55314.t1 MTR_5g074200 53.226 62 28 1 321 382 220 280 9.76e-15 75.5
MS.gene55314.t1 MTR_3g106060 36.054 147 62 6 255 377 57 195 2.29e-19 88.6
MS.gene55314.t1 MTR_3g106060 45.333 75 39 2 136 208 121 195 1.30e-13 71.6
MS.gene55314.t1 MTR_5g016610 50.685 73 35 1 318 389 196 268 7.10e-19 86.7
MS.gene55314.t1 MTR_5g016610 51.562 64 28 3 149 210 196 258 1.04e-12 68.6
MS.gene55314.t1 MTR_4g094908 56.061 66 28 1 318 382 263 328 2.45e-18 86.3
MS.gene55314.t1 MTR_4g094908 54.688 64 26 3 149 210 263 325 5.38e-14 73.2
MS.gene55314.t1 MTR_4g127040 45.745 94 39 3 285 377 220 302 2.77e-18 85.5
MS.gene55314.t1 MTR_4g127040 47.761 67 32 3 144 208 237 302 1.32e-11 65.9
MS.gene55314.t1 MTR_1g013760 49.315 73 34 2 308 377 125 197 3.09e-18 85.1
MS.gene55314.t1 MTR_1g013760 52.632 57 25 2 154 208 141 197 3.10e-13 70.1
MS.gene55314.t1 MTR_2g016770 33.117 154 87 6 125 270 4 149 6.99e-18 82.4
MS.gene55314.t1 MTR_2g016770 43.478 92 50 2 322 412 36 126 1.16e-17 82.0
MS.gene55314.t1 MTR_2g016770 36.800 125 66 5 151 270 25 141 8.61e-18 82.0
MS.gene55314.t1 MTR_2g016770 43.478 92 50 2 322 412 28 118 1.29e-17 81.6
MS.gene55314.t1 MTR_4g007060 53.968 63 28 1 319 380 126 188 1.10e-17 83.2
MS.gene55314.t1 MTR_4g007060 53.333 60 26 2 154 211 129 188 1.04e-13 71.6
MS.gene55314.t1 MTR_8g087000 51.515 66 31 1 322 386 78 143 1.37e-17 82.4
MS.gene55314.t1 MTR_8g087000 49.206 63 30 2 151 211 75 137 4.45e-13 69.3
MS.gene55314.t1 MTR_8g087000 51.515 66 31 1 322 386 77 142 1.53e-17 82.0
MS.gene55314.t1 MTR_8g087000 49.206 63 30 2 151 211 74 136 5.45e-13 68.9
MS.gene55314.t1 MTR_4g007060 53.968 63 28 1 319 380 160 222 1.70e-17 83.2
MS.gene55314.t1 MTR_4g007060 53.333 60 26 2 154 211 163 222 1.46e-13 71.6
MS.gene55314.t1 MTR_7g109600 50.000 70 34 1 322 390 54 123 2.90e-17 81.6
MS.gene55314.t1 MTR_7g109600 47.826 69 32 3 154 220 54 120 3.72e-11 63.9
MS.gene55314.t1 MTR_4g047580 38.889 90 54 1 294 382 254 343 9.08e-17 82.8
MS.gene55314.t1 MTR_2g024350 52.113 71 33 1 316 385 3 73 1.29e-16 79.0
MS.gene55314.t1 MTR_2g024350 50.725 69 32 2 149 215 4 72 5.06e-14 71.6
MS.gene55314.t1 MTR_1g070455 52.113 71 32 2 318 386 290 360 1.30e-16 81.3
MS.gene55314.t1 MTR_1g070455 54.839 62 25 3 149 208 290 350 3.29e-12 67.8
MS.gene55314.t1 MTR_7g079040 43.000 100 54 3 285 383 120 217 1.36e-16 80.9
MS.gene55314.t1 MTR_6g046600 62.963 54 20 0 163 216 12 65 2.42e-16 75.5
MS.gene55314.t1 MTR_2g032030 46.341 82 40 2 322 402 268 346 2.77e-16 80.9
MS.gene55314.t1 MTR_2g032030 46.341 82 40 2 322 402 268 346 3.16e-16 80.9
MS.gene55314.t1 MTR_2g083870 49.231 65 32 1 322 385 81 145 6.45e-16 77.8
MS.gene55314.t1 MTR_2g083870 49.231 65 31 2 151 213 78 142 1.54e-13 70.9
MS.gene55314.t1 MTR_1g013790 47.619 63 32 1 319 380 99 161 7.06e-16 77.4
MS.gene55314.t1 MTR_1g013790 34.483 116 69 3 154 262 102 217 1.38e-13 70.9
MS.gene55314.t1 MTR_8g028565 32.836 134 84 4 276 408 112 240 8.21e-16 78.6
MS.gene55314.t1 MTR_8g098945 49.231 65 32 1 320 383 128 192 1.30e-15 77.0
MS.gene55314.t1 MTR_8g098945 45.833 72 35 3 148 217 124 193 3.04e-12 67.0
MS.gene55314.t1 MTR_1g099600 44.156 77 41 2 308 383 173 248 1.33e-15 77.8
MS.gene55314.t1 MTR_1g099600 40.260 77 44 2 137 211 169 245 1.27e-11 65.9
MS.gene55314.t1 MTR_2g024380 49.351 77 38 1 310 385 240 316 1.64e-15 78.6
MS.gene55314.t1 MTR_2g024380 50.725 69 32 2 149 215 247 315 3.55e-13 71.6
MS.gene55314.t1 MTR_3g108960 43.243 74 41 1 306 378 299 372 1.50e-14 75.5
MS.gene55314.t1 MTR_3g108960 47.761 67 32 3 144 208 306 371 3.92e-11 65.1
MS.gene55314.t1 MTR_0117s0040 42.045 88 44 3 318 404 71 152 1.87e-14 73.2
MS.gene55314.t1 MTR_0117s0040 37.391 115 64 4 97 209 24 132 1.70e-11 64.7
MS.gene55314.t1 MTR_8g067650 33.846 130 68 3 275 386 276 405 2.08e-14 75.5
MS.gene55314.t1 MTR_8g067650 44.444 81 43 2 139 217 325 405 4.18e-13 71.6
MS.gene55314.t1 MTR_8g067635 33.846 130 68 3 275 386 286 415 3.89e-14 74.7
MS.gene55314.t1 MTR_8g067635 47.887 71 35 2 149 217 345 415 3.72e-12 68.6
MS.gene55314.t1 MTR_2g075750 30.872 149 94 5 294 434 1 148 9.04e-14 69.7
MS.gene55314.t1 MTR_8g069935 47.297 74 37 2 149 220 327 400 1.62e-13 72.4
MS.gene55314.t1 MTR_8g069935 44.776 67 36 1 321 386 331 397 2.04e-13 72.4
MS.gene55314.t1 MTR_5g067680 47.059 68 32 2 143 206 192 259 2.94e-13 71.2
MS.gene55314.t1 MTR_5g067680 46.552 58 28 1 321 375 202 259 7.93e-11 63.5
MS.gene55314.t1 MTR_2g075610 36.792 106 49 3 319 411 27 127 6.53e-13 67.4
MS.gene55314.t1 MTR_5g044695 45.098 51 28 0 298 348 54 104 1.15e-12 64.7
MS.gene55314.t1 MTR_6g053200 41.176 68 39 1 319 385 328 395 2.15e-12 69.3
MS.gene55314.t1 MTR_3g090860 47.692 65 30 2 146 206 126 190 4.16e-12 67.4
MS.gene55314.t1 MTR_3g090860 39.560 91 49 3 320 407 132 219 6.73e-12 67.0
MS.gene55314.t1 MTR_8g099350 51.724 58 25 1 321 375 132 189 4.34e-12 67.8
MS.gene55314.t1 MTR_8g099350 37.273 110 38 4 128 206 80 189 9.80e-12 66.6
MS.gene55314.t1 MTR_1g077760 58.140 43 18 0 299 341 92 134 8.50e-12 62.8
MS.gene55314.t1 MTR_2g075680 48.333 60 28 1 319 375 146 205 2.94e-11 64.7
MS.gene55314.t1 MTR_6g038890 42.593 54 31 0 295 348 162 215 4.06e-11 62.8
MS.gene55314.t1 MTR_8g027860 43.836 73 32 3 152 215 135 207 5.62e-11 63.9
MS.gene55314.t1 MTR_2g075700 48.333 60 28 1 319 375 142 201 8.50e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55314.t1 AT1G13960 49.333 525 154 17 9 434 3 514 6.40e-133 392
MS.gene55314.t1 AT2G03340 53.431 408 118 10 72 434 133 513 4.47e-129 382
MS.gene55314.t1 AT2G03340 55.385 65 23 3 7 67 4 66 2.02e-11 66.2
MS.gene55314.t1 AT1G13960 57.487 374 110 12 97 434 1 361 1.50e-120 355
MS.gene55314.t1 AT3G01080 43.633 479 167 17 23 434 18 460 5.04e-94 291
MS.gene55314.t1 AT3G01080 44.619 446 172 15 23 434 18 422 4.79e-91 282
MS.gene55314.t1 AT5G56270 50.538 279 92 4 151 383 271 549 5.66e-79 258
MS.gene55314.t1 AT2G38470 50.168 297 112 8 119 396 156 435 5.75e-79 254
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 34 270 1.53e-76 243
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 187 264 3.92e-15 77.0
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 34 270 1.53e-76 243
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 187 264 3.92e-15 77.0
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 34 270 1.53e-76 243
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 187 264 3.92e-15 77.0
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 34 270 1.53e-76 243
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 187 264 3.92e-15 77.0
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 138 374 7.44e-76 244
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 291 368 5.67e-15 77.0
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 170 406 9.26e-76 245
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 323 400 5.12e-15 77.4
MS.gene55314.t1 AT4G26640 52.439 246 97 4 152 386 210 446 2.62e-75 245
MS.gene55314.t1 AT4G26640 47.436 78 40 1 135 211 363 440 5.59e-15 77.4
MS.gene55314.t1 AT4G26440 48.214 280 113 6 145 395 170 446 5.11e-75 245
MS.gene55314.t1 AT5G07100 47.809 251 77 4 135 383 5 203 3.06e-70 221
MS.gene55314.t1 AT5G07100 37.815 119 73 1 98 215 86 204 1.08e-17 82.0
MS.gene55314.t1 AT5G07100 48.571 70 36 0 321 390 24 93 6.10e-15 73.9
MS.gene55314.t1 AT5G07100 47.809 251 77 4 135 383 5 203 3.06e-70 221
MS.gene55314.t1 AT5G07100 37.815 119 73 1 98 215 86 204 1.08e-17 82.0
MS.gene55314.t1 AT5G07100 48.571 70 36 0 321 390 24 93 6.10e-15 73.9
MS.gene55314.t1 AT5G07100 47.809 251 77 4 135 383 5 203 3.06e-70 221
MS.gene55314.t1 AT5G07100 37.815 119 73 1 98 215 86 204 1.08e-17 82.0
MS.gene55314.t1 AT5G07100 48.571 70 36 0 321 390 24 93 6.10e-15 73.9
MS.gene55314.t1 AT5G07100 47.809 251 77 4 135 383 5 203 3.06e-70 221
MS.gene55314.t1 AT5G07100 37.815 119 73 1 98 215 86 204 1.08e-17 82.0
MS.gene55314.t1 AT5G07100 48.571 70 36 0 321 390 24 93 6.10e-15 73.9
MS.gene55314.t1 AT5G07100 47.876 259 80 6 127 383 91 296 1.15e-69 223
MS.gene55314.t1 AT5G07100 37.815 119 73 1 98 215 179 297 7.05e-17 81.6
MS.gene55314.t1 AT5G07100 40.000 95 46 1 307 390 92 186 2.16e-15 77.0
MS.gene55314.t1 AT2G37260 44.755 286 105 8 149 400 81 347 8.48e-65 212
MS.gene55314.t1 AT2G37260 44.755 286 105 8 149 400 79 345 8.92e-65 212
MS.gene55314.t1 AT2G37260 44.755 286 105 8 149 400 161 427 5.16e-64 212
MS.gene55314.t1 AT2G30250 44.706 255 127 4 132 382 145 389 8.93e-61 202
MS.gene55314.t1 AT2G04880 43.580 257 113 8 149 387 107 349 3.09e-59 201
MS.gene55314.t1 AT2G04880 44.444 99 50 2 152 247 282 378 1.15e-19 91.3
MS.gene55314.t1 AT2G04880 41.176 272 122 7 149 387 107 373 2.79e-58 199
MS.gene55314.t1 AT2G04880 44.444 99 50 2 152 247 306 402 1.16e-19 91.7
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.01e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.74e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.01e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.74e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.02e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.46e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.02e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.46e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.05e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.55e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.06e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 9.63e-12 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.14e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 1.03e-11 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.22e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 1.07e-11 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.24e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 1.06e-11 67.8
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 439 661 1.27e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 467 526 1.31e-11 67.4
MS.gene55314.t1 AT4G12020 48.333 240 102 5 107 341 372 594 1.53e-55 199
MS.gene55314.t1 AT4G12020 49.180 61 30 1 320 380 400 459 1.17e-11 67.8
MS.gene55314.t1 AT4G30935 42.017 238 123 6 151 383 166 393 2.15e-48 172
MS.gene55314.t1 AT4G30935 56.250 64 27 1 154 216 332 395 1.20e-17 85.5
MS.gene55314.t1 AT3G01080 40.945 254 86 11 23 216 18 267 1.62e-37 139
MS.gene55314.t1 AT3G01080 58.333 60 24 1 321 380 205 263 1.50e-15 77.8
MS.gene55314.t1 AT4G18170 68.000 75 24 0 306 380 157 231 8.61e-31 121
MS.gene55314.t1 AT4G18170 58.333 60 24 1 153 211 172 231 7.83e-16 78.6
MS.gene55314.t1 AT1G29860 65.789 76 26 0 306 381 121 196 1.68e-30 119
MS.gene55314.t1 AT1G29860 58.333 60 24 1 153 211 136 195 1.07e-15 77.4
MS.gene55314.t1 AT5G46350 62.338 77 29 0 307 383 169 245 6.16e-29 116
MS.gene55314.t1 AT5G46350 54.545 66 28 2 153 217 183 247 7.12e-15 75.9
MS.gene55314.t1 AT2G44745 59.036 83 33 1 304 386 128 209 1.51e-28 112
MS.gene55314.t1 AT2G44745 57.971 69 25 3 153 219 145 211 1.10e-16 79.3
MS.gene55314.t1 AT2G47260 64.000 75 27 0 306 380 159 233 1.86e-28 115
MS.gene55314.t1 AT2G47260 56.667 60 25 1 153 211 174 233 6.97e-15 75.9
MS.gene55314.t1 AT4G39410 64.865 74 26 0 304 377 206 279 2.05e-28 114
MS.gene55314.t1 AT4G39410 58.621 58 21 2 153 208 223 279 2.37e-13 70.9
MS.gene55314.t1 AT5G13080 54.878 82 37 0 308 389 54 135 2.23e-27 106
MS.gene55314.t1 AT5G13080 54.386 57 25 1 153 208 67 123 4.75e-15 72.4
MS.gene55314.t1 AT1G69310 47.826 115 53 1 263 377 96 203 3.24e-27 110
MS.gene55314.t1 AT1G69310 60.345 58 22 1 153 209 147 204 1.28e-15 77.4
MS.gene55314.t1 AT1G69310 47.826 115 53 1 263 377 96 203 3.24e-27 110
MS.gene55314.t1 AT1G69310 60.345 58 22 1 153 209 147 204 1.28e-15 77.4
MS.gene55314.t1 AT1G69310 47.826 115 53 1 263 377 96 203 3.24e-27 110
MS.gene55314.t1 AT1G69310 60.345 58 22 1 153 209 147 204 1.28e-15 77.4
MS.gene55314.t1 AT1G64000 38.650 163 91 3 220 377 12 170 6.90e-27 107
MS.gene55314.t1 AT1G64000 48.000 75 36 2 136 208 97 170 3.32e-15 74.3
MS.gene55314.t1 AT5G41570 63.380 71 26 0 307 377 84 154 8.04e-27 106
MS.gene55314.t1 AT5G41570 54.839 62 25 2 149 208 94 154 3.64e-14 70.9
MS.gene55314.t1 AT5G49520 62.667 75 28 0 306 380 206 280 8.27e-27 111
MS.gene55314.t1 AT5G49520 58.333 60 24 1 153 211 221 280 5.37e-15 76.6
MS.gene55314.t1 AT3G01970 57.317 82 35 0 308 389 52 133 1.47e-26 104
MS.gene55314.t1 AT3G01970 52.381 63 29 1 153 214 65 127 3.72e-15 72.8
MS.gene55314.t1 AT1G55600 57.303 89 38 0 294 382 280 368 2.42e-25 108
MS.gene55314.t1 AT1G55600 56.923 65 24 3 149 211 304 366 1.19e-13 73.2
MS.gene55314.t1 AT5G26170 58.571 70 29 0 308 377 100 169 3.11e-25 102
MS.gene55314.t1 AT5G26170 54.098 61 27 1 153 212 113 173 4.01e-14 70.9
MS.gene55314.t1 AT2G46130 60.563 71 28 0 307 377 16 86 3.95e-25 99.4
MS.gene55314.t1 AT2G46130 59.649 57 22 1 153 208 30 86 1.96e-15 72.4
MS.gene55314.t1 AT3G62340 62.162 74 28 0 307 380 104 177 3.98e-25 104
MS.gene55314.t1 AT3G62340 60.000 60 23 1 153 211 118 177 2.94e-15 76.3
MS.gene55314.t1 AT4G04450 45.370 108 58 1 300 406 177 284 2.58e-24 104
MS.gene55314.t1 AT4G04450 51.667 60 27 2 154 211 199 258 1.37e-12 69.7
MS.gene55314.t1 AT4G04450 45.370 108 58 1 300 406 271 378 8.77e-24 103
MS.gene55314.t1 AT4G04450 51.667 60 27 2 154 211 293 352 2.01e-12 69.3
MS.gene55314.t1 AT2G21900 50.000 76 35 1 310 382 95 170 5.05e-23 96.7
MS.gene55314.t1 AT2G21900 41.053 95 55 1 144 237 100 194 1.56e-14 72.4
MS.gene55314.t1 AT1G69310 45.217 115 52 2 263 377 96 199 2.44e-22 96.7
MS.gene55314.t1 AT1G69310 55.172 58 21 2 153 209 147 200 4.94e-11 63.5
MS.gene55314.t1 AT5G64810 51.351 74 36 0 305 378 94 167 5.39e-22 93.6
MS.gene55314.t1 AT5G64810 50.000 60 25 2 153 209 110 167 1.01e-11 64.3
MS.gene55314.t1 AT1G62300 49.398 83 41 1 299 380 290 372 7.45e-22 98.6
MS.gene55314.t1 AT1G62300 51.667 60 27 2 154 211 313 372 1.31e-12 70.1
MS.gene55314.t1 AT4G22070 46.591 88 46 1 294 380 270 357 8.60e-22 98.2
MS.gene55314.t1 AT4G22070 51.667 60 27 2 154 211 298 357 1.82e-12 69.7
MS.gene55314.t1 AT4G22070 46.591 88 46 1 294 380 270 357 8.60e-22 98.2
MS.gene55314.t1 AT4G22070 51.667 60 27 2 154 211 298 357 1.82e-12 69.7
MS.gene55314.t1 AT4G22070 46.591 88 46 1 294 380 270 357 8.60e-22 98.2
MS.gene55314.t1 AT4G22070 51.667 60 27 2 154 211 298 357 1.82e-12 69.7
MS.gene55314.t1 AT4G22070 46.591 88 46 1 294 380 270 357 8.60e-22 98.2
MS.gene55314.t1 AT4G22070 51.667 60 27 2 154 211 298 357 1.82e-12 69.7
MS.gene55314.t1 AT5G15130 47.561 82 42 1 304 384 168 249 6.99e-21 95.5
MS.gene55314.t1 AT5G15130 51.471 68 28 4 148 211 179 245 5.01e-13 71.2
MS.gene55314.t1 AT5G15130 47.561 82 42 1 304 384 210 291 7.37e-21 95.5
MS.gene55314.t1 AT5G15130 53.226 62 25 3 153 211 227 287 5.69e-13 71.2
MS.gene55314.t1 AT1G68150 51.282 78 37 1 308 384 222 299 1.79e-20 92.8
MS.gene55314.t1 AT1G68150 54.839 62 24 3 153 211 235 295 1.11e-13 72.8
MS.gene55314.t1 AT2G46130 56.338 71 27 1 307 377 16 82 2.17e-20 86.3
MS.gene55314.t1 AT2G46130 54.386 57 21 2 153 208 30 82 7.95e-11 59.3
MS.gene55314.t1 AT1G18860 51.282 78 37 1 304 380 222 299 2.58e-20 93.6
MS.gene55314.t1 AT1G18860 51.613 62 26 3 153 211 239 299 1.10e-11 67.0
MS.gene55314.t1 AT2G25000 42.222 90 51 1 294 382 76 165 3.61e-20 89.4
MS.gene55314.t1 AT2G25000 34.711 121 63 6 154 262 104 220 3.06e-11 63.5
MS.gene55314.t1 AT2G25000 42.222 90 51 1 294 382 76 165 3.61e-20 89.4
MS.gene55314.t1 AT2G25000 34.711 121 63 6 154 262 104 220 3.06e-11 63.5
MS.gene55314.t1 AT2G25000 42.222 90 51 1 294 382 98 187 6.27e-20 89.4
MS.gene55314.t1 AT2G25000 34.711 121 63 6 154 262 126 242 5.86e-11 63.2
MS.gene55314.t1 AT2G25000 42.222 90 51 1 294 382 119 208 9.91e-20 89.0
MS.gene55314.t1 AT2G25000 34.711 121 63 6 154 262 147 263 7.79e-11 63.2
MS.gene55314.t1 AT4G31550 51.190 84 37 2 303 385 230 310 6.26e-19 87.8
MS.gene55314.t1 AT4G31550 54.839 62 25 3 149 208 242 302 2.53e-12 68.2
MS.gene55314.t1 AT4G31550 51.190 84 37 2 303 385 231 311 6.28e-19 87.8
MS.gene55314.t1 AT4G31550 54.839 62 25 3 149 208 243 303 2.58e-12 68.2
MS.gene55314.t1 AT1G80840 53.125 64 29 1 319 381 144 207 7.06e-19 87.0
MS.gene55314.t1 AT1G80840 50.820 61 28 2 154 212 147 207 2.02e-13 71.2
MS.gene55314.t1 AT5G43290 44.792 96 41 1 294 377 75 170 7.16e-19 86.7
MS.gene55314.t1 AT5G43290 52.564 78 26 3 152 218 113 190 6.61e-15 75.1
MS.gene55314.t1 AT4G23550 40.206 97 57 1 288 383 107 203 7.37e-19 87.4
MS.gene55314.t1 AT4G23550 50.000 60 28 2 154 211 141 200 1.75e-11 65.5
MS.gene55314.t1 AT4G31800 52.113 71 32 2 314 382 103 173 7.64e-19 85.9
MS.gene55314.t1 AT4G31800 49.180 61 29 2 154 212 112 172 1.40e-12 67.8
MS.gene55314.t1 AT4G31800 52.113 71 32 2 314 382 168 238 1.35e-18 86.7
MS.gene55314.t1 AT4G31800 49.180 61 29 2 154 212 177 237 2.08e-12 68.2
MS.gene55314.t1 AT4G01720 50.000 74 36 1 308 380 226 299 2.52e-18 87.4
MS.gene55314.t1 AT4G01720 50.000 62 29 2 152 211 238 299 8.31e-12 67.4
MS.gene55314.t1 AT2G23320 57.143 63 26 1 318 379 237 299 8.70e-18 84.3
MS.gene55314.t1 AT2G23320 53.125 64 27 3 149 210 237 299 1.03e-12 69.3
MS.gene55314.t1 AT2G30590 59.016 61 24 1 318 377 310 370 9.37e-18 85.1
MS.gene55314.t1 AT2G30590 53.731 67 27 4 149 212 310 375 4.87e-13 70.9
MS.gene55314.t1 AT4G24240 54.688 64 28 1 317 379 277 340 5.44e-17 82.4
MS.gene55314.t1 AT4G24240 50.725 69 31 3 144 210 273 340 1.25e-13 72.4
MS.gene55314.t1 AT2G24570 59.016 61 24 1 318 377 240 300 8.72e-17 81.3
MS.gene55314.t1 AT2G24570 53.968 63 26 3 149 209 240 301 1.46e-12 68.9
MS.gene55314.t1 AT4G01250 55.556 63 27 1 319 380 126 188 9.95e-17 80.9
MS.gene55314.t1 AT4G01250 33.333 126 75 4 154 277 129 247 1.51e-11 65.5
MS.gene55314.t1 AT5G28650 50.000 72 35 1 318 388 259 330 1.02e-16 81.3
MS.gene55314.t1 AT5G28650 53.226 62 26 3 149 208 259 319 1.61e-11 65.9
MS.gene55314.t1 AT3G04670 50.000 72 35 1 318 388 259 330 1.68e-16 80.5
MS.gene55314.t1 AT3G04670 51.613 62 27 3 149 208 259 319 1.55e-11 65.9
MS.gene55314.t1 AT5G52830 45.556 90 46 3 308 396 153 240 2.69e-16 80.1
MS.gene55314.t1 AT5G52830 48.485 66 30 3 154 217 166 229 3.49e-11 64.7
MS.gene55314.t1 AT1G30650 39.604 101 42 2 322 403 218 318 3.07e-16 80.9
MS.gene55314.t1 AT1G30650 39.362 94 46 3 120 211 193 277 2.02e-11 65.9
MS.gene55314.t1 AT1G29280 53.333 60 27 1 322 380 75 134 5.32e-16 78.2
MS.gene55314.t1 AT1G29280 49.206 63 30 2 151 211 72 134 1.99e-12 67.4
MS.gene55314.t1 AT3G58710 33.898 118 68 2 281 388 21 138 6.46e-16 78.2
MS.gene55314.t1 AT3G58710 44.286 70 37 2 151 218 68 137 5.81e-12 66.2
MS.gene55314.t1 AT3G58710 47.059 68 35 1 322 388 72 139 6.80e-16 77.8
MS.gene55314.t1 AT3G58710 44.286 70 37 2 151 218 69 138 5.71e-12 66.2
MS.gene55314.t1 AT2G34830 50.794 63 30 1 322 383 216 278 6.86e-16 79.7
MS.gene55314.t1 AT2G34830 38.298 94 47 3 120 211 191 275 6.67e-11 64.3
MS.gene55314.t1 AT2G34830 50.794 63 30 1 322 383 225 287 6.89e-16 79.7
MS.gene55314.t1 AT2G34830 38.298 94 47 3 120 211 200 284 6.71e-11 64.3
MS.gene55314.t1 AT1G69810 43.333 90 47 3 308 395 132 219 8.59e-16 78.6
MS.gene55314.t1 AT1G69810 46.970 66 32 2 149 211 141 206 8.77e-12 66.6
MS.gene55314.t1 AT1G69810 43.333 90 47 3 308 395 190 277 1.15e-15 79.0
MS.gene55314.t1 AT1G69810 46.970 66 32 2 149 211 199 264 9.02e-12 67.0
MS.gene55314.t1 AT5G45050 50.794 63 30 1 322 383 1042 1104 7.72e-15 77.4
MS.gene55314.t1 AT5G45050 50.794 63 30 1 322 383 1181 1243 7.94e-15 77.4
MS.gene55314.t1 AT5G45050 50.794 63 30 1 322 383 1153 1215 8.26e-15 77.4
MS.gene55314.t1 AT2G40740 46.053 76 34 3 138 206 155 230 3.68e-14 73.2
MS.gene55314.t1 AT2G40740 46.053 76 34 3 138 206 164 239 4.97e-14 72.8
MS.gene55314.t1 AT1G66560 51.724 58 25 1 321 375 103 160 3.75e-13 69.7
MS.gene55314.t1 AT4G11070 35.938 128 62 6 116 229 73 194 1.49e-12 68.2
MS.gene55314.t1 AT2G46400 36.607 112 59 3 267 375 59 161 1.50e-12 68.6
MS.gene55314.t1 AT4G11070 35.938 128 62 6 116 229 105 226 2.28e-12 68.2
MS.gene55314.t1 AT3G56400 39.024 82 43 2 313 387 112 193 3.44e-12 67.4
MS.gene55314.t1 AT4G23810 46.032 63 30 2 148 206 153 215 9.11e-12 66.2
MS.gene55314.t1 AT5G24110 46.032 63 30 2 148 206 108 170 2.92e-11 64.7
MS.gene55314.t1 AT5G45260 40.404 99 51 4 122 216 1179 1273 3.64e-11 65.9
MS.gene55314.t1 AT5G45260 32.258 155 84 6 233 383 1136 1273 8.14e-11 65.1

Find 108 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGTTGTTATGACTGCTTT+AGG 0.286428 5.2:+32415790 None:intergenic
CCTGTTGCCTGACTAGATTC+AGG 0.298032 5.2:+32416622 None:intergenic
GGTTATAGATGGCGAAAATA+TGG 0.304499 5.2:-32416169 MS.gene55314:CDS
GGCTACAATTGGAGGAAATA+TGG 0.308838 5.2:-32416907 MS.gene55314:CDS
TATGGACAGAAAGTTGTTAA+AGG 0.320018 5.2:-32416151 MS.gene55314:CDS
TAACTGTCCTGTCAAGAAAA+AGG 0.329083 5.2:-32416827 MS.gene55314:CDS
AACAACCTGTTGCTCGTCTA+AGG 0.334127 5.2:-32415621 MS.gene55314:CDS
AAGGTTGAGCGTTCGCTTGC+TGG 0.338256 5.2:-32416808 MS.gene55314:CDS
CCACCGGTGGTTACCGTTGC+CGG 0.343626 5.2:+32419019 None:intergenic
GGCGGTTGGCGGTGGTGAAG+GGG 0.368812 5.2:-32419200 MS.gene55314:CDS
ATATCCGCAATTATTTATAA+AGG 0.368886 5.2:-32416781 MS.gene55314:CDS
GCGGCGGTTGGCGGTGGTGA+AGG 0.372834 5.2:-32419202 MS.gene55314:CDS
CTTCAAATGAAAATTCAAAT+AGG 0.383970 5.2:-32416705 MS.gene55314:CDS
ACCGGTGGGTTTGATTCATC+TGG 0.396023 5.2:-32419004 MS.gene55314:CDS
TAACTGTGAAGCATTATTGT+TGG 0.399399 5.2:+32415711 None:intergenic
CGGCGGTTGGCGGTGGTGAA+GGG 0.405393 5.2:-32419201 MS.gene55314:CDS
CTCTCTAACTTATTTGCTGA+TGG 0.408888 5.2:-32419091 MS.gene55314:CDS
ATTTCTGAGAAGCCTAGTTT+TGG 0.416394 5.2:-32415673 MS.gene55314:CDS
GAGGAAATATGGACAGAAAC+AGG 0.418222 5.2:-32416896 MS.gene55314:CDS
CATATGATGTAGGTATCCTT+TGG 0.418514 5.2:-32417105 MS.gene55314:intron
TTTGATCGCTTATTAGGATT+CGG 0.420162 5.2:+32416739 None:intergenic
CGCCGGTTCCATGGTGTCTC+CGG 0.421394 5.2:-32419038 MS.gene55314:CDS
TTCAGCCTTAGACGAGCAAC+AGG 0.424679 5.2:+32415616 None:intergenic
CGTACGTGGCGGAAGAGTTA+AGG 0.426728 5.2:+32419159 None:intergenic
GCAACAGGTGAACATCTATC+TGG 0.429027 5.2:-32416607 MS.gene55314:CDS
AAGTTAGAGAGAAGAGTCAT+AGG 0.429317 5.2:+32419103 None:intergenic
TTCAGAGAGAGGAGCCTGAT+TGG 0.429923 5.2:+32416978 None:intergenic
TTGGTAGCATTGGTATTGGC+GGG 0.437748 5.2:-32415654 MS.gene55314:CDS
GCGGTTGGCGGTGGTGAAGG+GGG 0.440847 5.2:-32419199 MS.gene55314:CDS
TCAGCTTCTCGCCGGTTCCA+TGG 0.442799 5.2:-32419047 MS.gene55314:CDS
AAAACTAGGCTTCTCAGAAA+TGG 0.445800 5.2:+32415675 None:intergenic
TGCCGGAGACACCATGGAAC+CGG 0.455597 5.2:+32419036 None:intergenic
TTAAAGGAAATCCTTATCCT+AGG 0.456816 5.2:-32416135 MS.gene55314:intron
CTTCTTCCTTCCACGGTGGT+CGG 0.470680 5.2:+32419233 None:intergenic
TCTTCTTCTTCTTCCTTCCA+CGG 0.471119 5.2:+32419226 None:intergenic
TATACCAACATCCACCAATC+AGG 0.478269 5.2:-32416992 MS.gene55314:CDS
TCCTTCTCTCAGCTTCTCGC+CGG 0.478730 5.2:-32419055 MS.gene55314:CDS
GAAGAAGAAGCGGCGGTTGG+CGG 0.479683 5.2:-32419211 MS.gene55314:CDS
GAAGAAGCGGCGGTTGGCGG+TGG 0.481467 5.2:-32419208 MS.gene55314:CDS
GAAGCATATCACCTAGGATA+AGG 0.482882 5.2:+32416124 None:intergenic
GAAGTTGATCTCTTAGATGA+TGG 0.483367 5.2:-32416190 MS.gene55314:CDS
CCGATGATGGCTACAATTGG+AGG 0.485258 5.2:-32416915 MS.gene55314:CDS
CTGTTGCCTGACTAGATTCA+GGG 0.486306 5.2:+32416623 None:intergenic
TTCAAACTCAATGTCTAAGA+TGG 0.487664 5.2:-32416647 MS.gene55314:CDS
ACAGTACTATGTGAAGTTGT+TGG 0.490613 5.2:+32416247 None:intergenic
CTGCCGATGATGGCTACAAT+TGG 0.491271 5.2:-32416918 MS.gene55314:CDS
GATGGACCCTGAATCTAGTC+AGG 0.493707 5.2:-32416629 MS.gene55314:CDS
TGGTATAGACGATAAATGTT+CGG 0.494103 5.2:+32417008 None:intergenic
TCTTAGATGATGGTTATAGA+TGG 0.497586 5.2:-32416180 MS.gene55314:CDS
GTCGATAAGCCTGCCGATGA+TGG 0.498396 5.2:-32416928 MS.gene55314:CDS
GAATTGAGCCCGACTCCAAA+AGG 0.499145 5.2:-32416531 MS.gene55314:CDS
CCTGAATCTAGTCAGGCAAC+AGG 0.502478 5.2:-32416622 MS.gene55314:CDS
TTCCATGGTGTCTCCGGCAA+CGG 0.512324 5.2:-32419032 MS.gene55314:CDS
GCAGTCATAACAACATATGA+AGG 0.514254 5.2:-32415784 MS.gene55314:CDS
TGGCTATTAGTCTTAGCTGC+TGG 0.515585 5.2:+32415742 None:intergenic
TTGGTTAAGTATATTAGTGT+TGG 0.517197 5.2:+32417032 None:intergenic
GAGAGAAGAGTCATAGGACC+AGG 0.520057 5.2:+32419109 None:intergenic
ATACCAATGCTACCAAAACT+AGG 0.520202 5.2:+32415661 None:intergenic
GTGCACTTGTAATAACTTCG+AGG 0.523109 5.2:+32416856 None:intergenic
AGAGAGAGGAGCCTGATTGG+TGG 0.525780 5.2:+32416981 None:intergenic
CCTCCAATTGTAGCCATCAT+CGG 0.527967 5.2:+32416915 None:intergenic
TTTGGTAGCATTGGTATTGG+CGG 0.529217 5.2:-32415655 MS.gene55314:CDS
CTTAACTCTTCCGCCACGTA+CGG 0.541928 5.2:-32419158 MS.gene55314:CDS
TCTTAGCTGCTGGAACATCA+TGG 0.545160 5.2:+32415752 None:intergenic
AATGGACCGACCACCGTGGA+AGG 0.549974 5.2:-32419239 MS.gene55314:CDS
CAATTGTAGCCATCATCGGC+AGG 0.552856 5.2:+32416919 None:intergenic
GGTAGCATTGGTATTGGCGG+GGG 0.556601 5.2:-32415652 MS.gene55314:CDS
TTATTTGCTGATGGAGATGA+CGG 0.559343 5.2:-32419082 MS.gene55314:CDS
CCGGCAACGGTAACCACCGG+TGG 0.560156 5.2:-32419019 MS.gene55314:CDS
AATGAAAATTCAAATAGGCA+AGG 0.563913 5.2:-32416700 MS.gene55314:CDS
ATCTAAGAGATCAACTTCAC+TGG 0.563948 5.2:+32416195 None:intergenic
ATGAAAATTCAAATAGGCAA+GGG 0.564284 5.2:-32416699 MS.gene55314:CDS
TAGACGATAAATGTTCGGCT+TGG 0.566985 5.2:+32417013 None:intergenic
TTATCGACATTCAACGAAGA+AGG 0.568098 5.2:+32416943 None:intergenic
GTTAAGGTGGGTCGCTGTGG+TGG 0.571117 5.2:+32419175 None:intergenic
CTCTCCTTTATAAATAATTG+CGG 0.571939 5.2:+32416777 None:intergenic
GAAGAAGAAGAAGCGGCGGT+TGG 0.584493 5.2:-32419214 MS.gene55314:CDS
ACCGGCGAGAAGCTGAGAGA+AGG 0.597313 5.2:+32419054 None:intergenic
ACGAGTGATAGTGAGGATGT+AGG 0.598153 5.2:-32416583 MS.gene55314:CDS
GTGAAAAGTGCGTCCGTACG+TGG 0.598428 5.2:+32419145 None:intergenic
ACGTGGCGGAAGAGTTAAGG+TGG 0.606182 5.2:+32419162 None:intergenic
TGTTGCTCGTCTAAGGCTGA+AGG 0.606467 5.2:-32415614 MS.gene55314:CDS
AGGACCAGGGCTAAAACCAC+CGG 0.613111 5.2:+32419123 None:intergenic
TGGTAGCATTGGTATTGGCG+GGG 0.613610 5.2:-32415653 MS.gene55314:CDS
TATGGACAGAAACAGGTGAA+AGG 0.615984 5.2:-32416889 MS.gene55314:CDS
AGAGTTAAGGTGGGTCGCTG+TGG 0.617498 5.2:+32419172 None:intergenic
ATCTGGAACGAGTGATAGTG+AGG 0.619905 5.2:-32416590 MS.gene55314:CDS
GGAGCCTGATTGGTGGATGT+TGG 0.622588 5.2:+32416988 None:intergenic
CATTATTGTTGGCAATAGTG+TGG 0.625832 5.2:+32415722 None:intergenic
TGCTTTCGAACGTTACAACT+CGG 0.628437 5.2:+32415835 None:intergenic
TACCGTTGCCGGAGACACCA+TGG 0.630265 5.2:+32419030 None:intergenic
ACCAGATGAATCAAACCCAC+CGG 0.631315 5.2:+32419003 None:intergenic
TCTCCGGCAACGGTAACCAC+CGG 0.638389 5.2:-32419022 MS.gene55314:CDS
ACAGCAGCAACCACTGACAC+AGG 0.639404 5.2:-32417076 MS.gene55314:CDS
GTGCTGATTCAACTTATCAA+CGG 0.645507 5.2:-32416675 MS.gene55314:CDS
GCAACCACTGACACAGGTCT+CGG 0.647175 5.2:-32417070 MS.gene55314:CDS
CGGCAACGGTAACCACCGGT+GGG 0.654733 5.2:-32419018 MS.gene55314:CDS
AGGTGATCGTGAAACAGAAG+TGG 0.657969 5.2:-32416563 MS.gene55314:CDS
TTGCTGCTGTGTCATTCCAA+AGG 0.666392 5.2:+32417089 None:intergenic
AGAGAAGAGTCATAGGACCA+GGG 0.673747 5.2:+32419110 None:intergenic
TGAGCCGAGACCTGTGTCAG+TGG 0.676749 5.2:+32417066 None:intergenic
TCTTCTTCTTCCTTCCACGG+TGG 0.679810 5.2:+32419229 None:intergenic
AAAAGTGCGTCCGTACGTGG+CGG 0.684333 5.2:+32419148 None:intergenic
TTGAGCCCGACTCCAAAAGG+AGG 0.687140 5.2:-32416528 MS.gene55314:intron
CGTGGCGGAAGAGTTAAGGT+GGG 0.691075 5.2:+32419163 None:intergenic
ACACAGGTCTCGGCTCACGA+AGG 0.691681 5.2:-32417060 MS.gene55314:CDS
AGATGAATCAAACCCACCGG+TGG 0.700312 5.2:+32419006 None:intergenic
TGGAAATGGACCGACCACCG+TGG 0.747666 5.2:-32419243 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATGTTAAATAATGTA+AGG + chr5.2:32417555-32417574 None:intergenic 10.0%
!!! ACTTTTTAAAAGAATTTAAA+TGG - chr5.2:32416102-32416121 MS.gene55314:intron 10.0%
!!! GATTTTTTTTAGAAAATATA+TGG + chr5.2:32416299-32416318 None:intergenic 10.0%
!! ATAGTAATATTTCCAAATTT+GGG + chr5.2:32416746-32416765 None:intergenic 15.0%
!! AAAAAAGAGATTATCTAAAG+TGG + chr5.2:32416874-32416893 None:intergenic 20.0%
!! AACAAATTACATAGAAATGA+AGG + chr5.2:32416216-32416235 None:intergenic 20.0%
!! ACAAATTACATAGAAATGAA+GGG + chr5.2:32416215-32416234 None:intergenic 20.0%
!! AGAATTTAAATGGTATGTAT+AGG - chr5.2:32416112-32416131 MS.gene55314:intron 20.0%
!! ATATCCGCAATTATTTATAA+AGG - chr5.2:32418054-32418073 MS.gene55314:intron 20.0%
!! CTTCAAATGAAAATTCAAAT+AGG - chr5.2:32418130-32418149 MS.gene55314:intron 20.0%
!! GATAGTAATATTTCCAAATT+TGG + chr5.2:32416747-32416766 None:intergenic 20.0%
!! GTTTGTATATAAACAATGTA+CGG + chr5.2:32417203-32417222 None:intergenic 20.0%
!! TATATGTCAAAGTTGTAAAT+AGG - chr5.2:32418355-32418374 MS.gene55314:intron 20.0%
!! TTTAATATAAGATGCTTTCT+TGG - chr5.2:32415982-32416001 MS.gene55314:intron 20.0%
!! TTTACAACTTTGACATATAT+CGG + chr5.2:32418354-32418373 None:intergenic 20.0%
!!! CAGTATTTACAACATTTTTA+TGG - chr5.2:32418471-32418490 MS.gene55314:intron 20.0%
!!! GATTTTGCTTATAGTTTTTA+CGG - chr5.2:32418875-32418894 MS.gene55314:intron 20.0%
!!! TGTTTTCTTACATAATGTTT+AGG - chr5.2:32418956-32418975 MS.gene55314:intron 20.0%
!!! TTAAAATATTCCTACACTTT+TGG - chr5.2:32416711-32416730 MS.gene55314:CDS 20.0%
!!! TTGTATTTAGTTCATTAATC+AGG + chr5.2:32418427-32418446 None:intergenic 20.0%
! AATGAAAATTCAAATAGGCA+AGG - chr5.2:32418135-32418154 MS.gene55314:intron 25.0%
! ACAATAACAAGACAACATAA+AGG + chr5.2:32418530-32418549 None:intergenic 25.0%
! ACGAAATTCTTATAAGCTAT+AGG + chr5.2:32417067-32417086 None:intergenic 25.0%
! ACTTAACATGATTATACTTG+AGG - chr5.2:32417621-32417640 MS.gene55314:intron 25.0%
! ACTTTACTTAGCATAATGTA+AGG + chr5.2:32417461-32417480 None:intergenic 25.0%
! ATAAATGAGACACACTATTA+GGG + chr5.2:32418909-32418928 None:intergenic 25.0%
! ATGAAAATTCAAATAGGCAA+GGG - chr5.2:32418136-32418155 MS.gene55314:intron 25.0%
! CTCTCCTTTATAAATAATTG+CGG + chr5.2:32418061-32418080 None:intergenic 25.0%
! CTTTACTTAGCATAATGTAA+GGG + chr5.2:32417460-32417479 None:intergenic 25.0%
! GTTAGAAACTAATTCAAACT+AGG - chr5.2:32417121-32417140 MS.gene55314:intron 25.0%
! TAAATAAGCCAAATTTAACG+AGG + chr5.2:32418788-32418807 None:intergenic 25.0%
! TCAACACTTATATATAACAG+TGG + chr5.2:32415945-32415964 None:intergenic 25.0%
! TGGATAAATTTACCCAAATT+TGG - chr5.2:32416731-32416750 MS.gene55314:CDS 25.0%
! TTAAAAGGATCAAACACAAT+TGG + chr5.2:32416059-32416078 None:intergenic 25.0%
! TTCATGATAAAGGGAAAAAA+AGG + chr5.2:32417271-32417290 None:intergenic 25.0%
! TTGGTTAAGTATATTAGTGT+TGG + chr5.2:32417806-32417825 None:intergenic 25.0%
!! GTAAATTTATCCAAAAGTGT+AGG + chr5.2:32416724-32416743 None:intergenic 25.0%
!!! ATATTCGTTTTCCTTGTTTT+TGG + chr5.2:32416423-32416442 None:intergenic 25.0%
!!! GATATTGTTTTATTGACATG+TGG + chr5.2:32416591-32416610 None:intergenic 25.0%
AATCGATGAACATGAAAAGT+TGG + chr5.2:32418855-32418874 None:intergenic 30.0%
ACAATATCCGAAATACAACT+TGG - chr5.2:32416603-32416622 MS.gene55314:CDS 30.0%
ACTATGAACTTGTACTTACA+TGG + chr5.2:32416353-32416372 None:intergenic 30.0%
ACTCTTAAACACAACATACT+AGG + chr5.2:32416139-32416158 None:intergenic 30.0%
ATAAACAAAGATTTCACCTG+AGG + chr5.2:32415870-32415889 None:intergenic 30.0%
ATTCACGAATAGTTCACAAT+AGG + chr5.2:32418757-32418776 None:intergenic 30.0%
ATTTGATATAGTGATCCAGT+AGG - chr5.2:32416386-32416405 MS.gene55314:intron 30.0%
CAATAGGTGAAATTAAAGTG+TGG + chr5.2:32418741-32418760 None:intergenic 30.0%
CTATGAACTTGTACTTACAT+GGG + chr5.2:32416352-32416371 None:intergenic 30.0%
GATAAATGAGACACACTATT+AGG + chr5.2:32418910-32418929 None:intergenic 30.0%
GTGTCATATATGCTCTATTT+AGG - chr5.2:32417434-32417453 MS.gene55314:intron 30.0%
GTTGACAAGATTATCTAAAG+TGG + chr5.2:32416914-32416933 None:intergenic 30.0%
TAAGTAAAGTCTCAAACTCT+TGG - chr5.2:32417471-32417490 MS.gene55314:intron 30.0%
TATGGACAGAAAGTTGTTAA+AGG - chr5.2:32418684-32418703 MS.gene55314:intron 30.0%
TATGTTGTTATGACTGCTTT+AGG + chr5.2:32419048-32419067 None:intergenic 30.0%
TCTATATATCCTCACTATCT+TGG + chr5.2:32417664-32417683 None:intergenic 30.0%
TGCAGAAAAGTTTGTATTTG+AGG + chr5.2:32417240-32417259 None:intergenic 30.0%
TGGTATAGACGATAAATGTT+CGG + chr5.2:32417830-32417849 None:intergenic 30.0%
TTAAAGGAAATCCTTATCCT+AGG - chr5.2:32418700-32418719 MS.gene55314:intron 30.0%
TTCAAACTCAATGTCTAAGA+TGG - chr5.2:32418188-32418207 MS.gene55314:intron 30.0%
TTTGATCGCTTATTAGGATT+CGG + chr5.2:32418099-32418118 None:intergenic 30.0%
! ATAAAGGGAAAAAAAGGCAT+TGG + chr5.2:32417265-32417284 None:intergenic 30.0%
! TAACTGTGAAGCATTATTGT+TGG + chr5.2:32419127-32419146 None:intergenic 30.0%
! TACAAAAACTTACCTCCTTT+TGG + chr5.2:32418322-32418341 None:intergenic 30.0%
! TCAATAGTCCTCTCTTTTAA+GGG - chr5.2:32417172-32417191 MS.gene55314:intron 30.0%
! TCTTAGATGATGGTTATAGA+TGG - chr5.2:32418655-32418674 MS.gene55314:intron 30.0%
! TCTTGGTGCATTATATTATG+TGG - chr5.2:32415999-32416018 MS.gene55314:intron 30.0%
! TTGATTTTGCGATCCAAAAA+AGG - chr5.2:32416160-32416179 MS.gene55314:CDS 30.0%
! TTGTATTTGAGGCATTATCA+AGG + chr5.2:32417229-32417248 None:intergenic 30.0%
! TTTTATTGACATGTGGTCTA+TGG + chr5.2:32416584-32416603 None:intergenic 30.0%
! TTTTCCCTTTATCATGAAAC+AGG - chr5.2:32417273-32417292 MS.gene55314:intron 30.0%
!! AACATTGATTCTAGTGTGTT+TGG + chr5.2:32416781-32416800 None:intergenic 30.0%
!! TGCATAGTTCTAAACTATGT+AGG + chr5.2:32417333-32417352 None:intergenic 30.0%
AAAACTAGGCTTCTCAGAAA+TGG + chr5.2:32419163-32419182 None:intergenic 35.0%
AAGTTAGAGAGAAGAGTCAT+AGG + chr5.2:32415735-32415754 None:intergenic 35.0%
AATTCCTGAACCAAACTTTG+CGG + chr5.2:32416693-32416712 None:intergenic 35.0%
ACAAGACAACATAAAGGCAA+AGG + chr5.2:32418524-32418543 None:intergenic 35.0%
ACAGTACTATGTGAAGTTGT+TGG + chr5.2:32418591-32418610 None:intergenic 35.0%
ACATAGAAATGAAGGGCAAA+CGG + chr5.2:32416208-32416227 None:intergenic 35.0%
ACTAATTTCACCGCAAAGTT+TGG - chr5.2:32416680-32416699 MS.gene55314:CDS 35.0%
AGTCAGTTTGACCAAAAACA+AGG - chr5.2:32416409-32416428 MS.gene55314:intron 35.0%
AGTTCATTAATCAGGTGCAT+TGG + chr5.2:32418419-32418438 None:intergenic 35.0%
ATACCAATGCTACCAAAACT+AGG + chr5.2:32419177-32419196 None:intergenic 35.0%
ATCTAAGAGATCAACTTCAC+TGG + chr5.2:32418643-32418662 None:intergenic 35.0%
CAAAGGATACCTACATCATA+TGG + chr5.2:32417732-32417751 None:intergenic 35.0%
CAATATCCACCATATGATGT+AGG - chr5.2:32417720-32417739 MS.gene55314:intron 35.0%
CACCTTTATGTAGAATTCCA+AGG + chr5.2:32416546-32416565 None:intergenic 35.0%
CATAAAGGCAAAGGATTACT+CGG + chr5.2:32418515-32418534 None:intergenic 35.0%
CATATGATGTAGGTATCCTT+TGG - chr5.2:32417730-32417749 MS.gene55314:intron 35.0%
CATTATTGTTGGCAATAGTG+TGG + chr5.2:32419116-32419135 None:intergenic 35.0%
CTGGATCACTATATCAAATG+AGG + chr5.2:32416385-32416404 None:intergenic 35.0%
GACCTTGGAATTCTACATAA+AGG - chr5.2:32416541-32416560 MS.gene55314:CDS 35.0%
GCAGTCATAACAACATATGA+AGG - chr5.2:32419051-32419070 MS.gene55314:CDS 35.0%
GCCTTTACCAAGTTGTATTT+CGG + chr5.2:32416613-32416632 None:intergenic 35.0%
GGCTAAGACAATGATTTGAT+TGG + chr5.2:32416507-32416526 None:intergenic 35.0%
GGTTATAGATGGCGAAAATA+TGG - chr5.2:32418666-32418685 MS.gene55314:intron 35.0%
GTTCATTAATCAGGTGCATT+GGG + chr5.2:32418418-32418437 None:intergenic 35.0%
TAACTGTCCTGTCAAGAAAA+AGG - chr5.2:32418008-32418027 MS.gene55314:intron 35.0%
TCCGAAATACAACTTGGTAA+AGG - chr5.2:32416609-32416628 MS.gene55314:CDS 35.0%
TGAACTATTCGTGAATGTTG+TGG - chr5.2:32418761-32418780 MS.gene55314:intron 35.0%
TGCGGTGAAATTAGTAAATG+TGG + chr5.2:32416675-32416694 None:intergenic 35.0%
TTACTACTTCCAAGATAGTG+AGG - chr5.2:32417652-32417671 MS.gene55314:intron 35.0%
TTACTGTGGGCAAAACATTT+GGG + chr5.2:32416837-32416856 None:intergenic 35.0%
TTATCGACATTCAACGAAGA+AGG + chr5.2:32417895-32417914 None:intergenic 35.0%
TTGATGCAGACTACTAATGA+TGG - chr5.2:32417514-32417533 MS.gene55314:intron 35.0%
TTGGTAAAGGCTCTTAAATC+TGG - chr5.2:32416622-32416641 MS.gene55314:CDS 35.0%
TTTACTGTGGGCAAAACATT+TGG + chr5.2:32416838-32416857 None:intergenic 35.0%
! CAATAGTCCTCTCTTTTAAG+GGG - chr5.2:32417173-32417192 MS.gene55314:intron 35.0%
! CTCTCTAACTTATTTGCTGA+TGG - chr5.2:32415744-32415763 MS.gene55314:CDS 35.0%
! GAAGTTGATCTCTTAGATGA+TGG - chr5.2:32418645-32418664 MS.gene55314:intron 35.0%
! GTCAATAGTCCTCTCTTTTA+AGG - chr5.2:32417171-32417190 MS.gene55314:intron 35.0%
! GTGTCTTTTGATCGCTTATT+AGG + chr5.2:32418105-32418124 None:intergenic 35.0%
! GTTCTAAACTATGTAGGCTA+CGG + chr5.2:32417327-32417346 None:intergenic 35.0%
! TTATTTGCTGATGGAGATGA+CGG - chr5.2:32415753-32415772 MS.gene55314:CDS 35.0%
! TTTTTCTTGACAGGACAGTT+AGG + chr5.2:32418009-32418028 None:intergenic 35.0%
!! AATAGTCCTCTCTTTTAAGG+GGG - chr5.2:32417174-32417193 MS.gene55314:intron 35.0%
!! ATTTCTGAGAAGCCTAGTTT+TGG - chr5.2:32419162-32419181 MS.gene55314:CDS 35.0%
!! GTAGTTTGCACGATGATTTT+AGG + chr5.2:32418621-32418640 None:intergenic 35.0%
!! GTGCTGATTCAACTTATCAA+CGG - chr5.2:32418160-32418179 MS.gene55314:intron 35.0%
!!! AGTTTTGGTAGCATTGGTAT+TGG - chr5.2:32419177-32419196 MS.gene55314:CDS 35.0%
!!! TCCTTTTAACTTTCTAGCGA+CGG - chr5.2:32416070-32416089 MS.gene55314:intron 35.0%
ACAGAGACACGTCTAATTTC+AGG + chr5.2:32417367-32417386 None:intergenic 40.0%
AGGATACCTACATCATATGG+TGG + chr5.2:32417729-32417748 None:intergenic 40.0%
ATAGAAATGAAGGGCAAACG+GGG + chr5.2:32416206-32416225 None:intergenic 40.0%
CATAGAAATGAAGGGCAAAC+GGG + chr5.2:32416207-32416226 None:intergenic 40.0%
CCTGCCTGTTTCATGATAAA+GGG + chr5.2:32417280-32417299 None:intergenic 40.0%
GAAGCATATCACCTAGGATA+AGG + chr5.2:32418714-32418733 None:intergenic 40.0%
GAAGGAAGAAGAAGAAGAAG+CGG - chr5.2:32415614-32415633 MS.gene55314:CDS 40.0%
GAGGAAATATGGACAGAAAC+AGG - chr5.2:32417939-32417958 MS.gene55314:intron 40.0%
GGCTACAATTGGAGGAAATA+TGG - chr5.2:32417928-32417947 MS.gene55314:intron 40.0%
GTGCACTTGTAATAACTTCG+AGG + chr5.2:32417982-32418001 None:intergenic 40.0%
GTTGTGGACCTCGTTAAATT+TGG - chr5.2:32418777-32418796 MS.gene55314:intron 40.0%
TAGACGATAAATGTTCGGCT+TGG + chr5.2:32417825-32417844 None:intergenic 40.0%
TATACCAACATCCACCAATC+AGG - chr5.2:32417843-32417862 MS.gene55314:intron 40.0%
TATCAAGACACCAATGCACT+TGG + chr5.2:32417392-32417411 None:intergenic 40.0%
TATGGACAGAAACAGGTGAA+AGG - chr5.2:32417946-32417965 MS.gene55314:intron 40.0%
TCCGTCGCTAGAAAGTTAAA+AGG + chr5.2:32416074-32416093 None:intergenic 40.0%
TCCTGCCTGTTTCATGATAA+AGG + chr5.2:32417281-32417300 None:intergenic 40.0%
TCTTCTTCTTCTTCCTTCCA+CGG + chr5.2:32415612-32415631 None:intergenic 40.0%
TGCTTTCGAACGTTACAACT+CGG + chr5.2:32419003-32419022 None:intergenic 40.0%
! AAGTGCATTGGTGTCTTGAT+AGG - chr5.2:32417391-32417410 MS.gene55314:intron 40.0%
! TGCAACTTTTGTTCAGAGAG+AGG + chr5.2:32417871-32417890 None:intergenic 40.0%
! TGGTTTCTTTTCACATCCTC+AGG - chr5.2:32415851-32415870 MS.gene55314:CDS 40.0%
!! TCATTGTCTTAGCCGTTTTG+AGG - chr5.2:32416513-32416532 MS.gene55314:intron 40.0%
!! TTTGGTAGCATTGGTATTGG+CGG - chr5.2:32419180-32419199 MS.gene55314:CDS 40.0%
!!! AACTTACCTCCTTTTGGAGT+CGG + chr5.2:32418316-32418335 None:intergenic 40.0%
!!! AAGCCTAGTTTTGGTAGCAT+TGG - chr5.2:32419171-32419190 MS.gene55314:CDS 40.0%
!!! TGCACTGCACTAACCTTTTT+TGG + chr5.2:32416176-32416195 None:intergenic 40.0%
!!! TTTTAACTTTCTAGCGACGG+AGG - chr5.2:32416073-32416092 MS.gene55314:intron 40.0%
AACAACCTGTTGCTCGTCTA+AGG - chr5.2:32419214-32419233 MS.gene55314:CDS 45.0%
ACCAGATGAATCAAACCCAC+CGG + chr5.2:32415835-32415854 None:intergenic 45.0%
ACCTCTTCCAAGCTTTACTG+TGG + chr5.2:32416851-32416870 None:intergenic 45.0%
AGAGAAGAGTCATAGGACCA+GGG + chr5.2:32415728-32415747 None:intergenic 45.0%
AGGTGATCGTGAAACAGAAG+TGG - chr5.2:32418272-32418291 MS.gene55314:intron 45.0%
CAAGGTCCTCTACCTCAAAA+CGG + chr5.2:32416528-32416547 None:intergenic 45.0%
CCCTTTATCATGAAACAGGC+AGG - chr5.2:32417277-32417296 MS.gene55314:intron 45.0%
CCTCCAATTGTAGCCATCAT+CGG + chr5.2:32417923-32417942 None:intergenic 45.0%
CCTCTTCCAAGCTTTACTGT+GGG + chr5.2:32416850-32416869 None:intergenic 45.0%
CTGTTGCCTGACTAGATTCA+GGG + chr5.2:32418215-32418234 None:intergenic 45.0%
GCAACAGGTGAACATCTATC+TGG - chr5.2:32418228-32418247 MS.gene55314:intron 45.0%
TCTTAGCTGCTGGAACATCA+TGG + chr5.2:32419086-32419105 None:intergenic 45.0%
TTGGTATGAGCCTACTGCAA+AGG + chr5.2:32416040-32416059 None:intergenic 45.0%
! ACGAGTGATAGTGAGGATGT+AGG - chr5.2:32418252-32418271 MS.gene55314:intron 45.0%
! ATCTGGAACGAGTGATAGTG+AGG - chr5.2:32418245-32418264 MS.gene55314:intron 45.0%
! CGCTCAACCTTTTTCTTGAC+AGG + chr5.2:32418018-32418037 None:intergenic 45.0%
! GGAAGAGAAGCATATCACCT+AGG + chr5.2:32418720-32418739 None:intergenic 45.0%
! GTTTTGCCCACAGTAAAGCT+TGG - chr5.2:32416841-32416860 MS.gene55314:CDS 45.0%
! TTCACCGCAAAGTTTGGTTC+AGG - chr5.2:32416686-32416705 MS.gene55314:CDS 45.0%
! TTGCTGCTGTGTCATTCCAA+AGG + chr5.2:32417749-32417768 None:intergenic 45.0%
! TTGGTCAAACTGACTCCTAC+TGG + chr5.2:32416404-32416423 None:intergenic 45.0%
!! TGGCTATTAGTCTTAGCTGC+TGG + chr5.2:32419096-32419115 None:intergenic 45.0%
!! TTGGTAGCATTGGTATTGGC+GGG - chr5.2:32419181-32419200 MS.gene55314:CDS 45.0%
!!! ACTTACCTCCTTTTGGAGTC+GGG + chr5.2:32418315-32418334 None:intergenic 45.0%
!!! TCTTAGCCGTTTTGAGGTAG+AGG - chr5.2:32416519-32416538 MS.gene55314:intron 45.0%
AGATGAATCAAACCCACCGG+TGG + chr5.2:32415832-32415851 None:intergenic 50.0%
CAATTGTAGCCATCATCGGC+AGG + chr5.2:32417919-32417938 None:intergenic 50.0%
CCCACAGTAAAGCTTGGAAG+AGG - chr5.2:32416847-32416866 MS.gene55314:CDS 50.0%
CCTGAATCTAGTCAGGCAAC+AGG - chr5.2:32418213-32418232 MS.gene55314:intron 50.0%
CCTGTTGCCTGACTAGATTC+AGG + chr5.2:32418216-32418235 None:intergenic 50.0%
CTTAACTCTTCCGCCACGTA+CGG - chr5.2:32415677-32415696 MS.gene55314:CDS 50.0%
GAATTGAGCCCGACTCCAAA+AGG - chr5.2:32418304-32418323 MS.gene55314:intron 50.0%
GAGAGAAGAGTCATAGGACC+AGG + chr5.2:32415729-32415748 None:intergenic 50.0%
GATGGACCCTGAATCTAGTC+AGG - chr5.2:32418206-32418225 MS.gene55314:intron 50.0%
GGAAGAAGAAGAAGAAGCGG+CGG - chr5.2:32415617-32415636 MS.gene55314:CDS 50.0%
GGGCAAAACATTTGGGTCTC+TGG + chr5.2:32416830-32416849 None:intergenic 50.0%
GTCTCTGTGTCCAAGTGCAT+TGG - chr5.2:32417379-32417398 MS.gene55314:intron 50.0%
TCTTCTTCTTCCTTCCACGG+TGG + chr5.2:32415609-32415628 None:intergenic 50.0%
TGTCTCGTGTCCTTTGCAGT+AGG - chr5.2:32416027-32416046 MS.gene55314:intron 50.0%
TTCAGAGAGAGGAGCCTGAT+TGG + chr5.2:32417860-32417879 None:intergenic 50.0%
TTCAGCCTTAGACGAGCAAC+AGG + chr5.2:32419222-32419241 None:intergenic 50.0%
! ACCGGTGGGTTTGATTCATC+TGG - chr5.2:32415831-32415850 MS.gene55314:CDS 50.0%
! CCGATGATGGCTACAATTGG+AGG - chr5.2:32417920-32417939 MS.gene55314:intron 50.0%
! CTGCCGATGATGGCTACAAT+TGG - chr5.2:32417917-32417936 MS.gene55314:intron 50.0%
! TGTTGCTCGTCTAAGGCTGA+AGG - chr5.2:32419221-32419240 MS.gene55314:CDS 50.0%
!! TGGTAGCATTGGTATTGGCG+GGG - chr5.2:32419182-32419201 MS.gene55314:CDS 50.0%
!!! CGTTTTGAGGTAGAGGACCT+TGG - chr5.2:32416526-32416545 MS.gene55314:intron 50.0%
AAGGTTGAGCGTTCGCTTGC+TGG - chr5.2:32418027-32418046 MS.gene55314:intron 55.0%
ACAGCAGCAACCACTGACAC+AGG - chr5.2:32417759-32417778 MS.gene55314:intron 55.0%
AGAGAGAGGAGCCTGATTGG+TGG + chr5.2:32417857-32417876 None:intergenic 55.0%
AGAGTTAAGGTGGGTCGCTG+TGG + chr5.2:32415666-32415685 None:intergenic 55.0%
AGGACCAGGGCTAAAACCAC+CGG + chr5.2:32415715-32415734 None:intergenic 55.0%
CGGTCACCCCCTTAAAAGAG+AGG + chr5.2:32417183-32417202 None:intergenic 55.0%
CTTCTTCCTTCCACGGTGGT+CGG + chr5.2:32415605-32415624 None:intergenic 55.0%
GAAGAAGAAGAAGCGGCGGT+TGG - chr5.2:32415621-32415640 MS.gene55314:CDS 55.0%
GCAACCACTGACACAGGTCT+CGG - chr5.2:32417765-32417784 MS.gene55314:intron 55.0%
GTCGATAAGCCTGCCGATGA+TGG - chr5.2:32417907-32417926 MS.gene55314:intron 55.0%
TCCTTCTCTCAGCTTCTCGC+CGG - chr5.2:32415780-32415799 MS.gene55314:CDS 55.0%
TTCCATGGTGTCTCCGGCAA+CGG - chr5.2:32415803-32415822 MS.gene55314:CDS 55.0%
TTGAGCCCGACTCCAAAAGG+AGG - chr5.2:32418307-32418326 MS.gene55314:intron 55.0%
! AAAAGTGCGTCCGTACGTGG+CGG + chr5.2:32415690-32415709 None:intergenic 55.0%
! ACGTGGCGGAAGAGTTAAGG+TGG + chr5.2:32415676-32415695 None:intergenic 55.0%
! CGTACGGACGCACTTTTCAC+CGG - chr5.2:32415693-32415712 MS.gene55314:CDS 55.0%
! CGTACGTGGCGGAAGAGTTA+AGG + chr5.2:32415679-32415698 None:intergenic 55.0%
! CGTGGCGGAAGAGTTAAGGT+GGG + chr5.2:32415675-32415694 None:intergenic 55.0%
! GGAGCCTGATTGGTGGATGT+TGG + chr5.2:32417850-32417869 None:intergenic 55.0%
! GTGAAAAGTGCGTCCGTACG+TGG + chr5.2:32415693-32415712 None:intergenic 55.0%
!! GGTAGCATTGGTATTGGCGG+GGG - chr5.2:32419183-32419202 MS.gene55314:CDS 55.0%
!!! TTCACCGGTGGTTTTAGCCC+TGG - chr5.2:32415708-32415727 MS.gene55314:CDS 55.0%
ACACAGGTCTCGGCTCACGA+AGG - chr5.2:32417775-32417794 MS.gene55314:intron 60.0%
ACCGGCGAGAAGCTGAGAGA+AGG + chr5.2:32415784-32415803 None:intergenic 60.0%
GAAGAAGAAGCGGCGGTTGG+CGG - chr5.2:32415624-32415643 MS.gene55314:CDS 60.0%
GTTAAGGTGGGTCGCTGTGG+TGG + chr5.2:32415663-32415682 None:intergenic 60.0%
TACCGTTGCCGGAGACACCA+TGG + chr5.2:32415808-32415827 None:intergenic 60.0%
TCTCCGGCAACGGTAACCAC+CGG - chr5.2:32415813-32415832 MS.gene55314:CDS 60.0%
TGAGCCGAGACCTGTGTCAG+TGG + chr5.2:32417772-32417791 None:intergenic 60.0%
TGCCGGAGACACCATGGAAC+CGG + chr5.2:32415802-32415821 None:intergenic 60.0%
! ACGGACGCACTTTTCACCGG+TGG - chr5.2:32415696-32415715 MS.gene55314:CDS 60.0%
!! TCAGCTTCTCGCCGGTTCCA+TGG - chr5.2:32415788-32415807 MS.gene55314:CDS 60.0%
CCACCGGTGGTTACCGTTGC+CGG + chr5.2:32415819-32415838 None:intergenic 65.0%
CGGCAACGGTAACCACCGGT+GGG - chr5.2:32415817-32415836 MS.gene55314:CDS 65.0%
!! CGCCGGTTCCATGGTGTCTC+CGG - chr5.2:32415797-32415816 MS.gene55314:CDS 65.0%
CCGGCAACGGTAACCACCGG+TGG - chr5.2:32415816-32415835 MS.gene55314:CDS 70.0%
CGGCGGTTGGCGGTGGTGAA+GGG - chr5.2:32415634-32415653 MS.gene55314:CDS 70.0%
GAAGAAGCGGCGGTTGGCGG+TGG - chr5.2:32415627-32415646 MS.gene55314:CDS 70.0%
GCGGTTGGCGGTGGTGAAGG+GGG - chr5.2:32415636-32415655 MS.gene55314:CDS 70.0%
GGCGGTTGGCGGTGGTGAAG+GGG - chr5.2:32415635-32415654 MS.gene55314:CDS 70.0%
GCGGCGGTTGGCGGTGGTGA+AGG - chr5.2:32415633-32415652 MS.gene55314:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 32415597 32419260 32415597 ID=MS.gene55314
chr5.2 mRNA 32415597 32419260 32415597 ID=MS.gene55314.t1;Parent=MS.gene55314
chr5.2 exon 32418985 32419260 32418985 ID=MS.gene55314.t1.exon1;Parent=MS.gene55314.t1
chr5.2 CDS 32418985 32419260 32418985 ID=cds.MS.gene55314.t1;Parent=MS.gene55314.t1
chr5.2 exon 32416529 32417115 32416529 ID=MS.gene55314.t1.exon2;Parent=MS.gene55314.t1
chr5.2 CDS 32416529 32417115 32416529 ID=cds.MS.gene55314.t1;Parent=MS.gene55314.t1
chr5.2 exon 32416136 32416294 32416136 ID=MS.gene55314.t1.exon3;Parent=MS.gene55314.t1
chr5.2 CDS 32416136 32416294 32416136 ID=cds.MS.gene55314.t1;Parent=MS.gene55314.t1
chr5.2 exon 32415597 32415879 32415597 ID=MS.gene55314.t1.exon4;Parent=MS.gene55314.t1
chr5.2 CDS 32415597 32415879 32415597 ID=cds.MS.gene55314.t1;Parent=MS.gene55314.t1
Gene Sequence

>MS.gene55314

ATGGACCGACCACCGTGGAAGGAAGAAGAAGAAGAAGCGGCGGTTGGCGGTGGTGAAGGGGGACCACCACAGCGACCCACCTTAACTCTTCCGCCACGTACGGACGCACTTTTCACCGGTGGTTTTAGCCCTGGTCCTATGACTCTTCTCTCTAACTTATTTGCTGATGGAGATGACGGCAAGTCCTTCTCTCAGCTTCTCGCCGGTTCCATGGTGTCTCCGGCAACGGTAACCACCGGTGGGTTTGATTCATCTGGTTTCTTTTCACATCCTCAGGTGAAATCTTTGTTTATGTATATAGCTTATGCTTATTGAATTGCACTTATATGATATGATATGATATTACCACTGTTATATATAAGTGTTGATGTATAAAGTTAATTTATTTAATATAAGATGCTTTCTTGGTGCATTATATTATGTGGAGAAGTGTCTCGTGTCCTTTGCAGTAGGCTCATACCAATTGTGTTTGATCCTTTTAACTTTCTAGCGACGGAGGTTGTTGACTTTTTAAAAGAATTTAAATGGTATGTATAGGACCTAGTATGTTGTGTTTAAGAGTATTGATTTTGCGATCCAAAAAAGGTTAGTGCAGTGCAAATTGTTCCCCGTTTGCCCTTCATTTCTATGTAATTTGTTTTTTTTTTTTTTTCAAATTCAATTTAAGACTATACACTTCAAAATTAAGCAAGAGATATACCATATATTTTCTAAAAAAAATCGTTCAAAATTCTAATAACGATCAGTGTCGTCCCATGTAAGTACAAGTTCATAGTATTACTTGTCCTCATTTGATATAGTGATCCAGTAGGAGTCAGTTTGACCAAAAACAAGGAAAACGAATATTAGTGCTCAAAACTCAACTTATATACTTGTTTTTTTCTTATATATTTTTGTTCAATCAACACCAATCAAATCATTGTCTTAGCCGTTTTGAGGTAGAGGACCTTGGAATTCTACATAAAGGTGATAAGCATTGATTCACCATAGACCACATGTCAATAAAACAATATCCGAAATACAACTTGGTAAAGGCTCTTAAATCTGGATGCTAGATTTGCAAGAGTGTGATCAACCACATTTACTAATTTCACCGCAAAGTTTGGTTCAGGAATTAAAATATTCCTACACTTTTGGATAAATTTACCCAAATTTGGAAATATTACTATCATTTTTCATTACCAAACACACTAGAATCAATGTTTTTGCATGTGTTTCAAAAGCAACACACCAGAGACCCAAATGTTTTGCCCACAGTAAAGCTTGGAAGAGGTCCACTTTAGATAATCTCTTTTTTTTTTTTTTTTTGACAAGCCACTTTAGATAATCTTGTCAACAAAGATAAATGTAAACTGCAATATGAAAAGAATCTTGAAATAACTGAGTTTTTTAAACAATTTCACATATAAGTTGACAAAATTGCTTCTACATCTTCATTTTTTCAAAGCTCTTTTATTTAATTTGTTACCTATAGCTTATAAGAATTTCGTTTTGAGTGAAAATCATTGATTATTTTAATCATAAGTTAGAAACTAATTCAAACTAGGCTTCACTCAAGTGAGTATCATCTAAAAGTCAATAGTCCTCTCTTTTAAGGGGGTGACCGTACATTGTTTATATACAAACTTTCCTTGATAATGCCTCAAATACAAACTTTTCTGCACTCCAATGCCTTTTTTTCCCTTTATCATGAAACAGGCAGGAAAATCTTTCAGTGAATCTTAGTACCGTAGCCTACATAGTTTAGAACTATGCAGCATGAACACTCCTGAAATTAGACGTGTCTCTGTGTCCAAGTGCATTGGTGTCTTGATAGGATAGATGTAAAAGAGTGAAAGTGTCATATATGCTCTATTTAGGCCCTTACATTATGCTAAGTAAAGTCTCAAACTCTTGGAGATTAACTACTAATTAATGTTGATGCAGACTACTAATGATGGTTATTCGAGTTTACTCCTTACATTATTTAACATATATTTTTACTGTGAAATTCAACTACGCAAAACAACTAATATATAGTTAATACTTAACATGATTATACTTGAGGATGTATAGTTACTACTTCCAAGATAGTGAGGATATATAGATTATAGAAAGCATAGTTATGAAATGAATTTGACACACAATATCCACCATATGATGTAGGTATCCTTTGGAATGACACAGCAGCAACCACTGACACAGGTCTCGGCTCACGAAGGACAATCCAACACTAATATACTTAACCAAGCCGAACATTTATCGTCTATACCAACATCCACCAATCAGGCTCCTCTCTCTGAACAAAAGTTGCAGCCTTCTTCGTTGAATGTCGATAAGCCTGCCGATGATGGCTACAATTGGAGGAAATATGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCGCTTGCTGGTCATATATCCGCAATTATTTATAAAGGAGAGCACAATCATCAACTTCCGAATCCTAATAAGCGATCAAAAGACACTGTAACTTCAAATGAAAATTCAAATAGGCAAGGGAGTGCTGATTCAACTTATCAACGGATGACTTCAAACTCAATGTCTAAGATGGACCCTGAATCTAGTCAGGCAACAGGTGAACATCTATCTGGAACGAGTGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGTGGATGAGAAAAGAATTGAGCCCGACTCCAAAAGGAGGTAAGTTTTTGTAAAGATATTTCCGATATATGTCAAAGTTGTAAATAGGATACAAACACTAATTCGTTTATCTAGACTTTTCTAAACCCAATGCACCTGATTAATGAACTAAATACAATTATTAAAAATAATTACAAAGATTCAGTATTTACAACATTTTTATGGTACATAAATTTGTTCATACCGAGTAATCCTTTGCCTTTATGTTGTCTTGTTATTGTTGTAATTCTGCAGACATACAGAAGTCACAGTCTCAAATCCAACAACTTCACATAGTACTGTCACAGAGCCTAAAATCATCGTGCAAACTACCAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTTAAAGGAAATCCTTATCCTAGGTGATATGCTTCTCTTCCACACTTTAATTTCACCTATTGTGAACTATTCGTGAATGTTGTGGACCTCGTTAAATTTGGCTTATTTAAACTTATCTAACATTTGCTTAGACATTTAATTTGACAATTGATTCCAACTTTTCATGTTCATCGATTGATTTTGCTTATAGTTTTTACGGAAATTTTTCCCTAATAGTGTGTCTCATTTATCTTTTCTTGTCTTGAAAAACTTATTAATGTTTTCTTACATAATGTTTAGGAGCTATTACAAATGTACAACACCGAGTTGTAACGTTCGAAAGCATGTAGAGAGAGCATCGACAGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAACCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCTTCACAGTTAAAATCGCAAAATACCATTTCTGAGAAGCCTAGTTTTGGTAGCATTGGTATTGGCGGGGGCAATGAGCAACAACCTGTTGCTCGTCTAAGGCTGAAGGAAGAGCAGATAACTTAA
Protein sequence

>MS.gene55314.t1

MDRPPWKEEEEEAAVGGGEGGPPQRPTLTLPPRTDALFTGGFSPGPMTLLSNLFADGDDGKSFSQLLAGSMVSPATVTTGGFDSSGFFSHPQVSFGMTQQQPLTQVSAHEGQSNTNILNQAEHLSSIPTSTNQAPLSEQKLQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLAGHISAIIYKGEHNHQLPNPNKRSKDTVTSNENSNRQGSADSTYQRMTSNSMSKMDPESSQATGEHLSGTSDSEDVGDRETEVDEKRIEPDSKRRHTEVTVSNPTTSHSTVTEPKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPSCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISEKPSFGSIGIGGGNEQQPVARLRLKEEQIT