AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55442

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55442.t1 MTR_0044s0180 73.892 812 197 4 1 811 1 798 0.0 1273
MS.gene55442.t1 MTR_6g022320 98.467 587 9 0 13 599 1 587 0.0 1218
MS.gene55442.t1 MTR_6g022320 91.736 242 20 0 587 828 731 972 2.88e-148 461
MS.gene55442.t1 MTR_6g022320 59.494 316 119 4 393 701 16 329 2.72e-118 382
MS.gene55442.t1 MTR_6g022320 69.014 213 60 2 28 238 381 589 3.70e-89 303
MS.gene55442.t1 MTR_6g022320 37.288 118 71 2 224 341 731 845 8.42e-16 82.4
MS.gene55442.t1 MTR_8g039290 23.793 290 180 12 376 642 46 317 1.51e-11 67.4
MS.gene55442.t1 MTR_8g039290 23.793 290 180 12 376 642 46 317 1.53e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55442.t1 AT3G01720 68.035 804 227 7 20 816 21 801 0.0 1157
MS.gene55442.t1 AT3G01720 57.447 329 135 3 378 701 14 342 5.20e-121 384

Find 200 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAAAACTGTATGGATTT+TGG 0.129221 6.2:+15731907 None:intergenic
AATTTCAAGTGCTTCATTTA+AGG 0.159066 6.2:+15728248 None:intergenic
AAAAGGTTGTGACAATATTT+TGG 0.175665 6.2:-15732886 MS.gene55442:CDS
CCAAGTTCCCAAGGTAAAAT+TGG 0.180353 6.2:+15733446 None:intergenic
GTAGCAGGATTCACATATTT+TGG 0.184669 6.2:+15731995 None:intergenic
TACCAAGTTCTTTCAGGTTT+TGG 0.193793 6.2:-15728023 MS.gene55442:CDS
ATCCGGTGGGTCTGGGAATT+TGG 0.206690 6.2:+15728341 None:intergenic
AATTACCAATCTCCTGTTAA+TGG 0.215038 6.2:+15731710 None:intergenic
AGGCCTGTTGCAGCATATTA+TGG 0.237439 6.2:-15733410 MS.gene55442:CDS
ATGAGATACCAAGTTCTTTC+AGG 0.238205 6.2:-15728029 MS.gene55442:CDS
TTGCATGCCAGCTACCTTAT+TGG 0.244694 6.2:-15730551 MS.gene55442:intron
ATCTTACCAATCACCAGTTT+TGG 0.252526 6.2:+15735657 None:intergenic
GCTGCAATGACGAGGATTTA+AGG 0.256840 6.2:-15731790 MS.gene55442:CDS
CGACAAAGTTGGCGGGCTTT+TGG 0.279044 6.2:-15732832 MS.gene55442:CDS
AACTCTTGATCAAGCTAATA+AGG 0.288432 6.2:-15728313 MS.gene55442:CDS
TTGGGTTGATGAATAGTTAT+AGG 0.296552 6.2:-15735798 MS.gene55442:CDS
AACATAACTGGTGACATATA+CGG 0.297840 6.2:-15732720 MS.gene55442:CDS
GAAGAGAAGAAGAATTATAA+AGG 0.299151 6.2:-15735727 MS.gene55442:CDS
GCCATAGCATAGCAAATTTC+CGG 0.300279 6.2:+15730438 None:intergenic
AATGTCACAATTACTTTGAT+TGG 0.302983 6.2:-15735828 MS.gene55442:CDS
GACCAGTTCCCTACACTAAA+TGG 0.303871 6.2:+15732432 None:intergenic
ACTTGGCGTACAAACCTCTT+TGG 0.316515 6.2:+15732335 None:intergenic
TTAGCTTGATCAAGAGTTGA+TGG 0.319249 6.2:+15728318 None:intergenic
AGTAACCTTGTAATATTTCC+AGG 0.327180 6.2:+15731815 None:intergenic
CCAGCAGGTTTGTTTATTGC+AGG 0.328740 6.2:+15733554 None:intergenic
TCTTTGGGATAAGGAGGTTC+TGG 0.330835 6.2:+15732351 None:intergenic
TGAGATTCAGTGTTGGGAAT+TGG 0.334660 6.2:-15728416 MS.gene55442:CDS
GTTGATGGATCCGGTGGGTC+TGG 0.346866 6.2:+15728333 None:intergenic
CTATATTTGATGTTCGGTTC+AGG 0.346984 6.2:+15728456 None:intergenic
GAGATGTATGGATACTCTTT+TGG 0.352878 6.2:-15732681 MS.gene55442:CDS
CAACTAAGAAGCCTTGTAAT+AGG 0.364190 6.2:+15735757 None:intergenic
CTTGGCGTACAAACCTCTTT+GGG 0.372919 6.2:+15732336 None:intergenic
GCAGCAGGTTTATTAATTGC+TGG 0.375401 6.2:+15731062 None:intergenic
GACAAACCATTCAGAGGAAT+TGG 0.375531 6.2:-15728091 MS.gene55442:CDS
AATGCACACCATACTTTGAT+TGG 0.381172 6.2:-15731880 MS.gene55442:CDS
ACAGGAGACATATATGAATC+AGG 0.384131 6.2:-15730362 MS.gene55442:CDS
GAGATGTATGGTTACTCATT+TGG 0.396357 6.2:-15730329 MS.gene55442:CDS
CCAACTTTGTCGCACAGCTC+TGG 0.400653 6.2:+15732843 None:intergenic
GTTCGTTGTCACAACCAATA+AGG 0.401734 6.2:+15730537 None:intergenic
AAGCATGCAATCAGGATTCA+TGG 0.403064 6.2:-15727887 MS.gene55442:CDS
ATGAGTCGACATCCATTAAC+AGG 0.404518 6.2:-15731722 MS.gene55442:CDS
AACCTGCTGCAGTTCTTCAT+TGG 0.405372 6.2:-15731049 MS.gene55442:CDS
CACTTGCCAATTCCTCTGAA+TGG 0.410444 6.2:+15728085 None:intergenic
ATGGATTGAGATTCAGTGTT+GGG 0.410758 6.2:-15728422 MS.gene55442:CDS
AAAACTCTATATTTGATGTT+CGG 0.416106 6.2:+15728450 None:intergenic
TTGGGATGTCTACTCATAGA+AGG 0.417089 6.2:+15735676 None:intergenic
ATGAGTAGACATCCCAAAAC+TGG 0.419318 6.2:-15735670 MS.gene55442:CDS
CACTGGGCGACAAACATAAC+TGG 0.424302 6.2:-15732732 MS.gene55442:CDS
AAGAGAAGAAGAATTATAAA+GGG 0.425177 6.2:-15735726 MS.gene55442:CDS
GGTCATATTGATATTACAAA+AGG 0.428237 6.2:-15735895 MS.gene55442:CDS
TACCCATAATATGCTGCAAC+AGG 0.437503 6.2:+15733407 None:intergenic
CCAACTTTGTCGCAAGCCTC+TGG 0.438300 6.2:+15730491 None:intergenic
TTGAATTCCCACGGTGTGAT+TGG 0.438756 6.2:+15730960 None:intergenic
ACAGTTTGCCAATCAAAGTA+TGG 0.439045 6.2:+15731872 None:intergenic
TACTCGTAAGGAGTTGAAAC+AGG 0.446505 6.2:+15730921 None:intergenic
GAATTGTTTATGAATGCAAC+CGG 0.448605 6.2:-15732380 MS.gene55442:CDS
TACTTTGATTGGCAAACTGT+TGG 0.449037 6.2:-15735817 MS.gene55442:CDS
GAATTATAAAGGGATGCATT+TGG 0.450756 6.2:-15735716 MS.gene55442:CDS
AGTGGAACTTCAAGGGAAAT+CGG 0.451336 6.2:-15728156 MS.gene55442:CDS
CCCTCGTGAGGGAATTGAAC+CGG 0.452336 6.2:-15732475 MS.gene55442:CDS
GAGGATTTAAGGAAGTATAA+AGG 0.453713 6.2:-15731779 MS.gene55442:CDS
ACACCCGTTGATCGTGATGA+TGG 0.453782 6.2:-15731941 MS.gene55442:CDS
AACCGGTTCTTCTTCACTAC+GGG 0.454993 6.2:-15732458 MS.gene55442:CDS
CATTATGCAAGAAATATAAC+AGG 0.458713 6.2:-15730380 MS.gene55442:CDS
AATGTGTAGGAGCCAGATCT+TGG 0.463486 6.2:+15731756 None:intergenic
GAAGTATAAAGGCCAAGATC+TGG 0.467544 6.2:-15731768 MS.gene55442:CDS
CAGAAGAAAGTGGAACTTCA+AGG 0.468519 6.2:-15728164 MS.gene55442:CDS
TTTGATGATGATAATAATGA+TGG 0.468742 6.2:-15735917 MS.gene55442:CDS
ATCTCATCTTTCTGAACACT+TGG 0.468861 6.2:+15728045 None:intergenic
GGCCTGTTGCAGCATATTAT+GGG 0.468926 6.2:-15733409 MS.gene55442:intron
CAAGTTCCCAAGGTAAAATT+GGG 0.469455 6.2:+15733447 None:intergenic
AGCCCGTAGTGAAGAAGAAC+CGG 0.470509 6.2:+15732456 None:intergenic
ACATAACTGGTGACATATAC+GGG 0.471219 6.2:-15732719 MS.gene55442:CDS
TTGATGGATCCGGTGGGTCT+GGG 0.471560 6.2:+15728334 None:intergenic
GGATGAAACATCATAGTAGA+AGG 0.471889 6.2:-15727915 MS.gene55442:CDS
TTTCTAAAACAGAAGAAGTA+CGG 0.474428 6.2:-15732767 MS.gene55442:CDS
TTTATTGCAGGTATTACAGT+TGG 0.474686 6.2:-15732182 MS.gene55442:intron
ATAGAAGGAACTTGAAAAGT+AGG 0.474885 6.2:+15735691 None:intergenic
GGATGGATCAGTGAGATGTA+TGG 0.475233 6.2:-15732693 MS.gene55442:CDS
AGGAGAAGAAGCATGCAATC+AGG 0.477396 6.2:-15727895 MS.gene55442:CDS
TACCATTTAGTGTAGGGAAC+TGG 0.477535 6.2:-15732434 MS.gene55442:CDS
GTACAAACCTCTTTGGGATA+AGG 0.477585 6.2:+15732342 None:intergenic
TGCATAAACATTATAAATGA+AGG 0.478681 6.2:-15732115 MS.gene55442:CDS
GTCATATTGATATTACAAAA+GGG 0.482231 6.2:-15735894 MS.gene55442:CDS
TTGATGTGGTTAACAAATGT+TGG 0.485720 6.2:-15728365 MS.gene55442:CDS
GACATCCCAAAACTGGTGAT+TGG 0.487943 6.2:-15735663 MS.gene55442:intron
CCCTCACGAGGGACATAACC+TGG 0.489875 6.2:+15732486 None:intergenic
ACCCAAAACCTGAAAGAACT+TGG 0.492062 6.2:+15728021 None:intergenic
TTCGGTTCAGGAACATATCC+CGG 0.493071 6.2:+15728468 None:intergenic
TTACTCATTTGGCGCGGCTG+AGG 0.493499 6.2:-15730318 MS.gene55442:intron
AGCCAATGAAGAACTGCAGC+AGG 0.494136 6.2:+15731047 None:intergenic
TGGGAACTTGGTGCAGAGAA+AGG 0.495088 6.2:-15733434 MS.gene55442:CDS
GACATCCATTAACAGGAGAT+TGG 0.499712 6.2:-15731715 MS.gene55442:intron
AGCCAGTGTACTACCCCAGC+AGG 0.502236 6.2:+15733539 None:intergenic
AGAAGAAGTACGGGAAGATA+AGG 0.503586 6.2:-15732757 MS.gene55442:CDS
GTTCCATCATCACGATCAAC+GGG 0.503753 6.2:+15731938 None:intergenic
TTCCATATTGATATCAAAAG+AGG 0.505001 6.2:-15728196 MS.gene55442:CDS
TTTCGTTTGAGTGGACAGCC+TGG 0.507263 6.2:-15731833 MS.gene55442:CDS
AAACTCGCTCACCATGATGA+TGG 0.507418 6.2:-15732402 MS.gene55442:CDS
GATAACTTGATGCTCTATCC+AGG 0.511078 6.2:-15732504 MS.gene55442:CDS
GATGAGAAAACAGAAGAAAG+TGG 0.515505 6.2:-15728174 MS.gene55442:CDS
TTCTAAAACAGAAGAAGTAC+GGG 0.516719 6.2:-15732766 MS.gene55442:CDS
TATTACAAAAGGGGCAAAGA+AGG 0.516819 6.2:-15735884 MS.gene55442:CDS
CCAGAGCTGTGCGACAAAGT+TGG 0.519233 6.2:-15732843 MS.gene55442:CDS
ACTTTGATTGGCAAACTGTT+GGG 0.521798 6.2:-15735816 MS.gene55442:CDS
TCCGGAAATTTGCTATGCTA+TGG 0.523585 6.2:-15730439 MS.gene55442:CDS
CTGCAATAAACAAACCTGCT+GGG 0.524831 6.2:-15733553 MS.gene55442:CDS
AAGGGGCAAAGAAGGTATCA+TGG 0.529389 6.2:-15735876 MS.gene55442:CDS
AGTCAGTAGGCTTACTCGTA+AGG 0.533132 6.2:+15730909 None:intergenic
CCTGCAATAAACAAACCTGC+TGG 0.535312 6.2:-15733554 MS.gene55442:CDS
TGATCAAGAGTTGATGGATC+CGG 0.535407 6.2:+15728324 None:intergenic
CAGCAGGTTTGTTTATTGCA+GGG 0.535736 6.2:+15733555 None:intergenic
CGTTCCATCATCACGATCAA+CGG 0.536838 6.2:+15731937 None:intergenic
CAATGAGATACTGATATACC+CGG 0.538068 6.2:-15728487 MS.gene55442:CDS
TAATAAATAGTCCTCGCCTT+CGG 0.538311 6.2:+15732146 None:intergenic
GGCCAAATTCCCAGACCCAC+CGG 0.542009 6.2:-15728343 MS.gene55442:CDS
GGAATTGGCAAGTGTTCAGA+AGG 0.542493 6.2:-15728076 MS.gene55442:CDS
TTCTCTGCACCAAGTTCCCA+AGG 0.542674 6.2:+15733437 None:intergenic
ATGGTTTGTCACGACACGAT+TGG 0.543260 6.2:+15728104 None:intergenic
AGCTGTGCGACAAAGTTGGC+GGG 0.543694 6.2:-15732839 MS.gene55442:CDS
TGATGTGGTTAACAAATGTT+GGG 0.543907 6.2:-15728364 MS.gene55442:CDS
CATAAACAATTCCATCATCA+TGG 0.544004 6.2:+15732391 None:intergenic
TACTGAATCAATACTTGCAT+CGG 0.544833 6.2:+15728128 None:intergenic
CCAGAGGCTTGCGACAAAGT+TGG 0.545670 6.2:-15730491 MS.gene55442:CDS
GAGCTGTGCGACAAAGTTGG+CGG 0.546257 6.2:-15732840 MS.gene55442:CDS
AGAACCTCCTTATCCCAAAG+AGG 0.550034 6.2:-15732349 MS.gene55442:intron
TCGGTTCAGGAACATATCCC+GGG 0.554757 6.2:+15728469 None:intergenic
GGGTGGATCAGTGAGATGTA+TGG 0.554822 6.2:-15730341 MS.gene55442:CDS
AACTTGGTGCAGAGAAAGGA+AGG 0.557758 6.2:-15733430 MS.gene55442:CDS
AACAACCTGGTCCTATTACA+AGG 0.558589 6.2:-15735768 MS.gene55442:CDS
AGCAATGGACGCGACCGGCA+CGG 0.562849 6.2:-15727862 MS.gene55442:CDS
TTATGCATATAGATGATCTC+CGG 0.563181 6.2:-15730457 MS.gene55442:CDS
GGAGCTTCGACAAAGCAGAC+TGG 0.563412 6.2:-15728395 MS.gene55442:CDS
GTGACATATACGGGAAAGGA+TGG 0.565093 6.2:-15732710 MS.gene55442:CDS
TGGAAAGCAATGGACGCGAC+CGG 0.565743 6.2:-15727867 MS.gene55442:CDS
CTACTACAGCATGGAGCGAA+TGG 0.567967 6.2:-15732088 MS.gene55442:CDS
GAACCGGTTCTTCTTCACTA+CGG 0.568198 6.2:-15732459 MS.gene55442:CDS
AGAAGAAAGTGGAACTTCAA+GGG 0.569929 6.2:-15728163 MS.gene55442:CDS
TACTTTGATTGGCAAACTGT+AGG 0.571418 6.2:-15731869 MS.gene55442:CDS
ACGGGCTACCATTTAGTGTA+GGG 0.573227 6.2:-15732440 MS.gene55442:CDS
CAGGAGACATATATGAATCA+GGG 0.573524 6.2:-15730361 MS.gene55442:CDS
AACCTGCTGGGGTAGTACAC+TGG 0.574193 6.2:-15733541 MS.gene55442:CDS
CGAGAAGCTTTGAATTCCCA+CGG 0.575191 6.2:+15730951 None:intergenic
TATGGATTGAGATTCAGTGT+TGG 0.586229 6.2:-15728423 MS.gene55442:CDS
TACGGGAAGATAAGGAACAC+TGG 0.590462 6.2:-15732749 MS.gene55442:CDS
CAAACCTCTTTGGGATAAGG+AGG 0.591702 6.2:+15732345 None:intergenic
CTTTGTCGCAAGCCTCTGGA+TGG 0.593116 6.2:+15730495 None:intergenic
GAGGCTTGCGACAAAGTTGG+TGG 0.593292 6.2:-15730488 MS.gene55442:CDS
AAGGAGGTTCTGGAAAGAGC+CGG 0.595528 6.2:+15732361 None:intergenic
TGCAATAAACAAACCTGCTG+GGG 0.596458 6.2:-15733552 MS.gene55442:CDS
CCAGGTTATGTCCCTCGTGA+GGG 0.599845 6.2:-15732486 MS.gene55442:CDS
AGAAGCCTTGTAATAGGACC+AGG 0.600804 6.2:+15735763 None:intergenic
ATTCCGTGGAGAAAACTGTA+TGG 0.601242 6.2:+15731900 None:intergenic
AATCAACATCACGGCCGTGC+CGG 0.603120 6.2:+15727848 None:intergenic
TCAGGATTCATGGAAAGCAA+TGG 0.603546 6.2:-15727877 MS.gene55442:CDS
TCATATTGATATTACAAAAG+GGG 0.604366 6.2:-15735893 MS.gene55442:CDS
GTCATAGAAGACGAGGAACA+AGG 0.606626 6.2:-15727936 MS.gene55442:CDS
ATTGGCAAGTGTTCAGAAGG+AGG 0.606869 6.2:-15728073 MS.gene55442:CDS
TCCAGGTTATGTCCCTCGTG+AGG 0.609016 6.2:-15732487 MS.gene55442:CDS
TCAAGAGTTGATGGATCCGG+TGG 0.613751 6.2:+15728327 None:intergenic
TCGAAGGTCACTGATATGAA+AGG 0.614152 6.2:+15732809 None:intergenic
AAAGTATGGTGTGCATTCCG+TGG 0.615104 6.2:+15731886 None:intergenic
CCCAAGGTAAAATTGGGCCA+CGG 0.615795 6.2:+15733453 None:intergenic
CTTGTTCACAGATAGGACTT+CGG 0.617243 6.2:-15732539 MS.gene55442:intron
GAAGGTCTTCTACTACAGCA+TGG 0.622146 6.2:-15732097 MS.gene55442:CDS
ATGGTTGCCCTAAGCCAGCA+TGG 0.624220 6.2:-15732069 MS.gene55442:CDS
TACGGGCTACCATTTAGTGT+AGG 0.626647 6.2:-15732441 MS.gene55442:CDS
TGGGAATTCAAAGCTTCTCG+TGG 0.626791 6.2:-15730948 MS.gene55442:CDS
ACACTGGCTTAAACATAGCA+AGG 0.629033 6.2:-15733525 MS.gene55442:CDS
ACTGGTGACATATACGGGAA+AGG 0.631175 6.2:-15732714 MS.gene55442:CDS
TATAGGAAAGCTAAACAACC+TGG 0.631459 6.2:-15735781 MS.gene55442:CDS
GACAGCCTGGAAATATTACA+AGG 0.634109 6.2:-15731820 MS.gene55442:CDS
ATCAATATGGAATCAGCACT+AGG 0.635467 6.2:+15728207 None:intergenic
AATGGATGTCGACTCATCGA+GGG 0.640382 6.2:+15731728 None:intergenic
GTATGGTTACTCATTTGGCG+CGG 0.640480 6.2:-15730324 MS.gene55442:CDS
ACGGGAAGATAAGGAACACT+GGG 0.640874 6.2:-15732748 MS.gene55442:CDS
TTGATGATGATAATAATGAT+GGG 0.641199 6.2:-15735916 MS.gene55442:CDS
GACATGCTTAGCATAGAATG+TGG 0.641341 6.2:-15728276 MS.gene55442:CDS
TTGTTTACAAATCAACATCA+CGG 0.647518 6.2:+15727839 None:intergenic
GAGAGGACCAATCACACCGT+GGG 0.657525 6.2:-15730967 MS.gene55442:CDS
ACCGGTTCAATTCCCTCACG+AGG 0.658500 6.2:+15732474 None:intergenic
TGGAACTTGACGCTAACCGA+AGG 0.659239 6.2:-15732162 MS.gene55442:CDS
ATCGAGGGAACATAATGTGT+AGG 0.661006 6.2:+15731743 None:intergenic
GTTACTGAGCTGCAATGACG+AGG 0.661450 6.2:-15731798 MS.gene55442:CDS
TAATGGATGTCGACTCATCG+AGG 0.663562 6.2:+15731727 None:intergenic
GACGCAGACATGATTATCCG+TGG 0.665609 6.2:-15733470 MS.gene55442:CDS
CTTGACGCTAACCGAAGGCG+AGG 0.669541 6.2:-15732157 MS.gene55442:CDS
TGTCGTGACAAACCATTCAG+AGG 0.670388 6.2:-15728097 MS.gene55442:CDS
CAAGAGTTGATGGATCCGGT+GGG 0.680995 6.2:+15728328 None:intergenic
CGACAAAGCAGACTGGCGAG+AGG 0.681943 6.2:-15728388 MS.gene55442:CDS
ATGGCTGCATAAAACAGAGG+AGG 0.684775 6.2:-15730420 MS.gene55442:CDS
AATGAGATACTGATATACCC+GGG 0.688331 6.2:-15728486 MS.gene55442:CDS
GATGCTGATATGATCATGAG+AGG 0.690513 6.2:-15730984 MS.gene55442:CDS
TGTTCGGGTCATAGAAGACG+AGG 0.693244 6.2:-15727943 MS.gene55442:CDS
GCTATGGCTGCATAAAACAG+AGG 0.699820 6.2:-15730423 MS.gene55442:CDS
AGACTGGCGAGAGGTTGATG+TGG 0.700331 6.2:-15728379 MS.gene55442:CDS
GAGACATATATGAATCAGGG+TGG 0.708598 6.2:-15730358 MS.gene55442:CDS
CCGGTTCAATTCCCTCACGA+GGG 0.720841 6.2:+15732475 None:intergenic
ATTACACACTAGCCATCCAG+AGG 0.725347 6.2:-15730507 MS.gene55442:CDS
TGAGAGGACCAATCACACCG+TGG 0.744131 6.2:-15730968 MS.gene55442:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.2 gene 15727843 15735956 15727843 ID=MS.gene55442
chr6.2 mRNA 15727843 15735956 15727843 ID=MS.gene55442.t1;Parent=MS.gene55442
chr6.2 exon 15735664 15735956 15735664 ID=MS.gene55442.t1.exon1;Parent=MS.gene55442.t1
chr6.2 CDS 15735664 15735956 15735664 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15733410 15733580 15733410 ID=MS.gene55442.t1.exon2;Parent=MS.gene55442.t1
chr6.2 CDS 15733410 15733580 15733410 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15732671 15732914 15732671 ID=MS.gene55442.t1.exon3;Parent=MS.gene55442.t1
chr6.2 CDS 15732671 15732914 15732671 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15732350 15732550 15732350 ID=MS.gene55442.t1.exon4;Parent=MS.gene55442.t1
chr6.2 CDS 15732350 15732550 15732350 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15731716 15732194 15731716 ID=MS.gene55442.t1.exon5;Parent=MS.gene55442.t1
chr6.2 CDS 15731716 15732194 15731716 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15730924 15731088 15730924 ID=MS.gene55442.t1.exon6;Parent=MS.gene55442.t1
chr6.2 CDS 15730924 15731088 15730924 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15730319 15730562 15730319 ID=MS.gene55442.t1.exon7;Parent=MS.gene55442.t1
chr6.2 CDS 15730319 15730562 15730319 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
chr6.2 exon 15727843 15728532 15727843 ID=MS.gene55442.t1.exon8;Parent=MS.gene55442.t1
chr6.2 CDS 15727843 15728532 15727843 ID=cds.MS.gene55442.t1;Parent=MS.gene55442.t1
Gene Sequence

>MS.gene55442

ATGAAAAAAGTTTGGATTTTGATGATGATAATAATGATGGGTCATATTGATATTACAAAAGGGGCAAAGAAGGTATCATGGAAGATACACACACTGTTTTCTGTTGAATGTCACAATTACTTTGATTGGCAAACTGTTGGGTTGATGAATAGTTATAGGAAAGCTAAACAACCTGGTCCTATTACAAGGCTTCTTAGTTGTACTGATGAAGAGAAGAAGAATTATAAAGGGATGCATTTGGCTCCTACTTTTCAAGTTCCTTCTATGAGTAGACATCCCAAAACTGGTGATTGGTAAGATACTAATACTTATGATAATTTGTGTAGTACTGATAATTTACATTGAAAGCGTGTTCGGTGTCTAATAAGTGTAGTTACACTCAATCACTTTTGTTTTGTTCATTTATTATATGTGTCTAGGTGTCAGTGTTGTGTGTGTCTGGTGTCTATGTCTGTGTTTCATAGATGTTGATGCTAATACTAATAGTTTGTTATTAGTGTTGAAATTGAGTTTTTTTAGTTTTGATTTTTTAGGAATGTTTTTGAATTTGAATTGTGAAATGTAGATTGGTTTGTGTGGTTATATTTAAAGAGATGTTAATGTGGTTGACTTTAGTAGATTGGCTTCGGTGGTTAAATGTGAAGTGCTGTTAATTTTAACGTGGTTTACTTAGGTAGATTGGTTTGTGCGGTTATATGTGAAGTGATATTGTTAGGTATAGACACTTCGGATTGAAGGCGTATCAGTGTCTCACGTCTGCACAATCAATTGTACTTTTTTTGTTTGTTATTTTTGGTGTCCATGTACTTGTCAATGGTTAAATGTGAGGTGTTGTTAATGCGACTTTGGTTGATTGGTTTGTGTGGTCAAATGCGAAGTGATTTTAATGTGATTGACTTTGGTAGATTGGTTTGTGTTGTGTAATTAGATGTGAAGTGTATTAATGTGGTTGACTTTATATTGTCCCGAGCTGGCAGTTTGGTTGGTGAGCTGAGGAACACGAACGAAGTACTAACCAGGAGATCAGGGTTCAAATCCTTCAAACTAACATAACCCACTAACATTTGCTTATCCAAAAAAATGTCACATTCTTGAAGTCCGCTTGATGTGTTGTTCTGCTTAGGCATGCTTTAGGGTTAGTGTTTGTTATTTATTGAAACTATACGCATATGTTGTTGATTGCTGTGATAGTGAAATTATTTCCTTAAATTTTGTACTAGATTTGTGTTTTCAACGGCTAAATATATTGTAAATTGGGTAATTATGTGATGATTCTATGTAATTACAATAAATAGGGAAATTATGAATCTTTGAAACCAGCATATCTGGTTTCATTCAACCAACTTCTATTTTCTCAATTATTATCAGCATCTACGTGTCCGTGTCTGTGTTAGTGCTTCATAGTTGCTGATACTAATACTAATAGTTATTAGTGTTGAAAGTGAATTTATATTTTGCTATCTTAGGAATGTTTTTGAGTTCGGACTGTGAAATGATGTTAATGAGGTTGACTTTGATAGTTTGGTTTTTGAATGTTTTCAATGTTGGTTATTGGCATATTCTTGAAGTCTGCTCTATGTGTTTTGTGTGTGTGTAGTTTTGTTATATACAGTAGCTGCTGCTGCTGTTGTTCTTAAGCATGCTTTGGGGTCAGTTTTTGTTATTTCTTTAAACTGTATGTGCAAATATGGCCTTGTAGTTTGCTGTAGTAGTGAAATGATTTCTGTGAATTCTGCTCTTGATTTGTATGTTTCAAATGTTCAATACTATAATGTAAATTGGGTACTTATGCCCTGATTCTATGTAATTACGATCATAAGGGTAGCTACAAATCCTTGTAAATAAATTATGGTTCTTGTATATGTAATATTCTCTGCTGTGTAATTCAGAAACAAAGATTACATCATTTGTCTCATCCTATGTAACACTGATAGTTTAGATTTGATGGCTCGTACGACACTAACACGTGTAGTTACATTCATTCACTTCCATTTTCGCAAATTATTACCCATGTCTACATGTAAGTGTCGGTGTTGTATTTGGTGTTTTTGTTTGTGTAGTATTTCATAGGCCTCATCTCTTTTTCTTCTCGACAACAATAAGATTGATTTCTAAAATTCCAGCATGCTGGTTGCTGTATCTTCTACTTCTCTGCGTACTTATGAATCTTGACGTTAACAAGAAGATTGCAGTCTTCTCAACACATGTTTTTGTTTGTGTAGTATTTTGGCATCATTTAAGTTGTTCTCTCCCATATCCCCGCTTAAAATGTCCCTTTAACAAATATGATGCTTCAATACCCAAAAATTTGTATATAAAGCTGAATCATTTTCCCGAGATAGCAAAATGAGAAATAAATTTTTGTCCTCTATGCAGGTACCCTGCAATAAACAAACCTGCTGGGGTAGTACACTGGCTTAAACATAGCAAGGATGCAAAAAATGTTGATTGGGTTCTCATTCTAGACGCAGACATGATTATCCGTGGCCCAATTTTACCTTGGGAACTTGGTGCAGAGAAAGGAAGGCCTGTTGCAGCATATTATGGGTATTCATTAATTTCTTACTCGTTTCTTACAGACTCCAAATAGTGATATTCAGTAAAATAATTCATGTTATAAACAACTTAAGTAAGAACTAATAGCATAAACGGTTATCATATAAGTGGTTATGGAAGACAACTTATAGCATAAAGTCAAACTCTTCTCATATACGGTATAAGTTGTTTTCATATGCTATCCTAGAGAGCTTATGGAAGTAAGCTGAAAACAACTTATGGACATGTCAGAAGTTGTTTCCATAAGCTCCTCCAATTTGGAAGGATGCTTATGGACTTGTACAACTTACACTGGCAGTAAACAAATTTTAGCAGGAAATCAGAGAACAGGGTTTTGTTAAAATAAAAAATGGAAGATCTTTGCTTTGAAGTTATGAAACTGGGTTAAATCTCATGGAGTACAAATATTTGTCTTGTATTTAATGTTCAGTTTTTAATTTTCTGGTTCATAATTGAAGCGTGTTACATGCCAATTTTTTTGTCCAGGTACTTAAAAGGTTGTGACAATATTTTGGCTAAGCTGCACACGAAAAATCCAGAGCTGTGCGACAAAGTTGGCGGGCTTTTGGCCTTTCATATCAGTGACCTTCGACGATTCGCCCCCTTGTGGCTTTCTAAAACAGAAGAAGTACGGGAAGATAAGGAACACTGGGCGACAAACATAACTGGTGACATATACGGGAAAGGATGGATCAGTGAGATGTATGGATACTCTTTTGGCGCTGCAGAAGTGAGTAAAATACCTTAAATTAACACGTTCATTATTGTGATTATCTATTCAGCTTTCACTAATTGTTGTTTGTTTTCTCTTCTTTCTGCCCTTCCCTTTTGTTTTCTCTCTTGTTCACAGATAGGACTTCGGCACAAGATCAATGATAACTTGATGCTCTATCCAGGTTATGTCCCTCGTGAGGGAATTGAACCGGTTCTTCTTCACTACGGGCTACCATTTAGTGTAGGGAACTGGTCATTTAATAAACTCGCTCACCATGATGATGGAATTGTTTATGAATGCAACCGGCTCTTTCCAGAACCTCCTTATCCCAAAGAGGTTTGTACGCCAAGTATACTTATAGCATGAAACTCATGTGTTGTTTTAGAAAAATTTCTCCATTTTTTGGTCTATGTATACTGAATATATATGCACAGAAATATGGCATCAGGATTTTCTAAGTTTTGCTGATGTTGGAAATCATTTTATTGCAGGTATTACAGTTGGAACTTGACGCTAACCGAAGGCGAGGACTATTTATTAGCATAGAGTGCATAAACATTATAAATGAAGGTCTTCTACTACAGCATGGAGCGAATGGTTGCCCTAAGCCAGCATGGTCAAAATACTTGAGCTTTTTAAAAAGCAAATCTTTTGCGGAACTAACTAAGCCAAAATATGTGAATCCTGCTACTTTAAAAATGATGGATGAAGAAGTTGTCGAAACACCCGTTGATCGTGATGATGGAACGCCACATCCCAAAATCCATACAGTTTTCTCCACGGAATGCACACCATACTTTGATTGGCAAACTGTAGGACTTATGCACAGTTTTCGTTTGAGTGGACAGCCTGGAAATATTACAAGGTTACTGAGCTGCAATGACGAGGATTTAAGGAAGTATAAAGGCCAAGATCTGGCTCCTACACATTATGTTCCCTCGATGAGTCGACATCCATTAACAGGAGATTGGTAATTATTTTTCTAAGTTGGAGTATTTCAATTTTCATTAGCCTGATTTAAGTTTTTCATTTTTGTTGCTCGTCATTTCTGCACGGATGTTTACTGTGATTGGGACAAAGTTGTCGATGTGAACTCACGAAATCAATCATGGATGCAAAGGACCAAGGGCCTGTCTGTTACAATCTTTCATAAAATGAAAAAAATCAGTTTTTGAGTTTTTCATTCGTTTGTTACCACTTTTCACAGAATAAAAATCTGAAAGAAAAAAAAAATTTTAACACTGCTTAAAATATGAAGATTTTTTGAATAGCTTCTCTTTAAAATCATTTTCGATAGATGACTTTTCCTTAGAAAAATGATTTTCATTATGGTAAACAAACACATAATAGTTTCTGGTTTTCTTTAAAACCTCTAAATCATTTCTTTTAATCTGTAACAAACAGACCTTAAATTTTGTAGCATCATTCTTTTATAGATATCTAAAGCTAATCTTGGAAAAAAATCTAACTTGATAAGTTAACCCTCATGATTAATTACTATGTTAAATTGTACTATTTCCCATGTTAGTTTGTGCTTCCGGGGGGTGGGAAATTTTATAATAATTTCGGATGATAAGTTCTTCTGTTTTCATTTTAGGTATCCAGCAATTAATAAACCTGCTGCAGTTCTTCATTGGCTTAATCATGTAAATGTTGATGCTGAATACATAGTTATTCTTGATGCTGATATGATCATGAGAGGACCAATCACACCGTGGGAATTCAAAGCTTCTCGTGGACATCCTGTTTCAACTCCTTACGAGTAAGCCTACTGACTTGGGTTGATGTTTATCAGGCCTGTTAATGTTAATTTAAACCAGTGTTGTTAAATAATGGCCTTAGTGGTGCCTTAACCTTATAATGTGGTGGAATTTGAACAAATCGCTACGTAGTATAAAATATTGTCAAATATCGACTTTAGCGACTCTATAGCATTGTTGCGTAGCATAATTTGAACAAACTACTATATTACGCTATCTGCGATTGACAACATTGATTTAAATGCAGTTTTGATGACTGCATTTTTCATGGTTGCAAACATACAGGTCTCTATTTTTATTTTGTTTTATCGTTCATATTCAATTCGATAACTGATCTGTATTTTAATAATTTTTGCATGCCAGCTACCTTATTGGTTGTGACAACGAACTTGCAAAATTACACACTAGCCATCCAGAGGCTTGCGACAAAGTTGGTGGTGTAATCATTATGCATATAGATGATCTCCGGAAATTTGCTATGCTATGGCTGCATAAAACAGAGGAGGTTCGAGCTGATAGAGCTCATTATGCAAGAAATATAACAGGAGACATATATGAATCAGGGTGGATCAGTGAGATGTATGGTTACTCATTTGGCGCGGCTGAGGTATTTTGTTGTTACATTCATATCTTCATGCATACTTGACCAATGTAGTCAGGAACGAGTCCCAGCATGTAGGGTCGTACGATCTTACGTGCCACAGTACCTCAACCGTGCTTCGACTCTACTCTGGTTCGGTTTTGCTCTGTTTCCTCTGTTTTTTGCCATTTGTCCTCTGTTTTCTCTGTTTTTTGCTGTTTTTCCTCTGTTTTTCTCTATTTTGTTGCTTGGTTCCTTTGTTTTTCCTCTATCATCTCTGCTTATTGCCATTTTTCCTCTGTTTTTCCCTGTTTTGTTGCTTGGTTCCTCTGTTTTTCCTCAATTATCTCTGTTTTGATGCTTGGTTCCTCTGTTTTCCCTATATTTTCTCTATCTATTTCTCTCAACTCTGTCAAAAACCTACCGATCCTACTTACGAACCGTGTTACGTTCCCCGACTTTACGTCCCTTCACCAGCCGATCGAACCTACGTAAGAACTCGTTCCTGACTACATTGCTTGACACACTTGTTCATATGATTGTCAATGTCGTAATATTAGAAGTATATCCTTTTCAGTTTGAGACCTTGCTCCTTGAGATTTAGAAACATTTTATAGCTTCCTTAATTTAGAAAAGAAAAATAAGCCCTCTCCCCCCTCTCCTTTCAAAATCCTCAATCCAAACATACCCTAATATGTTTATCACTCTGTATTTTAACTCTGTCTTACCAGCTAGAAGCTCTCTCTATAAAAAATTGTGCTGGTTAGATATTTTGCTACGTAGAAAATTAAGTCATGAGTTCAGTTCATTTGTTTGTTTTAAATGTGCTCAATTGACTGATGTGTAGAGAGAAAAGAGTAACAAAATGATCATAATCATAAATTGGAATAATTAAATAGAGAGCTTCAAGTAGCGCTGGTCGCATGAGAGATTTTCACAGGGGTCATAGCCTTAATGCAACCCTGCCCAGGTGTCCATTATCTTCATCCGGTTTGTGAAGCTTTAACCGACATTATCTCTGTCTGCTACTCCACCTTAACGTCCTACTGTGCTGGCTATTCCATGAGATTACCTGAATGTTTCTTTGGGTATTATTGTGCAGTGGCTTGTTACTGGAGGTTCTTCTATCTCCATATTAAGAACGGATTAATGATCACCGATTCTGAGTTGTCTTTCATGCATCAGGTTAAATCATTGCACTTAGAGGTTCCACTGTTGATTGCACATTATCTAACTGGTTTTGGCAATACTACCTTTCCTTCATAGTCGCGATATCGTGTTTCAGCTGATACCAGCCATTTTACCAAAACTATCCTTGCTTGGCAGTTTATGAGGTGAGGATGTTCGCAAGCCTTGAGGGTGGCAAAGACCTGTTATAGCTGGTGGTTTACGTCCTTCGCTTGCCTGTATAGGCTATGGCTCCTGTGAAAATCTCTCATGCGACCAGCGCTACTTACTTGAGAGGCTAATGGGGTGTTTGTTTTAGAGGCTATGACTGACACTTTAGATTTGCTGAGTCTGTGTCCTGAGAAGATCTCCGAGGAGCAATAGCATTTGGGTATTGTTGATACTTAACATAGTATTAGATCATCATAACCTAGTATTAGGAATTCAACAATTTTTACCCTTTTTTTTATCATTAAATAGTACTTCTGCACAGTTAAGGGAAGAACTTTGCAGTGTTCATGCATCAAATATTAATGTAGTTACTTCCTTTGCTTTTCTCTTTCATGGTGTGTTACCACAAATTGTTACGCTACACTACACGAAATTTTTTCATTCTATAACCAGTGATGTTATTCATTTGATGCAGTTGAAACTGAAGCATACAATAAGCAATGAGATACTGATATACCCGGGATATGTTCCTGAACCGAACATCAAATATAGAGTTTTTCATTATGGATTGAGATTCAGTGTTGGGAATTGGAGCTTCGACAAAGCAGACTGGCGAGAGGTTGATGTGGTTAACAAATGTTGGGCCAAATTCCCAGACCCACCGGATCCATCAACTCTTGATCAAGCTAATAAGGAGAATTTACGACGAGACATGCTTAGCATAGAATGTGGAAAAACCTTAAATGAAGCACTTGAAATTCATCACAAGAAAAAGTGTCCTAGTGCTGATTCCATATTGATATCAAAAGAGGATGAGAAAACAGAAGAAAGTGGAACTTCAAGGGAAATCGGCAACACCGATGCAAGTATTGATTCAGTAACCAATCGTGTCGTGACAAACCATTCAGAGGAATTGGCAAGTGTTCAGAAGGAGGAATTGCCAAGTGTTCAGAAAGATGAGATACCAAGTTCTTTCAGGTTTTGGGTGGTATTTTTATGGGCATTTTCTGGATTCGGTTTTTTGGTCGTCATTTTTGTCGTGTGTTCGGGTCATAGAAGACGAGGAACAAGGATGAAACATCATAGTAGAAGGAGAAGAAGCATGCAATCAGGATTCATGGAAAGCAATGGACGCGACCGGCACGGCCGTGATGTTGATTTGTAA
Protein sequence

>MS.gene55442.t1

MKKVWILMMIIMMGHIDITKGAKKVSWKIHTLFSVECHNYFDWQTVGLMNSYRKAKQPGPITRLLSCTDEEKKNYKGMHLAPTFQVPSMSRHPKTGDWYPAINKPAGVVHWLKHSKDAKNVDWVLILDADMIIRGPILPWELGAEKGRPVAAYYGYLKGCDNILAKLHTKNPELCDKVGGLLAFHISDLRRFAPLWLSKTEEVREDKEHWATNITGDIYGKGWISEMYGYSFGAAEIGLRHKINDNLMLYPGYVPREGIEPVLLHYGLPFSVGNWSFNKLAHHDDGIVYECNRLFPEPPYPKEVLQLELDANRRRGLFISIECINIINEGLLLQHGANGCPKPAWSKYLSFLKSKSFAELTKPKYVNPATLKMMDEEVVETPVDRDDGTPHPKIHTVFSTECTPYFDWQTVGLMHSFRLSGQPGNITRLLSCNDEDLRKYKGQDLAPTHYVPSMSRHPLTGDWYPAINKPAAVLHWLNHVNVDAEYIVILDADMIMRGPITPWEFKASRGHPVSTPYDYLIGCDNELAKLHTSHPEACDKVGGVIIMHIDDLRKFAMLWLHKTEEVRADRAHYARNITGDIYESGWISEMYGYSFGAAELKLKHTISNEILIYPGYVPEPNIKYRVFHYGLRFSVGNWSFDKADWREVDVVNKCWAKFPDPPDPSTLDQANKENLRRDMLSIECGKTLNEALEIHHKKKCPSADSILISKEDEKTEESGTSREIGNTDASIDSVTNRVVTNHSEELASVQKEELPSVQKDEIPSSFRFWVVFLWAFSGFGFLVVIFVVCSGHRRRGTRMKHHSRRRRSMQSGFMESNGRDRHGRDVDL