AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55733

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55733.t1 MTR_8g098860 96.000 275 9 2 7 279 46 320 0.0 541
MS.gene55733.t1 MTR_5g010020 54.934 304 87 16 7 272 46 337 1.10e-81 249
MS.gene55733.t1 MTR_2g097910 47.101 138 61 1 4 129 51 188 5.71e-36 131
MS.gene55733.t1 MTR_4g105130 75.676 74 18 0 7 80 46 119 1.28e-35 131
MS.gene55733.t1 MTR_2g099740 74.324 74 19 0 7 80 46 119 1.34e-35 132
MS.gene55733.t1 MTR_1g112760 74.324 74 19 0 7 80 47 120 1.71e-35 127
MS.gene55733.t1 MTR_4g065017 70.513 78 23 0 4 81 48 125 2.28e-35 129
MS.gene55733.t1 MTR_7g076740 73.611 72 19 0 7 78 47 118 5.22e-35 128
MS.gene55733.t1 MTR_5g029840 73.973 73 19 0 7 79 46 118 6.75e-35 128
MS.gene55733.t1 MTR_7g110830 75.342 73 18 0 7 79 46 118 7.20e-35 129
MS.gene55733.t1 MTR_3g028740 70.667 75 22 0 4 78 53 127 9.05e-35 128
MS.gene55733.t1 MTR_2g064160 73.239 71 19 0 7 77 45 115 1.27e-34 127
MS.gene55733.t1 MTR_3g077110 72.973 74 20 0 7 80 46 119 2.02e-34 127
MS.gene55733.t1 MTR_5g007370 76.056 71 17 0 7 77 46 116 2.25e-34 126
MS.gene55733.t1 MTR_8g017440 70.130 77 23 0 5 81 44 120 2.50e-34 127
MS.gene55733.t1 MTR_8g031360 74.648 71 18 0 7 77 48 118 3.92e-34 125
MS.gene55733.t1 MTR_1g085040 72.603 73 20 0 7 79 46 118 4.28e-34 127
MS.gene55733.t1 MTR_1g085640 71.233 73 21 0 7 79 46 118 4.71e-34 127
MS.gene55733.t1 MTR_4g091490 69.737 76 23 0 4 79 44 119 5.11e-34 127
MS.gene55733.t1 MTR_8g017540 66.667 84 28 0 5 88 90 173 6.13e-34 127
MS.gene55733.t1 MTR_2g011660 69.737 76 23 0 4 79 44 119 8.15e-34 125
MS.gene55733.t1 MTR_2g089620 69.737 76 23 0 4 79 43 118 1.33e-33 125
MS.gene55733.t1 MTR_4g478180 73.239 71 19 0 7 77 47 117 1.88e-33 125
MS.gene55733.t1 MTR_5g079670 68.354 79 25 0 7 85 45 123 1.93e-33 121
MS.gene55733.t1 MTR_8g017500 70.270 74 22 0 7 80 46 119 2.47e-33 124
MS.gene55733.t1 MTR_4g121460 64.286 84 30 0 4 87 43 126 5.33e-33 123
MS.gene55733.t1 MTR_8g095390 73.239 71 19 0 7 77 46 116 8.91e-33 122
MS.gene55733.t1 MTR_1g100653 71.233 73 21 0 7 79 46 118 1.05e-32 122
MS.gene55733.t1 MTR_8g027345 60.920 87 34 0 7 93 46 132 1.16e-32 122
MS.gene55733.t1 MTR_2g034790 50.862 116 48 1 7 113 46 161 1.19e-32 122
MS.gene55733.t1 MTR_8g017340 73.239 71 19 0 7 77 47 117 1.19e-32 125
MS.gene55733.t1 MTR_8g017350 73.239 71 19 0 7 77 47 117 1.67e-32 126
MS.gene55733.t1 MTR_3g074520 69.014 71 22 0 7 77 46 116 2.20e-32 122
MS.gene55733.t1 MTR_7g117730 69.444 72 22 0 7 78 46 117 2.49e-32 120
MS.gene55733.t1 MTR_8g017390 71.831 71 20 0 7 77 47 117 2.51e-32 124
MS.gene55733.t1 MTR_1g100667 63.636 77 28 0 3 79 43 119 2.59e-32 120
MS.gene55733.t1 MTR_4g125520 62.069 87 31 1 7 91 46 132 2.92e-32 121
MS.gene55733.t1 MTR_7g115650 65.753 73 25 0 7 79 46 118 3.67e-32 118
MS.gene55733.t1 MTR_3g097450 62.921 89 26 1 7 88 46 134 4.60e-32 120
MS.gene55733.t1 MTR_4g073420 48.780 123 52 2 7 127 46 159 4.83e-32 120
MS.gene55733.t1 MTR_3g065440 47.794 136 60 3 7 132 46 180 5.51e-32 120
MS.gene55733.t1 MTR_6g012690 68.493 73 23 0 7 79 46 118 7.78e-32 120
MS.gene55733.t1 MTR_5g078140 69.863 73 22 0 7 79 46 118 9.28e-32 120
MS.gene55733.t1 MTR_7g035075 46.269 134 65 2 7 140 48 174 1.00e-31 117
MS.gene55733.t1 MTR_4g082290 49.565 115 47 1 7 110 46 160 2.08e-31 120
MS.gene55733.t1 MTR_7g010210 40.719 167 76 4 7 155 46 207 2.59e-31 117
MS.gene55733.t1 MTR_7g010210 40.719 167 76 4 7 155 46 207 4.16e-31 118
MS.gene55733.t1 MTR_7g011170 67.123 73 24 0 7 79 46 118 4.69e-31 117
MS.gene55733.t1 MTR_2g089450 60.000 85 34 0 7 91 46 130 5.40e-31 116
MS.gene55733.t1 MTR_4g485530 64.557 79 28 0 7 85 46 124 1.00e-30 114
MS.gene55733.t1 MTR_7g087130 59.140 93 35 1 4 93 43 135 1.05e-30 117
MS.gene55733.t1 MTR_4g102380 69.863 73 22 0 7 79 46 118 1.05e-30 116
MS.gene55733.t1 MTR_1g076150 64.557 79 28 0 7 85 46 124 1.05e-30 115
MS.gene55733.t1 MTR_4g100720 69.863 73 22 0 4 76 44 116 1.17e-30 113
MS.gene55733.t1 MTR_1g043050 51.429 105 49 1 4 106 43 147 1.34e-30 115
MS.gene55733.t1 MTR_0140s0030 62.195 82 31 0 4 85 44 125 1.85e-30 117
MS.gene55733.t1 MTR_0489s0020 62.195 82 31 0 4 85 44 125 1.85e-30 117
MS.gene55733.t1 MTR_4g082230 48.696 115 48 1 7 110 46 160 2.36e-30 117
MS.gene55733.t1 MTR_3g461490 64.865 74 26 0 4 77 43 116 2.56e-30 116
MS.gene55733.t1 MTR_3g011610 67.568 74 24 0 5 78 69 142 2.64e-30 119
MS.gene55733.t1 MTR_0008s0470 48.544 103 53 0 7 109 47 149 2.90e-30 115
MS.gene55733.t1 MTR_3g083540 66.197 71 24 0 7 77 75 145 2.96e-30 115
MS.gene55733.t1 MTR_1g110460 62.500 80 30 0 7 86 60 139 3.49e-30 115
MS.gene55733.t1 MTR_0251s0050 66.197 71 24 0 7 77 47 117 3.57e-30 114
MS.gene55733.t1 MTR_1g017000 66.197 71 24 0 7 77 47 117 3.83e-30 114
MS.gene55733.t1 MTR_6g055910 51.961 102 38 1 1 91 13 114 4.55e-30 114
MS.gene55733.t1 MTR_6g006030 65.753 73 25 0 7 79 48 120 6.94e-30 112
MS.gene55733.t1 MTR_7g096930 50.000 110 52 1 7 116 46 152 7.20e-30 114
MS.gene55733.t1 MTR_7g111290 72.727 66 18 0 5 70 2 67 7.37e-30 115
MS.gene55733.t1 MTR_2g089420 42.945 163 87 3 7 163 45 207 8.55e-30 117
MS.gene55733.t1 MTR_3g039990 46.218 119 62 1 7 123 47 165 1.11e-29 114
MS.gene55733.t1 MTR_4g063100 40.491 163 85 3 5 155 39 201 1.11e-29 112
MS.gene55733.t1 MTR_8g020490 63.158 76 28 0 4 79 39 114 1.31e-29 112
MS.gene55733.t1 MTR_4g063100 40.373 161 84 3 7 155 12 172 1.70e-29 111
MS.gene55733.t1 MTR_6g055910 53.000 100 36 1 3 91 44 143 2.20e-29 112
MS.gene55733.t1 MTR_1g043080 66.197 71 24 0 7 77 46 116 2.34e-29 112
MS.gene55733.t1 MTR_2g067420 72.308 65 18 0 7 71 48 112 2.58e-29 113
MS.gene55733.t1 MTR_6g009430 63.014 73 27 0 7 79 46 118 2.65e-29 114
MS.gene55733.t1 MTR_8g042410 65.278 72 25 0 7 78 71 142 3.95e-29 116
MS.gene55733.t1 MTR_6g090405 47.706 109 54 1 3 108 43 151 5.03e-29 111
MS.gene55733.t1 MTR_0008s0390 65.714 70 24 0 7 76 47 116 5.41e-29 111
MS.gene55733.t1 MTR_1g045610 53.261 92 43 0 7 98 55 146 5.72e-29 111
MS.gene55733.t1 MTR_3g052430 61.842 76 29 0 4 79 72 147 6.55e-29 115
MS.gene55733.t1 MTR_7g111290 73.438 64 17 0 7 70 46 109 6.77e-29 113
MS.gene55733.t1 MTR_3g052450 60.526 76 30 0 4 79 71 146 3.01e-28 113
MS.gene55733.t1 MTR_6g012180 46.154 130 62 2 4 131 43 166 3.15e-28 110
MS.gene55733.t1 MTR_1g086510 61.250 80 31 0 7 86 55 134 4.95e-28 108
MS.gene55733.t1 MTR_3g103570 63.380 71 26 0 7 77 47 117 8.10e-28 110
MS.gene55733.t1 MTR_5g014990 47.959 98 49 1 7 102 47 144 1.13e-27 108
MS.gene55733.t1 MTR_2g096380 56.977 86 36 1 7 91 21 106 1.57e-27 106
MS.gene55733.t1 MTR_1g086530 59.756 82 33 0 5 86 65 146 1.58e-27 107
MS.gene55733.t1 MTR_4g057635 61.972 71 27 0 7 77 47 117 1.69e-27 108
MS.gene55733.t1 MTR_2g096380 56.818 88 37 1 5 91 38 125 2.04e-27 106
MS.gene55733.t1 MTR_7g102110 61.972 71 27 0 7 77 47 117 2.72e-27 107
MS.gene55733.t1 MTR_1g021230 63.889 72 26 0 7 78 91 162 4.44e-27 109
MS.gene55733.t1 MTR_7g109320 51.639 122 43 3 4 125 43 148 4.60e-27 108
MS.gene55733.t1 MTR_1g017140 60.563 71 28 0 7 77 47 117 5.72e-27 107
MS.gene55733.t1 MTR_0197s0010 44.000 100 56 0 7 106 35 134 1.25e-26 104
MS.gene55733.t1 MTR_1g073170 55.422 83 37 0 7 89 54 136 1.39e-26 104
MS.gene55733.t1 MTR_0063s0090 61.765 68 26 0 7 74 46 113 1.84e-26 103
MS.gene55733.t1 MTR_5g042030 63.380 71 26 0 7 77 41 111 1.93e-26 105
MS.gene55733.t1 MTR_0008s0280 62.319 69 26 0 7 75 46 114 4.34e-26 102
MS.gene55733.t1 MTR_2g095520 61.538 65 25 0 7 71 47 111 6.01e-26 104
MS.gene55733.t1 MTR_4g128670 64.615 65 23 0 7 71 47 111 1.65e-25 103
MS.gene55733.t1 MTR_1g062940 40.310 129 62 3 7 135 40 153 2.10e-25 100
MS.gene55733.t1 MTR_8g060940 64.179 67 24 0 5 71 39 105 4.62e-25 100
MS.gene55733.t1 MTR_4g097570 62.500 64 24 0 7 70 47 110 1.68e-24 100
MS.gene55733.t1 MTR_4g097570 62.500 64 24 0 7 70 48 111 1.82e-24 100
MS.gene55733.t1 MTR_7g017260 58.904 73 30 0 5 77 59 131 3.28e-24 99.0
MS.gene55733.t1 MTR_5g079120 54.430 79 36 0 7 85 95 173 3.90e-24 99.4
MS.gene55733.t1 MTR_2g088170 61.333 75 29 0 4 78 60 134 7.91e-24 100
MS.gene55733.t1 MTR_1g083630 36.486 148 83 4 5 150 44 182 1.28e-23 100
MS.gene55733.t1 MTR_5g078910 54.930 71 32 0 7 77 41 111 1.39e-23 97.8
MS.gene55733.t1 MTR_2g033170 60.000 80 32 0 7 86 58 137 1.65e-23 98.2
MS.gene55733.t1 MTR_8g006470 57.534 73 30 1 7 78 44 116 2.47e-23 96.7
MS.gene55733.t1 MTR_5g079290 54.930 71 32 0 7 77 51 121 2.58e-23 96.3
MS.gene55733.t1 MTR_0001s0360 54.795 73 33 0 5 77 39 111 3.40e-23 95.9
MS.gene55733.t1 MTR_5g079220 56.338 71 31 0 7 77 55 125 4.73e-23 95.9
MS.gene55733.t1 MTR_5g078800 56.338 71 31 0 7 77 41 111 9.39e-23 94.7
MS.gene55733.t1 MTR_0247s0040 58.824 68 28 0 7 74 41 108 1.28e-22 92.4
MS.gene55733.t1 MTR_5g078860 54.930 71 32 0 7 77 41 111 3.76e-22 94.0
MS.gene55733.t1 MTR_0193s0090 54.930 71 32 0 7 77 41 111 4.08e-22 91.7
MS.gene55733.t1 MTR_4g123040 57.500 80 34 0 7 86 58 137 6.80e-22 93.2
MS.gene55733.t1 MTR_5g078950 58.462 65 27 0 7 71 41 105 8.23e-22 92.0
MS.gene55733.t1 MTR_5g078930 57.143 70 30 0 7 76 43 112 1.98e-21 90.1
MS.gene55733.t1 MTR_4g019370 54.412 68 31 0 9 76 71 138 2.73e-21 92.4
MS.gene55733.t1 MTR_5g070020 45.570 79 43 0 9 87 155 233 6.12e-21 91.3
MS.gene55733.t1 MTR_4g105660 41.667 96 56 0 9 104 213 308 8.00e-21 91.7
MS.gene55733.t1 MTR_4g029540 50.667 75 36 1 7 80 44 118 9.60e-21 89.7
MS.gene55733.t1 MTR_3g463400 39.785 93 56 0 9 101 166 258 1.41e-20 91.3
MS.gene55733.t1 MTR_3g045430 52.113 71 34 0 7 77 47 117 5.47e-20 87.8
MS.gene55733.t1 MTR_4g088015 45.783 83 45 0 9 91 254 336 5.83e-20 89.4
MS.gene55733.t1 MTR_4g128190 47.500 80 40 2 4 82 29 107 6.23e-20 86.7
MS.gene55733.t1 MTR_5g016510 57.353 68 29 0 9 76 38 105 9.91e-20 87.4
MS.gene55733.t1 MTR_5g062790 46.753 77 40 1 4 79 40 116 1.01e-19 87.0
MS.gene55733.t1 MTR_5g041570 44.211 95 50 2 2 95 159 251 1.02e-19 88.6
MS.gene55733.t1 MTR_5g049190 41.667 96 53 1 9 104 52 144 1.03e-19 85.9
MS.gene55733.t1 MTR_7g037260 44.578 83 46 0 9 91 178 260 1.04e-19 87.8
MS.gene55733.t1 MTR_4g094982 55.882 68 30 0 9 76 38 105 1.35e-19 86.3
MS.gene55733.t1 MTR_4g082040 46.988 83 43 1 2 83 130 212 1.35e-19 88.2
MS.gene55733.t1 MTR_6g074860 53.521 71 33 0 9 79 37 107 3.88e-19 84.3
MS.gene55733.t1 MTR_7g061330 50.649 77 38 0 1 77 138 214 3.98e-19 87.4
MS.gene55733.t1 MTR_7g461410 50.649 77 38 0 1 77 138 214 3.98e-19 87.4
MS.gene55733.t1 MTR_7g035350 57.143 63 27 0 9 71 258 320 4.08e-19 87.0
MS.gene55733.t1 MTR_7g451170 45.570 79 43 0 9 87 224 302 4.55e-19 86.7
MS.gene55733.t1 MTR_1g057980 55.556 63 28 0 9 71 113 175 5.19e-19 85.1
MS.gene55733.t1 MTR_6g027340 41.489 94 53 2 3 95 42 134 5.32e-19 83.2
MS.gene55733.t1 MTR_3g077650 38.542 96 59 0 9 104 214 309 5.85e-19 86.7
MS.gene55733.t1 MTR_7g061330 50.649 77 38 0 1 77 102 178 6.13e-19 86.7
MS.gene55733.t1 MTR_6g027360 45.122 82 44 1 3 83 104 185 6.21e-19 85.1
MS.gene55733.t1 MTR_5g088080 46.753 77 39 2 4 79 43 118 6.48e-19 84.3
MS.gene55733.t1 MTR_5g088150 46.753 77 39 2 4 79 43 118 6.48e-19 84.3
MS.gene55733.t1 MTR_5g488210 46.753 77 39 2 4 79 43 118 6.48e-19 84.3
MS.gene55733.t1 MTR_5g088640 46.753 77 39 2 4 79 43 118 6.57e-19 84.3
MS.gene55733.t1 MTR_5g082910 60.317 63 25 0 9 71 52 114 8.56e-19 84.3
MS.gene55733.t1 MTR_5g488170 46.753 77 39 2 4 79 43 118 1.01e-18 83.6
MS.gene55733.t1 MTR_3g110028 50.667 75 37 0 9 83 118 192 1.05e-18 86.3
MS.gene55733.t1 MTR_6g015455 55.882 68 30 0 9 76 38 105 1.07e-18 86.3
MS.gene55733.t1 MTR_3g101290 54.412 68 31 0 9 76 70 137 1.75e-18 82.4
MS.gene55733.t1 MTR_1g026870 49.333 75 38 0 9 83 118 192 5.85e-18 84.0
MS.gene55733.t1 MTR_7g450950 41.758 91 49 2 9 96 190 279 7.23e-18 82.4
MS.gene55733.t1 MTR_7g061550 37.500 96 60 0 3 98 37 132 3.46e-17 80.9
MS.gene55733.t1 MTR_6g027370 46.667 75 40 0 9 83 132 206 8.42e-17 79.7
MS.gene55733.t1 MTR_5g088610 46.154 78 37 2 4 80 40 113 8.44e-17 79.7
MS.gene55733.t1 MTR_3g089045 50.000 80 39 1 3 81 42 121 1.78e-16 78.2
MS.gene55733.t1 MTR_5g007300 72.093 43 12 0 7 49 98 140 3.29e-16 73.9
MS.gene55733.t1 MTR_7g037130 42.683 82 44 1 9 87 178 259 4.20e-16 77.8
MS.gene55733.t1 MTR_7g086960 37.255 102 64 0 9 110 122 223 6.62e-15 74.3
MS.gene55733.t1 MTR_4g063100 35.036 137 77 3 31 155 1 137 2.89e-14 70.1
MS.gene55733.t1 MTR_5g010650 48.387 62 32 0 9 70 143 204 3.35e-14 72.4
MS.gene55733.t1 MTR_6g055910 45.833 72 28 1 31 91 2 73 1.53e-13 68.6
MS.gene55733.t1 MTR_1g085880 48.148 81 40 2 4 83 43 122 1.60e-13 68.2
MS.gene55733.t1 MTR_1g085770 48.148 81 40 2 4 83 43 122 2.81e-13 68.9
MS.gene55733.t1 MTR_2g096380 53.226 62 28 1 31 91 1 62 3.47e-13 66.6
MS.gene55733.t1 MTR_5g038910 35.897 78 49 1 2 78 51 128 9.21e-13 68.2
MS.gene55733.t1 MTR_5g038910 35.897 78 49 1 2 78 51 128 1.36e-12 67.4
MS.gene55733.t1 MTR_8g468380 42.308 78 44 1 12 89 58 134 3.36e-12 66.6
MS.gene55733.t1 MTR_2g088730 53.704 54 18 1 31 84 34 80 4.13e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55733.t1 AT1G63910 41.325 317 102 15 7 250 46 351 4.30e-51 172
MS.gene55733.t1 AT5G12870 70.000 80 24 0 4 83 49 128 8.40e-37 132
MS.gene55733.t1 AT5G26660 73.973 73 19 0 7 79 15 87 5.06e-36 131
MS.gene55733.t1 AT3G13890 77.465 71 16 0 7 77 46 116 1.03e-35 131
MS.gene55733.t1 AT3G13890 77.465 71 16 0 7 77 55 125 1.30e-35 131
MS.gene55733.t1 AT4G01680 76.389 72 17 0 7 78 46 117 2.11e-35 127
MS.gene55733.t1 AT1G09540 70.000 80 24 0 7 86 46 125 2.31e-35 130
MS.gene55733.t1 AT5G26660 73.973 73 19 0 7 79 46 118 3.05e-35 130
MS.gene55733.t1 AT4G01680 76.389 72 17 0 7 78 46 117 5.73e-35 129
MS.gene55733.t1 AT4G01680 76.389 72 17 0 7 78 58 129 6.59e-35 129
MS.gene55733.t1 AT3G12720 73.239 71 19 0 7 77 56 126 2.31e-34 126
MS.gene55733.t1 AT5G10280 73.239 71 19 0 7 77 46 116 4.37e-34 126
MS.gene55733.t1 AT4G05100 69.737 76 23 0 4 79 44 119 5.22e-34 126
MS.gene55733.t1 AT3G01140 51.327 113 46 1 7 110 46 158 9.78e-34 125
MS.gene55733.t1 AT1G57560 71.233 73 21 0 7 79 46 118 9.84e-34 125
MS.gene55733.t1 AT1G57560 71.233 73 21 0 7 79 46 118 1.11e-33 124
MS.gene55733.t1 AT3G08500 48.800 125 57 1 4 121 61 185 1.44e-33 125
MS.gene55733.t1 AT1G22640 52.252 111 44 1 7 108 46 156 1.65e-33 123
MS.gene55733.t1 AT4G09460 69.333 75 23 0 7 81 46 120 2.16e-33 122
MS.gene55733.t1 AT3G61250 73.239 71 19 0 7 77 46 116 2.18e-33 124
MS.gene55733.t1 AT5G49330 61.111 90 35 0 7 96 46 135 3.16e-33 124
MS.gene55733.t1 AT3G01140 51.327 113 46 1 7 110 89 201 3.23e-33 125
MS.gene55733.t1 AT3G47600 62.500 88 33 0 7 94 40 127 3.34e-33 124
MS.gene55733.t1 AT4G21440 68.421 76 24 0 4 79 43 118 4.15e-33 124
MS.gene55733.t1 AT5G65230 70.423 71 21 0 7 77 46 116 4.59e-33 123
MS.gene55733.t1 AT3G02940 73.239 71 19 0 7 77 46 116 6.84e-33 122
MS.gene55733.t1 AT2G16720 73.239 71 19 0 7 77 46 116 9.24e-33 121
MS.gene55733.t1 AT3G47600 62.500 88 33 0 7 94 46 133 9.41e-33 123
MS.gene55733.t1 AT5G54230 68.421 76 24 0 4 79 43 118 1.09e-32 122
MS.gene55733.t1 AT1G66230 72.000 75 21 0 5 79 44 118 1.16e-32 121
MS.gene55733.t1 AT3G02940 73.239 71 19 0 7 77 46 116 1.19e-32 122
MS.gene55733.t1 AT3G02940 73.239 71 19 0 7 77 46 116 1.19e-32 122
MS.gene55733.t1 AT4G28110 67.105 76 25 0 4 79 43 118 1.57e-32 121
MS.gene55733.t1 AT1G18570 72.603 73 20 0 7 79 47 119 2.24e-32 122
MS.gene55733.t1 AT2G47460 62.921 89 29 1 4 88 43 131 2.75e-32 122
MS.gene55733.t1 AT4G34990 71.831 71 20 0 7 77 46 116 2.78e-32 120
MS.gene55733.t1 AT5G16600 70.667 75 22 0 5 79 44 118 5.89e-32 120
MS.gene55733.t1 AT4G17785 69.014 71 22 0 7 77 47 117 5.94e-32 121
MS.gene55733.t1 AT1G08810 55.446 101 39 1 4 98 43 143 6.42e-32 119
MS.gene55733.t1 AT4G38620 70.423 71 21 0 7 77 46 116 7.37e-32 119
MS.gene55733.t1 AT2G32460 68.000 75 24 0 4 78 49 123 8.12e-32 123
MS.gene55733.t1 AT5G40350 49.565 115 54 2 2 113 1 114 8.63e-32 116
MS.gene55733.t1 AT4G17785 69.014 71 22 0 7 77 47 117 8.66e-32 120
MS.gene55733.t1 AT1G06180 63.953 86 30 1 7 92 46 130 8.85e-32 118
MS.gene55733.t1 AT2G32460 68.000 75 24 0 4 78 37 111 9.84e-32 122
MS.gene55733.t1 AT1G35515 70.423 71 21 0 7 77 46 116 9.91e-32 117
MS.gene55733.t1 AT3G62610 59.783 92 35 1 4 95 43 132 1.04e-31 120
MS.gene55733.t1 AT5G16770 70.423 71 21 0 7 77 46 116 1.13e-31 120
MS.gene55733.t1 AT5G16770 70.423 71 21 0 7 77 46 116 1.13e-31 120
MS.gene55733.t1 AT5G60890 64.865 74 26 0 7 80 46 119 1.16e-31 119
MS.gene55733.t1 AT3G23250 60.241 83 33 0 7 89 46 128 1.25e-31 119
MS.gene55733.t1 AT1G74430 56.989 93 36 1 7 95 46 138 1.46e-31 118
MS.gene55733.t1 AT5G15310 68.493 73 23 0 7 79 46 118 1.48e-31 117
MS.gene55733.t1 AT2G31180 52.586 116 51 2 7 120 46 159 1.83e-31 117
MS.gene55733.t1 AT5G16770 70.423 71 21 0 7 77 46 116 1.83e-31 119
MS.gene55733.t1 AT5G16770 70.423 71 21 0 7 77 46 116 1.83e-31 119
MS.gene55733.t1 AT5G15310 68.493 73 23 0 7 79 46 118 2.01e-31 119
MS.gene55733.t1 AT5G15310 68.493 73 23 0 7 79 46 118 2.35e-31 119
MS.gene55733.t1 AT3G27810 54.839 93 36 1 7 99 5 91 2.89e-31 115
MS.gene55733.t1 AT1G34670 65.753 73 25 0 5 77 44 116 4.71e-31 119
MS.gene55733.t1 AT4G12350 67.123 73 24 0 7 79 46 118 5.03e-31 117
MS.gene55733.t1 AT4G26930 67.123 73 24 0 7 79 53 125 5.03e-31 119
MS.gene55733.t1 AT3G01530 49.219 128 54 3 5 129 57 176 6.43e-31 115
MS.gene55733.t1 AT5G40350 50.000 110 51 2 7 113 51 159 8.67e-31 114
MS.gene55733.t1 AT4G22680 68.493 73 23 0 7 79 46 118 1.10e-30 115
MS.gene55733.t1 AT3G27810 54.839 93 36 1 7 99 54 140 1.13e-30 114
MS.gene55733.t1 AT5G56110 64.865 74 26 0 4 77 43 116 1.61e-30 116
MS.gene55733.t1 AT2G26960 50.442 113 53 1 4 116 51 160 1.81e-30 118
MS.gene55733.t1 AT5G14340 43.382 136 75 1 7 142 58 191 1.91e-30 115
MS.gene55733.t1 AT5G55020 63.158 76 28 0 4 79 57 132 2.43e-30 119
MS.gene55733.t1 AT5G62470 59.302 86 35 0 7 92 46 131 2.76e-30 116
MS.gene55733.t1 AT1G18710 65.753 73 25 0 7 79 46 118 3.32e-30 114
MS.gene55733.t1 AT1G68320 63.750 80 29 0 7 86 53 132 3.90e-30 115
MS.gene55733.t1 AT5G35550 46.341 123 61 1 7 124 51 173 4.20e-30 114
MS.gene55733.t1 AT5G62320 61.250 80 31 0 7 86 54 133 4.64e-30 114
MS.gene55733.t1 AT1G79180 50.000 104 52 0 5 108 46 149 4.79e-30 115
MS.gene55733.t1 AT1G79180 49.524 105 53 0 4 108 78 182 5.18e-30 115
MS.gene55733.t1 AT3G13540 62.667 75 28 0 7 81 57 131 9.35e-30 113
MS.gene55733.t1 AT5G35550 46.341 123 61 1 7 124 48 170 1.12e-29 113
MS.gene55733.t1 AT5G06100 65.278 72 25 0 7 78 66 137 1.29e-29 116
MS.gene55733.t1 AT5G62470 59.524 84 34 0 9 92 47 130 1.61e-29 114
MS.gene55733.t1 AT5G07700 64.789 71 25 0 7 77 46 116 1.88e-29 114
MS.gene55733.t1 AT5G07700 64.789 71 25 0 7 77 46 116 1.88e-29 114
MS.gene55733.t1 AT3G28910 65.789 76 26 0 4 79 43 118 2.17e-29 114
MS.gene55733.t1 AT5G61420 64.789 71 25 0 7 77 46 116 2.22e-29 114
MS.gene55733.t1 AT3G24310 57.471 87 37 0 7 93 52 138 2.31e-29 112
MS.gene55733.t1 AT1G74650 67.568 74 24 0 4 77 43 116 2.35e-29 114
MS.gene55733.t1 AT3G27920 58.537 82 34 0 7 88 48 129 2.53e-29 111
MS.gene55733.t1 AT5G14750 63.380 71 26 0 7 77 50 120 2.58e-29 110
MS.gene55733.t1 AT5G06100 65.278 72 25 0 7 78 66 137 2.63e-29 116
MS.gene55733.t1 AT5G06100 65.278 72 25 0 7 78 66 137 2.63e-29 116
MS.gene55733.t1 AT5G06100 65.278 72 25 0 7 78 66 137 2.63e-29 116
MS.gene55733.t1 AT5G06100 65.278 72 25 0 7 78 66 137 2.63e-29 116
MS.gene55733.t1 AT5G07690 68.116 69 22 0 7 75 46 114 2.66e-29 114
MS.gene55733.t1 AT1G16490 66.197 71 24 0 7 77 48 118 2.76e-29 112
MS.gene55733.t1 AT3G11440 62.500 72 27 0 7 78 75 146 4.02e-29 115
MS.gene55733.t1 AT1G25340 59.756 82 33 0 5 86 50 131 4.40e-29 112
MS.gene55733.t1 AT5G14750 50.575 87 43 0 9 95 18 104 4.91e-29 108
MS.gene55733.t1 AT5G23000 58.667 75 31 0 3 77 43 117 6.43e-29 112
MS.gene55733.t1 AT2G47190 43.182 132 68 1 4 135 51 175 8.00e-29 111
MS.gene55733.t1 AT3G11440 62.500 72 27 0 7 78 75 146 9.03e-29 115
MS.gene55733.t1 AT3G11440 62.500 72 27 0 7 78 75 146 9.03e-29 115
MS.gene55733.t1 AT3G11440 62.500 72 27 0 7 78 75 146 9.03e-29 115
MS.gene55733.t1 AT1G56160 66.197 71 24 0 7 77 48 118 1.11e-28 111
MS.gene55733.t1 AT5G40330 63.380 71 26 0 7 77 46 116 1.27e-28 109
MS.gene55733.t1 AT3G12820 66.197 71 24 0 9 79 2 72 1.51e-28 108
MS.gene55733.t1 AT3G12820 65.753 73 25 0 7 79 48 120 2.76e-28 108
MS.gene55733.t1 AT1G74080 65.753 73 25 0 7 79 46 118 3.27e-28 110
MS.gene55733.t1 AT5G57620 61.972 71 27 0 7 77 47 117 3.66e-28 110
MS.gene55733.t1 AT3G49690 63.380 71 26 0 7 77 47 117 3.74e-28 110
MS.gene55733.t1 AT5G52260 55.435 92 41 0 3 94 42 133 4.87e-28 108
MS.gene55733.t1 AT2G36890 64.789 71 25 0 7 77 47 117 7.15e-28 109
MS.gene55733.t1 AT5G52600 54.348 92 35 1 5 96 44 128 1.00e-27 106
MS.gene55733.t1 AT2G36890 64.789 71 25 0 7 77 88 158 1.04e-27 109
MS.gene55733.t1 AT4G37780 61.972 71 27 0 7 77 47 117 1.13e-27 108
MS.gene55733.t1 AT3G48920 49.474 95 46 1 3 95 48 142 1.21e-27 107
MS.gene55733.t1 AT4G13480 58.621 87 29 1 7 93 40 119 1.63e-27 107
MS.gene55733.t1 AT1G25340 60.526 76 30 0 11 86 51 126 2.90e-27 107
MS.gene55733.t1 AT5G59780 60.274 73 29 0 7 79 21 93 3.00e-27 105
MS.gene55733.t1 AT5G59780 60.000 75 30 0 5 79 40 114 3.60e-27 105
MS.gene55733.t1 AT3G30210 54.545 88 39 1 7 94 61 147 3.77e-27 107
MS.gene55733.t1 AT3G46130 60.000 75 30 0 5 79 9 83 4.15e-27 105
MS.gene55733.t1 AT4G25560 60.000 80 32 0 3 82 40 119 4.41e-27 106
MS.gene55733.t1 AT1G25340 60.526 76 30 0 11 86 51 126 4.87e-27 107
MS.gene55733.t1 AT5G65790 60.563 71 28 0 7 77 47 117 5.97e-27 108
MS.gene55733.t1 AT3G46130 62.857 70 26 0 7 76 21 90 8.88e-27 104
MS.gene55733.t1 AT3G46130 60.000 75 30 0 5 79 41 115 9.49e-27 105
MS.gene55733.t1 AT1G48000 60.000 80 32 0 7 86 66 145 1.66e-26 104
MS.gene55733.t1 AT1G66370 47.778 90 47 0 3 92 38 127 1.26e-25 102
MS.gene55733.t1 AT3G53200 56.579 76 33 0 1 76 37 112 6.32e-25 100
MS.gene55733.t1 AT3G53200 55.263 76 34 0 1 76 4 79 9.64e-25 98.6
MS.gene55733.t1 AT3G28470 61.538 65 25 0 7 71 46 110 2.74e-24 100
MS.gene55733.t1 AT3G06490 61.250 80 31 0 7 86 53 132 3.00e-24 100
MS.gene55733.t1 AT1G22640 46.465 99 44 1 19 108 1 99 1.11e-23 95.9
MS.gene55733.t1 AT3G60460 57.534 73 30 1 7 78 45 117 2.21e-23 97.1
MS.gene55733.t1 AT5G49620 57.317 82 35 0 5 86 58 139 2.28e-23 97.4
MS.gene55733.t1 AT3G23250 54.930 71 32 0 19 89 1 71 1.36e-22 93.6
MS.gene55733.t1 AT1G66380 60.000 70 28 0 7 76 9 78 6.10e-22 88.2
MS.gene55733.t1 AT1G66380 56.757 74 32 0 3 76 38 111 1.77e-21 88.2
MS.gene55733.t1 AT1G71030 39.604 101 56 1 12 107 5 105 3.07e-21 88.6
MS.gene55733.t1 AT1G71030 39.604 101 56 1 12 107 19 119 3.78e-21 89.0
MS.gene55733.t1 AT5G11050 37.795 127 71 3 2 120 130 256 6.74e-21 92.0
MS.gene55733.t1 AT1G66390 56.757 74 32 0 3 76 38 111 7.70e-21 89.4
MS.gene55733.t1 AT1G26780 50.602 83 40 1 2 83 123 205 7.91e-21 91.3
MS.gene55733.t1 AT1G26780 50.602 83 40 1 2 83 123 205 8.74e-21 89.7
MS.gene55733.t1 AT1G69560 50.602 83 40 1 2 83 132 214 8.98e-21 90.5
MS.gene55733.t1 AT5G58850 44.086 93 49 2 1 90 129 221 1.09e-20 91.3
MS.gene55733.t1 AT1G69560 50.602 83 40 1 2 83 148 230 1.20e-20 90.5
MS.gene55733.t1 AT1G56650 55.405 74 33 0 3 76 38 111 1.45e-20 88.6
MS.gene55733.t1 AT2G26950 55.932 59 26 0 13 71 56 114 1.55e-20 90.5
MS.gene55733.t1 AT3G55730 44.898 98 54 0 9 106 89 186 1.72e-20 90.5
MS.gene55733.t1 AT2G25230 37.255 102 64 0 9 110 59 160 2.39e-20 87.8
MS.gene55733.t1 AT3G09230 43.434 99 53 1 9 107 88 183 4.65e-20 89.4
MS.gene55733.t1 AT5G14750 57.627 59 25 0 19 77 1 59 6.85e-20 84.0
MS.gene55733.t1 AT5G14750 57.627 59 25 0 19 77 1 59 6.85e-20 84.0
MS.gene55733.t1 AT5G49620 48.958 96 35 1 5 86 58 153 8.68e-20 87.8
MS.gene55733.t1 AT4G18770 40.909 88 52 0 9 96 250 337 1.61e-19 88.2
MS.gene55733.t1 AT5G40360 34.746 118 73 2 9 122 191 308 2.43e-19 87.0
MS.gene55733.t1 AT2G39880 55.882 68 30 0 9 76 83 150 3.17e-19 86.7
MS.gene55733.t1 AT4G33450 45.455 88 48 0 9 96 52 139 6.42e-19 84.0
MS.gene55733.t1 AT3G27785 52.500 80 34 2 3 81 215 291 6.54e-19 86.3
MS.gene55733.t1 AT5G02320 50.649 77 38 0 9 85 160 236 1.16e-18 85.9
MS.gene55733.t1 AT5G02320 50.649 77 38 0 9 85 160 236 1.16e-18 85.9
MS.gene55733.t1 AT5G02320 50.649 77 38 0 9 85 100 176 1.34e-18 85.5
MS.gene55733.t1 AT3G29020 48.000 75 39 0 9 83 98 172 2.15e-18 82.4
MS.gene55733.t1 AT3G29020 48.000 75 39 0 9 83 100 174 2.33e-18 83.6
MS.gene55733.t1 AT5G11510 50.667 75 37 0 9 83 114 188 2.62e-18 85.1
MS.gene55733.t1 AT5G11510 50.667 75 37 0 9 83 114 188 2.62e-18 85.1
MS.gene55733.t1 AT5G11510 50.667 75 37 0 9 83 114 188 2.62e-18 85.1
MS.gene55733.t1 AT5G11510 50.667 75 37 0 9 83 114 188 3.35e-18 84.7
MS.gene55733.t1 AT5G11510 50.667 75 37 0 9 83 114 188 3.45e-18 84.7
MS.gene55733.t1 AT3G50060 51.471 68 33 0 9 76 39 106 5.33e-18 82.4
MS.gene55733.t1 AT3G09370 55.882 68 30 0 9 76 168 235 6.50e-18 83.6
MS.gene55733.t1 AT3G09370 51.316 76 37 0 1 76 155 230 6.95e-18 83.6
MS.gene55733.t1 AT2G23290 55.882 68 30 0 9 76 46 113 7.79e-18 82.0
MS.gene55733.t1 AT1G17950 48.649 74 38 0 9 82 38 111 7.98e-18 81.3
MS.gene55733.t1 AT3G09370 55.882 68 30 0 9 76 176 243 8.82e-18 83.2
MS.gene55733.t1 AT1G18960 46.479 71 36 1 7 77 41 109 1.46e-17 81.3
MS.gene55733.t1 AT4G32730 48.000 75 39 0 9 83 120 194 1.57e-17 82.8
MS.gene55733.t1 AT4G32730 48.000 75 39 0 9 83 120 194 1.57e-17 82.8
MS.gene55733.t1 AT4G32730 48.000 75 39 0 9 83 120 194 1.57e-17 82.8
MS.gene55733.t1 AT4G32730 48.000 75 39 0 9 83 120 194 1.57e-17 82.8
MS.gene55733.t1 AT4G32730 48.000 75 39 0 9 83 120 194 1.88e-17 82.4
MS.gene55733.t1 AT4G37260 52.941 68 32 0 9 76 46 113 2.35e-17 80.9
MS.gene55733.t1 AT5G17800 44.304 79 44 0 1 79 118 196 3.95e-17 80.1
MS.gene55733.t1 AT5G67300 51.471 68 33 0 9 76 39 106 1.52e-16 78.6
MS.gene55733.t1 AT5G40430 32.979 94 63 0 9 102 86 179 4.06e-16 76.6
MS.gene55733.t1 AT1G73410 49.315 73 37 0 9 81 39 111 8.67e-16 75.5
MS.gene55733.t1 AT1G73410 48.649 74 38 0 9 82 39 112 2.06e-15 73.6
MS.gene55733.t1 AT5G39700 39.759 83 50 0 9 91 89 171 1.34e-14 70.9
MS.gene55733.t1 AT2G37630 39.506 81 49 0 3 83 34 114 1.77e-14 73.2
MS.gene55733.t1 AT4G00540 45.946 74 40 0 9 82 139 212 2.06e-14 73.2
MS.gene55733.t1 AT1G14350 35.955 89 56 1 2 89 50 138 2.70e-14 72.8
MS.gene55733.t1 AT1G14350 35.955 89 56 1 2 89 50 138 2.70e-14 72.8
MS.gene55733.t1 AT4G00540 45.946 74 40 0 9 82 137 210 2.76e-14 72.8
MS.gene55733.t1 AT5G59780 57.143 49 21 0 31 79 1 49 1.43e-13 67.8
MS.gene55733.t1 AT3G46130 57.143 49 21 0 31 79 1 49 3.73e-13 67.0
MS.gene55733.t1 AT2G02820 38.571 70 43 0 9 78 63 132 7.88e-13 68.6
MS.gene55733.t1 AT2G02820 38.571 70 43 0 9 78 63 132 8.22e-13 68.6
MS.gene55733.t1 AT2G02820 40.299 67 40 0 12 78 66 132 1.30e-12 67.4
MS.gene55733.t1 AT4G25560 56.863 51 22 0 32 82 3 53 1.32e-12 65.9
MS.gene55733.t1 AT1G14350 38.356 73 45 0 17 89 23 95 2.35e-12 67.0
MS.gene55733.t1 AT1G14350 38.356 73 45 0 17 89 23 95 2.35e-12 67.0
MS.gene55733.t1 AT3G28910 61.905 42 16 0 38 79 1 42 1.17e-11 63.9
MS.gene55733.t1 AT1G74650 65.000 40 14 0 38 77 1 40 1.46e-11 63.5

Find 60 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACCAAATTCATCAAATA+TGG 0.189419 4.3:+5480543 MS.gene55733:CDS
GGAGAAAACAAGGTTGTTTC+TGG 0.256153 4.3:-5480157 None:intergenic
TATTCTCTTGGTTGGAAAAC+TGG 0.273736 4.3:-5480117 None:intergenic
GTTCCCATATTTGATGAATT+TGG 0.278649 4.3:-5480547 None:intergenic
TCCCAGAAAAGAAAGTTATT+AGG 0.327528 4.3:-5480478 None:intergenic
ACAATGAAATAAAGAATTAC+TGG 0.332830 4.3:+5479972 MS.gene55733:CDS
TAAAGAATTACTGGAATTCA+TGG 0.339337 4.3:+5479981 MS.gene55733:CDS
GAGCCCGGTGATTCATTTCA+TGG 0.344990 4.3:+5480202 MS.gene55733:CDS
TTGCTGTTGTTATATTCTCT+TGG 0.350771 4.3:-5480129 None:intergenic
AACCTTCCTCTTCTAATATC+AGG 0.353809 4.3:-5478858 None:intergenic
TTGGAGGAGGTAGTGATGAT+TGG 0.377550 4.3:-5480315 None:intergenic
TTCACAGTGTTGTTGGCAAC+AGG 0.382667 4.3:+5478913 MS.gene55733:CDS
TTCTGGGACAATATTGTTCA+AGG 0.397659 4.3:+5480493 MS.gene55733:CDS
ATTAGCCTTCACAGTGTTGT+TGG 0.407577 4.3:+5478906 MS.gene55733:CDS
ATAATTAACTTCTCCTCATC+AGG 0.409106 4.3:-5478885 None:intergenic
TTATACCGTTTATAGAATCT+TGG 0.426214 4.3:-5480270 None:intergenic
TACTTCCAAGATTCTATAAA+CGG 0.434921 4.3:+5480265 MS.gene55733:CDS
TAGAATGCTTGCAGAGTCAA+TGG 0.439026 4.3:+5480434 MS.gene55733:CDS
ATTGTTCAAGGGCATGGACT+TGG 0.450777 4.3:+5480505 MS.gene55733:CDS
AATAATTTATCCATCTCAAT+CGG 0.463684 4.3:-5478830 None:intergenic
TGTTGTTATATTCTCTTGGT+TGG 0.473413 4.3:-5480125 None:intergenic
CCACCAAATTCATCAAATAT+GGG 0.474503 4.3:+5480544 MS.gene55733:CDS
GTTCAAGGGCATGGACTTGG+TGG 0.480608 4.3:+5480508 MS.gene55733:CDS
CTAAAAGAAGAAGAAGGAAA+AGG 0.490998 4.3:-5480589 None:intergenic
ATTAGAATTATAATTGAGGT+GGG 0.501076 4.3:-5480083 None:intergenic
TTCAAGGGCATGGACTTGGT+GGG 0.505959 4.3:+5480509 MS.gene55733:CDS
GACAATATTGTTCAAGGGCA+TGG 0.513323 4.3:+5480499 MS.gene55733:CDS
TTATATTAGAATTATAATTG+AGG 0.523372 4.3:-5480087 None:intergenic
AAAGTTGTTGATATTGGAGG+AGG 0.535605 4.3:-5480328 None:intergenic
TATTAGAATTATAATTGAGG+TGG 0.537844 4.3:-5480084 None:intergenic
GAAAACAAGGTTGTTTCTGG+TGG 0.547757 4.3:-5480154 None:intergenic
TTAAGACCTGATATTAGAAG+AGG 0.550895 4.3:+5478852 MS.gene55733:CDS
AACATAAACAAAGGGCATGT+GGG 0.552285 4.3:-5480178 None:intergenic
ATTTCATTGTCAGTTCTACC+AGG 0.553828 4.3:-5479959 None:intergenic
CGGGCTCAAACATAAACAAA+GGG 0.554670 4.3:-5480186 None:intergenic
AAACATAAACAAAGGGCATG+TGG 0.559335 4.3:-5480179 None:intergenic
TGTTCCATGAAATGAATCAC+CGG 0.561446 4.3:-5480206 None:intergenic
TCAAGGGCATGGACTTGGTG+GGG 0.562532 4.3:+5480510 MS.gene55733:CDS
CCCATATTTGATGAATTTGG+TGG 0.563290 4.3:-5480544 None:intergenic
CACATTGCAAGTCACTTACC+TGG 0.565343 4.3:+5479941 MS.gene55733:CDS
AGAATCTTGGAAGTATTGAT+CGG 0.567267 4.3:-5480257 None:intergenic
ACGGTATAAGCTCTGAAACA+TGG 0.571232 4.3:+5480284 MS.gene55733:CDS
TCTGGGACAATATTGTTCAA+GGG 0.578297 4.3:+5480494 MS.gene55733:CDS
TTATCTCTAAAAGAAGAAGA+AGG 0.581455 4.3:-5480595 None:intergenic
ACCACCTTTGATAGAGAATG+TGG 0.583136 4.3:+5480375 MS.gene55733:CDS
CCTTTGTTTATGTTTGAGCC+CGG 0.594664 4.3:+5480187 MS.gene55733:CDS
TCCACATTCTCTATCAAAGG+TGG 0.596829 4.3:-5480376 None:intergenic
TAATCAGGGCTTCAAAGATG+TGG 0.602301 4.3:+5478798 MS.gene55733:intron
AGAATGCTTGCAGAGTCAAT+GGG 0.603509 4.3:+5480435 MS.gene55733:CDS
AGGGCATGTGGGAGAAAACA+AGG 0.610416 4.3:-5480167 None:intergenic
GTAAGAGTTGCCGATTGAGA+TGG 0.611865 4.3:+5478820 MS.gene55733:CDS
GTGGAAAACATGGACGAGGA+AGG 0.617283 4.3:+5480394 MS.gene55733:CDS
CCGGGCTCAAACATAAACAA+AGG 0.617355 4.3:-5480187 None:intergenic
GACGAGGAAGGAGATCATAG+AGG 0.622748 4.3:+5480406 MS.gene55733:CDS
AGGAAGGTTTACACCTGATG+AGG 0.633114 4.3:+5478872 MS.gene55733:CDS
GATAGAGAATGTGGAAAACA+TGG 0.635293 4.3:+5480384 MS.gene55733:CDS
GTTCCATGAAATGAATCACC+GGG 0.637744 4.3:-5480205 None:intergenic
TGTTGCCAACAACACTGTGA+AGG 0.638450 4.3:-5478911 None:intergenic
GACCTGATATTAGAAGAGGA+AGG 0.643800 4.3:+5478856 MS.gene55733:CDS
GAATGTGGAAAACATGGACG+AGG 0.646679 4.3:+5480390 MS.gene55733:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTAGAATTATAATTG+AGG - chr4.3:5480090-5480109 None:intergenic 10.0%
!! AATGAATACAATAAAGAAAA+TGG - chr4.3:5479052-5479071 None:intergenic 15.0%
!! ACATAATTGATATAATAGAA+GGG - chr4.3:5478741-5478760 None:intergenic 15.0%
!! TAAATATAAATCAGATCATT+TGG + chr4.3:5479317-5479336 MS.gene55733:intron 15.0%
!!! AGAAACAAAATTTTAATTGT+TGG - chr4.3:5478774-5478793 None:intergenic 15.0%
!!! ATTTTGTTTCTTAAATAATC+AGG + chr4.3:5478783-5478802 MS.gene55733:intron 15.0%
!!! TTTTGTTTCTTAAATAATCA+GGG + chr4.3:5478784-5478803 MS.gene55733:intron 15.0%
!! AATAATTTATCCATCTCAAT+CGG - chr4.3:5478833-5478852 None:intergenic 20.0%
!! ACAATGAAATAAAGAATTAC+TGG + chr4.3:5479972-5479991 MS.gene55733:CDS 20.0%
!! ACATTAAGCATATATATGTT+TGG - chr4.3:5479283-5479302 None:intergenic 20.0%
!! ATTAGAATTATAATTGAGGT+GGG - chr4.3:5480086-5480105 None:intergenic 20.0%
!! ATTGAAAAAGTTGTTGATAT+TGG - chr4.3:5480337-5480356 None:intergenic 20.0%
!! CACATAATTGATATAATAGA+AGG - chr4.3:5478742-5478761 None:intergenic 20.0%
!! CATAATTGATATAATAGAAG+GGG - chr4.3:5478740-5478759 None:intergenic 20.0%
!! TATTAGAATTATAATTGAGG+TGG - chr4.3:5480087-5480106 None:intergenic 20.0%
!!! AATATCAACAACTTTTTCAA+TGG + chr4.3:5480336-5480355 MS.gene55733:CDS 20.0%
!!! AGTAAAAAATGAAAGTCTTT+TGG + chr4.3:5479797-5479816 MS.gene55733:intron 20.0%
!!! ATTTTGTGTAACATTATTAG+TGG - chr4.3:5480050-5480069 None:intergenic 20.0%
!!! CAATTTTGTATTAATCAACA+CGG + chr4.3:5479255-5479274 MS.gene55733:intron 20.0%
! AAATCAGATCATTTGGTATT+TGG + chr4.3:5479324-5479343 MS.gene55733:intron 25.0%
! GAGTTAAGTGAGTTAAATTA+AGG + chr4.3:5479466-5479485 MS.gene55733:intron 25.0%
! GTTAAATTAAGGCTATATGA+AGG + chr4.3:5479477-5479496 MS.gene55733:intron 25.0%
! TAAAGAATTACTGGAATTCA+TGG + chr4.3:5479981-5480000 MS.gene55733:CDS 25.0%
! TAACACATAATAACTCACAT+CGG + chr4.3:5479823-5479842 MS.gene55733:intron 25.0%
! TACTTCCAAGATTCTATAAA+CGG + chr4.3:5480265-5480284 MS.gene55733:CDS 25.0%
! TAGACATGTAATTAAGCAAT+AGG + chr4.3:5479534-5479553 MS.gene55733:intron 25.0%
! TATCAGGGCTTATATAAATA+TGG + chr4.3:5479681-5479700 MS.gene55733:intron 25.0%
! TCAAAATCAAGAGCTATAAT+AGG - chr4.3:5478977-5478996 None:intergenic 25.0%
! TTATACCGTTTATAGAATCT+TGG - chr4.3:5480273-5480292 None:intergenic 25.0%
! TTGAACAAGAATCTTTAATG+AGG + chr4.3:5479074-5479093 MS.gene55733:intron 25.0%
!! TCCTAATAACTTTCTTTTCT+GGG + chr4.3:5480477-5480496 MS.gene55733:CDS 25.0%
!! TTATCTCTAAAAGAAGAAGA+AGG - chr4.3:5480598-5480617 None:intergenic 25.0%
!!! AGACTTTCATTTTTTACTAG+TGG - chr4.3:5479795-5479814 None:intergenic 25.0%
AAAATGGAAGCAAGCAATAA+GGG - chr4.3:5479036-5479055 None:intergenic 30.0%
AAATCAAGAGCTATAATAGG+AGG - chr4.3:5478974-5478993 None:intergenic 30.0%
AACACATAATAACTCACATC+GGG + chr4.3:5479824-5479843 MS.gene55733:intron 30.0%
AACCAATATCATGTGAATTC+CGG - chr4.3:5479747-5479766 None:intergenic 30.0%
AACCTAATCTCTTAGTAATG+AGG - chr4.3:5479661-5479680 None:intergenic 30.0%
ACCACCAAATTCATCAAATA+TGG + chr4.3:5480543-5480562 MS.gene55733:CDS 30.0%
ACTAAGAGATTAGGTTTATC+AGG + chr4.3:5479665-5479684 MS.gene55733:intron 30.0%
ATAATTAACTTCTCCTCATC+AGG - chr4.3:5478888-5478907 None:intergenic 30.0%
CCACCAAATTCATCAAATAT+GGG + chr4.3:5480544-5480563 MS.gene55733:CDS 30.0%
CTAAAAGAAGAAGAAGGAAA+AGG - chr4.3:5480592-5480611 None:intergenic 30.0%
CTAAGAGATTAGGTTTATCA+GGG + chr4.3:5479666-5479685 MS.gene55733:intron 30.0%
GAAAAAGTTGTTGATATTGG+AGG - chr4.3:5480334-5480353 None:intergenic 30.0%
GTTCCCATATTTGATGAATT+TGG - chr4.3:5480550-5480569 None:intergenic 30.0%
TCCCAGAAAAGAAAGTTATT+AGG - chr4.3:5480481-5480500 None:intergenic 30.0%
TGTTGTTATATTCTCTTGGT+TGG - chr4.3:5480128-5480147 None:intergenic 30.0%
TTAAGACCTGATATTAGAAG+AGG + chr4.3:5478852-5478871 MS.gene55733:CDS 30.0%
! ACATGTCTAAAACAGAAGTT+TGG - chr4.3:5479523-5479542 None:intergenic 30.0%
! GTCCTAATAACTTTCTTTTC+TGG + chr4.3:5480476-5480495 MS.gene55733:CDS 30.0%
! TTGCTGTTGTTATATTCTCT+TGG - chr4.3:5480132-5480151 None:intergenic 30.0%
! TTTTCCACATTCTCTATCAA+AGG - chr4.3:5480382-5480401 None:intergenic 30.0%
!! AGAATCTTGGAAGTATTGAT+CGG - chr4.3:5480260-5480279 None:intergenic 30.0%
AAAGTTGTTGATATTGGAGG+AGG - chr4.3:5480331-5480350 None:intergenic 35.0%
AACCTTCCTCTTCTAATATC+AGG - chr4.3:5478861-5478880 None:intergenic 35.0%
AAGCTTCATATTGTAGCTTC+AGG - chr4.3:5479211-5479230 None:intergenic 35.0%
ATTTCATTGTCAGTTCTACC+AGG - chr4.3:5479962-5479981 None:intergenic 35.0%
ATTTGGGAATGAAATGCAGA+TGG + chr4.3:5479915-5479934 MS.gene55733:intron 35.0%
CACCTCATTACTAAGAGATT+AGG + chr4.3:5479656-5479675 MS.gene55733:intron 35.0%
CCCATATTTGATGAATTTGG+TGG - chr4.3:5480547-5480566 None:intergenic 35.0%
GAAAATGGAAGCAAGCAATA+AGG - chr4.3:5479037-5479056 None:intergenic 35.0%
GATAGAGAATGTGGAAAACA+TGG + chr4.3:5480384-5480403 MS.gene55733:CDS 35.0%
GTTTGGATTTGGATTCGATT+TGG + chr4.3:5479143-5479162 MS.gene55733:intron 35.0%
TATTCTCTTGGTTGGAAAAC+TGG - chr4.3:5480120-5480139 None:intergenic 35.0%
TCTCGTCAATGATAAACGAT+TGG + chr4.3:5479366-5479385 MS.gene55733:intron 35.0%
TGTTCCATGAAATGAATCAC+CGG - chr4.3:5480209-5480228 None:intergenic 35.0%
TTTGGGAATGAAATGCAGAT+GGG + chr4.3:5479916-5479935 MS.gene55733:intron 35.0%
! AAACATAAACAAAGGGCATG+TGG - chr4.3:5480182-5480201 None:intergenic 35.0%
! AACATAAACAAAGGGCATGT+GGG - chr4.3:5480181-5480200 None:intergenic 35.0%
! TCTGGGACAATATTGTTCAA+GGG + chr4.3:5480494-5480513 MS.gene55733:CDS 35.0%
!! TTCTGGGACAATATTGTTCA+AGG + chr4.3:5480493-5480512 MS.gene55733:CDS 35.0%
AACACATGCTAACCAATGGT+AGG - chr4.3:5479126-5479145 None:intergenic 40.0%
AACCAATGGTAGGTCTAGTT+AGG - chr4.3:5479116-5479135 None:intergenic 40.0%
AAGGTGAGGCTATAGGAATT+AGG - chr4.3:5479604-5479623 None:intergenic 40.0%
ACCAATGGTAGGTCTAGTTA+GGG - chr4.3:5479115-5479134 None:intergenic 40.0%
ACCACCTTTGATAGAGAATG+TGG + chr4.3:5480375-5480394 MS.gene55733:CDS 40.0%
AGAATGCTTGCAGAGTCAAT+GGG + chr4.3:5480435-5480454 MS.gene55733:CDS 40.0%
ATGTGAATTCCGGACAATCT+CGG - chr4.3:5479737-5479756 None:intergenic 40.0%
CGGGCTCAAACATAAACAAA+GGG - chr4.3:5480189-5480208 None:intergenic 40.0%
GACAATATTGTTCAAGGGCA+TGG + chr4.3:5480499-5480518 MS.gene55733:CDS 40.0%
GACCTGATATTAGAAGAGGA+AGG + chr4.3:5478856-5478875 MS.gene55733:CDS 40.0%
GGTTAGCATGTGTTTGGATT+TGG + chr4.3:5479132-5479151 MS.gene55733:intron 40.0%
GTCCGGAATTCACATGATAT+TGG + chr4.3:5479742-5479761 MS.gene55733:intron 40.0%
GTTCCATGAAATGAATCACC+GGG - chr4.3:5480208-5480227 None:intergenic 40.0%
TAATCAGGGCTTCAAAGATG+TGG + chr4.3:5478798-5478817 MS.gene55733:intron 40.0%
TAGAATGCTTGCAGAGTCAA+TGG + chr4.3:5480434-5480453 MS.gene55733:CDS 40.0%
TCCAAACACATGCTAACCAA+TGG - chr4.3:5479130-5479149 None:intergenic 40.0%
TCCACATTCTCTATCAAAGG+TGG - chr4.3:5480379-5480398 None:intergenic 40.0%
! AATCTCGGGACGATTTCTTT+TGG - chr4.3:5479722-5479741 None:intergenic 40.0%
! ACCATTGGTTAGCATGTGTT+TGG + chr4.3:5479126-5479145 MS.gene55733:intron 40.0%
! ATCTCGGGACGATTTCTTTT+GGG - chr4.3:5479721-5479740 None:intergenic 40.0%
! CCTTTGTTTATGTTTGAGCC+CGG + chr4.3:5480187-5480206 MS.gene55733:CDS 40.0%
! GGAGAAAACAAGGTTGTTTC+TGG - chr4.3:5480160-5480179 None:intergenic 40.0%
!! ACGGTATAAGCTCTGAAACA+TGG + chr4.3:5480284-5480303 MS.gene55733:CDS 40.0%
!! ATTAGCCTTCACAGTGTTGT+TGG + chr4.3:5478906-5478925 MS.gene55733:CDS 40.0%
!! GAAAACAAGGTTGTTTCTGG+TGG - chr4.3:5480157-5480176 None:intergenic 40.0%
AGGAAGGTTTACACCTGATG+AGG + chr4.3:5478872-5478891 MS.gene55733:CDS 45.0%
CACATTGCAAGTCACTTACC+TGG + chr4.3:5479941-5479960 MS.gene55733:CDS 45.0%
CCGGGCTCAAACATAAACAA+AGG - chr4.3:5480190-5480209 None:intergenic 45.0%
GAATGTGGAAAACATGGACG+AGG + chr4.3:5480390-5480409 MS.gene55733:CDS 45.0%
TCCCTAACTAGACCTACCAT+TGG + chr4.3:5479111-5479130 MS.gene55733:intron 45.0%
TGTGAATTCCGGACAATCTC+GGG - chr4.3:5479736-5479755 None:intergenic 45.0%
TGTTGCCAACAACACTGTGA+AGG - chr4.3:5478914-5478933 None:intergenic 45.0%
TTGGAGGAGGTAGTGATGAT+TGG - chr4.3:5480318-5480337 None:intergenic 45.0%
! ATTGTTCAAGGGCATGGACT+TGG + chr4.3:5480505-5480524 MS.gene55733:CDS 45.0%
! GTAAGAGTTGCCGATTGAGA+TGG + chr4.3:5478820-5478839 MS.gene55733:CDS 45.0%
! TTCACAGTGTTGTTGGCAAC+AGG + chr4.3:5478913-5478932 MS.gene55733:CDS 45.0%
!!! ATATTTTATTTATTGAATTT+GGG + chr4.3:5479899-5479918 MS.gene55733:intron 5.0%
!!! TATATTTTATTTATTGAATT+TGG + chr4.3:5479898-5479917 MS.gene55733:intron 5.0%
AGGGCATGTGGGAGAAAACA+AGG - chr4.3:5480170-5480189 None:intergenic 50.0%
GAAATCGTCCCGAGATTGTC+CGG + chr4.3:5479725-5479744 MS.gene55733:intron 50.0%
GACGAGGAAGGAGATCATAG+AGG + chr4.3:5480406-5480425 MS.gene55733:CDS 50.0%
GAGCCCGGTGATTCATTTCA+TGG + chr4.3:5480202-5480221 MS.gene55733:CDS 50.0%
GGTAGGTCTAGTTAGGGACT+TGG - chr4.3:5479109-5479128 None:intergenic 50.0%
GTGGAAAACATGGACGAGGA+AGG + chr4.3:5480394-5480413 MS.gene55733:CDS 50.0%
GTGTGTGAAGGTGAGGCTAT+AGG - chr4.3:5479611-5479630 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGA+AGG - chr4.3:5479623-5479642 None:intergenic 50.0%
TGTGTGTGTGTGTGAAGGTG+AGG - chr4.3:5479618-5479637 None:intergenic 50.0%
! TTCAAGGGCATGGACTTGGT+GGG + chr4.3:5480509-5480528 MS.gene55733:CDS 50.0%
! GTTCAAGGGCATGGACTTGG+TGG + chr4.3:5480508-5480527 MS.gene55733:CDS 55.0%
!! TCAAGGGCATGGACTTGGTG+GGG + chr4.3:5480510-5480529 MS.gene55733:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 5478692 5480627 5478692 ID=MS.gene55733
chr4.3 mRNA 5478692 5480627 5478692 ID=MS.gene55733.t1;Parent=MS.gene55733
chr4.3 exon 5478692 5478707 5478692 ID=MS.gene55733.t1.exon1;Parent=MS.gene55733.t1
chr4.3 CDS 5478692 5478707 5478692 ID=cds.MS.gene55733.t1;Parent=MS.gene55733.t1
chr4.3 exon 5478805 5478934 5478805 ID=MS.gene55733.t1.exon2;Parent=MS.gene55733.t1
chr4.3 CDS 5478805 5478934 5478805 ID=cds.MS.gene55733.t1;Parent=MS.gene55733.t1
chr4.3 exon 5479934 5480627 5479934 ID=MS.gene55733.t1.exon3;Parent=MS.gene55733.t1
chr4.3 CDS 5479934 5480627 5479934 ID=cds.MS.gene55733.t1;Parent=MS.gene55733.t1
Gene Sequence

>MS.gene55733

ATGATGATTAATAGTAGTAGGTTACATAATAGAACTAATTAACTTCCCCTTCTATTATATCAATTATGTGTTTAATTAACCAACAATTAAAATTTTGTTTCTTAAATAATCAGGGCTTCAAAGATGTGGTAAGAGTTGCCGATTGAGATGGATAAATTATTTAAGACCTGATATTAGAAGAGGAAGGTTTACACCTGATGAGGAGAAGTTAATTATTAGCCTTCACAGTGTTGTTGGCAACAGGTATGATTTGTCGTTAATTCATTCAATATTACACTACCTCCTATTATAGCTCTTGATTTTGAATTGTAATCACTAATCACTTGATCATCAATGATCTTCCCTTATTGCTTGCTTCCATTTTCTTTATTGTATTCATTAATTGAACAAGAATCTTTAATGAGGTATAACAAACCAAGTCCCTAACTAGACCTACCATTGGTTAGCATGTGTTTGGATTTGGATTCGATTTGGCACTTCAAATCTCGCATCACAATGTATGTTGAAAGTGAAATTCCTGAAGCTACAATATGAAGCTTCTGTGTTGCTGAGATATTTCACAGCAATTTTGTATTAATCAACACGGAACCAAACATATATATGCTTAATGTGATTGTATATATGTTAAATATAAATCAGATCATTTGGTATTTGGATATTCTTTACAGCAACGATCTCGTCAATGATAAACGATTGGTTATGTTATGATACTGAACTATTCTAGATATCGAATTTGTATTTTATATATATAAAAGATTGTCAAATATTCATTAAGAGTTAAGTGAGTTAAATTAAGGCTATATGAAGGAGCTATGAAAGTTTCAACTTCCAAACTTCTGTTTTAGACATGTAATTAAGCAATAGGCAATTGAACTTCTTTTAGATGAAATCTTTGTTAAAATTTGTGTTCCTAATTCCTATAGCCTCACCTTCACACACACACACACACACACACACGCACACACACCTCATTACTAAGAGATTAGGTTTATCAGGGCTTATATAAATATGGAAAATGTTAAATTTCCCAAAAGAAATCGTCCCGAGATTGTCCGGAATTCACATGATATTGGTTAATTAACAATAAGCTGCTGTGTTTTCCACTAGTAAAAAATGAAAGTCTTTTGGCTTTAACACATAATAACTCACATCGGGATGTTTCACGCACAAGCACTTCGCTATATATAGATTTTGTACTTTTAAACTTATATTTTATTTATTGAATTTGGGAATGAAATGCAGATGGGCTCACATTGCAAGTCACTTACCTGGTAGAACTGACAATGAAATAAAGAATTACTGGAATTCATGGATCAAAAAGAAAATAAGAAAGCATTCATCAAGCTCTAATTCAACCACTAATAATGTTACACAAAATGTTGTTCATCATTCCCACCTCAATTATAATTCTAATATAAAATTAGACCAGTTTTCCAACCAAGAGAATATAACAACAGCAAAACCACCAGAAACAACCTTGTTTTCTCCCACATGCCCTTTGTTTATGTTTGAGCCCGGTGATTCATTTCATGGAACAACAACAGAAAACAGTAATAATCTGCAAACCGATCAATACTTCCAAGATTCTATAAACGGTATAAGCTCTGAAACATGGAATCAAGTCCAATCATCACTACCTCCTCCAATATCAACAACTTTTTCAATGGACACAATGAATTATCTACCACCTTTGATAGAGAATGTGGAAAACATGGACGAGGAAGGAGATCATAGAGGAGTACTAGAATGCTTGCAGAGTCAATGGGTAGAAACACATCAACAATGTCCTAATAACTTTCTTTTCTGGGACAATATTGTTCAAGGGCATGGACTTGGTGGGGAAGAACAACTACCACCAAATTCATCAAATATGGGAACAAACAGTACTACACTTTCTCCTTTTCCTTCTTCTTCTTTTAGAGATAACAATTATTGA
Protein sequence

>MS.gene55733.t1

MMINSRLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKHSSSSNSTTNNVTQNVVHHSHLNYNSNIKLDQFSNQENITTAKPPETTLFSPTCPLFMFEPGDSFHGTTTENSNNLQTDQYFQDSINGISSETWNQVQSSLPPPISTTFSMDTMNYLPPLIENVENMDEEGDHRGVLECLQSQWVETHQQCPNNFLFWDNIVQGHGLGGEEQLPPNSSNMGTNSTTLSPFPSSSFRDNNY