Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56030.t1 | XP_024632431.1 | 98.4 | 761 | 11 | 1 | 1 | 760 | 1 | 761 | 0.00E+00 | 1539.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56030.t1 | Q9SY66 | 57.0 | 669 | 284 | 2 | 8 | 676 | 11 | 675 | 4.6e-228 | 792.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56030.t1 | A0A396J9K3 | 98.4 | 761 | 11 | 1 | 1 | 760 | 1 | 761 | 0.0e+00 | 1539.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene56030.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058191 | MS.gene56030 | 0.992621 | 2.11E-194 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56030.t1 | MTR_4g035820 | 41.297 | 293 | 159 | 4 | 8 | 298 | 43 | 324 | 1.10e-59 | 214 |
MS.gene56030.t1 | MTR_4g035820 | 33.043 | 115 | 71 | 1 | 430 | 544 | 325 | 433 | 4.73e-13 | 73.2 |
MS.gene56030.t1 | MTR_3g450850 | 40.000 | 290 | 159 | 7 | 2 | 282 | 3 | 286 | 3.25e-56 | 196 |
MS.gene56030.t1 | MTR_6g051425 | 29.487 | 312 | 198 | 5 | 46 | 340 | 18 | 324 | 4.42e-31 | 125 |
MS.gene56030.t1 | MTR_3g012160 | 54.839 | 93 | 42 | 0 | 191 | 283 | 1 | 93 | 1.13e-29 | 113 |
MS.gene56030.t1 | MTR_1g070355 | 29.289 | 239 | 151 | 8 | 51 | 284 | 80 | 305 | 3.23e-18 | 89.4 |
MS.gene56030.t1 | MTR_6g014355 | 35.246 | 122 | 77 | 1 | 115 | 234 | 5 | 126 | 1.42e-17 | 83.6 |
MS.gene56030.t1 | MTR_0402s0040 | 29.952 | 207 | 113 | 9 | 26 | 220 | 6 | 192 | 1.51e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56030.t1 | AT1G10240 | 57.815 | 659 | 274 | 2 | 18 | 676 | 21 | 675 | 0.0 | 817 |
MS.gene56030.t1 | AT1G10240 | 57.815 | 659 | 274 | 2 | 18 | 676 | 21 | 675 | 0.0 | 817 |
MS.gene56030.t1 | AT5G28530 | 40.491 | 652 | 352 | 9 | 26 | 661 | 39 | 670 | 3.57e-164 | 490 |
MS.gene56030.t1 | AT5G28530 | 40.491 | 652 | 352 | 9 | 26 | 661 | 39 | 670 | 3.57e-164 | 490 |
MS.gene56030.t1 | AT5G28530 | 40.031 | 652 | 359 | 8 | 26 | 661 | 39 | 674 | 5.90e-164 | 490 |
MS.gene56030.t1 | AT5G28530 | 36.604 | 642 | 332 | 9 | 26 | 661 | 39 | 611 | 6.91e-130 | 400 |
MS.gene56030.t1 | AT5G28530 | 37.072 | 642 | 325 | 10 | 26 | 661 | 39 | 607 | 7.29e-130 | 400 |
MS.gene56030.t1 | AT4G38180 | 30.729 | 576 | 385 | 9 | 41 | 610 | 69 | 636 | 1.21e-82 | 280 |
MS.gene56030.t1 | AT4G15090 | 26.947 | 642 | 444 | 12 | 19 | 649 | 25 | 652 | 1.53e-63 | 228 |
MS.gene56030.t1 | AT4G15090 | 26.947 | 642 | 444 | 12 | 19 | 649 | 25 | 652 | 1.53e-63 | 228 |
MS.gene56030.t1 | AT4G15090 | 26.947 | 642 | 444 | 12 | 19 | 649 | 25 | 652 | 1.53e-63 | 228 |
MS.gene56030.t1 | AT4G15090 | 26.947 | 642 | 444 | 12 | 19 | 649 | 25 | 652 | 1.53e-63 | 228 |
MS.gene56030.t1 | AT4G15090 | 26.947 | 642 | 444 | 12 | 19 | 649 | 25 | 652 | 1.53e-63 | 228 |
MS.gene56030.t1 | AT3G22170 | 25.589 | 637 | 403 | 18 | 22 | 626 | 33 | 630 | 1.41e-60 | 219 |
MS.gene56030.t1 | AT3G22170 | 25.589 | 637 | 403 | 18 | 22 | 626 | 33 | 630 | 1.41e-60 | 219 |
MS.gene56030.t1 | AT1G76320 | 27.353 | 563 | 373 | 10 | 51 | 603 | 3 | 539 | 1.85e-56 | 205 |
MS.gene56030.t1 | AT1G76320 | 27.353 | 563 | 373 | 10 | 51 | 603 | 3 | 539 | 3.60e-56 | 205 |
MS.gene56030.t1 | AT1G76320 | 27.353 | 563 | 373 | 10 | 51 | 603 | 3 | 539 | 3.91e-56 | 205 |
MS.gene56030.t1 | AT1G76320 | 27.353 | 563 | 373 | 10 | 51 | 603 | 3 | 539 | 3.91e-56 | 205 |
MS.gene56030.t1 | AT2G27110 | 26.403 | 606 | 373 | 17 | 11 | 603 | 29 | 574 | 6.93e-52 | 194 |
MS.gene56030.t1 | AT2G27110 | 26.403 | 606 | 373 | 17 | 11 | 603 | 29 | 574 | 6.93e-52 | 194 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 24 | 554 | 1.94e-48 | 183 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 24 | 554 | 1.94e-48 | 183 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 24 | 554 | 2.13e-48 | 183 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 38 | 568 | 2.15e-48 | 183 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 24 | 554 | 3.72e-48 | 182 |
MS.gene56030.t1 | AT4G19990 | 25.958 | 574 | 364 | 11 | 48 | 603 | 24 | 554 | 3.72e-48 | 182 |
MS.gene56030.t1 | AT2G27110 | 29.765 | 383 | 259 | 7 | 227 | 603 | 51 | 429 | 4.52e-47 | 179 |
MS.gene56030.t1 | AT1G52520 | 26.019 | 638 | 394 | 19 | 45 | 647 | 85 | 679 | 2.79e-46 | 176 |
MS.gene56030.t1 | AT3G06250 | 26.990 | 578 | 335 | 18 | 45 | 603 | 190 | 699 | 5.60e-46 | 176 |
MS.gene56030.t1 | AT3G06250 | 26.990 | 578 | 335 | 18 | 45 | 603 | 190 | 699 | 5.60e-46 | 176 |
MS.gene56030.t1 | AT3G06250 | 26.990 | 578 | 335 | 18 | 45 | 603 | 190 | 699 | 5.60e-46 | 176 |
MS.gene56030.t1 | AT1G80010 | 25.763 | 590 | 381 | 16 | 45 | 604 | 95 | 657 | 1.78e-43 | 168 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 3.98e-43 | 167 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 4.41e-43 | 168 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 4.41e-43 | 168 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 4.41e-43 | 168 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 5.10e-43 | 167 |
MS.gene56030.t1 | AT2G32250 | 23.944 | 568 | 368 | 13 | 48 | 607 | 41 | 552 | 5.10e-43 | 167 |
MS.gene56030.t1 | AT5G18960 | 25.220 | 567 | 362 | 15 | 45 | 603 | 211 | 723 | 9.47e-43 | 167 |
MS.gene56030.t1 | AT5G18960 | 25.220 | 567 | 362 | 15 | 45 | 603 | 211 | 723 | 9.47e-43 | 167 |
MS.gene56030.t1 | AT2G32250 | 23.894 | 565 | 366 | 13 | 51 | 607 | 3 | 511 | 1.39e-42 | 166 |
MS.gene56030.t1 | AT2G32250 | 23.894 | 565 | 366 | 13 | 51 | 607 | 3 | 511 | 1.42e-42 | 166 |
MS.gene56030.t1 | AT4G19990 | 25.660 | 530 | 334 | 10 | 92 | 603 | 10 | 497 | 2.69e-42 | 164 |
MS.gene56030.t1 | AT4G38170 | 27.822 | 381 | 260 | 7 | 231 | 603 | 21 | 394 | 2.26e-41 | 159 |
MS.gene56030.t1 | AT3G07500 | 26.484 | 219 | 142 | 7 | 15 | 225 | 3 | 210 | 1.23e-11 | 65.5 |
Find 162 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCTTCAGAAGGTTTATTT+TGG | 0.139353 | 2.3:+55962604 | None:intergenic |
TCCAAATATTGTATCCTTTC+AGG | 0.144098 | 2.3:+55959163 | None:intergenic |
ATGACATGCTGTTGGGAATT+TGG | 0.166402 | 2.3:-55962038 | MS.gene56030:CDS |
CTTGACAGAATTGTTTCTTC+TGG | 0.176241 | 2.3:+55962816 | None:intergenic |
ATTCAATCATATGAGGTATT+TGG | 0.211487 | 2.3:-55962102 | MS.gene56030:CDS |
GTTCCATCGGCTCTACAATT+TGG | 0.214855 | 2.3:-55959969 | MS.gene56030:CDS |
ACCTCAATATGCATCCTTTC+TGG | 0.234586 | 2.3:-55959440 | MS.gene56030:CDS |
GCCTGAAAGGATACAATATT+TGG | 0.244750 | 2.3:-55959164 | MS.gene56030:CDS |
TGACATTATGCAGGCTTTCT+TGG | 0.255053 | 2.3:-55960173 | MS.gene56030:intron |
TATACTCATTAAGGACATTC+TGG | 0.255249 | 2.3:-55959865 | MS.gene56030:CDS |
TTTGATTTCAACACTTCTAA+TGG | 0.258402 | 2.3:-55959137 | MS.gene56030:CDS |
CAAAAGGCATGTTTACTTTC+GGG | 0.259449 | 2.3:+55960070 | None:intergenic |
GTGTTAGAATCATCCGAAAA+TGG | 0.272557 | 2.3:-55962882 | MS.gene56030:CDS |
GTCCCTGAATGGCGTGTTAC+TGG | 0.284993 | 2.3:-55962492 | MS.gene56030:CDS |
AAGGCAAATGTTAAGATTAA+TGG | 0.285271 | 2.3:-55962343 | MS.gene56030:CDS |
CCCTAGTTGCACCATGAAAA+TGG | 0.296263 | 2.3:+55959191 | None:intergenic |
TTGAGGCGATATTTCTTTGC+AGG | 0.296991 | 2.3:-55959830 | MS.gene56030:CDS |
TTGACAGAATTGTTTCTTCT+GGG | 0.311597 | 2.3:+55962817 | None:intergenic |
ACAAATCTTTGACCAATAAA+AGG | 0.311831 | 2.3:+55962771 | None:intergenic |
CCGTTGGATGAAAACGTTAA+TGG | 0.319103 | 2.3:+55959781 | None:intergenic |
TGGCTTGGATTGGACAATAA+TGG | 0.319336 | 2.3:-55962018 | MS.gene56030:CDS |
ACAAAAGGCATGTTTACTTT+CGG | 0.321090 | 2.3:+55960069 | None:intergenic |
ATGGAGGTTGCAAAGTGTTT+TGG | 0.321516 | 2.3:-55959375 | MS.gene56030:CDS |
TTATTAGCCTATACTCATTA+AGG | 0.323374 | 2.3:-55959874 | MS.gene56030:CDS |
GACATTATGCAGGCTTTCTT+GGG | 0.327633 | 2.3:-55960172 | MS.gene56030:intron |
CCTCATGATTCCATGGCTTT+AGG | 0.327738 | 2.3:-55958923 | MS.gene56030:CDS |
CTCACATCTATCTCTGTAAA+AGG | 0.340205 | 2.3:+55962288 | None:intergenic |
AGGCAAATGGTGGATAAATA+TGG | 0.340475 | 2.3:-55959917 | MS.gene56030:CDS |
AACCACAGCGAGATGATTTA+CGG | 0.342181 | 2.3:+55962556 | None:intergenic |
AAACCAGTAACACGCCATTC+AGG | 0.361653 | 2.3:+55962489 | None:intergenic |
GGATGATTCTAACACAAAAC+TGG | 0.371625 | 2.3:+55962890 | None:intergenic |
TCACCATTATGTGCACAATA+TGG | 0.372426 | 2.3:-55958836 | MS.gene56030:CDS |
CTTTAGCAAACATGCATATA+CGG | 0.380754 | 2.3:+55962379 | None:intergenic |
GATACTGATGAAATGATTCA+TGG | 0.382834 | 2.3:-55958962 | MS.gene56030:CDS |
CTTTAGTTGCGCCCTTCTGC+GGG | 0.388321 | 2.3:-55961983 | MS.gene56030:CDS |
GTGCTGCAACTAGCTCTTCC+TGG | 0.388829 | 2.3:+55959461 | None:intergenic |
GGCCAACCCCATCTTTCCCT+CGG | 0.389341 | 2.3:+55962673 | None:intergenic |
CTCTTATCATCAGGAGATAT+CGG | 0.409413 | 2.3:+55962402 | None:intergenic |
CACCGCACCCGAGGGAAAGA+TGG | 0.410004 | 2.3:-55962681 | MS.gene56030:CDS |
CAAAATAAACCTTCTGAAGA+TGG | 0.410862 | 2.3:-55962603 | MS.gene56030:CDS |
GTTGGGAATTTGGCTTGGAT+TGG | 0.415439 | 2.3:-55962028 | MS.gene56030:CDS |
TCAAGATAGATAATAATAAC+AGG | 0.416672 | 2.3:-55962158 | MS.gene56030:CDS |
TGATCAGTCAGTATTGTTTG+TGG | 0.423171 | 2.3:+55960130 | None:intergenic |
TGGATCTGATTGCTCAATAA+TGG | 0.423232 | 2.3:-55958807 | MS.gene56030:CDS |
AGATTAATGGAGCTAGAAAA+AGG | 0.423796 | 2.3:-55962330 | MS.gene56030:CDS |
TTGAATAAGACGCACCTCAT+TGG | 0.427145 | 2.3:+55962434 | None:intergenic |
CAGAAAGTCTGCCTGAAAAC+AGG | 0.429730 | 2.3:-55959541 | MS.gene56030:CDS |
AATATGAGTGAAGATGCATT+AGG | 0.432322 | 2.3:-55958776 | MS.gene56030:CDS |
ATAAAACCAGTCAGAGAACT+TGG | 0.433668 | 2.3:+55960030 | None:intergenic |
AATTCCCAACAGCATGTCAT+AGG | 0.437999 | 2.3:+55962041 | None:intergenic |
TGGAGTTTGCTCAAGGCATA+AGG | 0.440065 | 2.3:+55959481 | None:intergenic |
ATGCTGTTGGGAATTTGGCT+TGG | 0.440367 | 2.3:-55962033 | MS.gene56030:CDS |
CCGATCCGATGGCGAAGCAT+TGG | 0.446813 | 2.3:-55959229 | MS.gene56030:CDS |
ATATGCATGTTTGCTAAAGC+TGG | 0.454030 | 2.3:-55962375 | MS.gene56030:CDS |
TTCTCTCCAAGTTCTCTGAC+TGG | 0.459666 | 2.3:-55960036 | MS.gene56030:CDS |
TCATCAGTATCTTCTACCTC+TGG | 0.460431 | 2.3:+55958974 | None:intergenic |
AAGAAATATCGCCTCAAGAA+TGG | 0.462464 | 2.3:+55959836 | None:intergenic |
GGGAAAGATGGGGTTGGCCG+AGG | 0.467224 | 2.3:-55962669 | MS.gene56030:CDS |
CATATACGGCTCTTATCATC+AGG | 0.473122 | 2.3:+55962393 | None:intergenic |
ATATGAGTGAAGATGCATTA+GGG | 0.474188 | 2.3:-55958775 | MS.gene56030:CDS |
GAGAATATGCCATATACAAA+AGG | 0.474322 | 2.3:+55960054 | None:intergenic |
GCTTTAGTTGCGCCCTTCTG+CGG | 0.475590 | 2.3:-55961984 | MS.gene56030:CDS |
AAAATAAACCTTCTGAAGAT+GGG | 0.478175 | 2.3:-55962602 | MS.gene56030:CDS |
CGGATCGGTAAATATTGATC+CGG | 0.479172 | 2.3:+55959244 | None:intergenic |
CTCATCAATTCAATCATATG+AGG | 0.479395 | 2.3:-55962109 | MS.gene56030:CDS |
ACCGCACCCGAGGGAAAGAT+GGG | 0.481862 | 2.3:-55962680 | MS.gene56030:CDS |
AAATGGCACGGATTTGTCTC+AGG | 0.484239 | 2.3:-55962865 | MS.gene56030:CDS |
TGTCCATATTGTGCACATAA+TGG | 0.485930 | 2.3:+55958833 | None:intergenic |
GTGGCAGCATGGGATTCTAT+AGG | 0.487656 | 2.3:+55959514 | None:intergenic |
CTTGGGCTTCATGAAAGGAA+AGG | 0.491097 | 2.3:-55960155 | MS.gene56030:CDS |
ATACTCATTAAGGACATTCT+GGG | 0.491639 | 2.3:-55959864 | MS.gene56030:CDS |
GCCAACCCCATCTTTCCCTC+GGG | 0.498859 | 2.3:+55962674 | None:intergenic |
CCCCATCTTTCCCTCGGGTG+CGG | 0.504235 | 2.3:+55962679 | None:intergenic |
TTATGCCTTGAGCAAACTCC+AGG | 0.504552 | 2.3:-55959479 | MS.gene56030:CDS |
TCGGCTCTACAATTTGGAAA+TGG | 0.504763 | 2.3:-55959963 | MS.gene56030:CDS |
TGCTTGTGACCAAGTTTCAA+TGG | 0.504988 | 2.3:-55959083 | MS.gene56030:CDS |
TGACAGAATTGTTTCTTCTG+GGG | 0.509932 | 2.3:+55962818 | None:intergenic |
GCTTTCTTGGGCTTCATGAA+AGG | 0.511793 | 2.3:-55960160 | MS.gene56030:CDS |
GAGGCCTATGACATGCTGTT+GGG | 0.513583 | 2.3:-55962045 | MS.gene56030:CDS |
CATGGCTTTAGGCAAGCTAA+AGG | 0.513686 | 2.3:-55958912 | MS.gene56030:CDS |
TGAAGAAAGCTGGAGGCAAA+TGG | 0.514494 | 2.3:-55959930 | MS.gene56030:CDS |
CTCTTCCTGGAGTTTGCTCA+AGG | 0.516928 | 2.3:+55959474 | None:intergenic |
AACCAGTAACACGCCATTCA+GGG | 0.519550 | 2.3:+55962490 | None:intergenic |
TGCAAATCCTCATGATTCCA+TGG | 0.519849 | 2.3:-55958930 | MS.gene56030:CDS |
CTTTAGCTTGCCTAAAGCCA+TGG | 0.519923 | 2.3:+55958913 | None:intergenic |
AGAATGTCCTTAATGAGTAT+AGG | 0.523345 | 2.3:+55959867 | None:intergenic |
GAGTACATTGCATGGTCCTA+CGG | 0.523416 | 2.3:-55962132 | MS.gene56030:CDS |
AAGGAGAGAAGGGCAAGAGA+TGG | 0.526646 | 2.3:-55958893 | MS.gene56030:CDS |
GCATCCTTTCTGGTTGATGA+AGG | 0.529559 | 2.3:-55959430 | MS.gene56030:CDS |
AACCTCCATCGGTCTGAGAA+TGG | 0.539487 | 2.3:+55959389 | None:intergenic |
AAACACTTTGCAACCTCCAT+CGG | 0.539933 | 2.3:+55959378 | None:intergenic |
TATTGCATTTAGTTATGCAT+CGG | 0.541431 | 2.3:-55959011 | MS.gene56030:CDS |
GGACTCGGTCTGACATGTAC+TGG | 0.541636 | 2.3:+55959802 | None:intergenic |
GGCATAAGGAGTAAGTATAG+TGG | 0.542397 | 2.3:+55959495 | None:intergenic |
AGAGGCCTATGACATGCTGT+TGG | 0.543489 | 2.3:-55962046 | MS.gene56030:CDS |
CAACTAGGGATCAGCCTGAA+AGG | 0.544870 | 2.3:-55959177 | MS.gene56030:CDS |
CAGTATCTTCTACCTCTGGC+AGG | 0.547423 | 2.3:+55958978 | None:intergenic |
TAGGCAAGCTAAAGGAGAGA+AGG | 0.550540 | 2.3:-55958904 | MS.gene56030:CDS |
ATCAATATTTACCGATCCGA+TGG | 0.556315 | 2.3:-55959240 | MS.gene56030:CDS |
ACCAGAAAGGATGCATATTG+AGG | 0.558654 | 2.3:+55959439 | None:intergenic |
AGTAAGTATAGTGGCAGCAT+GGG | 0.558789 | 2.3:+55959504 | None:intergenic |
GCATACTTTCATCCCGCAGA+AGG | 0.560022 | 2.3:+55961971 | None:intergenic |
AAGGCGTTCCTCAGTTTCAA+CGG | 0.562753 | 2.3:+55959111 | None:intergenic |
CTAAAGCTGGAATGTCGGTA+AGG | 0.564431 | 2.3:-55962362 | MS.gene56030:CDS |
GAGTAAGTATAGTGGCAGCA+TGG | 0.565564 | 2.3:+55959503 | None:intergenic |
GTGATAGCACCATTGAAACT+TGG | 0.565620 | 2.3:+55959074 | None:intergenic |
AGTGGAAAGCTGAGTTCCAT+CGG | 0.569331 | 2.3:-55959982 | MS.gene56030:CDS |
CCAATGCTTCGCCATCGGAT+CGG | 0.569640 | 2.3:+55959229 | None:intergenic |
CTTGGTCACAAGCAACATCA+AGG | 0.570174 | 2.3:+55959092 | None:intergenic |
TGTGCACAATATGGACATGA+TGG | 0.571985 | 2.3:-55958827 | MS.gene56030:CDS |
AATCCCTCCTTGTTACTCCT+CGG | 0.572238 | 2.3:+55962652 | None:intergenic |
TGAGGTATTTGGTGATGCTG+TGG | 0.573633 | 2.3:-55962091 | MS.gene56030:CDS |
AGGCAAGCTAAAGGAGAGAA+GGG | 0.573940 | 2.3:-55958903 | MS.gene56030:CDS |
ATTTATGCCATGTGATGACC+TGG | 0.577733 | 2.3:+55959036 | None:intergenic |
GCTCTACAATTTGGAAATGG+TGG | 0.580387 | 2.3:-55959960 | MS.gene56030:CDS |
ACAACCTTCATCAACCAGAA+AGG | 0.583485 | 2.3:+55959426 | None:intergenic |
TTGGGTCGCAATACGATGAG+TGG | 0.584461 | 2.3:-55960000 | MS.gene56030:CDS |
TCTGGGCTTTACCATTCTTG+AGG | 0.584691 | 2.3:-55959847 | MS.gene56030:CDS |
ACAAACCAATGCTTCGCCAT+CGG | 0.585042 | 2.3:+55959224 | None:intergenic |
TTTCCAAATTGTAGAGCCGA+TGG | 0.585557 | 2.3:+55959966 | None:intergenic |
GAGCAAAGCAAAAGATGCAA+AGG | 0.586020 | 2.3:-55959570 | MS.gene56030:CDS |
CAGCTGATGTGCTCTTGACA+AGG | 0.588190 | 2.3:+55959349 | None:intergenic |
CATACTTTCATCCCGCAGAA+GGG | 0.593580 | 2.3:+55961972 | None:intergenic |
ATTAGACGACACCGCACCCG+AGG | 0.595086 | 2.3:-55962690 | MS.gene56030:CDS |
AAATAAACCTTCTGAAGATG+GGG | 0.596801 | 2.3:-55962601 | MS.gene56030:CDS |
GTCATAGGCCTCTACTCGGT+AGG | 0.599446 | 2.3:+55962056 | None:intergenic |
CACGTGTTAAAACTCTTCCC+AGG | 0.602561 | 2.3:-55959054 | MS.gene56030:CDS |
GCATGTCATAGGCCTCTACT+CGG | 0.603797 | 2.3:+55962052 | None:intergenic |
ACCCGAGGGAAAGATGGGGT+TGG | 0.604145 | 2.3:-55962675 | MS.gene56030:CDS |
ATTGTGCACTCAAGAACCGT+TGG | 0.604864 | 2.3:+55959765 | None:intergenic |
AATGGAATCCGTTGAAACTG+AGG | 0.605527 | 2.3:-55959119 | MS.gene56030:CDS |
TGATACAACCTACCGAGTAG+AGG | 0.608589 | 2.3:-55962064 | MS.gene56030:CDS |
GGGGAGGAGGAAAAGCGCAA+AGG | 0.609723 | 2.3:-55962581 | MS.gene56030:CDS |
GTTTGCTAAAGCTGGAATGT+CGG | 0.610570 | 2.3:-55962367 | MS.gene56030:CDS |
TGCCTGAAAACTCAAATAGA+CGG | 0.614950 | 2.3:+55959320 | None:intergenic |
GGATCGGTAAATATTGATCC+GGG | 0.615359 | 2.3:+55959245 | None:intergenic |
CACCATTCTCAGACCGATGG+AGG | 0.619807 | 2.3:-55959391 | MS.gene56030:CDS |
GGATGACATTGGCACTGTCG+AGG | 0.620402 | 2.3:-55962844 | MS.gene56030:CDS |
TGATTGAATTGATGAGCCGT+AGG | 0.623124 | 2.3:+55962116 | None:intergenic |
GATGAAAACGTTAATGGACT+CGG | 0.633126 | 2.3:+55959787 | None:intergenic |
TTTGGGGAAATCCGCCGCGG+TGG | 0.634972 | 2.3:+55962622 | None:intergenic |
AGACACCATTCTCAGACCGA+TGG | 0.638459 | 2.3:-55959394 | MS.gene56030:CDS |
CCTAAAGCCATGGAATCATG+AGG | 0.642544 | 2.3:+55958923 | None:intergenic |
TTAGACGACACCGCACCCGA+GGG | 0.644198 | 2.3:-55962689 | MS.gene56030:CDS |
ACTGACAGCAGAATGTCAGA+AGG | 0.645913 | 2.3:-55962915 | None:intergenic |
GATTTGTCTCAGGATGACAT+TGG | 0.645917 | 2.3:-55962855 | MS.gene56030:CDS |
AGAATCATCCGAAAATGGCA+CGG | 0.647458 | 2.3:-55962877 | MS.gene56030:CDS |
AGAAAGCTGGAGGCAAATGG+TGG | 0.650737 | 2.3:-55959927 | MS.gene56030:CDS |
ACAGGCTCGAGTACATTGCA+TGG | 0.652102 | 2.3:-55962140 | MS.gene56030:CDS |
TACTGACTGATCATAACACA+TGG | 0.653234 | 2.3:-55960120 | MS.gene56030:CDS |
TGAGTTGTTAAAATCCAATG+AGG | 0.655034 | 2.3:-55962448 | MS.gene56030:CDS |
TTTGACCAATAAAAGGAACA+AGG | 0.658851 | 2.3:+55962778 | None:intergenic |
ACTCTTCCCAGGTCATCACA+TGG | 0.672595 | 2.3:-55959043 | MS.gene56030:CDS |
AATAAACCTTCTGAAGATGG+GGG | 0.678235 | 2.3:-55962600 | MS.gene56030:CDS |
GGGTTGGCCGAGGAGTAACA+AGG | 0.686418 | 2.3:-55962659 | MS.gene56030:CDS |
TGGCCGAGGAGTAACAAGGA+GGG | 0.687273 | 2.3:-55962655 | MS.gene56030:CDS |
AACCGTAAATCATCTCGCTG+TGG | 0.688131 | 2.3:-55962558 | MS.gene56030:CDS |
GGATTCATTGATCCTGCCAG+AGG | 0.692463 | 2.3:-55958990 | MS.gene56030:CDS |
TTGGCCGAGGAGTAACAAGG+AGG | 0.692981 | 2.3:-55962656 | MS.gene56030:CDS |
TTGATCTCAGTAGAAAACGT+AGG | 0.706304 | 2.3:-55958868 | MS.gene56030:CDS |
CCGCACCCGAGGGAAAGATG+GGG | 0.712775 | 2.3:-55962679 | MS.gene56030:CDS |
TTTATGCCATGTGATGACCT+GGG | 0.750808 | 2.3:+55959037 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGTAAATTATAGTTAATTA+TGG | + | chr2.3:55962042-55962061 | None:intergenic | 10.0% |
!!! | GATCTTATTTTTAAATTTTA+GGG | - | chr2.3:55960418-55960437 | MS.gene56030:intron | 10.0% |
!!! | TGATCTTATTTTTAAATTTT+AGG | - | chr2.3:55960417-55960436 | MS.gene56030:intron | 10.0% |
!! | AATTAACTATAATTTACTAC+AGG | - | chr2.3:55962043-55962062 | MS.gene56030:CDS | 15.0% |
!! | TAAAGTTTAATCTTGAATAA+TGG | - | chr2.3:55960544-55960563 | MS.gene56030:intron | 15.0% |
!! | TAGGGAAAAAAAATTAAAAA+AGG | - | chr2.3:55960436-55960455 | MS.gene56030:intron | 15.0% |
!!! | AAAATTTGCTATACAAATAT+TGG | + | chr2.3:55961422-55961441 | None:intergenic | 15.0% |
!!! | AATTTTGCCTAATAAATATT+TGG | - | chr2.3:55960934-55960953 | MS.gene56030:intron | 15.0% |
!!! | ATCTATTTACTAAATTTTCA+TGG | - | chr2.3:55960335-55960354 | MS.gene56030:intron | 15.0% |
!!! | ATTTTGCCTAATAAATATTT+GGG | - | chr2.3:55960935-55960954 | MS.gene56030:intron | 15.0% |
!!! | CATATAAACTTTTATGATTT+TGG | + | chr2.3:55961066-55961085 | None:intergenic | 15.0% |
!!! | GATATGGATTAAATTTTAAA+CGG | - | chr2.3:55960008-55960027 | MS.gene56030:CDS | 15.0% |
!!! | TCTTTTAATATATAGATGAA+GGG | + | chr2.3:55960122-55960141 | None:intergenic | 15.0% |
!! | AACCAAGACATTTAAAAAAA+AGG | + | chr2.3:55961168-55961187 | None:intergenic | 20.0% |
!! | AATAGATAACTAATTAGACA+AGG | + | chr2.3:55960322-55960341 | None:intergenic | 20.0% |
!! | ATGCTATCATTAAAAAAGTA+AGG | + | chr2.3:55959917-55959936 | None:intergenic | 20.0% |
!! | ATTGAGTGAATATTTCTTAA+TGG | + | chr2.3:55960463-55960482 | None:intergenic | 20.0% |
!! | CTTAAACCCAAATATTTATT+AGG | + | chr2.3:55960944-55960963 | None:intergenic | 20.0% |
!! | TCAAGATAGATAATAATAAC+AGG | - | chr2.3:55959511-55959530 | MS.gene56030:CDS | 20.0% |
!! | TGCTCAAAAAAAAAAAACAA+AGG | + | chr2.3:55961978-55961997 | None:intergenic | 20.0% |
!! | TTAAAAAGTTCACATGTTTA+AGG | + | chr2.3:55961125-55961144 | None:intergenic | 20.0% |
!! | TTGAGTGAATATTTCTTAAT+GGG | + | chr2.3:55960462-55960481 | None:intergenic | 20.0% |
!!! | CTCTTTTAATATATAGATGA+AGG | + | chr2.3:55960123-55960142 | None:intergenic | 20.0% |
! | AAAGACATAAAGGACTAATA+CGG | - | chr2.3:55960879-55960898 | MS.gene56030:intron | 25.0% |
! | AAGGCAAATGTTAAGATTAA+TGG | - | chr2.3:55959326-55959345 | MS.gene56030:CDS | 25.0% |
! | ACAAATCTTTGACCAATAAA+AGG | + | chr2.3:55958901-55958920 | None:intergenic | 25.0% |
! | ACAATACCATCATATCTTAT+CGG | + | chr2.3:55959877-55959896 | None:intergenic | 25.0% |
! | ACTTGAACAAAAAGACATAA+AGG | - | chr2.3:55960869-55960888 | MS.gene56030:intron | 25.0% |
! | ATATGTGGAAAAACCAAAAA+TGG | + | chr2.3:55960067-55960086 | None:intergenic | 25.0% |
! | GAAATAACTTAAAGGATGAT+AGG | - | chr2.3:55960908-55960927 | MS.gene56030:intron | 25.0% |
! | TAACTATAATTTACTACAGG+TGG | - | chr2.3:55962046-55962065 | MS.gene56030:CDS | 25.0% |
! | TATGTGGAAAAACCAAAAAT+GGG | + | chr2.3:55960066-55960085 | None:intergenic | 25.0% |
! | TATTGCATTTAGTTATGCAT+CGG | - | chr2.3:55962658-55962677 | MS.gene56030:CDS | 25.0% |
! | TTACATGCATATGAAATTCA+AGG | + | chr2.3:55961239-55961258 | None:intergenic | 25.0% |
! | TTTGATCATATAAGCTATGA+TGG | - | chr2.3:55960637-55960656 | MS.gene56030:intron | 25.0% |
!! | AAAATAAACCTTCTGAAGAT+GGG | - | chr2.3:55959067-55959086 | MS.gene56030:CDS | 25.0% |
!! | ATTCAATCATATGAGGTATT+TGG | - | chr2.3:55959567-55959586 | MS.gene56030:CDS | 25.0% |
!! | TCTTCTTTTAACCATTTTCA+TGG | - | chr2.3:55962467-55962486 | MS.gene56030:CDS | 25.0% |
!! | TTATTAGCCTATACTCATTA+AGG | - | chr2.3:55961795-55961814 | MS.gene56030:intron | 25.0% |
!! | TTTGATTTCAACACTTCTAA+TGG | - | chr2.3:55962532-55962551 | MS.gene56030:CDS | 25.0% |
!!! | AAAGGTCACATGTTTTTTTT+TGG | + | chr2.3:55961150-55961169 | None:intergenic | 25.0% |
!!! | ACTGGTTTTATTTACTTCTT+GGG | - | chr2.3:55961651-55961670 | MS.gene56030:intron | 25.0% |
!!! | ATCTTCAGAAGGTTTATTTT+GGG | + | chr2.3:55959067-55959086 | None:intergenic | 25.0% |
!!! | ATTTTAACAACTCATGATTG+TGG | + | chr2.3:55959215-55959234 | None:intergenic | 25.0% |
!!! | GACCTTTTTTTTAAATGTCT+TGG | - | chr2.3:55961163-55961182 | MS.gene56030:intron | 25.0% |
AAAACCAAAAATGGGAAAGA+AGG | + | chr2.3:55960058-55960077 | None:intergenic | 30.0% | |
AAAATCGAGTGAATTTAGTG+AGG | + | chr2.3:55960259-55960278 | None:intergenic | 30.0% | |
AAATCGAGTGAATTTAGTGA+GGG | + | chr2.3:55960258-55960277 | None:intergenic | 30.0% | |
AATATGAGTGAAGATGCATT+AGG | - | chr2.3:55962893-55962912 | MS.gene56030:CDS | 30.0% | |
ACTTGATGTTGAAATCCTTT+GGG | + | chr2.3:55960396-55960415 | None:intergenic | 30.0% | |
AGAATGTCCTTAATGAGTAT+AGG | + | chr2.3:55961805-55961824 | None:intergenic | 30.0% | |
AGAATTGTAGAAAAGGTCAA+CGG | + | chr2.3:55959953-55959972 | None:intergenic | 30.0% | |
AGATTAATGGAGCTAGAAAA+AGG | - | chr2.3:55959339-55959358 | MS.gene56030:CDS | 30.0% | |
ATACTCATTAAGGACATTCT+GGG | - | chr2.3:55961805-55961824 | MS.gene56030:intron | 30.0% | |
ATATGAGTGAAGATGCATTA+GGG | - | chr2.3:55962894-55962913 | MS.gene56030:CDS | 30.0% | |
ATCCCTAACTCATAATATGT+GGG | + | chr2.3:55960847-55960866 | None:intergenic | 30.0% | |
ATTAGTGCCATAAAATACAC+CGG | - | chr2.3:55961282-55961301 | MS.gene56030:intron | 30.0% | |
CCAATTTCAAAACACATTCT+TGG | - | chr2.3:55960499-55960518 | MS.gene56030:intron | 30.0% | |
CTCATCAATTCAATCATATG+AGG | - | chr2.3:55959560-55959579 | MS.gene56030:CDS | 30.0% | |
CTGTTACTAAAATGTCTATG+TGG | + | chr2.3:55960816-55960835 | None:intergenic | 30.0% | |
CTTCTTGATTGCTTGATATT+TGG | - | chr2.3:55959798-55959817 | MS.gene56030:CDS | 30.0% | |
CTTTAGCAAACATGCATATA+CGG | + | chr2.3:55959293-55959312 | None:intergenic | 30.0% | |
GAAATTGGAACTACAACTAT+GGG | + | chr2.3:55960487-55960506 | None:intergenic | 30.0% | |
GAGAATATGCCATATACAAA+AGG | + | chr2.3:55961618-55961637 | None:intergenic | 30.0% | |
GATACTGATGAAATGATTCA+TGG | - | chr2.3:55962707-55962726 | MS.gene56030:CDS | 30.0% | |
GGCACAATGAAATAACTTAA+AGG | - | chr2.3:55960900-55960919 | MS.gene56030:intron | 30.0% | |
TATACTCATTAAGGACATTC+TGG | - | chr2.3:55961804-55961823 | MS.gene56030:intron | 30.0% | |
TATGAAACCCTGAAAATCAT+AGG | + | chr2.3:55960737-55960756 | None:intergenic | 30.0% | |
TCAAATACAAGATTGTCAAG+TGG | + | chr2.3:55959778-55959797 | None:intergenic | 30.0% | |
TCATCTTATTGACATTATGC+AGG | - | chr2.3:55961487-55961506 | MS.gene56030:intron | 30.0% | |
TCCAAATATTGTATCCTTTC+AGG | + | chr2.3:55962509-55962528 | None:intergenic | 30.0% | |
TCGTTACAAAAACATCTACA+TGG | - | chr2.3:55959972-55959991 | MS.gene56030:CDS | 30.0% | |
TCTTGTCTATTGAATCTAGT+AGG | - | chr2.3:55961322-55961341 | MS.gene56030:intron | 30.0% | |
TGAAAATCATAGGACTACAA+TGG | + | chr2.3:55960727-55960746 | None:intergenic | 30.0% | |
TGAAATTGGAACTACAACTA+TGG | + | chr2.3:55960488-55960507 | None:intergenic | 30.0% | |
TGAGTTGTTAAAATCCAATG+AGG | - | chr2.3:55959221-55959240 | MS.gene56030:CDS | 30.0% | |
TGTAACGAGAATTGTAGAAA+AGG | + | chr2.3:55959960-55959979 | None:intergenic | 30.0% | |
TTTAATGCCCATGAAAAAGA+CGG | + | chr2.3:55959723-55959742 | None:intergenic | 30.0% | |
TTTGACCAATAAAAGGAACA+AGG | + | chr2.3:55958894-55958913 | None:intergenic | 30.0% | |
! | AAATAAACCTTCTGAAGATG+GGG | - | chr2.3:55959068-55959087 | MS.gene56030:CDS | 30.0% |
! | ACAAAAGGCATGTTTACTTT+CGG | + | chr2.3:55961603-55961622 | None:intergenic | 30.0% |
! | ATTGTAGTCCTATGATTTTC+AGG | - | chr2.3:55960726-55960745 | MS.gene56030:intron | 30.0% |
! | CAAAATAAACCTTCTGAAGA+TGG | - | chr2.3:55959066-55959085 | MS.gene56030:CDS | 30.0% |
! | CATCTTCAGAAGGTTTATTT+TGG | + | chr2.3:55959068-55959087 | None:intergenic | 30.0% |
! | GTAAACATGCCTTTTGTATA+TGG | - | chr2.3:55961606-55961625 | MS.gene56030:intron | 30.0% |
! | GTTAACCTTGTTCCTTTTAT+TGG | - | chr2.3:55958886-55958905 | MS.gene56030:CDS | 30.0% |
! | TAATAACTGTTTTCACATCC+CGG | - | chr2.3:55962406-55962425 | MS.gene56030:CDS | 30.0% |
! | TATTCTTCCGGTGTATTTTA+TGG | + | chr2.3:55961292-55961311 | None:intergenic | 30.0% |
! | TGCAGTTTTGCTAAACAATT+TGG | - | chr2.3:55958949-55958968 | MS.gene56030:CDS | 30.0% |
! | TTGACAGAATTGTTTCTTCT+GGG | + | chr2.3:55958855-55958874 | None:intergenic | 30.0% |
! | TTGTAGTCCTATGATTTTCA+GGG | - | chr2.3:55960727-55960746 | MS.gene56030:intron | 30.0% |
! | TTTTGTCCGATAAGATATGA+TGG | - | chr2.3:55959868-55959887 | MS.gene56030:CDS | 30.0% |
! | TTTTTGTGTTGCAGATCATA+TGG | - | chr2.3:55960275-55960294 | MS.gene56030:intron | 30.0% |
!! | AGATCATATGGTTCTGTTTT+AGG | - | chr2.3:55960287-55960306 | MS.gene56030:intron | 30.0% |
!! | ATGATTTTCAGGGTTTCATA+AGG | - | chr2.3:55960737-55960756 | MS.gene56030:intron | 30.0% |
!! | CACATAGACATTTTAGTAAC+AGG | - | chr2.3:55960814-55960833 | MS.gene56030:intron | 30.0% |
!! | TTTAAATGTCTTGGTTTGTG+TGG | - | chr2.3:55961172-55961191 | MS.gene56030:intron | 30.0% |
!!! | ACGCACATTTTTTTTTCCTA+GGG | + | chr2.3:55961352-55961371 | None:intergenic | 30.0% |
!!! | CCAAGAATGTGTTTTGAAAT+TGG | + | chr2.3:55960502-55960521 | None:intergenic | 30.0% |
!!! | GACTGGTTTTATTTACTTCT+TGG | - | chr2.3:55961650-55961669 | MS.gene56030:intron | 30.0% |
!!! | TCTTCAGAAGGTTTATTTTG+GGG | + | chr2.3:55959066-55959085 | None:intergenic | 30.0% |
AAATGGGAAAGAAGGTGAAA+TGG | + | chr2.3:55960050-55960069 | None:intergenic | 35.0% | |
AAGAAATATCGCCTCAAGAA+TGG | + | chr2.3:55961836-55961855 | None:intergenic | 35.0% | |
AATGGGAAAGAAGGTGAAAT+GGG | + | chr2.3:55960049-55960068 | None:intergenic | 35.0% | |
AGCAATAGCTAGTACTATTG+TGG | + | chr2.3:55959846-55959865 | None:intergenic | 35.0% | |
AGGGTTTCATAAGGTGAAAT+GGG | - | chr2.3:55960746-55960765 | MS.gene56030:intron | 35.0% | |
ATAAAACCAGTCAGAGAACT+TGG | + | chr2.3:55961642-55961661 | None:intergenic | 35.0% | |
ATACCAATAAACAAAGCTGC+AGG | + | chr2.3:55962013-55962032 | None:intergenic | 35.0% | |
ATATAAGCTATGATGGCTTG+TGG | - | chr2.3:55960644-55960663 | MS.gene56030:intron | 35.0% | |
ATCAATATTTACCGATCCGA+TGG | - | chr2.3:55962429-55962448 | MS.gene56030:CDS | 35.0% | |
ATGCATTAGGGTATATGTAG+AGG | - | chr2.3:55962906-55962925 | MS.gene56030:CDS | 35.0% | |
CACTTGATGTTGAAATCCTT+TGG | + | chr2.3:55960397-55960416 | None:intergenic | 35.0% | |
CTCACATCTATCTCTGTAAA+AGG | + | chr2.3:55959384-55959403 | None:intergenic | 35.0% | |
CTCTTATCATCAGGAGATAT+CGG | + | chr2.3:55959270-55959289 | None:intergenic | 35.0% | |
GACCCACATATTATGAGTTA+GGG | - | chr2.3:55960842-55960861 | MS.gene56030:intron | 35.0% | |
GATCCCTAACTCATAATATG+TGG | + | chr2.3:55960848-55960867 | None:intergenic | 35.0% | |
GCAATAGCTAGTACTATTGT+GGG | + | chr2.3:55959845-55959864 | None:intergenic | 35.0% | |
GCCTGAAAGGATACAATATT+TGG | - | chr2.3:55962505-55962524 | MS.gene56030:CDS | 35.0% | |
GGAAGATAGAAGAGAATATG+TGG | + | chr2.3:55960082-55960101 | None:intergenic | 35.0% | |
GGATGATTCTAACACAAAAC+TGG | + | chr2.3:55958782-55958801 | None:intergenic | 35.0% | |
GTGGAAGTTGTAACAACATA+TGG | + | chr2.3:55959759-55959778 | None:intergenic | 35.0% | |
GTGTTAGAATCATCCGAAAA+TGG | - | chr2.3:55958787-55958806 | MS.gene56030:CDS | 35.0% | |
TCACCATTATGTGCACAATA+TGG | - | chr2.3:55962833-55962852 | MS.gene56030:CDS | 35.0% | |
TGATCAGTCAGTATTGTTTG+TGG | + | chr2.3:55961542-55961561 | None:intergenic | 35.0% | |
TGCCTGAAAACTCAAATAGA+CGG | + | chr2.3:55962352-55962371 | None:intergenic | 35.0% | |
TGGATCTGATTGCTCAATAA+TGG | - | chr2.3:55962862-55962881 | MS.gene56030:CDS | 35.0% | |
TGTCCATATTGTGCACATAA+TGG | + | chr2.3:55962839-55962858 | None:intergenic | 35.0% | |
TTAGACTTGTACTGAGAAGT+TGG | - | chr2.3:55960580-55960599 | MS.gene56030:intron | 35.0% | |
TTCACATGTTTAAGGAGCAA+AGG | + | chr2.3:55961117-55961136 | None:intergenic | 35.0% | |
TTGATCTCAGTAGAAAACGT+AGG | - | chr2.3:55962801-55962820 | MS.gene56030:CDS | 35.0% | |
! | AAATCCTTTGGGTTTGAAGT+TGG | + | chr2.3:55960385-55960404 | None:intergenic | 35.0% |
! | AATAAACCTTCTGAAGATGG+GGG | - | chr2.3:55959069-55959088 | MS.gene56030:CDS | 35.0% |
! | AATCCTTTGGGTTTGAAGTT+GGG | + | chr2.3:55960384-55960403 | None:intergenic | 35.0% |
! | AATTTTAAACGGCGTTAACG+TGG | - | chr2.3:55960019-55960038 | MS.gene56030:CDS | 35.0% |
! | ATATGCATGTTTGCTAAAGC+TGG | - | chr2.3:55959294-55959313 | MS.gene56030:CDS | 35.0% |
! | CAAAAGGCATGTTTACTTTC+GGG | + | chr2.3:55961602-55961621 | None:intergenic | 35.0% |
! | CCATTAACGTTTTCATCCAA+CGG | - | chr2.3:55961888-55961907 | MS.gene56030:intron | 35.0% |
! | CTTGACAGAATTGTTTCTTC+TGG | + | chr2.3:55958856-55958875 | None:intergenic | 35.0% |
! | GGTGTATTTTATGGCACTAA+TGG | + | chr2.3:55961283-55961302 | None:intergenic | 35.0% |
! | GTGAGATTTTGTGACATGTA+TGG | - | chr2.3:55960521-55960540 | MS.gene56030:intron | 35.0% |
! | TACTGACTGATCATAACACA+TGG | - | chr2.3:55961549-55961568 | MS.gene56030:intron | 35.0% |
! | TGACAGAATTGTTTCTTCTG+GGG | + | chr2.3:55958854-55958873 | None:intergenic | 35.0% |
! | TGATTGCTTGATATTTGGTG+TGG | - | chr2.3:55959803-55959822 | MS.gene56030:CDS | 35.0% |
! | TTCACCTTCTTTCCCATTTT+TGG | - | chr2.3:55960051-55960070 | MS.gene56030:CDS | 35.0% |
!! | AAAGTATGCCGTCTTTTTCA+TGG | - | chr2.3:55959712-55959731 | MS.gene56030:intron | 35.0% |
!! | AAGATTTTGAAGAAAGCTGG+AGG | - | chr2.3:55961732-55961751 | MS.gene56030:intron | 35.0% |
!! | AAGTATGCCGTCTTTTTCAT+GGG | - | chr2.3:55959713-55959732 | MS.gene56030:intron | 35.0% |
!! | ACTTGCTCTAAAAAACGTTC+TGG | + | chr2.3:55961935-55961954 | None:intergenic | 35.0% |
!! | AGGCAAATGGTGGATAAATA+TGG | - | chr2.3:55961752-55961771 | MS.gene56030:intron | 35.0% |
!! | ATGCATGTAAAAAGCACTGT+TGG | - | chr2.3:55961249-55961268 | MS.gene56030:intron | 35.0% |
!! | CTAGAAAAAGGCATCAAACT+TGG | - | chr2.3:55959351-55959370 | MS.gene56030:CDS | 35.0% |
!! | GATGAAAACGTTAATGGACT+CGG | + | chr2.3:55961885-55961904 | None:intergenic | 35.0% |
!! | GATTGCTTGATATTTGGTGT+GGG | - | chr2.3:55959804-55959823 | MS.gene56030:CDS | 35.0% |
!! | GTCTTTTTCATGGGCATTAA+AGG | - | chr2.3:55959722-55959741 | MS.gene56030:intron | 35.0% |
!! | TGCATGTAAAAAGCACTGTT+GGG | - | chr2.3:55961250-55961269 | MS.gene56030:intron | 35.0% |
!! | TGGAAGATTTTGAAGAAAGC+TGG | - | chr2.3:55961729-55961748 | MS.gene56030:intron | 35.0% |
!! | TTTCCTGCAGCTTTGTTTAT+TGG | - | chr2.3:55962007-55962026 | MS.gene56030:CDS | 35.0% |
!!! | CACGCACATTTTTTTTTCCT+AGG | + | chr2.3:55961353-55961372 | None:intergenic | 35.0% |
AAACACTTTGCAACCTCCAT+CGG | + | chr2.3:55962294-55962313 | None:intergenic | 40.0% | |
AACCACAGCGAGATGATTTA+CGG | + | chr2.3:55959116-55959135 | None:intergenic | 40.0% | |
AATGGAATCCGTTGAAACTG+AGG | - | chr2.3:55962550-55962569 | MS.gene56030:CDS | 40.0% | |
AATTCCCAACAGCATGTCAT+AGG | + | chr2.3:55959631-55959650 | None:intergenic | 40.0% | |
ACAACCTTCATCAACCAGAA+AGG | + | chr2.3:55962246-55962265 | None:intergenic | 40.0% | |
ACCAGAAAGGATGCATATTG+AGG | + | chr2.3:55962233-55962252 | None:intergenic | 40.0% | |
ACCTCAATATGCATCCTTTC+TGG | - | chr2.3:55962229-55962248 | MS.gene56030:CDS | 40.0% | |
AGAATCATCCGAAAATGGCA+CGG | - | chr2.3:55958792-55958811 | MS.gene56030:CDS | 40.0% | |
AGTAAGTATAGTGGCAGCAT+GGG | + | chr2.3:55962168-55962187 | None:intergenic | 40.0% | |
ATGACATGCTGTTGGGAATT+TGG | - | chr2.3:55959631-55959650 | MS.gene56030:intron | 40.0% | |
ATGGGAAAGAAGGTGAAATG+GGG | + | chr2.3:55960048-55960067 | None:intergenic | 40.0% | |
ATTTATGCCATGTGATGACC+TGG | + | chr2.3:55962636-55962655 | None:intergenic | 40.0% | |
CAGGGTTTCATAAGGTGAAA+TGG | - | chr2.3:55960745-55960764 | MS.gene56030:intron | 40.0% | |
CATATACGGCTCTTATCATC+AGG | + | chr2.3:55959279-55959298 | None:intergenic | 40.0% | |
CCGTTGGATGAAAACGTTAA+TGG | + | chr2.3:55961891-55961910 | None:intergenic | 40.0% | |
CGACCCACATATTATGAGTT+AGG | - | chr2.3:55960841-55960860 | MS.gene56030:intron | 40.0% | |
CGGATCGGTAAATATTGATC+CGG | + | chr2.3:55962428-55962447 | None:intergenic | 40.0% | |
GACATTATGCAGGCTTTCTT+GGG | - | chr2.3:55961497-55961516 | MS.gene56030:intron | 40.0% | |
GAGCAAAGCAAAAGATGCAA+AGG | - | chr2.3:55962099-55962118 | MS.gene56030:CDS | 40.0% | |
GAGTGAAGAGACTATTCTTC+CGG | + | chr2.3:55961304-55961323 | None:intergenic | 40.0% | |
GATTTGTCTCAGGATGACAT+TGG | - | chr2.3:55958814-55958833 | MS.gene56030:CDS | 40.0% | |
GCTCTACAATTTGGAAATGG+TGG | - | chr2.3:55961709-55961728 | MS.gene56030:intron | 40.0% | |
GGATCGGTAAATATTGATCC+GGG | + | chr2.3:55962427-55962446 | None:intergenic | 40.0% | |
GGCATAAGGAGTAAGTATAG+TGG | + | chr2.3:55962177-55962196 | None:intergenic | 40.0% | |
GGGTTTCATAAGGTGAAATG+GGG | - | chr2.3:55960747-55960766 | MS.gene56030:intron | 40.0% | |
GTGATAGCACCATTGAAACT+TGG | + | chr2.3:55962598-55962617 | None:intergenic | 40.0% | |
TATAGATGAAGGGCCTAATG+TGG | + | chr2.3:55960112-55960131 | None:intergenic | 40.0% | |
TCATCAGTATCTTCTACCTC+TGG | + | chr2.3:55962698-55962717 | None:intergenic | 40.0% | |
TCGGCTCTACAATTTGGAAA+TGG | - | chr2.3:55961706-55961725 | MS.gene56030:intron | 40.0% | |
TGACATTATGCAGGCTTTCT+TGG | - | chr2.3:55961496-55961515 | MS.gene56030:intron | 40.0% | |
TGATTGAATTGATGAGCCGT+AGG | + | chr2.3:55959556-55959575 | None:intergenic | 40.0% | |
TGCAAATCCTCATGATTCCA+TGG | - | chr2.3:55962739-55962758 | MS.gene56030:CDS | 40.0% | |
TGCTTGTGACCAAGTTTCAA+TGG | - | chr2.3:55962586-55962605 | MS.gene56030:CDS | 40.0% | |
TGTGCACAATATGGACATGA+TGG | - | chr2.3:55962842-55962861 | MS.gene56030:CDS | 40.0% | |
TTGAATAAGACGCACCTCAT+TGG | + | chr2.3:55959238-55959257 | None:intergenic | 40.0% | |
TTGAGGCGATATTTCTTTGC+AGG | - | chr2.3:55961839-55961858 | MS.gene56030:intron | 40.0% | |
TTTATGCCATGTGATGACCT+GGG | + | chr2.3:55962635-55962654 | None:intergenic | 40.0% | |
TTTCCAAATTGTAGAGCCGA+TGG | + | chr2.3:55961706-55961725 | None:intergenic | 40.0% | |
! | ACCATTTTCATGGTGCAACT+AGG | - | chr2.3:55962477-55962496 | MS.gene56030:CDS | 40.0% |
! | CCATTTTCATGGTGCAACTA+GGG | - | chr2.3:55962478-55962497 | MS.gene56030:CDS | 40.0% |
! | CTATAGGTGAACCTGTTTTC+AGG | + | chr2.3:55962142-55962161 | None:intergenic | 40.0% |
! | GTTTGCTAAAGCTGGAATGT+CGG | - | chr2.3:55959302-55959321 | MS.gene56030:CDS | 40.0% |
! | TGGCTTGGATTGGACAATAA+TGG | - | chr2.3:55959651-55959670 | MS.gene56030:intron | 40.0% |
! | TTGCATCTTTTGCTTTGCTC+CGG | + | chr2.3:55962099-55962118 | None:intergenic | 40.0% |
!! | AAAAAGCACTGTTGGGGTAT+CGG | - | chr2.3:55961257-55961276 | MS.gene56030:intron | 40.0% |
!! | ATGCTACAGTAGAAGTGTCT+AGG | - | chr2.3:55960976-55960995 | MS.gene56030:intron | 40.0% |
!! | ATGGAGGTTGCAAAGTGTTT+TGG | - | chr2.3:55962294-55962313 | MS.gene56030:CDS | 40.0% |
!! | ATGTCTTGGTTTGTGTGGAA+AGG | - | chr2.3:55961177-55961196 | MS.gene56030:intron | 40.0% |
!! | CAGATTTTGATGTCCCTGAA+TGG | - | chr2.3:55959166-55959185 | MS.gene56030:CDS | 40.0% |
!! | CAGCTGAAACCTTTGAAATC+CGG | + | chr2.3:55960688-55960707 | None:intergenic | 40.0% |
!! | GCATGTAAAAAGCACTGTTG+GGG | - | chr2.3:55961251-55961270 | MS.gene56030:intron | 40.0% |
!! | GTTGATTTTAATGACCGAGC+CGG | - | chr2.3:55962077-55962096 | MS.gene56030:CDS | 40.0% |
!! | GTTGCAGTCTTTTAGAAACG+TGG | - | chr2.3:55959410-55959429 | MS.gene56030:CDS | 40.0% |
!! | TGCCGTCTATTTGAGTTTTC+AGG | - | chr2.3:55962347-55962366 | MS.gene56030:CDS | 40.0% |
!!! | AGACAAATCCGTGCCATTTT+CGG | + | chr2.3:55958803-55958822 | None:intergenic | 40.0% |
!!! | GGTTGATGAAGGTTGTTTTC+AGG | - | chr2.3:55962250-55962269 | MS.gene56030:CDS | 40.0% |
AAACCAGTAACACGCCATTC+AGG | + | chr2.3:55959183-55959202 | None:intergenic | 45.0% | |
AAATGGCACGGATTTGTCTC+AGG | - | chr2.3:55958804-55958823 | MS.gene56030:CDS | 45.0% | |
AACCAGTAACACGCCATTCA+GGG | + | chr2.3:55959182-55959201 | None:intergenic | 45.0% | |
AACCGTAAATCATCTCGCTG+TGG | - | chr2.3:55959111-55959130 | MS.gene56030:CDS | 45.0% | |
AATCCCTCCTTGTTACTCCT+CGG | + | chr2.3:55959020-55959039 | None:intergenic | 45.0% | |
ACAAACCAATGCTTCGCCAT+CGG | + | chr2.3:55962448-55962467 | None:intergenic | 45.0% | |
AGGCAAGCTAAAGGAGAGAA+GGG | - | chr2.3:55962766-55962785 | MS.gene56030:CDS | 45.0% | |
AGTGGAAAGCTGAGTTCCAT+CGG | - | chr2.3:55961687-55961706 | MS.gene56030:intron | 45.0% | |
ATGCTGTTGGGAATTTGGCT+TGG | - | chr2.3:55959636-55959655 | MS.gene56030:intron | 45.0% | |
ATTGTGCACTCAAGAACCGT+TGG | + | chr2.3:55961907-55961926 | None:intergenic | 45.0% | |
CAAAGAGTTCTTCTCCTTCG+CGG | - | chr2.3:55960174-55960193 | MS.gene56030:intron | 45.0% | |
CACGTGTTAAAACTCTTCCC+AGG | - | chr2.3:55962615-55962634 | MS.gene56030:CDS | 45.0% | |
CAGAAAGTCTGCCTGAAAAC+AGG | - | chr2.3:55962128-55962147 | MS.gene56030:CDS | 45.0% | |
CAGTAGCATGCAATCAACCA+TGG | - | chr2.3:55960146-55960165 | MS.gene56030:CDS | 45.0% | |
CATACTTTCATCCCGCAGAA+GGG | + | chr2.3:55959700-55959719 | None:intergenic | 45.0% | |
CCCTAGTTGCACCATGAAAA+TGG | + | chr2.3:55962481-55962500 | None:intergenic | 45.0% | |
CTAAAGCTGGAATGTCGGTA+AGG | - | chr2.3:55959307-55959326 | MS.gene56030:CDS | 45.0% | |
CTTGGGCTTCATGAAAGGAA+AGG | - | chr2.3:55961514-55961533 | MS.gene56030:intron | 45.0% | |
CTTGGTCACAAGCAACATCA+AGG | + | chr2.3:55962580-55962599 | None:intergenic | 45.0% | |
GAATCTAGTAGGCATTCCCT+AGG | - | chr2.3:55961333-55961352 | MS.gene56030:intron | 45.0% | |
GAGTAAGTATAGTGGCAGCA+TGG | + | chr2.3:55962169-55962188 | None:intergenic | 45.0% | |
GAGTACATTGCATGGTCCTA+CGG | - | chr2.3:55959537-55959556 | MS.gene56030:CDS | 45.0% | |
GCTTTCTTGGGCTTCATGAA+AGG | - | chr2.3:55961509-55961528 | MS.gene56030:intron | 45.0% | |
GTACCCAACTTCAAACCCAA+AGG | - | chr2.3:55960378-55960397 | MS.gene56030:intron | 45.0% | |
TCTGGGCTTTACCATTCTTG+AGG | - | chr2.3:55961822-55961841 | MS.gene56030:intron | 45.0% | |
TCTTCCTCTACCACCACATT+AGG | - | chr2.3:55960096-55960115 | MS.gene56030:CDS | 45.0% | |
TGAAGAAAGCTGGAGGCAAA+TGG | - | chr2.3:55961739-55961758 | MS.gene56030:intron | 45.0% | |
TGATACAACCTACCGAGTAG+AGG | - | chr2.3:55959605-55959624 | MS.gene56030:CDS | 45.0% | |
TGGCTGTTACAGATCTGATG+TGG | + | chr2.3:55960796-55960815 | None:intergenic | 45.0% | |
TGGCTGTTACGTGTCTGATA+TGG | - | chr2.3:55959992-55960011 | MS.gene56030:CDS | 45.0% | |
TTATGCCTTGAGCAAACTCC+AGG | - | chr2.3:55962190-55962209 | MS.gene56030:CDS | 45.0% | |
TTCTCTCCAAGTTCTCTGAC+TGG | - | chr2.3:55961633-55961652 | MS.gene56030:intron | 45.0% | |
! | AAGAACTCTTTGGAGAGCCA+TGG | + | chr2.3:55960166-55960185 | None:intergenic | 45.0% |
! | AAGGCGTTCCTCAGTTTCAA+CGG | + | chr2.3:55962561-55962580 | None:intergenic | 45.0% |
! | ATTTAGTGAGGGTGTGAGTG+AGG | + | chr2.3:55960247-55960266 | None:intergenic | 45.0% |
! | TATGATGGCTTGTGGTTGCT+AGG | - | chr2.3:55960652-55960671 | MS.gene56030:intron | 45.0% |
! | TGATGTGGACTAAACCGTGT+CGG | + | chr2.3:55960781-55960800 | None:intergenic | 45.0% |
! | TGGAGTTTGCTCAAGGCATA+AGG | + | chr2.3:55962191-55962210 | None:intergenic | 45.0% |
! | TTTAGTGAGGGTGTGAGTGA+GGG | + | chr2.3:55960246-55960265 | None:intergenic | 45.0% |
!! | GCATCCTTTCTGGTTGATGA+AGG | - | chr2.3:55962239-55962258 | MS.gene56030:CDS | 45.0% |
!! | GTTCCATCGGCTCTACAATT+TGG | - | chr2.3:55961700-55961719 | MS.gene56030:intron | 45.0% |
!! | GTTGGGAATTTGGCTTGGAT+TGG | - | chr2.3:55959641-55959660 | MS.gene56030:intron | 45.0% |
!! | TGAGGTATTTGGTGATGCTG+TGG | - | chr2.3:55959578-55959597 | MS.gene56030:CDS | 45.0% |
AACCTCCATCGGTCTGAGAA+TGG | + | chr2.3:55962283-55962302 | None:intergenic | 50.0% | |
AAGGAGAGAAGGGCAAGAGA+TGG | - | chr2.3:55962776-55962795 | MS.gene56030:CDS | 50.0% | |
ACAGGCTCGAGTACATTGCA+TGG | - | chr2.3:55959529-55959548 | MS.gene56030:CDS | 50.0% | |
ACTCTTCCCAGGTCATCACA+TGG | - | chr2.3:55962626-55962645 | MS.gene56030:CDS | 50.0% | |
AGAAAGCTGGAGGCAAATGG+TGG | - | chr2.3:55961742-55961761 | MS.gene56030:intron | 50.0% | |
AGACACCATTCTCAGACCGA+TGG | - | chr2.3:55962275-55962294 | MS.gene56030:CDS | 50.0% | |
AGAGGCCTATGACATGCTGT+TGG | - | chr2.3:55959623-55959642 | MS.gene56030:intron | 50.0% | |
AGATGAAGGGCCTAATGTGG+TGG | + | chr2.3:55960109-55960128 | None:intergenic | 50.0% | |
CAACTAGGGATCAGCCTGAA+AGG | - | chr2.3:55962492-55962511 | MS.gene56030:CDS | 50.0% | |
CAGCTGATGTGCTCTTGACA+AGG | + | chr2.3:55962323-55962342 | None:intergenic | 50.0% | |
CAGTATCTTCTACCTCTGGC+AGG | + | chr2.3:55962694-55962713 | None:intergenic | 50.0% | |
CGCGAAGGAGAAGAACTCTT+TGG | + | chr2.3:55960176-55960195 | None:intergenic | 50.0% | |
CTTGTGGTTGCTAGGAGGAA+TGG | - | chr2.3:55960660-55960679 | MS.gene56030:intron | 50.0% | |
GAGGCCTATGACATGCTGTT+GGG | - | chr2.3:55959624-55959643 | MS.gene56030:intron | 50.0% | |
GCATACTTTCATCCCGCAGA+AGG | + | chr2.3:55959701-55959720 | None:intergenic | 50.0% | |
GCATGTCATAGGCCTCTACT+CGG | + | chr2.3:55959620-55959639 | None:intergenic | 50.0% | |
GGATTCATTGATCCTGCCAG+AGG | - | chr2.3:55962679-55962698 | MS.gene56030:CDS | 50.0% | |
GTGGCAGCATGGGATTCTAT+AGG | + | chr2.3:55962158-55962177 | None:intergenic | 50.0% | |
TTGGGTCGCAATACGATGAG+TGG | - | chr2.3:55961669-55961688 | MS.gene56030:intron | 50.0% | |
! | AAACCTTCTGAAGATGGGGG+AGG | - | chr2.3:55959072-55959091 | MS.gene56030:CDS | 50.0% |
! | AGGGATTTTACTTGCCACCG+CGG | - | chr2.3:55959033-55959052 | MS.gene56030:CDS | 50.0% |
! | CTCTTCCTGGAGTTTGCTCA+AGG | + | chr2.3:55962198-55962217 | None:intergenic | 50.0% |
! | GGAATGGTGCCGGATTTCAA+AGG | - | chr2.3:55960676-55960695 | MS.gene56030:intron | 50.0% |
! | TCTTTTGCTTTGCTCCGGCT+CGG | + | chr2.3:55962094-55962113 | None:intergenic | 50.0% |
! | TTAGTGAGGGTGTGAGTGAG+GGG | + | chr2.3:55960245-55960264 | None:intergenic | 50.0% |
!! | TATTTTGGGGAAATCCGCCG+CGG | + | chr2.3:55959053-55959072 | None:intergenic | 50.0% |
AGGGCCTAATGTGGTGGTAG+AGG | + | chr2.3:55960103-55960122 | None:intergenic | 55.0% | |
CACCATTCTCAGACCGATGG+AGG | - | chr2.3:55962278-55962297 | MS.gene56030:CDS | 55.0% | |
CCAATGCTTCGCCATCGGAT+CGG | + | chr2.3:55962443-55962462 | None:intergenic | 55.0% | |
CTTCCATGTTGTCACCGCGA+AGG | + | chr2.3:55960191-55960210 | None:intergenic | 55.0% | |
CTTCGCGGTGACAACATGGA+AGG | - | chr2.3:55960189-55960208 | MS.gene56030:intron | 55.0% | |
CTTTAGTTGCGCCCTTCTGC+GGG | - | chr2.3:55959686-55959705 | MS.gene56030:intron | 55.0% | |
GCTTTAGTTGCGCCCTTCTG+CGG | - | chr2.3:55959685-55959704 | MS.gene56030:intron | 55.0% | |
GGATGACATTGGCACTGTCG+AGG | - | chr2.3:55958825-55958844 | MS.gene56030:CDS | 55.0% | |
GTCATAGGCCTCTACTCGGT+AGG | + | chr2.3:55959616-55959635 | None:intergenic | 55.0% | |
GTCCCTGAATGGCGTGTTAC+TGG | - | chr2.3:55959177-55959196 | MS.gene56030:CDS | 55.0% | |
GTGGAAAGGACCCGAGTCAT+CGG | - | chr2.3:55961191-55961210 | MS.gene56030:intron | 55.0% | |
GTTGCTAGGAGGAATGGTGC+CGG | - | chr2.3:55960666-55960685 | MS.gene56030:intron | 55.0% | |
TCTCCTTCGCGGTGACAACA+TGG | - | chr2.3:55960185-55960204 | MS.gene56030:intron | 55.0% | |
TGGAAAGGACCCGAGTCATC+GGG | - | chr2.3:55961192-55961211 | MS.gene56030:intron | 55.0% | |
TGGCCGAGGAGTAACAAGGA+GGG | - | chr2.3:55959014-55959033 | MS.gene56030:CDS | 55.0% | |
TTGGCCGAGGAGTAACAAGG+AGG | - | chr2.3:55959013-55959032 | MS.gene56030:CDS | 55.0% | |
! | GATGGCTTGTGGTTGCTAGG+AGG | - | chr2.3:55960655-55960674 | MS.gene56030:intron | 55.0% |
! | GATTTTACTTGCCACCGCGG+CGG | - | chr2.3:55959036-55959055 | MS.gene56030:CDS | 55.0% |
! | GGACTCGGTCTGACATGTAC+TGG | + | chr2.3:55961870-55961889 | None:intergenic | 55.0% |
! | GTGCTGCAACTAGCTCTTCC+TGG | + | chr2.3:55962211-55962230 | None:intergenic | 55.0% |
! | TAGTGAGGGTGTGAGTGAGG+GGG | + | chr2.3:55960244-55960263 | None:intergenic | 55.0% |
ACCACATGCCCCGATGACTC+GGG | + | chr2.3:55961204-55961223 | None:intergenic | 60.0% | |
ACCCGAGGGAAAGATGGGGT+TGG | - | chr2.3:55958994-55959013 | MS.gene56030:CDS | 60.0% | |
ACCGCACCCGAGGGAAAGAT+GGG | - | chr2.3:55958989-55959008 | MS.gene56030:CDS | 60.0% | |
ATTAGACGACACCGCACCCG+AGG | - | chr2.3:55958979-55958998 | MS.gene56030:CDS | 60.0% | |
CCGATCCGATGGCGAAGCAT+TGG | - | chr2.3:55962440-55962459 | MS.gene56030:CDS | 60.0% | |
CCTCCTCCCCCATCTTCAGA+AGG | + | chr2.3:55959078-55959097 | None:intergenic | 60.0% | |
GACCACATGCCCCGATGACT+CGG | + | chr2.3:55961205-55961224 | None:intergenic | 60.0% | |
GCCAACCCCATCTTTCCCTC+GGG | + | chr2.3:55958998-55959017 | None:intergenic | 60.0% | |
GGAAAGGACCCGAGTCATCG+GGG | - | chr2.3:55961193-55961212 | MS.gene56030:intron | 60.0% | |
GGCCAACCCCATCTTTCCCT+CGG | + | chr2.3:55958999-55959018 | None:intergenic | 60.0% | |
TTAGACGACACCGCACCCGA+GGG | - | chr2.3:55958980-55958999 | MS.gene56030:CDS | 60.0% | |
! | CCTTCTGAAGATGGGGGAGG+AGG | - | chr2.3:55959075-55959094 | MS.gene56030:CDS | 60.0% |
! | GGGGAGGAGGAAAAGCGCAA+AGG | - | chr2.3:55959088-55959107 | MS.gene56030:CDS | 60.0% |
! | TGGACTAAACCGTGTCGGCG+TGG | + | chr2.3:55960776-55960795 | None:intergenic | 60.0% |
!! | GGGTTGGCCGAGGAGTAACA+AGG | - | chr2.3:55959010-55959029 | MS.gene56030:CDS | 60.0% |
ACCCGAGTCATCGGGGCATG+TGG | - | chr2.3:55961200-55961219 | MS.gene56030:intron | 65.0% | |
ATGGGGAAGCCACGCCGACA+CGG | - | chr2.3:55960764-55960783 | MS.gene56030:intron | 65.0% | |
CACCGCACCCGAGGGAAAGA+TGG | - | chr2.3:55958988-55959007 | MS.gene56030:CDS | 65.0% | |
CCCCATCTTTCCCTCGGGTG+CGG | + | chr2.3:55958993-55959012 | None:intergenic | 65.0% | |
CCGCACCCGAGGGAAAGATG+GGG | - | chr2.3:55958990-55959009 | MS.gene56030:CDS | 65.0% | |
TTTGGGGAAATCCGCCGCGG+TGG | + | chr2.3:55959050-55959069 | None:intergenic | 65.0% | |
! | GAGGGTGTGAGTGAGGGGGT+TGG | + | chr2.3:55960240-55960259 | None:intergenic | 65.0% |
!! | GGGAAAGATGGGGTTGGCCG+AGG | - | chr2.3:55959000-55959019 | MS.gene56030:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 55958766 | 55962925 | 55958766 | ID=MS.gene56030 |
chr2.3 | mRNA | 55958766 | 55962925 | 55958766 | ID=MS.gene56030.t1;Parent=MS.gene56030 |
chr2.3 | exon | 55961948 | 55962925 | 55961948 | ID=MS.gene56030.t1.exon1;Parent=MS.gene56030.t1 |
chr2.3 | CDS | 55961948 | 55962925 | 55961948 | ID=cds.MS.gene56030.t1;Parent=MS.gene56030.t1 |
chr2.3 | exon | 55959739 | 55960182 | 55959739 | ID=MS.gene56030.t1.exon2;Parent=MS.gene56030.t1 |
chr2.3 | CDS | 55959739 | 55960182 | 55959739 | ID=cds.MS.gene56030.t1;Parent=MS.gene56030.t1 |
chr2.3 | exon | 55958766 | 55959626 | 55958766 | ID=MS.gene56030.t1.exon3;Parent=MS.gene56030.t1 |
chr2.3 | CDS | 55958766 | 55959626 | 55958766 | ID=cds.MS.gene56030.t1;Parent=MS.gene56030.t1 |
Gene Sequence |
Protein sequence |