Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56349.t1 | AES68622.2 | 77.3 | 594 | 79 | 6 | 4 | 597 | 2 | 539 | 6.90E-253 | 883.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56349.t1 | G7IVI4 | 77.3 | 594 | 79 | 6 | 4 | 597 | 2 | 539 | 5.0e-253 | 883.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051720 | MS.gene56349 | 0.807354 | 5.27E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene56349 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene56349 | 0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene56349 | 0.803996 | 2.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56349.t1 | MTR_3g010860 | 77.946 | 594 | 75 | 6 | 4 | 597 | 2 | 539 | 0.0 | 919 |
| MS.gene56349.t1 | MTR_3g010890 | 70.349 | 172 | 24 | 1 | 196 | 367 | 1 | 145 | 3.69e-79 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTCCATATCCACTTTA+TGG | 0.076729 | 3.1:+6749780 | None:intergenic |
| TTTATTCTTGCTGACTCTTT+TGG | 0.220128 | 3.1:+6749563 | None:intergenic |
| GTTTGACCCGATTGGAGTTT+TGG | 0.222197 | 3.1:-6753044 | MS.gene56349:CDS |
| ATAAAGAAGTTCAGTGTATT+TGG | 0.231819 | 3.1:-6749365 | MS.gene56349:CDS |
| TTCGAAAAGGTGACATAGTT+TGG | 0.252992 | 3.1:-6753381 | MS.gene56349:CDS |
| CGTTCTGCACTTAGGTTATT+TGG | 0.257181 | 3.1:-6753151 | MS.gene56349:CDS |
| AAGGTGCGTTGTGGGGTGTT+AGG | 0.262813 | 3.1:+6753250 | None:intergenic |
| TTTATTAACTGTTCCTTTGA+TGG | 0.266375 | 3.1:+6749383 | None:intergenic |
| CCTTAAGCCCATTCCACATT+TGG | 0.272294 | 3.1:-6750234 | MS.gene56349:CDS |
| CTTAAGCCCATTCCACATTT+GGG | 0.282277 | 3.1:-6750233 | MS.gene56349:CDS |
| CTTCTTTGTAGAGTTTCTTC+TGG | 0.284374 | 3.1:+6752909 | None:intergenic |
| GTGAAGATTATGCTAGTTTC+AGG | 0.284969 | 3.1:+6749812 | None:intergenic |
| TGATGGTAGGTTGAAATTCT+TGG | 0.296686 | 3.1:+6749400 | None:intergenic |
| ACCAAACCATACCTTTCTTT+TGG | 0.308445 | 3.1:+6749244 | None:intergenic |
| TACAAAGAAGCTACAAAATT+AGG | 0.312714 | 3.1:-6752896 | MS.gene56349:intron |
| GATGGTAGGTTGAAATTCTT+GGG | 0.313799 | 3.1:+6749401 | None:intergenic |
| CTCAGTTACTCGAGAATCTA+TGG | 0.338466 | 3.1:-6750455 | MS.gene56349:CDS |
| CAACGATTGGTCTCCGGCTT+TGG | 0.345750 | 3.1:-6753320 | MS.gene56349:CDS |
| GTGCTGACTGCACTGATTAT+AGG | 0.353650 | 3.1:-6748725 | MS.gene56349:CDS |
| AACCTCGGATTCGACGAAAA+AGG | 0.354312 | 3.1:+6753231 | None:intergenic |
| GTTCAGAAATGTAGAACAAA+TGG | 0.356017 | 3.1:+6749433 | None:intergenic |
| ACTCATTTGGTCGATTATAT+CGG | 0.361192 | 3.1:-6750076 | MS.gene56349:CDS |
| GAAGCCAACAGTTCCTGATT+TGG | 0.362711 | 3.1:-6750353 | MS.gene56349:CDS |
| TGAGGTCCATAAAGTGGATA+TGG | 0.363415 | 3.1:-6749786 | MS.gene56349:CDS |
| TCGATACCCAATTTAAAAGT+TGG | 0.371331 | 3.1:-6749479 | MS.gene56349:CDS |
| GGACATAAAGCATGTTTATC+TGG | 0.374770 | 3.1:+6749968 | None:intergenic |
| AGGTGCGTTGTGGGGTGTTA+GGG | 0.377797 | 3.1:+6753251 | None:intergenic |
| GTAGAGTTTCTTCTGGTGAA+TGG | 0.379406 | 3.1:+6752916 | None:intergenic |
| TTCCGACTTCAAGACTCATT+TGG | 0.383976 | 3.1:-6750089 | MS.gene56349:CDS |
| AGAGAATGTCCTTCCAAATC+AGG | 0.407399 | 3.1:+6750340 | None:intergenic |
| TTGCGGTGTCTTTGCATAAC+GGG | 0.413384 | 3.1:-6753109 | MS.gene56349:CDS |
| ACAAGAAGCAACATATTGAT+AGG | 0.415947 | 3.1:+6749502 | None:intergenic |
| TTAAAAGTTGGAGAGCAATC+AGG | 0.420947 | 3.1:-6749467 | MS.gene56349:CDS |
| CCAAATGTGGAATGGGCTTA+AGG | 0.421130 | 3.1:+6750234 | None:intergenic |
| CATATAGTGGTTTCTATGTC+AGG | 0.421269 | 3.1:+6750013 | None:intergenic |
| TCGAAAAGGTGACATAGTTT+GGG | 0.422847 | 3.1:-6753380 | MS.gene56349:CDS |
| CCACTGGTAGTTGGAACCTC+TGG | 0.437260 | 3.1:+6750286 | None:intergenic |
| TTGTTACACTGGCTCAGCTC+AGG | 0.437997 | 3.1:-6749312 | MS.gene56349:CDS |
| TCAGAATTGTTTCGAGTTTG+CGG | 0.438255 | 3.1:-6753126 | MS.gene56349:CDS |
| TCTTTCCCCAAATGTGGAAT+GGG | 0.445797 | 3.1:+6750227 | None:intergenic |
| AACTTAGTTGCAGCCTCTCC+TGG | 0.448647 | 3.1:+6749618 | None:intergenic |
| ACAAAACCCAAAACTCCAAT+CGG | 0.453480 | 3.1:+6753037 | None:intergenic |
| TTAACTGTTCCTTTGATGGT+AGG | 0.461756 | 3.1:+6749387 | None:intergenic |
| TTTGCGGTGTCTTTGCATAA+CGG | 0.479178 | 3.1:-6753110 | MS.gene56349:CDS |
| TTCTTTCCCCAAATGTGGAA+TGG | 0.482297 | 3.1:+6750226 | None:intergenic |
| GAGTGAGATGCCGAGGTGGC+TGG | 0.483845 | 3.1:+6753288 | None:intergenic |
| AAGTATTCGAAAAGACAATC+TGG | 0.485191 | 3.1:-6749849 | MS.gene56349:CDS |
| CTGGAAGATGTGACCAAAGC+CGG | 0.488329 | 3.1:+6753307 | None:intergenic |
| GGTTATCAGTTTGACCCGAT+TGG | 0.490496 | 3.1:-6753052 | MS.gene56349:CDS |
| GTCGATTATATCGGTGAAAG+AGG | 0.494744 | 3.1:-6750067 | MS.gene56349:CDS |
| TTCTGCGGATCGTTTGTTAG+AGG | 0.495114 | 3.1:-6749534 | MS.gene56349:CDS |
| CCTTCCAAATCAGGAACTGT+TGG | 0.502720 | 3.1:+6750349 | None:intergenic |
| ATCTAACTCTTCTGTTTACC+AGG | 0.505522 | 3.1:-6749636 | MS.gene56349:CDS |
| CAATCTTCTTATAGCACCAA+TGG | 0.505651 | 3.1:+6750375 | None:intergenic |
| TTCAGAAATGTAGAACAAAT+GGG | 0.509304 | 3.1:+6749434 | None:intergenic |
| TCAGCTTTACCACTGGTAGT+TGG | 0.510578 | 3.1:+6750277 | None:intergenic |
| TAGCCTCATGATTATCAGAA+TGG | 0.511698 | 3.1:+6749693 | None:intergenic |
| GAAGGAAAGAAGCATGAGAA+AGG | 0.516021 | 3.1:-6753404 | None:intergenic |
| TCATCTCCTAGTTTAGCGTC+TGG | 0.519441 | 3.1:-6749719 | MS.gene56349:CDS |
| CACTGATGAGGTCCATAAAG+TGG | 0.520491 | 3.1:-6749792 | MS.gene56349:CDS |
| AAGCGTTCCGTTCTGCACTT+AGG | 0.520680 | 3.1:-6753159 | MS.gene56349:CDS |
| TCTGCGGATCGTTTGTTAGA+GGG | 0.522091 | 3.1:-6749533 | MS.gene56349:CDS |
| ATTCACATGTAAAAGACTGT+TGG | 0.523862 | 3.1:+6749741 | None:intergenic |
| ATGTGGAATGGGCTTAAGGC+AGG | 0.528234 | 3.1:+6750238 | None:intergenic |
| TGGAAGCCAGACGCTAAACT+AGG | 0.529369 | 3.1:+6749713 | None:intergenic |
| CGAAAGGGTAATTCATCGAA+GGG | 0.537470 | 3.1:+6753205 | None:intergenic |
| TTACACTGGCTCAGCTCAGG+TGG | 0.537648 | 3.1:-6749309 | MS.gene56349:CDS |
| CAACAACAACGATTGGTCTC+CGG | 0.538740 | 3.1:-6753326 | MS.gene56349:CDS |
| AAAGGTATCGTCATTTCGAA+AGG | 0.539471 | 3.1:+6753189 | None:intergenic |
| TCTTGAGCTCTGCAAAGTTG+AGG | 0.544614 | 3.1:+6749947 | None:intergenic |
| AGCATGAGAAAGGTTCGAAA+AGG | 0.546119 | 3.1:-6753394 | MS.gene56349:CDS |
| ACAATGCAGCTTATGAACCT+TGG | 0.547441 | 3.1:-6748789 | MS.gene56349:intron |
| GTACTGATGTGTGAGATCCT+AGG | 0.551189 | 3.1:+6749887 | None:intergenic |
| AAGGTATCGTCATTTCGAAA+GGG | 0.552066 | 3.1:+6753190 | None:intergenic |
| ACGGAACGCTTCACATTGAA+AGG | 0.553007 | 3.1:+6753171 | None:intergenic |
| TCGAAAGGGTAATTCATCGA+AGG | 0.554318 | 3.1:+6753204 | None:intergenic |
| GCACACGAAGCCTCAACCCA+AGG | 0.555269 | 3.1:+6752992 | None:intergenic |
| GTCACATCTTCCAGCCACCT+CGG | 0.557130 | 3.1:-6753298 | MS.gene56349:CDS |
| TTAGATTCTTTCCCCAAATG+TGG | 0.557194 | 3.1:+6750221 | None:intergenic |
| GAAAGAATCTAAAATTTGAA+AGG | 0.557568 | 3.1:-6750210 | MS.gene56349:CDS |
| GGGTCATAACGAAGAGGAGA+GGG | 0.567565 | 3.1:-6753089 | MS.gene56349:CDS |
| GGCAACCTAGAGAAAAGCCT+TGG | 0.571018 | 3.1:+6750034 | None:intergenic |
| GATAATCATGAGGCTAATGC+CGG | 0.573850 | 3.1:-6749686 | MS.gene56349:CDS |
| GAGTTTCTTCTGGTGAATGG+TGG | 0.577348 | 3.1:+6752919 | None:intergenic |
| ATCTATGGCGATAGAACCCA+AGG | 0.577922 | 3.1:-6750440 | MS.gene56349:CDS |
| GAATTTCAACCTACCATCAA+AGG | 0.580977 | 3.1:-6749396 | MS.gene56349:CDS |
| ATGAGTCTTGAAGTCGGAAG+CGG | 0.581253 | 3.1:+6750093 | None:intergenic |
| AAAGAGTTCAGCTTTACCAC+TGG | 0.582690 | 3.1:+6750270 | None:intergenic |
| ATATCAATATGCCAAAAGAA+AGG | 0.583824 | 3.1:-6749255 | MS.gene56349:intron |
| TTAAGCCCATTCCACATTTG+GGG | 0.584028 | 3.1:-6750232 | MS.gene56349:CDS |
| ACTCTTCTGTTTACCAGGAG+AGG | 0.585563 | 3.1:-6749631 | MS.gene56349:CDS |
| CAAAACCCAAAACTCCAATC+GGG | 0.590229 | 3.1:+6753038 | None:intergenic |
| AGTTTCAGGAAAGTGTATGC+AGG | 0.591837 | 3.1:+6749826 | None:intergenic |
| TCTCAAGAAATACTAAACCT+AGG | 0.592780 | 3.1:-6749904 | MS.gene56349:CDS |
| CCAACAGTTCCTGATTTGGA+AGG | 0.609446 | 3.1:-6750349 | MS.gene56349:CDS |
| GAGTAGCATCTGACTCAAAG+AGG | 0.612627 | 3.1:+6750477 | None:intergenic |
| TTCATCGAAGGGAATAACCT+CGG | 0.618352 | 3.1:+6753216 | None:intergenic |
| TAGCATAATCTTCACTGATG+AGG | 0.627648 | 3.1:-6749804 | MS.gene56349:CDS |
| AGGCTGCAACTAAGTTGTGA+TGG | 0.635801 | 3.1:-6749611 | MS.gene56349:CDS |
| CTTCCATTCTGATAATCATG+AGG | 0.635887 | 3.1:-6749696 | MS.gene56349:CDS |
| ATGGTAGGTTGAAATTCTTG+GGG | 0.638122 | 3.1:+6749402 | None:intergenic |
| ATCAGGTCATATCTGACCGA+GGG | 0.640083 | 3.1:-6750411 | MS.gene56349:CDS |
| GATCTCTATTCAATGAACCA+AGG | 0.642948 | 3.1:+6748772 | None:intergenic |
| GACCAAATGAGTCTTGAAGT+CGG | 0.648590 | 3.1:+6750087 | None:intergenic |
| AGAATGAGAGTGAGATGCCG+AGG | 0.658547 | 3.1:+6753281 | None:intergenic |
| CAAATAACCTAAGTGCAGAA+CGG | 0.664388 | 3.1:+6753152 | None:intergenic |
| CCAGAGGTTCCAACTACCAG+TGG | 0.669521 | 3.1:-6750286 | MS.gene56349:CDS |
| CGGGTCATAACGAAGAGGAG+AGG | 0.685231 | 3.1:-6753090 | MS.gene56349:CDS |
| CATCAGGTCATATCTGACCG+AGG | 0.696941 | 3.1:-6750412 | MS.gene56349:CDS |
| ATGAGAGTGAGATGCCGAGG+TGG | 0.718497 | 3.1:+6753284 | None:intergenic |
| CATAACGGGTCATAACGAAG+AGG | 0.722419 | 3.1:-6753095 | MS.gene56349:CDS |
| AAAGAGGAGACAATGTACCA+AGG | 0.732791 | 3.1:-6750051 | MS.gene56349:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAATATATTTTTAAATCT+CGG | + | chr3.1:6751914-6751933 | None:intergenic | 10.0% |
| !!! | TTCTTTTCTTTTTTTTTTAA+CGG | + | chr3.1:6750836-6750855 | None:intergenic | 10.0% |
| !! | TTAATAAAATAGAGTATAGT+TGG | - | chr3.1:6750047-6750066 | MS.gene56349:CDS | 15.0% |
| !! | TTTAAAAATATATTAGAGCA+TGG | - | chr3.1:6751917-6751936 | MS.gene56349:intron | 15.0% |
| !!! | AAATTAAAGTATTATTTCCA+CGG | + | chr3.1:6753201-6753220 | None:intergenic | 15.0% |
| !!! | AAGTTTTTAATATCAAACAT+AGG | + | chr3.1:6751548-6751567 | None:intergenic | 15.0% |
| !!! | ATATTTTCCATTTCAAATTA+TGG | + | chr3.1:6751455-6751474 | None:intergenic | 15.0% |
| !!! | TTCTTGTTTAACAATTTTTT+GGG | - | chr3.1:6751222-6751241 | MS.gene56349:intron | 15.0% |
| !! | AAAGCAATAAAATTCAAGAA+AGG | + | chr3.1:6749969-6749988 | None:intergenic | 20.0% |
| !! | AAGCAATAAAATTCAAGAAA+GGG | + | chr3.1:6749968-6749987 | None:intergenic | 20.0% |
| !! | ACATGCTTAAAACAATAAAT+TGG | + | chr3.1:6753066-6753085 | None:intergenic | 20.0% |
| !! | ATGATATTAAATAAAGCTGT+TGG | + | chr3.1:6753135-6753154 | None:intergenic | 20.0% |
| !! | TGTTTGATATTAAAAACTTC+TGG | - | chr3.1:6751549-6751568 | MS.gene56349:intron | 20.0% |
| !! | TTCATTAACCATAGTAAAAA+AGG | + | chr3.1:6753110-6753129 | None:intergenic | 20.0% |
| !! | TTTGATAAAAAGGAAAAGTT+GGG | + | chr3.1:6751248-6751267 | None:intergenic | 20.0% |
| !!! | AAGAATAAAATCATTTTCTG+CGG | - | chr3.1:6752540-6752559 | MS.gene56349:intron | 20.0% |
| !!! | ATATATTTTTAAATCTCGGA+CGG | + | chr3.1:6751910-6751929 | None:intergenic | 20.0% |
| !!! | CAAATTTTGACTTTTATACA+TGG | - | chr3.1:6749540-6749559 | MS.gene56349:CDS | 20.0% |
| !!! | GAAAGAATCTAAAATTTGAA+AGG | - | chr3.1:6751879-6751898 | MS.gene56349:intron | 20.0% |
| !!! | GTACTAAGTTTTTTTTGATA+AGG | + | chr3.1:6749998-6750017 | None:intergenic | 20.0% |
| !!! | GTACTTTGTTTTTAATCTTT+TGG | - | chr3.1:6749215-6749234 | MS.gene56349:intron | 20.0% |
| !!! | GTTCTTGTTTAACAATTTTT+TGG | - | chr3.1:6751221-6751240 | MS.gene56349:intron | 20.0% |
| !!! | TCTTTATTCCTTTTTTACTA+TGG | - | chr3.1:6753099-6753118 | MS.gene56349:CDS | 20.0% |
| !!! | TTATGTTTTCCTTTTTGTAA+GGG | - | chr3.1:6750633-6750652 | MS.gene56349:intron | 20.0% |
| !!! | TTTATGTTTTCCTTTTTGTA+AGG | - | chr3.1:6750632-6750651 | MS.gene56349:intron | 20.0% |
| ! | AAAACAGAAAGAAACATTGT+AGG | - | chr3.1:6753010-6753029 | MS.gene56349:CDS | 25.0% |
| ! | AAACAGAAAGAAACATTGTA+GGG | - | chr3.1:6753011-6753030 | MS.gene56349:CDS | 25.0% |
| ! | ATAAAGAAGTTCAGTGTATT+TGG | - | chr3.1:6752724-6752743 | MS.gene56349:intron | 25.0% |
| ! | ATAGAGGAAATAAAAGAGTT+AGG | - | chr3.1:6750311-6750330 | MS.gene56349:CDS | 25.0% |
| ! | ATATCAATATGCCAAAAGAA+AGG | - | chr3.1:6752834-6752853 | MS.gene56349:intron | 25.0% |
| ! | GCTTAATTATGTCAAGAAAA+TGG | + | chr3.1:6751512-6751531 | None:intergenic | 25.0% |
| ! | GTTTGATAAAAAGGAAAAGT+TGG | + | chr3.1:6751249-6751268 | None:intergenic | 25.0% |
| ! | TACAAAGAAGCTACAAAATT+AGG | - | chr3.1:6749193-6749212 | MS.gene56349:intron | 25.0% |
| ! | TGTGATCAAGTTTGATAAAA+AGG | + | chr3.1:6751258-6751277 | None:intergenic | 25.0% |
| ! | TTAAGATGATTTCACAGAAA+TGG | - | chr3.1:6750399-6750418 | MS.gene56349:CDS | 25.0% |
| ! | TTAGTACTACTAAACAACAA+TGG | - | chr3.1:6750011-6750030 | MS.gene56349:CDS | 25.0% |
| ! | TTCAGAAATGTAGAACAAAT+GGG | + | chr3.1:6752658-6752677 | None:intergenic | 25.0% |
| ! | TTTATTAACTGTTCCTTTGA+TGG | + | chr3.1:6752709-6752728 | None:intergenic | 25.0% |
| !! | AATAATCCAACATAGAGTTT+TGG | + | chr3.1:6750083-6750102 | None:intergenic | 25.0% |
| !! | ATTAGCTCTCAAAAAAATGT+GGG | + | chr3.1:6749252-6749271 | None:intergenic | 25.0% |
| !! | CATACTAAAGTACTACTAAA+CGG | - | chr3.1:6749628-6749647 | MS.gene56349:CDS | 25.0% |
| !! | TATGTTTTCCTTTTTGTAAG+GGG | - | chr3.1:6750634-6750653 | MS.gene56349:intron | 25.0% |
| !! | TATTAGCTCTCAAAAAAATG+TGG | + | chr3.1:6749253-6749272 | None:intergenic | 25.0% |
| !! | TTTTATCAAACTTGATCACA+CGG | - | chr3.1:6751258-6751277 | MS.gene56349:intron | 25.0% |
| !!! | AGAAATAGATTTGTTGATGA+TGG | - | chr3.1:6750852-6750871 | MS.gene56349:intron | 25.0% |
| !!! | TAAACTTTTGATTATTCCAG+AGG | - | chr3.1:6751787-6751806 | MS.gene56349:intron | 25.0% |
| AAAATCCAATTCCTTGAAAC+AGG | - | chr3.1:6752987-6753006 | MS.gene56349:CDS | 30.0% | |
| AACTTCTGGTGTTTATCATT+AGG | - | chr3.1:6751563-6751582 | MS.gene56349:intron | 30.0% | |
| AAGTATTCGAAAAGACAATC+TGG | - | chr3.1:6752240-6752259 | MS.gene56349:intron | 30.0% | |
| AATATGCCAAAAGAAAGGTA+TGG | - | chr3.1:6752839-6752858 | MS.gene56349:intron | 30.0% | |
| AATTCGAACTCGTTCTTAAA+AGG | - | chr3.1:6749822-6749841 | MS.gene56349:CDS | 30.0% | |
| ACAAAATTGATAAGAGCCTA+AGG | - | chr3.1:6749485-6749504 | MS.gene56349:CDS | 30.0% | |
| ACAAGAAGCAACATATTGAT+AGG | + | chr3.1:6752590-6752609 | None:intergenic | 30.0% | |
| ACAATGGTTAAATCAGATAG+AGG | - | chr3.1:6750295-6750314 | MS.gene56349:CDS | 30.0% | |
| ACTCATTTGGTCGATTATAT+CGG | - | chr3.1:6752013-6752032 | MS.gene56349:intron | 30.0% | |
| AGACATTCTTTAGACAACTA+AGG | + | chr3.1:6749722-6749741 | None:intergenic | 30.0% | |
| AGTCATGTCTTTACTATGAA+TGG | - | chr3.1:6750444-6750463 | MS.gene56349:CDS | 30.0% | |
| ATCAATGTCAGAAAACATGT+TGG | + | chr3.1:6749602-6749621 | None:intergenic | 30.0% | |
| ATCTTTCCATATCCACTTTA+TGG | + | chr3.1:6752312-6752331 | None:intergenic | 30.0% | |
| ATTCACATGTAAAAGACTGT+TGG | + | chr3.1:6752351-6752370 | None:intergenic | 30.0% | |
| CCAATCAGATTTATGTACAA+TGG | - | chr3.1:6750279-6750298 | MS.gene56349:CDS | 30.0% | |
| CCATTGTACATAAATCTGAT+TGG | + | chr3.1:6750282-6750301 | None:intergenic | 30.0% | |
| CGATCATCCATAATTTGAAA+TGG | - | chr3.1:6751445-6751464 | MS.gene56349:intron | 30.0% | |
| GTGTGTATACTTATGTATTG+AGG | - | chr3.1:6750483-6750502 | MS.gene56349:CDS | 30.0% | |
| GTTCAGAAATGTAGAACAAA+TGG | + | chr3.1:6752659-6752678 | None:intergenic | 30.0% | |
| TATGGGATGTATAATTGGTT+GGG | - | chr3.1:6750241-6750260 | MS.gene56349:CDS | 30.0% | |
| TCCTACCTAGAAACATATAA+CGG | - | chr3.1:6751377-6751396 | MS.gene56349:intron | 30.0% | |
| TCGATACCCAATTTAAAAGT+TGG | - | chr3.1:6752610-6752629 | MS.gene56349:intron | 30.0% | |
| TCTCAAGAAATACTAAACCT+AGG | - | chr3.1:6752185-6752204 | MS.gene56349:intron | 30.0% | |
| TTCTTACCAAAACTCTATGT+TGG | - | chr3.1:6750074-6750093 | MS.gene56349:CDS | 30.0% | |
| TTTATCAAACTTGATCACAC+GGG | - | chr3.1:6751259-6751278 | MS.gene56349:intron | 30.0% | |
| TTTCTTCGTTTGTGTTCAAA+AGG | + | chr3.1:6752898-6752917 | None:intergenic | 30.0% | |
| ! | ATAGAGATAGATTTTGCGTT+GGG | - | chr3.1:6750211-6750230 | MS.gene56349:CDS | 30.0% |
| ! | TATAGAGATAGATTTTGCGT+TGG | - | chr3.1:6750210-6750229 | MS.gene56349:CDS | 30.0% |
| ! | TATTATTTCCACGGTTTGTT+TGG | + | chr3.1:6753192-6753211 | None:intergenic | 30.0% |
| ! | TGCTCTCCAACTTTTAAATT+GGG | + | chr3.1:6752619-6752638 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTTGTTATGA+GGG | + | chr3.1:6748751-6748770 | None:intergenic | 30.0% |
| ! | TTGCTCTCCAACTTTTAAAT+TGG | + | chr3.1:6752620-6752639 | None:intergenic | 30.0% |
| ! | TTGTTGTTGTTGTTGTTATG+AGG | + | chr3.1:6748752-6748771 | None:intergenic | 30.0% |
| !! | TTGAAATACCCTTTTTGGAA+CGG | + | chr3.1:6749682-6749701 | None:intergenic | 30.0% |
| !! | TTTTTCAGACATGATTTCAG+AGG | + | chr3.1:6752970-6752989 | None:intergenic | 30.0% |
| !!! | AACTAAGGTTCTAGAACTTT+TGG | + | chr3.1:6749707-6749726 | None:intergenic | 30.0% |
| !!! | TCAGATTTTAACTACAGAGA+AGG | + | chr3.1:6753394-6753413 | None:intergenic | 30.0% |
| !!! | TGGTTTTGAAATACCCTTTT+TGG | + | chr3.1:6749687-6749706 | None:intergenic | 30.0% |
| !!! | TTAGGTTCTGTTTTGATAGT+TGG | - | chr3.1:6749872-6749891 | MS.gene56349:CDS | 30.0% |
| !!! | TTTATTCTTGCTGACTCTTT+TGG | + | chr3.1:6752529-6752548 | None:intergenic | 30.0% |
| AAAACTCGGTTGAAATTGTG+TGG | + | chr3.1:6751316-6751335 | None:intergenic | 35.0% | |
| AAGCTAGCAAAAACTGTCTT+TGG | + | chr3.1:6749854-6749873 | None:intergenic | 35.0% | |
| AATAGGTTGCAACAAGCTAA+CGG | - | chr3.1:6749784-6749803 | MS.gene56349:CDS | 35.0% | |
| ACAAAACCCAAAACTCCAAT+CGG | + | chr3.1:6749055-6749074 | None:intergenic | 35.0% | |
| ACAACAACAACAACAACGAT+TGG | - | chr3.1:6748756-6748775 | MS.gene56349:CDS | 35.0% | |
| AGCAAAGAAGTAGAACCATA+CGG | - | chr3.1:6751192-6751211 | MS.gene56349:intron | 35.0% | |
| AGCTCCTTATCATGTCAAAA+AGG | - | chr3.1:6750882-6750901 | MS.gene56349:intron | 35.0% | |
| AGTTTGGCACTTTAAACAAG+TGG | - | chr3.1:6749508-6749527 | MS.gene56349:CDS | 35.0% | |
| ATCACATACATACTCAGCTT+TGG | + | chr3.1:6751340-6751359 | None:intergenic | 35.0% | |
| ATCTAACTCTTCTGTTTACC+AGG | - | chr3.1:6752453-6752472 | MS.gene56349:intron | 35.0% | |
| ATGGTTAACAAACTCACAAG+TGG | + | chr3.1:6751417-6751436 | None:intergenic | 35.0% | |
| CAAATAACCTAAGTGCAGAA+CGG | + | chr3.1:6748940-6748959 | None:intergenic | 35.0% | |
| CAATCTTCTTATAGCACCAA+TGG | + | chr3.1:6751717-6751736 | None:intergenic | 35.0% | |
| CATAAGAGTTTAACAGCATG+TGG | - | chr3.1:6749457-6749476 | MS.gene56349:CDS | 35.0% | |
| CATAAGTATACACACAGTGA+AGG | + | chr3.1:6750478-6750497 | None:intergenic | 35.0% | |
| CATATAGTGGTTTCTATGTC+AGG | + | chr3.1:6752079-6752098 | None:intergenic | 35.0% | |
| CTAGTCCGTTATATGTTTCT+AGG | + | chr3.1:6751385-6751404 | None:intergenic | 35.0% | |
| CTTCCATTCTGATAATCATG+AGG | - | chr3.1:6752393-6752412 | MS.gene56349:intron | 35.0% | |
| CTTCTTTGTAGAGTTTCTTC+TGG | + | chr3.1:6749183-6749202 | None:intergenic | 35.0% | |
| GATCTCTATTCAATGAACCA+AGG | + | chr3.1:6753320-6753339 | None:intergenic | 35.0% | |
| GGACATAAAGCATGTTTATC+TGG | + | chr3.1:6752124-6752143 | None:intergenic | 35.0% | |
| GGATGAACTTTCGAAATTCT+TGG | + | chr3.1:6753225-6753244 | None:intergenic | 35.0% | |
| GTATGGGATGTATAATTGGT+TGG | - | chr3.1:6750240-6750259 | MS.gene56349:CDS | 35.0% | |
| GTCAATATGCTAGTGTGTAT+CGG | - | chr3.1:6749372-6749391 | MS.gene56349:CDS | 35.0% | |
| GTCTTTACTATGAATGGTGT+TGG | - | chr3.1:6750450-6750469 | MS.gene56349:CDS | 35.0% | |
| TAACAACAGACAGACAATCA+AGG | + | chr3.1:6750556-6750575 | None:intergenic | 35.0% | |
| TAACGTACACTTACACTAGT+CGG | + | chr3.1:6749326-6749345 | None:intergenic | 35.0% | |
| TAGCATAATCTTCACTGATG+AGG | - | chr3.1:6752285-6752304 | MS.gene56349:intron | 35.0% | |
| TAGCCTCATGATTATCAGAA+TGG | + | chr3.1:6752399-6752418 | None:intergenic | 35.0% | |
| TATGCCTCAACAGAAAAAGA+AGG | - | chr3.1:6752095-6752114 | MS.gene56349:intron | 35.0% | |
| TCAATATGCTAGTGTGTATC+GGG | - | chr3.1:6749373-6749392 | MS.gene56349:CDS | 35.0% | |
| TCACATACATACTCAGCTTT+GGG | + | chr3.1:6751339-6751358 | None:intergenic | 35.0% | |
| TCAGCAGGAAAAAGAAGAAT+AGG | - | chr3.1:6749767-6749786 | MS.gene56349:CDS | 35.0% | |
| TCGAAAAGGTGACATAGTTT+GGG | - | chr3.1:6748709-6748728 | MS.gene56349:CDS | 35.0% | |
| TCTGGTATGGGATGTATAAT+TGG | - | chr3.1:6750236-6750255 | MS.gene56349:CDS | 35.0% | |
| TGTGTATCGGGGTAATTATT+GGG | - | chr3.1:6749385-6749404 | MS.gene56349:CDS | 35.0% | |
| TTAAAAGTTGGAGAGCAATC+AGG | - | chr3.1:6752622-6752641 | MS.gene56349:intron | 35.0% | |
| TTAGATTCTTTCCCCAAATG+TGG | + | chr3.1:6751871-6751890 | None:intergenic | 35.0% | |
| TTCGAAAAGGTGACATAGTT+TGG | - | chr3.1:6748708-6748727 | MS.gene56349:CDS | 35.0% | |
| TTGAAACTCAAACACAAGCA+TGG | + | chr3.1:6753246-6753265 | None:intergenic | 35.0% | |
| ! | ACAAGTGTCTTTTGTTACAC+TGG | - | chr3.1:6752766-6752785 | MS.gene56349:intron | 35.0% |
| ! | ACCAAACCATACCTTTCTTT+TGG | + | chr3.1:6752848-6752867 | None:intergenic | 35.0% |
| ! | AGTGCCTTTTTGACATGATA+AGG | + | chr3.1:6750889-6750908 | None:intergenic | 35.0% |
| ! | ATGACCTGATGTTTTTCCTT+GGG | + | chr3.1:6751668-6751687 | None:intergenic | 35.0% |
| ! | CTTTCTGTTTTCCTGTTTCA+AGG | + | chr3.1:6753001-6753020 | None:intergenic | 35.0% |
| ! | GGGGTAATTATTGGGAATTT+TGG | - | chr3.1:6749393-6749412 | MS.gene56349:CDS | 35.0% |
| ! | GTACTACTAAACGGATTCAA+CGG | - | chr3.1:6749637-6749656 | MS.gene56349:CDS | 35.0% |
| ! | GTGAAGATTATGCTAGTTTC+AGG | + | chr3.1:6752280-6752299 | None:intergenic | 35.0% |
| ! | GTTTTCCTGTTTCAAGGAAT+TGG | + | chr3.1:6752995-6753014 | None:intergenic | 35.0% |
| ! | TAGAGATAGATTTTGCGTTG+GGG | - | chr3.1:6750212-6750231 | MS.gene56349:CDS | 35.0% |
| ! | TATGACCTGATGTTTTTCCT+TGG | + | chr3.1:6751669-6751688 | None:intergenic | 35.0% |
| ! | TCTTTTGCTCCTGTGTAAAA+GGG | - | chr3.1:6749742-6749761 | MS.gene56349:CDS | 35.0% |
| ! | TTAACTGTTCCTTTGATGGT+AGG | + | chr3.1:6752705-6752724 | None:intergenic | 35.0% |
| ! | TTATCATGTCAAAAAGGCAC+TGG | - | chr3.1:6750888-6750907 | MS.gene56349:intron | 35.0% |
| ! | TTCTTTTGCTCCTGTGTAAA+AGG | - | chr3.1:6749741-6749760 | MS.gene56349:CDS | 35.0% |
| ! | TTTAAAGTGCCAAACTCCTT+AGG | + | chr3.1:6749504-6749523 | None:intergenic | 35.0% |
| ! | TTTGTGCAATTTTTGCACTC+TGG | - | chr3.1:6749925-6749944 | MS.gene56349:CDS | 35.0% |
| ! | TTTTCTGTTGAGGCATATAG+TGG | + | chr3.1:6752092-6752111 | None:intergenic | 35.0% |
| !! | AAAGGTATCGTCATTTCGAA+AGG | + | chr3.1:6748903-6748922 | None:intergenic | 35.0% |
| !! | AAGACAGTTTTTGCTAGCTT+AGG | - | chr3.1:6749854-6749873 | MS.gene56349:CDS | 35.0% |
| !! | AAGGTATCGTCATTTCGAAA+GGG | + | chr3.1:6748902-6748921 | None:intergenic | 35.0% |
| !! | AGATTTTACTTTTGCTGCAC+CGG | + | chr3.1:6752425-6752444 | None:intergenic | 35.0% |
| !! | TAATTGGTTGGGACTTGTTT+TGG | - | chr3.1:6750252-6750271 | MS.gene56349:CDS | 35.0% |
| !! | TCAGAATTGTTTCGAGTTTG+CGG | - | chr3.1:6748963-6748982 | MS.gene56349:intron | 35.0% |
| !! | TCCGTTATATGTTTCTAGGT+AGG | + | chr3.1:6751381-6751400 | None:intergenic | 35.0% |
| !!! | ATCAGAAGTTTTAGCTACAG+TGG | - | chr3.1:6750705-6750724 | MS.gene56349:intron | 35.0% |
| !!! | TGAAATACCCTTTTTGGAAC+GGG | + | chr3.1:6749681-6749700 | None:intergenic | 35.0% |
| AAAGAGGAGACAATGTACCA+AGG | - | chr3.1:6752038-6752057 | MS.gene56349:intron | 40.0% | |
| AAAGAGTTCAGCTTTACCAC+TGG | + | chr3.1:6751822-6751841 | None:intergenic | 40.0% | |
| AACAAGAACATGTCACCGTA+TGG | + | chr3.1:6751210-6751229 | None:intergenic | 40.0% | |
| ACAATACTGTCTTCACGAGT+AGG | - | chr3.1:6751118-6751137 | MS.gene56349:intron | 40.0% | |
| ACAATGCAGCTTATGAACCT+TGG | - | chr3.1:6753300-6753319 | MS.gene56349:CDS | 40.0% | |
| AGAACCCAAGGAAAAACATC+AGG | - | chr3.1:6751661-6751680 | MS.gene56349:intron | 40.0% | |
| AGAGAATGTCCTTCCAAATC+AGG | + | chr3.1:6751752-6751771 | None:intergenic | 40.0% | |
| ATCATCACCCGTTCCAAAAA+GGG | - | chr3.1:6749671-6749690 | MS.gene56349:CDS | 40.0% | |
| CAAAACCCAAAACTCCAATC+GGG | + | chr3.1:6749054-6749073 | None:intergenic | 40.0% | |
| CAAAAGGATCTAGCCAAAAC+CGG | + | chr3.1:6752882-6752901 | None:intergenic | 40.0% | |
| CAAAGTTACCAAACAAACCG+TGG | - | chr3.1:6753181-6753200 | MS.gene56349:CDS | 40.0% | |
| CAATATGCTAGTGTGTATCG+GGG | - | chr3.1:6749374-6749393 | MS.gene56349:CDS | 40.0% | |
| CGAAAGGGTAATTCATCGAA+GGG | + | chr3.1:6748887-6748906 | None:intergenic | 40.0% | |
| CGTTCTGCACTTAGGTTATT+TGG | - | chr3.1:6748938-6748957 | MS.gene56349:intron | 40.0% | |
| CTCAGTTACTCGAGAATCTA+TGG | - | chr3.1:6751634-6751653 | MS.gene56349:intron | 40.0% | |
| CTTAAGCCCATTCCACATTT+GGG | - | chr3.1:6751856-6751875 | MS.gene56349:intron | 40.0% | |
| GACCAAATGAGTCTTGAAGT+CGG | + | chr3.1:6752005-6752024 | None:intergenic | 40.0% | |
| GATAATCATGAGGCTAATGC+CGG | - | chr3.1:6752403-6752422 | MS.gene56349:intron | 40.0% | |
| GCACTTTAAACAAGTGGTCA+TGG | - | chr3.1:6749514-6749533 | MS.gene56349:CDS | 40.0% | |
| GCTAACGGTACAAACACAAA+TGG | - | chr3.1:6749799-6749818 | MS.gene56349:CDS | 40.0% | |
| GTAGAGTTTCTTCTGGTGAA+TGG | + | chr3.1:6749176-6749195 | None:intergenic | 40.0% | |
| GTCGATTATATCGGTGAAAG+AGG | - | chr3.1:6752022-6752041 | MS.gene56349:intron | 40.0% | |
| GTGTGTATCGGGGTAATTAT+TGG | - | chr3.1:6749384-6749403 | MS.gene56349:CDS | 40.0% | |
| TATCATCACCCGTTCCAAAA+AGG | - | chr3.1:6749670-6749689 | MS.gene56349:CDS | 40.0% | |
| TATGTATTGAGGTCTGCTGT+GGG | - | chr3.1:6750494-6750513 | MS.gene56349:CDS | 40.0% | |
| TCGAAAGGGTAATTCATCGA+AGG | + | chr3.1:6748888-6748907 | None:intergenic | 40.0% | |
| TCGAACTCGTTCTTAAAAGG+AGG | - | chr3.1:6749825-6749844 | MS.gene56349:CDS | 40.0% | |
| TCTCTTGTGTAGTAATGCAG+AGG | - | chr3.1:6751001-6751020 | MS.gene56349:intron | 40.0% | |
| TCTTTCCCCAAATGTGGAAT+GGG | + | chr3.1:6751865-6751884 | None:intergenic | 40.0% | |
| TGAGGTCCATAAAGTGGATA+TGG | - | chr3.1:6752303-6752322 | MS.gene56349:intron | 40.0% | |
| TGATAAGAGCCTAAGGAGTT+TGG | - | chr3.1:6749492-6749511 | MS.gene56349:CDS | 40.0% | |
| TTAAGCCCATTCCACATTTG+GGG | - | chr3.1:6751857-6751876 | MS.gene56349:intron | 40.0% | |
| TTAATTCTGTGACCTGCCAA+GGG | - | chr3.1:6750663-6750682 | MS.gene56349:intron | 40.0% | |
| TTATGTATTGAGGTCTGCTG+TGG | - | chr3.1:6750493-6750512 | MS.gene56349:CDS | 40.0% | |
| TTCATCGAAGGGAATAACCT+CGG | + | chr3.1:6748876-6748895 | None:intergenic | 40.0% | |
| TTCCGACTTCAAGACTCATT+TGG | - | chr3.1:6752000-6752019 | MS.gene56349:intron | 40.0% | |
| TTCTTTCCCCAAATGTGGAA+TGG | + | chr3.1:6751866-6751885 | None:intergenic | 40.0% | |
| TTTGCACTCTGGCTGTATAA+GGG | - | chr3.1:6749936-6749955 | MS.gene56349:CDS | 40.0% | |
| TTTGCGGTGTCTTTGCATAA+CGG | - | chr3.1:6748979-6748998 | MS.gene56349:intron | 40.0% | |
| ! | AAGACAAGTATTGCCACAAC+AGG | + | chr3.1:6749898-6749917 | None:intergenic | 40.0% |
| ! | AATGCAGAGGTATGTTCATG+TGG | - | chr3.1:6751014-6751033 | MS.gene56349:intron | 40.0% |
| ! | ACTTTTTGCACAGTCTACTC+GGG | + | chr3.1:6750427-6750446 | None:intergenic | 40.0% |
| ! | AGTTTCAGGAAAGTGTATGC+AGG | + | chr3.1:6752266-6752285 | None:intergenic | 40.0% |
| ! | ATGTACCAAGGCTTTTCTCT+AGG | - | chr3.1:6752050-6752069 | MS.gene56349:intron | 40.0% |
| ! | CACTAGTCGGTTAAAAGCAT+CGG | + | chr3.1:6749313-6749332 | None:intergenic | 40.0% |
| ! | GACTTTTTGCACAGTCTACT+CGG | + | chr3.1:6750428-6750447 | None:intergenic | 40.0% |
| ! | GCCAAAAGAAAGGTATGGTT+TGG | - | chr3.1:6752844-6752863 | MS.gene56349:intron | 40.0% |
| ! | GTCTGTAGTGGTTTGTGTTT+AGG | - | chr3.1:6750606-6750625 | MS.gene56349:intron | 40.0% |
| ! | TTTGACCCGATTGGAGTTTT+GGG | - | chr3.1:6749046-6749065 | MS.gene56349:intron | 40.0% |
| ! | TTTTGCACTCTGGCTGTATA+AGG | - | chr3.1:6749935-6749954 | MS.gene56349:CDS | 40.0% |
| !! | TACTCAGCTTTGGGAAAACT+CGG | + | chr3.1:6751330-6751349 | None:intergenic | 40.0% |
| !! | TTTTGATAGTTGGCCTGTTG+TGG | - | chr3.1:6749882-6749901 | MS.gene56349:CDS | 40.0% |
| !!! | GATCCTGTTAGTTTTGCTGA+GGG | + | chr3.1:6752946-6752965 | None:intergenic | 40.0% |
| !!! | TGATCCTGTTAGTTTTGCTG+AGG | + | chr3.1:6752947-6752966 | None:intergenic | 40.0% |
| AACACAAACCACTACAGACC+TGG | + | chr3.1:6750605-6750624 | None:intergenic | 45.0% | |
| AACAGCTGCCCCTTACAAAA+AGG | + | chr3.1:6750645-6750664 | None:intergenic | 45.0% | |
| AACCTCGGATTCGACGAAAA+AGG | + | chr3.1:6748861-6748880 | None:intergenic | 45.0% | |
| ACAGGGATGCAGAAGAAAGA+TGG | - | chr3.1:6750930-6750949 | MS.gene56349:intron | 45.0% | |
| ACGGAACGCTTCACATTGAA+AGG | + | chr3.1:6748921-6748940 | None:intergenic | 45.0% | |
| ACTCTTCTGTTTACCAGGAG+AGG | - | chr3.1:6752458-6752477 | MS.gene56349:intron | 45.0% | |
| ACTGTCTTCACGAGTAGGAT+GGG | - | chr3.1:6751123-6751142 | MS.gene56349:intron | 45.0% | |
| AGGCTGCAACTAAGTTGTGA+TGG | - | chr3.1:6752478-6752497 | MS.gene56349:intron | 45.0% | |
| ATCAGGTCATATCTGACCGA+GGG | - | chr3.1:6751678-6751697 | MS.gene56349:intron | 45.0% | |
| ATCCTGAAGGACTATGGCAA+AGG | + | chr3.1:6750581-6750600 | None:intergenic | 45.0% | |
| ATCTATGGCGATAGAACCCA+AGG | - | chr3.1:6751649-6751668 | MS.gene56349:intron | 45.0% | |
| ATGAGTCTTGAAGTCGGAAG+CGG | + | chr3.1:6751999-6752018 | None:intergenic | 45.0% | |
| ATGGAGGGAGATTATTCGAC+AGG | - | chr3.1:6750949-6750968 | MS.gene56349:intron | 45.0% | |
| ATGGATGATCGTCACAAGCA+TGG | + | chr3.1:6751436-6751455 | None:intergenic | 45.0% | |
| ATGTATTGAGGTCTGCTGTG+GGG | - | chr3.1:6750495-6750514 | MS.gene56349:CDS | 45.0% | |
| CACTGATGAGGTCCATAAAG+TGG | - | chr3.1:6752297-6752316 | MS.gene56349:intron | 45.0% | |
| CATCCCTCAGCAAAACTAAC+AGG | - | chr3.1:6752940-6752959 | MS.gene56349:CDS | 45.0% | |
| CCTTAAGCCCATTCCACATT+TGG | - | chr3.1:6751855-6751874 | MS.gene56349:intron | 45.0% | |
| CCTTCCAAATCAGGAACTGT+TGG | + | chr3.1:6751743-6751762 | None:intergenic | 45.0% | |
| CTCTAATGTGAACTGCTGTG+CGG | - | chr3.1:6750358-6750377 | MS.gene56349:CDS | 45.0% | |
| CTGTGTAAAAGGGTTTCAGC+AGG | - | chr3.1:6749752-6749771 | MS.gene56349:CDS | 45.0% | |
| GAAGCCAACAGTTCCTGATT+TGG | - | chr3.1:6751736-6751755 | MS.gene56349:intron | 45.0% | |
| GAGTAGCATCTGACTCAAAG+AGG | + | chr3.1:6751615-6751634 | None:intergenic | 45.0% | |
| GAGTTTCTTCTGGTGAATGG+TGG | + | chr3.1:6749173-6749192 | None:intergenic | 45.0% | |
| GCAGTGTATCATGAGTGAAC+AGG | - | chr3.1:6751041-6751060 | MS.gene56349:intron | 45.0% | |
| GGATGCAGAAGAAAGATGGA+GGG | - | chr3.1:6750934-6750953 | MS.gene56349:intron | 45.0% | |
| GGGCAGAAAAACATGACCAT+TGG | - | chr3.1:6751698-6751717 | MS.gene56349:intron | 45.0% | |
| GGTTATCAGTTTGACCCGAT+TGG | - | chr3.1:6749037-6749056 | MS.gene56349:intron | 45.0% | |
| GTTAATTCTGTGACCTGCCA+AGG | - | chr3.1:6750662-6750681 | MS.gene56349:intron | 45.0% | |
| TAATTCTGTGACCTGCCAAG+GGG | - | chr3.1:6750664-6750683 | MS.gene56349:intron | 45.0% | |
| TACTGTCTTCACGAGTAGGA+TGG | - | chr3.1:6751122-6751141 | MS.gene56349:intron | 45.0% | |
| TAGGATGGGAATGATGGCAA+GGG | - | chr3.1:6751137-6751156 | MS.gene56349:intron | 45.0% | |
| TCAGCTTTACCACTGGTAGT+TGG | + | chr3.1:6751815-6751834 | None:intergenic | 45.0% | |
| TCATCTCCTAGTTTAGCGTC+TGG | - | chr3.1:6752370-6752389 | MS.gene56349:intron | 45.0% | |
| TCCTGAAGGACTATGGCAAA+GGG | + | chr3.1:6750580-6750599 | None:intergenic | 45.0% | |
| TCTTGAGCTCTGCAAAGTTG+AGG | + | chr3.1:6752145-6752164 | None:intergenic | 45.0% | |
| TGGAGGGAGATTATTCGACA+GGG | - | chr3.1:6750950-6750969 | MS.gene56349:intron | 45.0% | |
| TTGCGGTGTCTTTGCATAAC+GGG | - | chr3.1:6748980-6748999 | MS.gene56349:intron | 45.0% | |
| ! | AACGGATTCAACGGATTCAG+AGG | - | chr3.1:6749646-6749665 | MS.gene56349:CDS | 45.0% |
| ! | ACGGATTCAACGGATTCAGA+GGG | - | chr3.1:6749647-6749666 | MS.gene56349:CDS | 45.0% |
| ! | CCAAATGTGGAATGGGCTTA+AGG | + | chr3.1:6751858-6751877 | None:intergenic | 45.0% |
| ! | CTGCTGAAACCCTTTTACAC+AGG | + | chr3.1:6749754-6749773 | None:intergenic | 45.0% |
| ! | GAAGAGGAGAGGGTTTTACA+CGG | - | chr3.1:6749010-6749029 | MS.gene56349:intron | 45.0% |
| ! | GTACTGATGTGTGAGATCCT+AGG | + | chr3.1:6752205-6752224 | None:intergenic | 45.0% |
| ! | GTCGCCTTCTTTTTCTGTTG+AGG | + | chr3.1:6752102-6752121 | None:intergenic | 45.0% |
| ! | GTTTGACCCGATTGGAGTTT+TGG | - | chr3.1:6749045-6749064 | MS.gene56349:intron | 45.0% |
| ! | TAGATTTTGCGTTGGGGATC+TGG | - | chr3.1:6750218-6750237 | MS.gene56349:CDS | 45.0% |
| ! | TCTGCGGATCGTTTGTTAGA+GGG | - | chr3.1:6752556-6752575 | MS.gene56349:intron | 45.0% |
| ! | TGGTCATGTTTTTCTGCCCT+CGG | + | chr3.1:6751697-6751716 | None:intergenic | 45.0% |
| ! | TTCTGCGGATCGTTTGTTAG+AGG | - | chr3.1:6752555-6752574 | MS.gene56349:intron | 45.0% |
| !! | AAGGTATGGTTTGGTGATGC+TGG | - | chr3.1:6752853-6752872 | MS.gene56349:intron | 45.0% |
| !! | CAACAACAACGATTGGTCTC+CGG | - | chr3.1:6748763-6748782 | MS.gene56349:CDS | 45.0% |
| !! | CATAACGGGTCATAACGAAG+AGG | - | chr3.1:6748994-6749013 | MS.gene56349:intron | 45.0% |
| !! | CCAACAGTTCCTGATTTGGA+AGG | - | chr3.1:6751740-6751759 | MS.gene56349:intron | 45.0% |
| !! | GTGCTGACTGCACTGATTAT+AGG | - | chr3.1:6753364-6753383 | MS.gene56349:CDS | 45.0% |
| !! | TTGGCAGGGAAGTATTGAGA+TGG | - | chr3.1:6751169-6751188 | MS.gene56349:intron | 45.0% |
| !!! | GCTGACTCTTTTGGCTTAAG+AGG | + | chr3.1:6752520-6752539 | None:intergenic | 45.0% |
| AACTTAGTTGCAGCCTCTCC+TGG | + | chr3.1:6752474-6752493 | None:intergenic | 50.0% | |
| AAGCGTTCCGTTCTGCACTT+AGG | - | chr3.1:6748930-6748949 | MS.gene56349:intron | 50.0% | |
| AATTCTGTGACCTGCCAAGG+GGG | - | chr3.1:6750665-6750684 | MS.gene56349:intron | 50.0% | |
| ACTACTCCAAAACACCCCCT+TGG | + | chr3.1:6750682-6750701 | None:intergenic | 50.0% | |
| AGAATGAGAGTGAGATGCCG+AGG | + | chr3.1:6748811-6748830 | None:intergenic | 50.0% | |
| ATGGGAATGATGGCAAGGGT+GGG | - | chr3.1:6751141-6751160 | MS.gene56349:intron | 50.0% | |
| CACGAGTAGGATGGGAATGA+TGG | - | chr3.1:6751131-6751150 | MS.gene56349:intron | 50.0% | |
| CATCAGGTCATATCTGACCG+AGG | - | chr3.1:6751677-6751696 | MS.gene56349:intron | 50.0% | |
| CCTGAAGGACTATGGCAAAG+GGG | + | chr3.1:6750579-6750598 | None:intergenic | 50.0% | |
| CTGGAAGATGTGACCAAAGC+CGG | + | chr3.1:6748785-6748804 | None:intergenic | 50.0% | |
| GGCAACCTAGAGAAAAGCCT+TGG | + | chr3.1:6752058-6752077 | None:intergenic | 50.0% | |
| GGGATGCAGAAGAAAGATGG+AGG | - | chr3.1:6750933-6750952 | MS.gene56349:intron | 50.0% | |
| GGGTCATAACGAAGAGGAGA+GGG | - | chr3.1:6749000-6749019 | MS.gene56349:intron | 50.0% | |
| GTAGGATGGGAATGATGGCA+AGG | - | chr3.1:6751136-6751155 | MS.gene56349:intron | 50.0% | |
| TCACTCTTTCAGCGATGACC+CGG | + | chr3.1:6751098-6751117 | None:intergenic | 50.0% | |
| TCGACAGTGTCTGTTCACTG+AGG | - | chr3.1:6751069-6751088 | MS.gene56349:intron | 50.0% | |
| TGGAAGCCAGACGCTAAACT+AGG | + | chr3.1:6752379-6752398 | None:intergenic | 50.0% | |
| TTGCGTTGGGGATCTGGTAT+GGG | - | chr3.1:6750224-6750243 | MS.gene56349:CDS | 50.0% | |
| TTTGCGTTGGGGATCTGGTA+TGG | - | chr3.1:6750223-6750242 | MS.gene56349:CDS | 50.0% | |
| ! | AATGATGGCAAGGGTGGGTT+TGG | - | chr3.1:6751146-6751165 | MS.gene56349:intron | 50.0% |
| ! | ATGTGGAATGGGCTTAAGGC+AGG | + | chr3.1:6751854-6751873 | None:intergenic | 50.0% |
| ! | CGACGAAAAAGGTGCGTTGT+GGG | + | chr3.1:6748850-6748869 | None:intergenic | 50.0% |
| ! | GACGAAAAAGGTGCGTTGTG+GGG | + | chr3.1:6748849-6748868 | None:intergenic | 50.0% |
| ! | GAGAGGGTTTTACACGGATC+GGG | - | chr3.1:6749016-6749035 | MS.gene56349:intron | 50.0% |
| ! | GGAGAGGGTTTTACACGGAT+CGG | - | chr3.1:6749015-6749034 | MS.gene56349:intron | 50.0% |
| ! | GTGATGCTGGTATCCGGTTT+TGG | - | chr3.1:6752866-6752885 | MS.gene56349:intron | 50.0% |
| ! | TCGACGAAAAAGGTGCGTTG+TGG | + | chr3.1:6748851-6748870 | None:intergenic | 50.0% |
| !! | AAAGCACTGAGTCGTAGGAC+AGG | - | chr3.1:6750912-6750931 | MS.gene56349:intron | 50.0% |
| !! | AAGCACTGAGTCGTAGGACA+GGG | - | chr3.1:6750913-6750932 | MS.gene56349:intron | 50.0% |
| !! | CACCTTTTTCGTCGAATCCG+AGG | - | chr3.1:6748856-6748875 | MS.gene56349:intron | 50.0% |
| !! | CTGGTAAAGCACTGAGTCGT+AGG | - | chr3.1:6750907-6750926 | MS.gene56349:intron | 50.0% |
| !! | GCTGATTGGTGGCTGTGTTT+TGG | - | chr3.1:6750524-6750543 | MS.gene56349:intron | 50.0% |
| !! | GGTTTGGTGATGCTGGTATC+CGG | - | chr3.1:6752860-6752879 | MS.gene56349:intron | 50.0% |
| !! | TTGTTACACTGGCTCAGCTC+AGG | - | chr3.1:6752777-6752796 | MS.gene56349:intron | 50.0% |
| !!! | ATGCTGCTGCTGTTTTGCCT+TGG | - | chr3.1:6749080-6749099 | MS.gene56349:intron | 50.0% |
| !!! | TGCTGCTGCTGTTTTGCCTT+GGG | - | chr3.1:6749081-6749100 | MS.gene56349:intron | 50.0% |
| !!! | TGCTGTTTTGCCTTGGGTTG+AGG | - | chr3.1:6749087-6749106 | MS.gene56349:intron | 50.0% |
| ATGAGAGTGAGATGCCGAGG+TGG | + | chr3.1:6748808-6748827 | None:intergenic | 55.0% | |
| ATTGAGGTCTGCTGTGGGGT+CGG | - | chr3.1:6750499-6750518 | MS.gene56349:CDS | 55.0% | |
| CCACTGGTAGTTGGAACCTC+TGG | + | chr3.1:6751806-6751825 | None:intergenic | 55.0% | |
| CCAGAGGTTCCAACTACCAG+TGG | - | chr3.1:6751803-6751822 | MS.gene56349:intron | 55.0% | |
| CCATAGTCCTTCAGGATGCC+AGG | - | chr3.1:6750584-6750603 | MS.gene56349:intron | 55.0% | |
| CCCCTTTGCCATAGTCCTTC+AGG | - | chr3.1:6750576-6750595 | MS.gene56349:intron | 55.0% | |
| CCTGGCATCCTGAAGGACTA+TGG | + | chr3.1:6750587-6750606 | None:intergenic | 55.0% | |
| CGGGTCATAACGAAGAGGAG+AGG | - | chr3.1:6748999-6749018 | MS.gene56349:intron | 55.0% | |
| CTACAGACCTGGCATCCTGA+AGG | + | chr3.1:6750594-6750613 | None:intergenic | 55.0% | |
| GATGGGAATGATGGCAAGGG+TGG | - | chr3.1:6751140-6751159 | MS.gene56349:intron | 55.0% | |
| GTCACATCTTCCAGCCACCT+CGG | - | chr3.1:6748791-6748810 | MS.gene56349:intron | 55.0% | |
| TCAGGATGCCAGGTCTGTAG+TGG | - | chr3.1:6750594-6750613 | MS.gene56349:intron | 55.0% | |
| TGTCTGTTCACTGAGGCCAC+CGG | - | chr3.1:6751076-6751095 | MS.gene56349:intron | 55.0% | |
| ! | AAGGGTGGGTTTGGTTGGCA+GGG | - | chr3.1:6751155-6751174 | MS.gene56349:intron | 55.0% |
| ! | AAGGTGCGTTGTGGGGTGTT+AGG | + | chr3.1:6748842-6748861 | None:intergenic | 55.0% |
| ! | AGGTGCGTTGTGGGGTGTTA+GGG | + | chr3.1:6748841-6748860 | None:intergenic | 55.0% |
| ! | ATGGCAAGGGTGGGTTTGGT+TGG | - | chr3.1:6751150-6751169 | MS.gene56349:intron | 55.0% |
| !! | CAACGATTGGTCTCCGGCTT+TGG | - | chr3.1:6748769-6748788 | MS.gene56349:CDS | 55.0% |
| !! | TTACACTGGCTCAGCTCAGG+TGG | - | chr3.1:6752780-6752799 | MS.gene56349:intron | 55.0% |
| CTCCAAAACACCCCCTTGGC+AGG | + | chr3.1:6750678-6750697 | None:intergenic | 60.0% | |
| CTCTTTCAGCGATGACCCGG+TGG | + | chr3.1:6751095-6751114 | None:intergenic | 60.0% | |
| GCACACGAAGCCTCAACCCA+AGG | + | chr3.1:6749100-6749119 | None:intergenic | 60.0% | |
| GTCTGTTCACTGAGGCCACC+GGG | - | chr3.1:6751077-6751096 | MS.gene56349:intron | 60.0% | |
| ! | CAAGGGTGGGTTTGGTTGGC+AGG | - | chr3.1:6751154-6751173 | MS.gene56349:intron | 60.0% |
| !!! | GACCTGCCAAGGGGGTGTTT+TGG | - | chr3.1:6750673-6750692 | MS.gene56349:intron | 60.0% |
| CTGTGGGGTCGGCAGCTGAT+TGG | - | chr3.1:6750510-6750529 | MS.gene56349:intron | 65.0% | |
| GAGTGAGATGCCGAGGTGGC+TGG | + | chr3.1:6748804-6748823 | None:intergenic | 65.0% | |
| TGGGGTCGGCAGCTGATTGG+TGG | - | chr3.1:6750513-6750532 | MS.gene56349:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 6748698 | 6753413 | 6748698 | ID=MS.gene56349 |
| chr3.1 | mRNA | 6748698 | 6753413 | 6748698 | ID=MS.gene56349.t1;Parent=MS.gene56349 |
| chr3.1 | exon | 6752897 | 6753413 | 6752897 | ID=MS.gene56349.t1.exon1;Parent=MS.gene56349.t1 |
| chr3.1 | CDS | 6752897 | 6753413 | 6752897 | ID=cds.MS.gene56349.t1;Parent=MS.gene56349.t1 |
| chr3.1 | exon | 6749256 | 6750526 | 6749256 | ID=MS.gene56349.t1.exon2;Parent=MS.gene56349.t1 |
| chr3.1 | CDS | 6749256 | 6750526 | 6749256 | ID=cds.MS.gene56349.t1;Parent=MS.gene56349.t1 |
| chr3.1 | exon | 6748698 | 6748802 | 6748698 | ID=MS.gene56349.t1.exon3;Parent=MS.gene56349.t1 |
| chr3.1 | CDS | 6748698 | 6748802 | 6748698 | ID=cds.MS.gene56349.t1;Parent=MS.gene56349.t1 |
| Gene Sequence |
| Protein sequence |
