AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56647

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56647.t1 MTR_8g017540 65.060 83 25 2 48 128 39 119 4.04e-30 111
MS.gene56647.t1 MTR_1g112760 78.571 70 11 2 55 122 1 68 4.38e-30 108
MS.gene56647.t1 MTR_3g077110 91.379 58 3 1 67 122 10 67 1.24e-29 109
MS.gene56647.t1 MTR_4g105130 75.714 70 12 2 55 122 1 67 1.85e-28 106
MS.gene56647.t1 MTR_2g099740 73.134 67 14 2 58 122 3 67 3.44e-27 103
MS.gene56647.t1 MTR_7g111290 75.714 70 12 2 55 122 1 67 4.44e-27 103
MS.gene56647.t1 MTR_1g085040 75.714 70 12 2 55 122 1 67 5.47e-27 103
MS.gene56647.t1 MTR_8g017440 68.000 75 20 2 58 130 3 75 7.75e-27 102
MS.gene56647.t1 MTR_8g017500 72.059 68 15 2 57 122 2 67 1.38e-26 101
MS.gene56647.t1 MTR_1g085640 72.857 70 14 2 55 122 1 67 4.66e-26 100
MS.gene56647.t1 MTR_7g110830 72.857 70 14 2 55 122 1 67 6.51e-26 100
MS.gene56647.t1 MTR_8g017390 66.216 74 20 3 58 128 3 74 4.52e-24 95.9
MS.gene56647.t1 MTR_8g017350 67.606 71 17 3 55 122 1 68 6.12e-24 95.9
MS.gene56647.t1 MTR_8g017340 67.606 71 17 3 55 122 1 68 7.61e-24 95.5
MS.gene56647.t1 MTR_8g098860 62.500 72 22 2 55 124 1 69 4.73e-23 91.7
MS.gene56647.t1 MTR_5g010020 65.217 69 20 2 58 124 3 69 4.89e-23 92.0
MS.gene56647.t1 MTR_2g064160 73.333 60 14 1 65 122 7 66 5.48e-23 91.7
MS.gene56647.t1 MTR_4g065017 66.667 66 20 1 59 122 7 72 1.30e-21 88.2
MS.gene56647.t1 MTR_1g100667 65.672 67 21 1 60 124 4 70 1.46e-21 87.0
MS.gene56647.t1 MTR_3g028740 58.442 77 28 2 50 122 1 77 1.07e-20 85.9
MS.gene56647.t1 MTR_6g055910 68.182 66 17 2 59 122 6 69 3.51e-20 83.6
MS.gene56647.t1 MTR_2g097910 73.214 56 13 1 69 122 20 75 6.43e-20 83.6
MS.gene56647.t1 MTR_2g089450 59.677 62 23 1 69 128 12 73 2.43e-19 80.9
MS.gene56647.t1 MTR_3g074520 55.882 68 26 2 59 124 4 69 1.86e-18 79.7
MS.gene56647.t1 MTR_8g095390 58.333 72 26 2 59 128 4 73 2.46e-18 79.0
MS.gene56647.t1 MTR_2g011660 59.091 66 24 2 61 124 6 70 2.97e-18 79.0
MS.gene56647.t1 MTR_5g079670 60.345 58 21 1 67 122 9 66 4.96e-18 76.6
MS.gene56647.t1 MTR_6g009430 52.308 65 27 2 61 123 6 68 7.12e-18 78.2
MS.gene56647.t1 MTR_6g012690 62.069 58 20 1 69 124 12 69 7.35e-18 78.2
MS.gene56647.t1 MTR_4g091490 57.353 68 26 2 59 124 4 70 1.04e-17 77.8
MS.gene56647.t1 MTR_2g067420 57.576 66 24 2 59 122 6 69 1.05e-17 77.4
MS.gene56647.t1 MTR_3g097450 55.556 72 28 2 59 128 4 73 1.24e-17 77.0
MS.gene56647.t1 MTR_4g082230 57.812 64 23 2 61 122 6 67 1.48e-17 77.4
MS.gene56647.t1 MTR_1g100653 57.576 66 24 2 59 122 4 67 1.74e-17 76.6
MS.gene56647.t1 MTR_1g076150 60.606 66 22 2 59 122 4 67 1.79e-17 75.9
MS.gene56647.t1 MTR_2g089420 60.714 56 20 1 69 122 11 66 1.90e-17 77.4
MS.gene56647.t1 MTR_4g082290 59.375 64 22 2 61 122 6 67 2.04e-17 77.0
MS.gene56647.t1 MTR_0008s0390 51.429 70 30 2 55 122 1 68 2.32e-17 75.9
MS.gene56647.t1 MTR_0251s0050 51.429 70 30 2 55 122 1 68 2.32e-17 75.9
MS.gene56647.t1 MTR_7g115650 57.576 66 24 2 61 124 6 69 2.55e-17 74.7
MS.gene56647.t1 MTR_4g478180 57.576 66 24 2 59 122 5 68 4.59e-17 75.9
MS.gene56647.t1 MTR_2g089620 57.576 66 24 2 61 124 6 69 6.18e-17 75.5
MS.gene56647.t1 MTR_4g073420 57.576 66 24 2 59 122 4 67 1.51e-16 73.9
MS.gene56647.t1 MTR_5g007370 60.345 58 21 1 69 124 12 69 2.23e-16 73.6
MS.gene56647.t1 MTR_7g011170 57.812 64 23 2 61 122 6 67 2.40e-16 73.6
MS.gene56647.t1 MTR_1g073170 57.377 61 24 1 70 128 21 81 2.49e-16 72.8
MS.gene56647.t1 MTR_3g461490 57.143 63 23 2 61 121 6 66 2.50e-16 73.6
MS.gene56647.t1 MTR_0008s0470 50.000 70 31 2 55 122 1 68 2.90e-16 73.2
MS.gene56647.t1 MTR_1g017000 53.030 66 26 3 59 121 4 67 3.65e-16 72.4
MS.gene56647.t1 MTR_4g485530 61.111 54 19 1 71 122 14 67 6.56e-16 70.9
MS.gene56647.t1 MTR_1g045610 61.818 55 19 1 70 122 22 76 6.72e-16 71.6
MS.gene56647.t1 MTR_4g102380 62.500 56 19 1 69 122 12 67 8.80e-16 71.6
MS.gene56647.t1 MTR_7g109320 59.091 66 23 2 59 122 4 67 9.73e-16 72.4
MS.gene56647.t1 MTR_7g035075 53.846 65 28 1 60 122 5 69 1.24e-15 70.1
MS.gene56647.t1 MTR_3g065440 64.286 56 18 1 69 122 12 67 1.26e-15 71.6
MS.gene56647.t1 MTR_5g078140 64.286 56 18 1 69 122 12 67 1.31e-15 71.6
MS.gene56647.t1 MTR_1g043080 56.061 66 25 2 59 122 4 67 1.57e-15 70.9
MS.gene56647.t1 MTR_5g029840 58.621 58 22 1 69 124 12 69 1.97e-15 71.2
MS.gene56647.t1 MTR_1g086510 58.929 56 21 1 69 122 21 76 2.14e-15 70.5
MS.gene56647.t1 MTR_5g007300 58.929 56 21 1 69 122 64 119 3.81e-15 67.4
MS.gene56647.t1 MTR_2g095520 54.545 66 25 3 59 121 4 67 4.20e-15 70.1
MS.gene56647.t1 MTR_6g006030 53.125 64 28 1 61 122 6 69 4.97e-15 68.6
MS.gene56647.t1 MTR_1g110460 45.455 77 40 1 48 122 5 81 5.15e-15 70.1
MS.gene56647.t1 MTR_1g017140 53.030 66 26 3 59 121 4 67 6.61e-15 69.7
MS.gene56647.t1 MTR_4g125520 53.333 60 26 1 65 122 8 67 7.06e-15 69.7
MS.gene56647.t1 MTR_1g062940 58.929 56 21 1 68 121 5 60 9.50e-15 68.2
MS.gene56647.t1 MTR_8g031360 61.404 57 19 1 69 122 13 69 9.55e-15 68.9
MS.gene56647.t1 MTR_5g078930 55.385 65 26 2 61 123 2 65 1.10e-14 67.8
MS.gene56647.t1 MTR_4g057635 53.030 66 26 3 59 121 4 67 1.11e-14 68.9
MS.gene56647.t1 MTR_1g043050 56.061 66 25 2 59 122 4 67 1.12e-14 68.6
MS.gene56647.t1 MTR_4g097570 53.030 66 26 3 59 121 4 67 1.25e-14 68.6
MS.gene56647.t1 MTR_4g121460 57.576 66 24 2 59 122 4 67 1.29e-14 68.9
MS.gene56647.t1 MTR_7g096930 51.515 66 28 2 59 122 4 67 1.66e-14 68.2
MS.gene56647.t1 MTR_1g086530 51.786 56 25 1 69 122 33 88 2.12e-14 67.8
MS.gene56647.t1 MTR_3g103570 51.515 66 27 3 59 121 4 67 2.15e-14 68.6
MS.gene56647.t1 MTR_7g102110 51.515 66 27 3 59 121 4 67 2.30e-14 67.8
MS.gene56647.t1 MTR_8g027345 58.929 56 21 1 69 122 12 67 2.54e-14 67.8
MS.gene56647.t1 MTR_7g076740 61.404 57 19 2 69 122 12 68 2.80e-14 67.8
MS.gene56647.t1 MTR_5g042030 55.932 59 24 1 66 122 4 62 3.15e-14 67.8
MS.gene56647.t1 MTR_8g020490 50.794 63 29 1 62 122 1 63 3.34e-14 67.0
MS.gene56647.t1 MTR_5g014990 51.515 66 27 3 59 121 4 67 4.11e-14 67.4
MS.gene56647.t1 MTR_8g017480 63.462 52 15 2 58 107 3 52 6.57e-14 62.0
MS.gene56647.t1 MTR_7g117730 58.929 56 21 1 69 122 12 67 7.50e-14 66.2
MS.gene56647.t1 MTR_0008s0280 58.182 55 21 1 70 122 13 67 7.64e-14 65.9
MS.gene56647.t1 MTR_3g083540 58.929 56 21 1 69 122 41 96 7.69e-14 66.6
MS.gene56647.t1 MTR_4g097570 52.239 67 26 4 59 121 4 68 8.43e-14 66.6
MS.gene56647.t1 MTR_2g034790 56.061 66 25 2 59 122 4 67 8.76e-14 66.6
MS.gene56647.t1 MTR_0140s0030 57.143 56 22 1 69 122 13 68 1.07e-13 66.6
MS.gene56647.t1 MTR_0489s0020 57.143 56 22 1 69 122 13 68 1.07e-13 66.6
MS.gene56647.t1 MTR_3g039990 57.143 56 22 1 69 122 13 68 1.42e-13 65.9
MS.gene56647.t1 MTR_4g128670 50.000 66 28 3 59 121 4 67 1.43e-13 66.2
MS.gene56647.t1 MTR_4g063100 54.545 55 23 1 70 122 8 62 1.58e-13 65.5
MS.gene56647.t1 MTR_2g096380 50.000 58 27 1 67 122 4 61 2.57e-13 64.7
MS.gene56647.t1 MTR_5g079120 54.386 57 24 1 69 123 61 117 3.37e-13 64.7
MS.gene56647.t1 MTR_0063s0090 56.364 55 22 1 69 121 12 66 4.14e-13 63.9
MS.gene56647.t1 MTR_6g090405 53.030 66 26 3 59 121 4 67 4.35e-13 64.3
MS.gene56647.t1 MTR_7g087130 51.562 64 27 2 61 122 6 67 4.55e-13 64.7
MS.gene56647.t1 MTR_7g010210 50.000 64 30 1 67 128 10 73 5.38e-13 64.3
MS.gene56647.t1 MTR_2g033170 53.571 56 24 1 69 122 24 79 5.69e-13 64.3
MS.gene56647.t1 MTR_7g010210 50.000 64 30 1 67 128 10 73 6.43e-13 63.9
MS.gene56647.t1 MTR_6g012180 53.448 58 25 1 67 122 10 67 9.02e-13 63.9
MS.gene56647.t1 MTR_4g100720 46.667 60 30 1 65 122 9 68 9.09e-13 62.0
MS.gene56647.t1 MTR_0023s0210 50.000 58 27 1 69 124 7 64 1.17e-12 59.7
MS.gene56647.t1 MTR_5g078800 51.471 68 30 2 62 127 1 67 1.46e-12 62.8
MS.gene56647.t1 MTR_1g021230 53.571 56 24 1 69 122 57 112 1.69e-12 63.2
MS.gene56647.t1 MTR_0247s0040 49.180 61 29 1 65 123 3 63 2.08e-12 61.2
MS.gene56647.t1 MTR_3g052430 50.000 62 29 1 69 128 41 102 2.33e-12 62.8
MS.gene56647.t1 MTR_3g052450 50.000 62 29 1 69 128 40 101 2.87e-12 62.8
MS.gene56647.t1 MTR_8g091850 85.294 34 5 0 35 68 164 197 3.10e-12 62.0
MS.gene56647.t1 MTR_0197s0010 58.824 51 19 1 74 122 6 56 3.44e-12 61.2
MS.gene56647.t1 MTR_5g079290 54.386 57 24 1 69 123 17 73 3.50e-12 61.6
MS.gene56647.t1 MTR_0193s0090 52.632 57 25 1 69 123 7 63 4.00e-12 60.8
MS.gene56647.t1 MTR_5g062790 51.667 60 27 1 65 122 5 64 4.36e-12 61.6
MS.gene56647.t1 MTR_8g042410 39.785 93 44 3 34 122 8 92 6.64e-12 61.6
MS.gene56647.t1 MTR_5g078860 53.125 64 27 2 62 123 1 63 7.60e-12 61.2
MS.gene56647.t1 MTR_2g088170 51.786 56 25 1 69 122 29 84 9.04e-12 61.2
MS.gene56647.t1 MTR_4g123040 51.786 56 25 1 69 122 24 79 1.06e-11 60.8
MS.gene56647.t1 MTR_1g085880 49.180 61 28 2 65 122 7 67 1.06e-11 59.7
MS.gene56647.t1 MTR_5g088640 54.545 55 23 1 70 122 13 67 1.12e-11 60.5
MS.gene56647.t1 MTR_5g088080 54.545 55 23 1 70 122 13 67 1.18e-11 60.5
MS.gene56647.t1 MTR_5g088150 54.545 55 23 1 70 122 13 67 1.18e-11 60.5
MS.gene56647.t1 MTR_5g488210 54.545 55 23 1 70 122 13 67 1.18e-11 60.5
MS.gene56647.t1 MTR_3g011610 51.786 56 25 1 69 122 37 92 1.24e-11 60.8
MS.gene56647.t1 MTR_5g078910 51.562 64 28 2 62 123 1 63 1.24e-11 60.5
MS.gene56647.t1 MTR_5g078950 47.541 61 30 1 65 123 3 63 1.37e-11 60.1
MS.gene56647.t1 MTR_5g488170 54.545 55 23 1 70 122 13 67 1.55e-11 59.7
MS.gene56647.t1 MTR_5g079220 44.156 77 40 2 50 123 1 77 1.68e-11 60.1
MS.gene56647.t1 MTR_8g060940 47.692 65 31 2 62 124 1 64 1.97e-11 59.7
MS.gene56647.t1 MTR_1g085770 49.180 61 28 2 65 122 7 67 3.64e-11 59.3
MS.gene56647.t1 MTR_0001s0360 52.632 57 25 1 69 123 7 63 9.35e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56647.t1 AT5G26660 75.714 70 12 2 55 122 1 67 2.36e-27 103
MS.gene56647.t1 AT4G01680 74.286 70 13 2 55 122 1 67 3.20e-27 101
MS.gene56647.t1 AT4G01680 74.286 70 13 2 55 122 1 67 9.03e-27 102
MS.gene56647.t1 AT1G57560 74.286 70 13 2 55 122 1 67 1.24e-26 101
MS.gene56647.t1 AT1G57560 74.286 70 13 2 55 122 1 67 1.39e-26 100
MS.gene56647.t1 AT1G09540 74.286 70 13 2 55 122 1 67 3.78e-26 100
MS.gene56647.t1 AT3G13890 70.149 67 16 2 58 122 3 67 2.57e-24 95.9
MS.gene56647.t1 AT4G01680 63.415 82 13 3 55 122 1 79 2.39e-23 93.2
MS.gene56647.t1 AT3G12720 75.862 58 12 1 67 122 20 77 4.44e-23 91.7
MS.gene56647.t1 AT1G63910 62.500 72 22 2 55 124 1 69 5.94e-23 92.4
MS.gene56647.t1 AT3G13890 61.842 76 16 3 58 122 3 76 2.15e-21 87.8
MS.gene56647.t1 AT5G52260 67.742 62 18 1 63 122 6 67 1.12e-20 84.7
MS.gene56647.t1 AT3G48920 63.934 61 20 1 64 122 13 73 2.46e-20 83.6
MS.gene56647.t1 AT4G05100 58.824 68 25 2 59 124 4 70 5.21e-20 83.6
MS.gene56647.t1 AT3G08500 61.765 68 24 1 57 122 18 85 9.09e-20 83.2
MS.gene56647.t1 AT5G12870 69.492 59 16 1 66 122 15 73 9.29e-20 82.4
MS.gene56647.t1 AT4G25560 65.000 60 19 1 66 123 7 66 1.59e-19 82.0
MS.gene56647.t1 AT4G21440 57.353 68 25 2 59 124 4 69 1.50e-18 80.1
MS.gene56647.t1 AT3G28470 56.923 65 24 2 61 123 6 68 1.80e-18 79.3
MS.gene56647.t1 AT3G01140 55.882 68 26 2 59 124 4 69 2.84e-18 79.3
MS.gene56647.t1 AT5G54230 64.286 56 18 1 69 122 12 67 4.99e-18 78.2
MS.gene56647.t1 AT3G01140 55.882 68 26 2 59 124 47 112 5.11e-18 79.0
MS.gene56647.t1 AT5G10280 62.069 58 20 1 69 124 12 69 5.37e-18 78.6
MS.gene56647.t1 AT5G65230 63.793 58 19 1 69 124 12 69 7.57e-18 77.8
MS.gene56647.t1 AT4G17785 62.069 58 20 1 69 124 13 70 7.62e-18 78.2
MS.gene56647.t1 AT4G17785 62.069 58 20 1 69 124 13 70 8.49e-18 78.2
MS.gene56647.t1 AT1G79180 59.091 66 23 2 59 122 6 69 8.78e-18 77.4
MS.gene56647.t1 AT5G15310 64.286 56 18 1 69 122 12 67 1.21e-17 76.3
MS.gene56647.t1 AT1G74430 61.290 62 22 1 69 128 12 73 1.62e-17 76.3
MS.gene56647.t1 AT1G34670 62.069 58 20 1 69 124 12 69 1.74e-17 77.0
MS.gene56647.t1 AT3G02940 56.061 66 25 2 59 122 4 67 1.86e-17 76.6
MS.gene56647.t1 AT5G15310 62.069 58 20 1 69 124 12 69 1.92e-17 76.6
MS.gene56647.t1 AT5G15310 62.069 58 20 1 69 124 12 69 2.22e-17 76.6
MS.gene56647.t1 AT3G02940 56.061 66 25 2 59 122 4 67 2.77e-17 76.3
MS.gene56647.t1 AT3G02940 56.061 66 25 2 59 122 4 67 2.77e-17 76.3
MS.gene56647.t1 AT4G28110 52.941 68 28 2 59 124 4 69 2.93e-17 75.9
MS.gene56647.t1 AT5G60890 56.897 58 23 1 67 122 10 67 3.07e-17 75.9
MS.gene56647.t1 AT2G16720 54.930 71 28 2 59 127 4 72 3.27e-17 75.5
MS.gene56647.t1 AT4G34990 68.519 54 15 1 71 122 14 67 3.57e-17 75.5
MS.gene56647.t1 AT4G38620 59.091 66 23 2 59 122 4 67 6.22e-17 75.1
MS.gene56647.t1 AT2G31180 54.545 66 26 2 59 122 4 67 7.35e-17 74.3
MS.gene56647.t1 AT1G18570 60.714 56 20 1 69 122 13 68 7.81e-17 75.5
MS.gene56647.t1 AT3G61250 64.286 56 18 1 69 122 12 67 1.13e-16 74.3
MS.gene56647.t1 AT1G56160 56.061 66 25 2 59 122 6 69 1.30e-16 74.3
MS.gene56647.t1 AT5G56110 57.143 63 23 2 61 121 6 66 1.38e-16 74.3
MS.gene56647.t1 AT1G06180 59.375 64 22 2 61 122 6 67 1.49e-16 73.6
MS.gene56647.t1 AT4G13480 65.455 55 17 1 70 122 7 61 1.61e-16 73.6
MS.gene56647.t1 AT1G74080 57.627 59 23 1 66 122 9 67 1.68e-16 74.3
MS.gene56647.t1 AT4G09460 57.576 66 24 2 59 122 4 67 2.21e-16 72.8
MS.gene56647.t1 AT1G22640 56.061 66 25 2 59 122 4 67 2.53e-16 72.8
MS.gene56647.t1 AT3G24310 63.636 55 18 1 70 122 19 73 3.26e-16 72.8
MS.gene56647.t1 AT5G07690 50.649 77 32 3 55 128 1 74 4.24e-16 73.2
MS.gene56647.t1 AT1G35515 56.061 66 25 2 59 122 4 67 4.27e-16 71.6
MS.gene56647.t1 AT5G16770 60.714 56 20 1 69 122 12 67 4.93e-16 72.8
MS.gene56647.t1 AT5G16770 60.714 56 20 1 69 122 12 67 4.93e-16 72.8
MS.gene56647.t1 AT5G16770 60.714 56 20 1 69 122 12 67 6.79e-16 72.8
MS.gene56647.t1 AT5G16770 60.714 56 20 1 69 122 12 67 6.79e-16 72.8
MS.gene56647.t1 AT5G07700 49.351 77 33 3 55 128 1 74 7.90e-16 72.4
MS.gene56647.t1 AT5G07700 49.351 77 33 3 55 128 1 74 7.90e-16 72.4
MS.gene56647.t1 AT3G12820 55.072 69 27 2 56 122 3 69 9.28e-16 71.2
MS.gene56647.t1 AT1G18710 58.929 56 21 1 69 122 12 67 1.67e-15 70.9
MS.gene56647.t1 AT5G14340 62.500 56 19 1 69 122 24 79 2.22e-15 70.5
MS.gene56647.t1 AT3G30210 63.636 55 18 1 70 122 28 82 2.39e-15 70.5
MS.gene56647.t1 AT3G01530 58.929 56 21 1 69 122 25 80 2.56e-15 69.3
MS.gene56647.t1 AT4G12350 60.714 56 20 1 69 122 12 67 2.90e-15 70.5
MS.gene56647.t1 AT5G61420 50.000 70 30 2 55 122 1 67 3.14e-15 70.9
MS.gene56647.t1 AT3G62610 56.061 66 25 2 59 122 4 67 3.28e-15 70.9
MS.gene56647.t1 AT1G48000 56.140 57 23 1 68 122 31 87 3.36e-15 69.7
MS.gene56647.t1 AT5G49330 59.091 66 23 2 59 122 4 67 3.47e-15 70.9
MS.gene56647.t1 AT5G16600 62.500 56 19 1 69 122 12 67 4.64e-15 70.1
MS.gene56647.t1 AT3G06490 58.929 56 21 1 69 122 19 74 4.76e-15 70.1
MS.gene56647.t1 AT3G23250 51.515 66 28 2 59 122 4 67 5.52e-15 69.7
MS.gene56647.t1 AT1G66230 62.500 56 19 1 69 122 12 67 6.08e-15 69.7
MS.gene56647.t1 AT2G47460 56.061 66 25 2 59 122 4 67 6.25e-15 70.1
MS.gene56647.t1 AT3G27810 57.895 57 22 1 68 122 19 75 7.19e-15 68.6
MS.gene56647.t1 AT5G40350 57.895 57 22 1 68 122 16 72 7.22e-15 68.6
MS.gene56647.t1 AT5G23000 54.545 66 25 3 59 121 4 67 7.65e-15 69.7
MS.gene56647.t1 AT1G66390 53.846 65 28 1 62 124 1 65 8.01e-15 68.9
MS.gene56647.t1 AT4G22680 60.714 56 20 1 69 122 12 67 9.53e-15 68.9
MS.gene56647.t1 AT5G57620 51.515 66 27 3 59 121 4 67 1.29e-14 68.9
MS.gene56647.t1 AT1G66380 52.308 65 29 1 62 124 1 65 1.42e-14 65.5
MS.gene56647.t1 AT1G16490 54.545 66 26 2 59 122 6 69 1.65e-14 68.2
MS.gene56647.t1 AT5G35550 55.172 58 24 1 67 122 12 69 2.45e-14 67.8
MS.gene56647.t1 AT1G66380 52.308 65 29 1 62 124 1 65 3.11e-14 65.1
MS.gene56647.t1 AT3G49690 51.515 66 27 3 59 121 4 67 3.62e-14 67.8
MS.gene56647.t1 AT1G56650 52.308 65 29 1 62 124 1 65 6.13e-14 66.2
MS.gene56647.t1 AT5G65790 51.515 66 27 3 59 121 4 67 6.42e-14 67.4
MS.gene56647.t1 AT5G14750 46.774 62 31 1 63 122 10 71 1.07e-13 65.1
MS.gene56647.t1 AT1G68320 55.172 58 24 1 67 122 17 74 1.15e-13 66.2
MS.gene56647.t1 AT5G52600 48.485 66 31 2 60 122 2 67 1.23e-13 65.1
MS.gene56647.t1 AT2G36890 46.250 80 35 4 48 121 31 108 1.89e-13 65.9
MS.gene56647.t1 AT5G62320 57.143 63 18 1 69 122 13 75 2.21e-13 64.7
MS.gene56647.t1 AT5G62470 53.125 64 26 2 61 122 6 67 2.75e-13 65.5
MS.gene56647.t1 AT3G47600 57.143 56 22 1 69 122 12 67 2.80e-13 65.5
MS.gene56647.t1 AT2G36890 50.000 66 28 3 59 121 4 67 2.82e-13 65.1
MS.gene56647.t1 AT1G08810 57.143 56 22 1 69 122 12 67 3.12e-13 64.7
MS.gene56647.t1 AT1G74650 56.140 57 23 1 68 122 11 67 3.68e-13 65.1
MS.gene56647.t1 AT3G13540 57.143 56 22 1 69 122 23 78 4.43e-13 63.9
MS.gene56647.t1 AT3G27920 45.161 62 32 1 63 122 8 69 7.63e-13 63.2
MS.gene56647.t1 AT1G25340 56.364 55 22 1 70 122 19 73 9.26e-13 63.5
MS.gene56647.t1 AT5G40330 50.909 55 25 1 70 122 13 67 9.92e-13 62.8
MS.gene56647.t1 AT4G37780 51.515 66 27 3 59 121 4 67 1.15e-12 63.5
MS.gene56647.t1 AT5G49620 53.571 56 24 1 69 122 26 81 1.31e-12 63.5
MS.gene56647.t1 AT5G49620 53.571 56 24 1 69 122 26 81 1.60e-12 63.2
MS.gene56647.t1 AT3G28910 55.357 56 23 1 69 122 12 67 1.73e-12 63.2
MS.gene56647.t1 AT2G47190 48.214 56 27 1 69 122 20 75 3.30e-12 62.0
MS.gene56647.t1 AT3G53200 49.180 61 29 1 64 122 4 64 5.05e-12 61.2
MS.gene56647.t1 AT5G55020 53.571 56 24 1 69 122 26 81 5.11e-12 62.0
MS.gene56647.t1 AT5G06100 43.750 80 41 3 46 122 9 87 6.08e-12 61.6
MS.gene56647.t1 AT5G06100 43.750 80 41 3 46 122 9 87 6.08e-12 61.6
MS.gene56647.t1 AT5G06100 43.750 80 41 3 46 122 9 87 6.08e-12 61.6
MS.gene56647.t1 AT5G06100 43.750 80 41 3 46 122 9 87 6.08e-12 61.6
MS.gene56647.t1 AT5G06100 43.750 80 41 3 46 122 9 87 6.40e-12 61.6
MS.gene56647.t1 AT5G59780 44.928 69 36 1 62 128 1 69 9.15e-12 60.5
MS.gene56647.t1 AT5G62470 53.125 64 25 3 61 122 6 66 1.03e-11 60.8
MS.gene56647.t1 AT1G66370 49.231 65 31 1 62 124 1 65 1.14e-11 60.1
MS.gene56647.t1 AT2G32460 51.786 56 25 1 69 122 18 73 2.06e-11 60.1
MS.gene56647.t1 AT2G32460 51.786 56 25 1 69 122 6 61 2.49e-11 60.1
MS.gene56647.t1 AT2G26960 52.941 51 22 1 74 122 25 75 2.76e-11 59.7
MS.gene56647.t1 AT3G46130 50.909 55 25 1 70 122 10 64 2.83e-11 59.3
MS.gene56647.t1 AT3G60460 48.387 62 30 1 62 121 4 65 4.06e-11 58.9
MS.gene56647.t1 AT4G26930 51.786 56 25 1 69 122 19 74 6.42e-11 58.9

Find 28 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAGCTTCTCATCTTCTTC+AGG 0.287173 2.1:+27349899 None:intergenic
TTAATATTACCAGCTAGTTT+AGG 0.344561 2.1:+27349839 None:intergenic
CCATGTTTGGTGTTGGGTAT+TGG 0.358099 2.1:-27349871 MS.gene56647:CDS
GATCTTTCTCTCTTCAAATC+AGG 0.358949 2.1:+27349658 None:intergenic
AAGCTTTACATAACCATGTT+TGG 0.365135 2.1:-27349884 MS.gene56647:CDS
TTACATAGAACATACCTTAT+GGG 0.397491 2.1:+27353255 None:intergenic
TACATAACCATGTTTGGTGT+TGG 0.418098 2.1:-27349878 MS.gene56647:CDS
ACATAACCATGTTTGGTGTT+GGG 0.427958 2.1:-27349877 MS.gene56647:CDS
GCTAGCAGAAACATAATTGA+AGG 0.443801 2.1:-27352922 MS.gene56647:intron
CATAGTGGATAAGGCTCTGC+TGG 0.448021 2.1:-27350670 MS.gene56647:intron
TAGTAGACATGCAGAATGTA+TGG 0.449632 2.1:-27350604 MS.gene56647:CDS
TAAGATGGATAAACTATTTG+AGG 0.452664 2.1:-27349681 MS.gene56647:CDS
GAGGACACTAGAGTGGGAAT+TGG 0.456363 2.1:-27352962 MS.gene56647:CDS
TATGATAATTTCATCCCATA+AGG 0.480276 2.1:-27353269 MS.gene56647:intron
AAAGCTTCTCATCTTCTTCA+GGG 0.489645 2.1:+27349900 None:intergenic
GAAAGAGTTGTAGATTAAGA+TGG 0.500179 2.1:-27349696 MS.gene56647:CDS
AGTTCAGTTCCTAAACTAGC+TGG 0.517760 2.1:-27349848 MS.gene56647:intron
ATTGCAGGGTTGCAAAGGTA+TGG 0.521152 2.1:-27349718 MS.gene56647:intron
CCAATACCCAACACCAAACA+TGG 0.522805 2.1:+27349871 None:intergenic
CACTAGAGTGGGAATTGGCA+AGG 0.548048 2.1:-27352957 MS.gene56647:CDS
TATGTATTGCAGGGTTGCAA+AGG 0.552250 2.1:-27349723 MS.gene56647:intron
TGCAGAATGTATGGAGCGAT+CGG 0.568868 2.1:-27350595 MS.gene56647:CDS
GAGGAGAGAGGACACTAGAG+TGG 0.575461 2.1:-27352969 MS.gene56647:CDS
AGGAGAGAGGACACTAGAGT+GGG 0.604291 2.1:-27352968 MS.gene56647:CDS
AAGCTTCTCATCTTCTTCAG+GGG 0.617332 2.1:+27349901 None:intergenic
ACTAGAGTGGGAATTGGCAA+GGG 0.655908 2.1:-27352956 MS.gene56647:CDS
TGTCTACTAATATCTCGAAG+AGG 0.661454 2.1:+27350618 None:intergenic
AGAATGTATGGAGCGATCGG+CGG 0.684544 2.1:-27350592 MS.gene56647:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATAAATTTATTTATCT+TGG + chr2.1:27351773-27351792 None:intergenic 10.0%
!! TAAAATTTACTTAAAACTAA+TGG - chr2.1:27350909-27350928 MS.gene56647:intron 10.0%
!! TATGTAAAATATAATAATCA+TGG + chr2.1:27352192-27352211 None:intergenic 10.0%
!! AAAAACTAAGAAAATGTTTA+TGG - chr2.1:27352982-27353001 MS.gene56647:CDS 15.0%
!! AAATTGAATGTAAAAATTGT+AGG - chr2.1:27349685-27349704 MS.gene56647:CDS 15.0%
!! ATAAAAATTCATTTGTCTAA+TGG - chr2.1:27352013-27352032 MS.gene56647:intron 15.0%
!! TTGAAAATATACTAAAGATT+GGG + chr2.1:27352793-27352812 None:intergenic 15.0%
!! TTGTAAAGTAAAAAAAGATA+AGG + chr2.1:27353124-27353143 None:intergenic 15.0%
!!! AAACTTTTCATATCATAAAT+TGG + chr2.1:27350094-27350113 None:intergenic 15.0%
!!! AACTAATTAAAACTCAATTT+TGG + chr2.1:27350598-27350617 None:intergenic 15.0%
!!! CTATATTTTTTCTATTGAAA+TGG + chr2.1:27351422-27351441 None:intergenic 15.0%
!!! TGATTGATTTTTAATGAATT+TGG - chr2.1:27350267-27350286 MS.gene56647:intron 15.0%
!! AATGAAATCTAAGAAATTTG+GGG - chr2.1:27352654-27352673 MS.gene56647:intron 20.0%
!! AATTTATTTATCTTGGTTGT+TGG + chr2.1:27351766-27351785 None:intergenic 20.0%
!! ATATCATTCATACAGTTATA+CGG - chr2.1:27350412-27350431 MS.gene56647:intron 20.0%
!! CAATGAAATCTAAGAAATTT+GGG - chr2.1:27352653-27352672 MS.gene56647:intron 20.0%
!! GTTATATGTGCTTATTATAT+AGG + chr2.1:27351547-27351566 None:intergenic 20.0%
!! GTTGAAAATATACTAAAGAT+TGG + chr2.1:27352794-27352813 None:intergenic 20.0%
!! TACTTTATGAATACTAATCA+TGG + chr2.1:27351457-27351476 None:intergenic 20.0%
!! TAGTTTATGCAAATTAAGAT+AGG - chr2.1:27350613-27350632 MS.gene56647:CDS 20.0%
!! TCAATGAAATCTAAGAAATT+TGG - chr2.1:27352652-27352671 MS.gene56647:intron 20.0%
!! TTCATAAAGTAATCATATCT+TGG - chr2.1:27351466-27351485 MS.gene56647:intron 20.0%
!!! AAGTATTTTCATTTTCATAG+TGG - chr2.1:27352222-27352241 MS.gene56647:intron 20.0%
!!! ACTTTGATTTTTAATGACAT+TGG - chr2.1:27350345-27350364 MS.gene56647:intron 20.0%
!!! ATGAAAAGTTTTTTCTTTGT+GGG - chr2.1:27350103-27350122 MS.gene56647:intron 20.0%
!!! CAGCTATAAATAATTTTGTA+TGG - chr2.1:27350051-27350070 MS.gene56647:intron 20.0%
!!! GTCATTAAAAATCAAAGTTT+TGG + chr2.1:27350343-27350362 None:intergenic 20.0%
!!! TAAAACTCAATTTTGGATTT+AGG + chr2.1:27350591-27350610 None:intergenic 20.0%
!!! TATGAAAAGTTTTTTCTTTG+TGG - chr2.1:27350102-27350121 MS.gene56647:intron 20.0%
!!! TTTAAAATTAGTGATTTGCT+GGG - chr2.1:27350164-27350183 MS.gene56647:intron 20.0%
!!! TTTGCTTTAAACAACAAAAA+TGG + chr2.1:27352965-27352984 None:intergenic 20.0%
! AAAAACAAAGCAATTTGCAT+CGG + chr2.1:27351812-27351831 None:intergenic 25.0%
! AAGTTAGACAATCACATAAA+TGG - chr2.1:27352514-27352533 MS.gene56647:intron 25.0%
! ACAATCTTTATGTGGAAAAA+GGG - chr2.1:27352711-27352730 MS.gene56647:intron 25.0%
! ACTAAAGATTGGGTAAAAAA+AGG + chr2.1:27352783-27352802 None:intergenic 25.0%
! CTAACTTAAATCTAACAGAA+GGG + chr2.1:27352501-27352520 None:intergenic 25.0%
! TAAGATGGATAAACTATTTG+AGG - chr2.1:27353226-27353245 MS.gene56647:intron 25.0%
! TCTAACTTAAATCTAACAGA+AGG + chr2.1:27352502-27352521 None:intergenic 25.0%
! TGTTTCTTAATTATGGAGAA+AGG + chr2.1:27352896-27352915 None:intergenic 25.0%
! TTACATAGAACATACCTTAT+GGG + chr2.1:27349655-27349674 None:intergenic 25.0%
! TTCAAAGTTGCTTAAAGTTT+GGG - chr2.1:27351301-27351320 MS.gene56647:intron 25.0%
! TTGTAAGGACAATAGAAAAA+AGG + chr2.1:27352932-27352951 None:intergenic 25.0%
! TTGTATAATTGTTCTGCAAA+AGG + chr2.1:27350463-27350482 None:intergenic 25.0%
! TTTACATAGAACATACCTTA+TGG + chr2.1:27349656-27349675 None:intergenic 25.0%
! TTTCAAAGTTGCTTAAAGTT+TGG - chr2.1:27351300-27351319 MS.gene56647:intron 25.0%
! TTTCGAATGTTACACATATA+AGG + chr2.1:27351256-27351275 None:intergenic 25.0%
! TTTCTACATAGAGAAACAAA+TGG + chr2.1:27352422-27352441 None:intergenic 25.0%
! TTTGCAGAACAATTATACAA+TGG - chr2.1:27350463-27350482 MS.gene56647:intron 25.0%
!! AGGAGTTTTTCTTTTATTGT+TGG - chr2.1:27351349-27351368 MS.gene56647:intron 25.0%
!! AGGATACTGTTTCTTAATTA+TGG + chr2.1:27352903-27352922 None:intergenic 25.0%
!! CTTGGTTGGTATTTATATAA+GGG - chr2.1:27352621-27352640 MS.gene56647:intron 25.0%
!! GTTTAAAATTAGTGATTTGC+TGG - chr2.1:27350163-27350182 MS.gene56647:intron 25.0%
!! TCTTGGTTGGTATTTATATA+AGG - chr2.1:27352620-27352639 MS.gene56647:intron 25.0%
!! TTAATATTACCAGCTAGTTT+AGG + chr2.1:27353071-27353090 None:intergenic 25.0%
!! TTGTTTCTCTATGTAGAAAA+AGG - chr2.1:27352423-27352442 MS.gene56647:intron 25.0%
!!! GATAAGTTTTATGTGTTTGT+TGG - chr2.1:27350136-27350155 MS.gene56647:intron 25.0%
!!! GCTTAATTTTTTTTGTCTGT+AGG - chr2.1:27351329-27351348 MS.gene56647:intron 25.0%
!!! GGCATGTTTTAGAAAAATTA+AGG - chr2.1:27352675-27352694 MS.gene56647:intron 25.0%
!!! TAAATGGCACATTTATTTTC+TGG - chr2.1:27352530-27352549 MS.gene56647:intron 25.0%
!!! TCACTTTTTTATGTATTGCA+GGG - chr2.1:27353175-27353194 MS.gene56647:intron 25.0%
!!! TGGTTTTAGCATAAATTTTC+AGG - chr2.1:27349916-27349935 MS.gene56647:CDS 25.0%
!!! TTTCATTTTCATAGTGGATA+AGG - chr2.1:27352228-27352247 MS.gene56647:intron 25.0%
!!! TTTTAGCATAAATTTTCAGG+AGG - chr2.1:27349919-27349938 MS.gene56647:CDS 25.0%
!!! TTTTTAATGACATTGGTTGA+TGG - chr2.1:27350352-27350371 MS.gene56647:intron 25.0%
AAGCTTTACATAACCATGTT+TGG - chr2.1:27353023-27353042 MS.gene56647:intron 30.0%
AATCTTTATGTGGAAAAAGG+GGG - chr2.1:27352713-27352732 MS.gene56647:intron 30.0%
AATGCAAGACAATCTTTATG+TGG - chr2.1:27352703-27352722 MS.gene56647:intron 30.0%
AATGGAAATGTGATGTAAAG+TGG - chr2.1:27351096-27351115 MS.gene56647:intron 30.0%
AATGTTACACATATAAGGAG+AGG + chr2.1:27351251-27351270 None:intergenic 30.0%
ACATATCATTGTACACATCT+TGG - chr2.1:27352603-27352622 MS.gene56647:intron 30.0%
ATATAGTGAAATTACCCTTG+TGG + chr2.1:27352844-27352863 None:intergenic 30.0%
ATGCACCATTATCACATATA+TGG + chr2.1:27350666-27350685 None:intergenic 30.0%
CAATAGAAAAAAGGACACAA+AGG + chr2.1:27352923-27352942 None:intergenic 30.0%
CAATCTTTATGTGGAAAAAG+GGG - chr2.1:27352712-27352731 MS.gene56647:intron 30.0%
CTCAGATGCATACAAATTAA+TGG + chr2.1:27350499-27350518 None:intergenic 30.0%
CTTGTGTGACATTTACTAAT+TGG + chr2.1:27351047-27351066 None:intergenic 30.0%
GAAAGAGTTGTAGATTAAGA+TGG - chr2.1:27353211-27353230 MS.gene56647:intron 30.0%
GACAATCTTTATGTGGAAAA+AGG - chr2.1:27352710-27352729 MS.gene56647:intron 30.0%
GGTTTATCTATACAGTAACA+TGG - chr2.1:27349896-27349915 MS.gene56647:CDS 30.0%
GTAGTTATCAGTCAGTTATT+CGG - chr2.1:27352054-27352073 MS.gene56647:intron 30.0%
GTTTATGTGTTTACGAATTG+AGG - chr2.1:27351148-27351167 MS.gene56647:intron 30.0%
TCTATTGTCCTTACAAACAT+GGG - chr2.1:27352936-27352955 MS.gene56647:CDS 30.0%
TGCATACTAAACAACTTTGT+TGG - chr2.1:27350686-27350705 MS.gene56647:intron 30.0%
TGCTTCCATATATGTGATAA+TGG - chr2.1:27350658-27350677 MS.gene56647:CDS 30.0%
TTCTATTGTCCTTACAAACA+TGG - chr2.1:27352935-27352954 MS.gene56647:CDS 30.0%
TTTCTCTATGTAGAAAAAGG+AGG - chr2.1:27352426-27352445 MS.gene56647:intron 30.0%
! ATCCACTTTCACTGTATTTT+TGG - chr2.1:27351980-27351999 MS.gene56647:intron 30.0%
! CAATTTTGGATTTAGGTGAA+TGG + chr2.1:27350584-27350603 None:intergenic 30.0%
! CACTAACTTCATCTTTTTGA+TGG - chr2.1:27350724-27350743 MS.gene56647:intron 30.0%
! TAAAAGTTTCGCATTGATCT+CGG - chr2.1:27352118-27352137 MS.gene56647:intron 30.0%
! TCCACTTTCACTGTATTTTT+GGG - chr2.1:27351981-27352000 MS.gene56647:intron 30.0%
! TGTATGACTTTTGTATCTAC+TGG - chr2.1:27349875-27349894 MS.gene56647:CDS 30.0%
!! AGTTATTCGGATTAGTTAGA+GGG - chr2.1:27352067-27352086 MS.gene56647:intron 30.0%
!! TACAAATTAATGGACTTCCA+TGG + chr2.1:27350489-27350508 None:intergenic 30.0%
!! TCACTGTCATCTAAAGTTTT+AGG + chr2.1:27350380-27350399 None:intergenic 30.0%
!! TTTTTCTTTGTGGGTTGAAT+AGG - chr2.1:27350112-27350131 MS.gene56647:intron 30.0%
!!! CTCACTTTTTTATGTATTGC+AGG - chr2.1:27353174-27353193 MS.gene56647:intron 30.0%
AAACATCTTCCACCAATCAA+AGG - chr2.1:27352461-27352480 MS.gene56647:intron 35.0%
AAAGCTTCTCATCTTCTTCA+GGG + chr2.1:27353010-27353029 None:intergenic 35.0%
AAATTAAGATAGGTAGTCCC+AGG - chr2.1:27350623-27350642 MS.gene56647:CDS 35.0%
AACACATAAACCATACTCAG+CGG + chr2.1:27351139-27351158 None:intergenic 35.0%
AAGTTAGTCCAAAATGCAAG+TGG + chr2.1:27349854-27349873 None:intergenic 35.0%
AATAGCAACAAATACAGTGC+AGG + chr2.1:27351885-27351904 None:intergenic 35.0%
AGTGTCCTTACTGTAATATG+TGG - chr2.1:27351697-27351716 MS.gene56647:intron 35.0%
AGTTTGGCTAACTGTAATGT+AGG - chr2.1:27350806-27350825 MS.gene56647:intron 35.0%
ATCATTGTACACATCTTGGT+TGG - chr2.1:27352607-27352626 MS.gene56647:intron 35.0%
CATTGCTAGCATTTGACATT+TGG - chr2.1:27352368-27352387 MS.gene56647:intron 35.0%
CTTTGCGTAGAAATGTTTGT+TGG - chr2.1:27350206-27350225 MS.gene56647:intron 35.0%
GAACAATTATACAATGGCCA+TGG - chr2.1:27350469-27350488 MS.gene56647:intron 35.0%
GATCTTTCTCTCTTCAAATC+AGG + chr2.1:27353252-27353271 None:intergenic 35.0%
GCTAGCAGAAACATAATTGA+AGG - chr2.1:27349985-27350004 MS.gene56647:intron 35.0%
GTGATTTGAATATGAGAACG+AGG - chr2.1:27351394-27351413 MS.gene56647:intron 35.0%
GTGCTTATTATATAGGTGCA+TGG + chr2.1:27351540-27351559 None:intergenic 35.0%
GTTTCTACAATACCCTTCAT+CGG - chr2.1:27351905-27351924 MS.gene56647:intron 35.0%
TAAAGCTTCTCATCTTCTTC+AGG + chr2.1:27353011-27353030 None:intergenic 35.0%
TAGAGATGCAAGAGTTATGT+GGG - chr2.1:27350750-27350769 MS.gene56647:intron 35.0%
TAGTAGACATGCAGAATGTA+TGG - chr2.1:27352303-27352322 MS.gene56647:intron 35.0%
TATTTATCTTGGTTGTTGGC+TGG + chr2.1:27351762-27351781 None:intergenic 35.0%
TCCCAAAAATACAGTGAAAG+TGG + chr2.1:27351985-27352004 None:intergenic 35.0%
TGCACAGTGAAAAAGAAAAG+AGG - chr2.1:27349771-27349790 MS.gene56647:intron 35.0%
TGTCAATGACAAAACCACAA+GGG - chr2.1:27352827-27352846 MS.gene56647:intron 35.0%
TGTCTACTAATATCTCGAAG+AGG + chr2.1:27352292-27352311 None:intergenic 35.0%
TTAGAGATGCAAGAGTTATG+TGG - chr2.1:27350749-27350768 MS.gene56647:intron 35.0%
TTATAAACAACCTGCAGAAG+AGG + chr2.1:27351662-27351681 None:intergenic 35.0%
TTATGTGGGATCAAAAGACT+GGG - chr2.1:27350764-27350783 MS.gene56647:intron 35.0%
! ATTTATCTTGGTTGTTGGCT+GGG + chr2.1:27351761-27351780 None:intergenic 35.0%
! ATTTGCATCGGTCAACAAAA+TGG + chr2.1:27351800-27351819 None:intergenic 35.0%
! TAGAGGGTATGTGTGTAAAT+AGG - chr2.1:27352083-27352102 MS.gene56647:intron 35.0%
! TGTTATGACCACTTGCATTT+TGG - chr2.1:27349843-27349862 MS.gene56647:intron 35.0%
! TTGTATGCATCTGAGACATT+TGG - chr2.1:27350504-27350523 MS.gene56647:intron 35.0%
!! AAACAACTTTGTTGGTGACT+TGG - chr2.1:27350694-27350713 MS.gene56647:intron 35.0%
!! AAAGGTTCTGAACAATGAAG+TGG + chr2.1:27352878-27352897 None:intergenic 35.0%
!! ACATAACCATGTTTGGTGTT+GGG - chr2.1:27353030-27353049 MS.gene56647:intron 35.0%
!! ATAAATTTTCAGGAGGAGAG+AGG - chr2.1:27349926-27349945 MS.gene56647:CDS 35.0%
!! CAGTTATTCGGATTAGTTAG+AGG - chr2.1:27352066-27352085 MS.gene56647:intron 35.0%
!! GTTTTATGTGTTTGTTGGTG+AGG - chr2.1:27350141-27350160 MS.gene56647:intron 35.0%
!! TACATAACCATGTTTGGTGT+TGG - chr2.1:27353029-27353048 MS.gene56647:intron 35.0%
AAGCACAAGACTAAAGACCT+GGG + chr2.1:27350643-27350662 None:intergenic 40.0%
AAGCTTCTCATCTTCTTCAG+GGG + chr2.1:27353009-27353028 None:intergenic 40.0%
AGGTGCATGGTCTCAAATAT+TGG + chr2.1:27351527-27351546 None:intergenic 40.0%
AGTTCAGTTCCTAAACTAGC+TGG - chr2.1:27353059-27353078 MS.gene56647:intron 40.0%
CAGATTTCTGAGTTGCAAGT+AGG - chr2.1:27349807-27349826 MS.gene56647:intron 40.0%
CCATTACAACTAACCTTTCC+TGG + chr2.1:27351081-27351100 None:intergenic 40.0%
CTGAGCCACATATTACAGTA+AGG + chr2.1:27351705-27351724 None:intergenic 40.0%
GAAAGCCTATTTATCCTGAC+TGG - chr2.1:27351272-27351291 MS.gene56647:intron 40.0%
GAAGAGGTAGCTACAGAAAA+AGG + chr2.1:27351646-27351665 None:intergenic 40.0%
GTGTCAATGACAAAACCACA+AGG - chr2.1:27352826-27352845 MS.gene56647:intron 40.0%
GTTATGTGGGATCAAAAGAC+TGG - chr2.1:27350763-27350782 MS.gene56647:intron 40.0%
GTTCACCAGTCAGGATAAAT+AGG + chr2.1:27351280-27351299 None:intergenic 40.0%
TATGTATTGCAGGGTTGCAA+AGG - chr2.1:27353184-27353203 MS.gene56647:intron 40.0%
TGACGTAGTGTACCTTTGAT+TGG + chr2.1:27352476-27352495 None:intergenic 40.0%
! ACTTTGAAAGTTCACCAGTC+AGG + chr2.1:27351289-27351308 None:intergenic 40.0%
! CCAGGAAAGGTTAGTTGTAA+TGG - chr2.1:27351078-27351097 MS.gene56647:intron 40.0%
! TTTATCTTGGTTGTTGGCTG+GGG + chr2.1:27351760-27351779 None:intergenic 40.0%
!! GGAGATTGGTCTGTTATTGA+TGG - chr2.1:27352734-27352753 MS.gene56647:intron 40.0%
!!! GTCAACCACTTTTGAGACAA+CGG + chr2.1:27351595-27351614 None:intergenic 40.0%
AATGGCGACCCATGTTTGTA+AGG + chr2.1:27352947-27352966 None:intergenic 45.0%
ACTAGAGTGGGAATTGGCAA+GGG - chr2.1:27349951-27349970 MS.gene56647:intron 45.0%
ATCAAAAGACTGGGCGTTCA+AGG - chr2.1:27350773-27350792 MS.gene56647:intron 45.0%
ATGGTTCAATGCAGATCCTG+AGG + chr2.1:27350565-27350584 None:intergenic 45.0%
ATGTCTGTTGCATGTGGGTT+TGG + chr2.1:27350941-27350960 None:intergenic 45.0%
ATGTGGAAAAAGGGGGAGAT+TGG - chr2.1:27352720-27352739 MS.gene56647:intron 45.0%
ATTGCAGGGTTGCAAAGGTA+TGG - chr2.1:27353189-27353208 MS.gene56647:intron 45.0%
CAACTAACCTTTCCTGGTTC+AGG + chr2.1:27351075-27351094 None:intergenic 45.0%
CCAATACCCAACACCAAACA+TGG + chr2.1:27353039-27353058 None:intergenic 45.0%
CCTTCATGTCTGTTGCATGT+GGG + chr2.1:27350946-27350965 None:intergenic 45.0%
CGTAGTGTACCTTTGATTGG+TGG + chr2.1:27352473-27352492 None:intergenic 45.0%
CTGAACAATGAAGTGGTCAC+TGG + chr2.1:27352871-27352890 None:intergenic 45.0%
GAAGCACAAGACTAAAGACC+TGG + chr2.1:27350644-27350663 None:intergenic 45.0%
GCAACTCAGAAATCTGTCAC+TGG + chr2.1:27349803-27349822 None:intergenic 45.0%
GCTTTCCGTTGTCTCAAAAG+TGG - chr2.1:27351587-27351606 MS.gene56647:intron 45.0%
TCAAAAGACTGGGCGTTCAA+GGG - chr2.1:27350774-27350793 MS.gene56647:intron 45.0%
TCAAGGGGATGTGGAAAGTT+TGG - chr2.1:27350790-27350809 MS.gene56647:intron 45.0%
TCCTTCATGTCTGTTGCATG+TGG + chr2.1:27350947-27350966 None:intergenic 45.0%
TCTCGGCGAAGAAAAAGATG+TGG - chr2.1:27352135-27352154 MS.gene56647:intron 45.0%
TGCAGAATGTATGGAGCGAT+CGG - chr2.1:27352312-27352331 MS.gene56647:intron 45.0%
TTAGTGTCTACCGCTGAGTA+TGG - chr2.1:27351126-27351145 MS.gene56647:intron 45.0%
!! ACTTTGTTGGTGACTTGGCA+TGG - chr2.1:27350699-27350718 MS.gene56647:intron 45.0%
!! CCATGTTTGGTGTTGGGTAT+TGG - chr2.1:27353036-27353055 MS.gene56647:intron 45.0%
!!! AGTAAATTTTAATTATAAAA+CGG + chr2.1:27350900-27350919 None:intergenic 5.0%
ACACAAGCATGTCCTGAACC+AGG - chr2.1:27351060-27351079 MS.gene56647:intron 50.0%
AGAATGTATGGAGCGATCGG+CGG - chr2.1:27352315-27352334 MS.gene56647:intron 50.0%
AGCATGTCCTGAACCAGGAA+AGG - chr2.1:27351065-27351084 MS.gene56647:intron 50.0%
AGGAGAGAGGACACTAGAGT+GGG - chr2.1:27349939-27349958 MS.gene56647:intron 50.0%
CAAAAGACTGGGCGTTCAAG+GGG - chr2.1:27350775-27350794 MS.gene56647:intron 50.0%
CACTAGAGTGGGAATTGGCA+AGG - chr2.1:27349950-27349969 MS.gene56647:intron 50.0%
CATTTGGTCCTCCACCAGTT+TGG - chr2.1:27350520-27350539 MS.gene56647:intron 50.0%
CCCACATGCAACAGACATGA+AGG - chr2.1:27350943-27350962 MS.gene56647:intron 50.0%
GAGGACACTAGAGTGGGAAT+TGG - chr2.1:27349945-27349964 MS.gene56647:intron 50.0%
TCTGTAGCTACCTCTTCTGC+AGG - chr2.1:27351649-27351668 MS.gene56647:intron 50.0%
TGCAGATCCTGAGGCAATCA+TGG + chr2.1:27350556-27350575 None:intergenic 50.0%
!! CATAGTGGATAAGGCTCTGC+TGG - chr2.1:27352237-27352256 MS.gene56647:intron 50.0%
!! TGTCTGCTAGCACCGATGAA+GGG + chr2.1:27351920-27351939 None:intergenic 50.0%
!! TTGTCTGCTAGCACCGATGA+AGG + chr2.1:27351921-27351940 None:intergenic 50.0%
ATGGCACAAGCCCTCCAAAC+TGG + chr2.1:27350537-27350556 None:intergenic 55.0%
GAGGAGAGAGGACACTAGAG+TGG - chr2.1:27349938-27349957 MS.gene56647:intron 55.0%
GCTTGTGCCATGATTGCCTC+AGG - chr2.1:27350546-27350565 MS.gene56647:intron 55.0%
TGGTCCTCCACCAGTTTGGA+GGG - chr2.1:27350524-27350543 MS.gene56647:intron 55.0%
TTGGTCCTCCACCAGTTTGG+AGG - chr2.1:27350523-27350542 MS.gene56647:intron 55.0%
ACTGGGCGTTCAAGGGGATG+TGG - chr2.1:27350781-27350800 MS.gene56647:intron 60.0%
CAAGCCCTCCAAACTGGTGG+AGG + chr2.1:27350531-27350550 None:intergenic 60.0%
GCACAAGCCCTCCAAACTGG+TGG + chr2.1:27350534-27350553 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 27349639 27353290 27349639 ID=MS.gene56647
chr2.1 mRNA 27349639 27353290 27349639 ID=MS.gene56647.t1;Parent=MS.gene56647
chr2.1 exon 27353270 27353290 27353270 ID=MS.gene56647.t1.exon1;Parent=MS.gene56647.t1
chr2.1 CDS 27353270 27353290 27353270 ID=cds.MS.gene56647.t1;Parent=MS.gene56647.t1
chr2.1 exon 27352923 27353004 27352923 ID=MS.gene56647.t1.exon2;Parent=MS.gene56647.t1
chr2.1 CDS 27352923 27353004 27352923 ID=cds.MS.gene56647.t1;Parent=MS.gene56647.t1
chr2.1 exon 27350593 27350687 27350593 ID=MS.gene56647.t1.exon3;Parent=MS.gene56647.t1
chr2.1 CDS 27350593 27350687 27350593 ID=cds.MS.gene56647.t1;Parent=MS.gene56647.t1
chr2.1 exon 27349849 27349948 27349849 ID=MS.gene56647.t1.exon4;Parent=MS.gene56647.t1
chr2.1 CDS 27349849 27349948 27349849 ID=cds.MS.gene56647.t1;Parent=MS.gene56647.t1
chr2.1 exon 27349639 27349733 27349639 ID=MS.gene56647.t1.exon5;Parent=MS.gene56647.t1
chr2.1 CDS 27349639 27349733 27349639 ID=cds.MS.gene56647.t1;Parent=MS.gene56647.t1
Gene Sequence

>MS.gene56647

ATGATAATTTCATCCCATAAGGTATGTTCTATGTAAATTTATATTTAAATTGAATGTAAAAATTGTAGGCTAAAAATATTGATGCTGTAATTGTTTATATTAATAGATTGTCTTGATAAAGAAATGCTGAAATGCACAGTGAAAAAGAAAAGAGGTGTTATCCAGTGACAGATTTCTGAGTTGCAAGTAGGCATATGTTAATAATGTTATGACCACTTGCATTTTGGACTAACTTTTGTATGACTTTTGTATCTACTGGTTTATCTATACAGTAACATGGTTTTAGCATAAATTTTCAGGAGGAGAGAGGACACTAGAGTGGGAATTGGCAAGGGTAAAAGTTTCTGCTAGCAGAAACATAATTGAAGGTAAATTACTTTTTTCTATGTAAGCATATAAAAAATCAAATTTTCAGCTATAAATAATTTTGTATGGAAATTTACTTTGTGTTACCAATTTATGATATGAAAAGTTTTTTCTTTGTGGGTTGAATAGGTGATAAGTTTTATGTGTTTGTTGGTGAGGTTTAAAATTAGTGATTTGCTGGGTTTGTTGATGATAAGTTTTCTTTGCGTAGAAATGTTTGTTGGATACTTAAATGAATTTTCTTTGTGTAGACTTGAAAGTTTGATTGATTTTTAATGAATTTGGTTGATGAATCTAATTTTTTTACGATGAGACGTAGATTTGTGATTCTTTATCCAAAACTTTGATTTTTAATGACATTGGTTGATGGATCCTAAAACTTTAGATGACAGTGAAAATTGAAACTTATATCATTCATACAGTTATACGGAAGATATATTGATTAGAACTTGATACCTTTTGCAGAACAATTATACAATGGCCATGGAAGTCCATTAATTTGTATGCATCTGAGACATTTGGTCCTCCACCAGTTTGGAGGGCTTGTGCCATGATTGCCTCAGGATCTGCATTGAACCATTCACCTAAATCCAAAATTGAGTTTTAATTAGTTTATGCAAATTAAGATAGGTAGTCCCAGGTCTTTAGTCTTGTGCTTCCATATATGTGATAATGGTGCATTGCATACTAAACAACTTTGTTGGTGACTTGGCATGGCTCACTAACTTCATCTTTTTGATGGTTTTAGAGATGCAAGAGTTATGTGGGATCAAAAGACTGGGCGTTCAAGGGGATGTGGAAAGTTTGGCTAACTGTAATGTAGGATTTGAAAAGTTCATCTTAATATTTTCTTATGCTTTTGTTTTGTGTTTACTTTTTCATAAAATGCAAGCCGTTTTATAATTAAAATTTACTTAAAACTAATGGTTATTTCCAAACCCACATGCAACAGACATGAAGGAAATCATATGTAGAAGTTATTTCAGTGAAACAAATTATCTTCTTCTCATTCATTATATATTATATATGTGTGTCTAAACCAATTAGTAAATGTCACACAAGCATGTCCTGAACCAGGAAAGGTTAGTTGTAATGGAAATGTGATGTAAAGTGGTAGTCTTTTAGTGTCTACCGCTGAGTATGGTTTATGTGTTTACGAATTGAGGTTCTAAGATAAATTGAAGAACTAATAGTTGTTAGCTTCTGTAACTATCAGAATAAGTATTCTATTTTATGCATCAGACCTCTCCTTATATGTGTAACATTCGAAAGCCTATTTATCCTGACTGGTGAACTTTCAAAGTTGCTTAAAGTTTGGGAATGTGCTTAATTTTTTTTGTCTGTAGGAGTTTTTCTTTTATTGTTGGTTATTTTTCTTTCACTGTTATTGTGATTTGAATATGAGAACGAGGCTCCATTTCAATAGAAAAAATATAGCATCTCTAACTACCATGATTAGTATTCATAAAGTAATCATATCTTGGCAGATAGTATAGTATATCTCTTGTGAAAAACATGACCAATATTTGAGACCATGCACCTATATAATAAGCACATATAACTTTTTGAAAGCAGCAGCTTTGCTTTCCGTTGTCTCAAAAGTGGTTGACTTCATTGCTGTCTTAGAATATATATCAACCTTTTTCTGTAGCTACCTCTTCTGCAGGTTGTTTATAATTTTACATACAGTTCAGTGTCCTTACTGTAATATGTGGCTCAGCTGCATCAGAATTCATAATAGCATGTTCTCTACCCCAGCCAACAACCAAGATAAATAAATTTATTTACTTTACCATTTTGTTGACCGATGCAAATTGCTTTGTTTTTGTTGTTTTACTTGACTTTTTTTACTCTTAAATATAAGCAATCTTCAATCACCTGCACTGTATTTGTTGCTATTGTTTCTACAATACCCTTCATCGGTGCTAGCAGACAATTGAAATTAGAATGACACTTAGTTTTGCAGACAATTGATATCCACTTTCACTGTATTTTTGGGAATGTGCTTATAAAAATTCATTTGTCTAATGGCTAATTAGAGTAGTTAATGTAGTTATCAGTCAGTTATTCGGATTAGTTAGAGGGTATGTGTGTAAATAGGAGAACACAATTATAAAAGTTTCGCATTGATCTCGGCGAAGAAAAAGATGTGGTAAACTTATCAGACAATTTTTTAATTGTTGTCCATGATTATTATATTTTACATACTTATTCTGAAAGTATTTTCATTTTCATAGTGGATAAGGCTCTGCTGGAAGATGATTATCTTGATCATCGAACATTACCTCTTCGAGATATTAGTAGACATGCAGAATGTATGGAGCGATCGGCGGTGAGTATTCTCAACTATAATTAGTGTGTTACATTGCTAGCATTTGACATTTGGCATTATGAGTTAAATTTCATCAACTGTTCCATTTGTTTCTCTATGTAGAAAAAGGAGGCAATTAATTCTAAAACATCTTCCACCAATCAAAGGTACACTACGTCACTCCCTTCTGTTAGATTTAAGTTAGACAATCACATAAATGGCACATTTATTTTCTGGTCAATGTTTACATTTTTTAATCTGAGTATATAGCTATGCTGCAAATTAGTACATATCATTGTACACATCTTGGTTGGTATTTATATAAGGGTGATTCATTCAATGAAATCTAAGAAATTTGGGGCATGTTTTAGAAAAATTAAGGTATTTAATGCAAGACAATCTTTATGTGGAAAAAGGGGGAGATTGGTCTGTTATTGATGGTTTATTTTAGCGCATATTATATACCTTTTTTTACCCAATCTTTAGTATATTTTCAACTCATAATTAAGAGTGTCAATGACAAAACCACAAGGGTAATTTCACTATATATAGCCAGTGACCACTTCATTGTTCAGAACCTTTCTCCATAATTAAGAAACAGTATCCTTTGTGTCCTTTTTTCTATTGTCCTTACAAACATGGGTCGCCATTTTTGTTGTTTAAAGCAAAAACTAAGAAAATGTTTATGGTCCCCTGAAGAAGATGAGAAGCTTTACATAACCATGTTTGGTGTTGGGTATTGGAGTTCAGTTCCTAAACTAGCTGGTAATATTAACATACATATCAAGTTATGAAAGAAAAAATTCCTTATCTTTTTTTACTTTACAATTAATCAGAATTATTGACAGAGAAAAGAAACTCACTTTTTTATGTATTGCAGGGTTGCAAAGGTATGGAAAGAGTTGTAGATTAAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGAAAGATCTTATCATCAATCTTCATGA
Protein sequence

>MS.gene56647.t1

MIISSHKHKFSGGERTLEWELARVKVSASRNIIEVDKALLEDDYLDHRTLPLRDISRHAECMERSAQKLRKCLWSPEEDEKLYITMFGVGYWSSVPKLAGLQRYGKSCRLRWINYLRPDLKRERSYHQSS