AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56834.t1 MTR_1g094810 96.324 544 5 1 1 544 1 529 0.0 1059
MS.gene56834.t1 MTR_4g073400 55.388 529 227 3 17 544 17 537 0.0 610
MS.gene56834.t1 MTR_1g025550 53.028 545 243 4 1 543 1 534 0.0 595
MS.gene56834.t1 MTR_4g115660 30.309 518 321 14 53 541 51 557 1.82e-73 244
MS.gene56834.t1 MTR_7g075790 32.068 474 287 14 3 453 4 465 8.26e-66 222
MS.gene56834.t1 MTR_3g106660 27.290 513 326 14 60 541 60 556 4.51e-62 214
MS.gene56834.t1 MTR_8g035590 31.671 401 252 11 11 395 1 395 4.44e-57 199
MS.gene56834.t1 MTR_4g073510 44.776 134 61 3 327 459 193 314 2.17e-22 100
MS.gene56834.t1 MTR_7g080570 41.803 122 67 4 422 540 43 163 1.91e-20 89.0
MS.gene56834.t1 MTR_2g072180 23.288 292 195 10 67 335 72 357 3.98e-14 75.9
MS.gene56834.t1 MTR_8g032320 31.410 156 97 3 259 414 2 147 1.22e-13 68.9
MS.gene56834.t1 MTR_8g032300 30.573 157 97 4 259 414 2 147 4.48e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56834.t1 AT5G04220 64.771 545 180 4 1 541 1 537 0.0 702
MS.gene56834.t1 AT5G04220 66.667 483 149 4 63 541 1 475 0.0 651
MS.gene56834.t1 AT2G20990 52.920 548 246 5 1 544 1 540 0.0 607
MS.gene56834.t1 AT1G20080 51.381 543 254 4 1 542 1 534 0.0 595
MS.gene56834.t1 AT1G20080 51.381 543 254 4 1 542 1 534 0.0 595
MS.gene56834.t1 AT1G20080 51.381 543 254 4 1 542 1 534 0.0 595
MS.gene56834.t1 AT1G20080 51.381 543 254 4 1 542 1 534 0.0 595
MS.gene56834.t1 AT1G20080 51.381 543 254 4 1 542 1 534 0.0 595
MS.gene56834.t1 AT2G20990 50.699 572 246 6 1 544 1 564 0.0 593
MS.gene56834.t1 AT2G20990 49.488 586 246 6 1 544 1 578 0.0 590
MS.gene56834.t1 AT5G04220 65.109 321 100 4 225 541 3 315 5.04e-140 407
MS.gene56834.t1 AT1G05500 29.401 568 347 16 11 541 1 551 3.25e-77 254
MS.gene56834.t1 AT2G21010 45.725 269 129 5 279 544 1 255 3.52e-77 244
MS.gene56834.t1 AT3G61050 33.005 406 249 12 1 395 1 394 2.24e-58 202
MS.gene56834.t1 AT3G61050 33.005 406 249 12 1 395 1 394 2.24e-58 202
MS.gene56834.t1 AT1G05500 31.678 423 246 12 146 541 1 407 4.70e-56 194
MS.gene56834.t1 AT3G60950 27.961 304 160 10 71 367 39 290 1.64e-24 108
MS.gene56834.t1 AT3G61030 27.632 304 154 9 71 367 39 283 6.39e-23 102
MS.gene56834.t1 AT2G21040 50.649 77 37 1 425 500 15 91 1.56e-20 92.0
MS.gene56834.t1 AT1G50260 26.129 310 201 10 69 354 190 495 5.58e-15 78.6
MS.gene56834.t1 AT1G53590 24.149 323 214 10 67 365 68 383 3.94e-12 69.7
MS.gene56834.t1 AT1G70810 36.957 92 53 3 260 351 5 91 6.66e-11 61.6
MS.gene56834.t1 AT5G47710 38.542 96 54 3 258 353 3 93 6.93e-11 61.6
MS.gene56834.t1 AT5G47710 38.542 96 54 3 258 353 3 93 6.93e-11 61.6
MS.gene56834.t1 AT5G47710 38.542 96 54 3 258 353 3 93 6.93e-11 61.6
MS.gene56834.t1 AT5G47710 38.542 96 54 3 258 353 3 93 6.93e-11 61.6
MS.gene56834.t1 AT1G70800 37.624 101 58 4 251 351 5 100 7.03e-11 61.6
MS.gene56834.t1 AT1G70790 41.379 87 46 3 258 344 4 85 8.17e-11 61.6
MS.gene56834.t1 AT1G70790 41.379 87 46 3 258 344 4 85 8.17e-11 61.6
MS.gene56834.t1 AT1G70790 41.379 87 46 3 258 344 4 85 8.17e-11 61.6

Find 142 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACAGCCTCATGTGGATTT+TGG 0.161713 1.2:+73478797 MS.gene56834:intron
TGCCCTCTAAACTTCTTATT+TGG 0.168636 1.2:-73480607 None:intergenic
ATTCCTCTTGGTCTTCTTCT+TGG 0.184387 1.2:+73477117 MS.gene56834:CDS
CCAATATTTGATGAATATAT+TGG 0.236728 1.2:+73477708 MS.gene56834:CDS
CCCAATCATAGACTTGTAAT+TGG 0.238477 1.2:-73479872 None:intergenic
CCAATATATTCATCAAATAT+TGG 0.250135 1.2:-73477708 None:intergenic
GTTAGACCAATTAGTGAATT+AGG 0.267667 1.2:+73477362 MS.gene56834:CDS
ATTTGATATGTGGCCTTTCT+TGG 0.280149 1.2:+73477563 MS.gene56834:CDS
TTCTGCAGGTATGAAAGTTT+TGG 0.282874 1.2:+73478379 MS.gene56834:intron
AAAGCAAACCCGCTCCTTCT+TGG 0.286531 1.2:-73480747 None:intergenic
TGCAAGGTCAATACTATGTT+TGG 0.291324 1.2:-73478455 None:intergenic
TTTGCAGTGATCACCTTTAG+AGG 0.302647 1.2:+73480820 MS.gene56834:CDS
TAATTCATGTTGAGATAAAA+TGG 0.314770 1.2:+73481679 MS.gene56834:CDS
TCCAATTACAAGTCTATGAT+TGG 0.315176 1.2:+73479871 MS.gene56834:CDS
GGGGTTCTTTGAAAGTTTCT+TGG 0.325108 1.2:+73477071 MS.gene56834:CDS
CATTCCTTGAATTTATTAGA+TGG 0.332392 1.2:-73481653 None:intergenic
AGTGGGCCTAATTCACTAAT+TGG 0.335206 1.2:-73477368 None:intergenic
TTATCTTTGGCCTCAGATCT+TGG 0.336761 1.2:+73479184 MS.gene56834:CDS
TTCACCCAGAGAGGAATTTC+AGG 0.340892 1.2:-73477410 None:intergenic
GGAAACAAATGAAAAGGAAT+TGG 0.343840 1.2:+73478400 MS.gene56834:CDS
AAGTTGCAAACCTTTATCTT+TGG 0.347676 1.2:+73479171 MS.gene56834:CDS
TACGGCTTAAGCAGCTTTAG+AGG 0.359782 1.2:-73480529 None:intergenic
AAACTAACTCTTTCGTAATC+AGG 0.363663 1.2:-73477437 None:intergenic
AGAAGGAGCGGGTTTGCTTT+CGG 0.368737 1.2:+73480750 MS.gene56834:CDS
ACGTTGATTCATCAAGAATA+GGG 0.369250 1.2:-73479211 None:intergenic
TGGTCTTTATAGATTTGTTC+AGG 0.370982 1.2:+73478856 MS.gene56834:CDS
CAAATTCCTCCTCTTGATAG+TGG 0.371588 1.2:-73479790 None:intergenic
TATTACATGTGAATGTGGTT+AGG 0.379262 1.2:+73479676 MS.gene56834:CDS
GCGGATAAGTTTAAGACCTT+TGG 0.382540 1.2:+73478619 MS.gene56834:CDS
AGATCTGAGGCCAAAGATAA+AGG 0.387195 1.2:-73479181 None:intergenic
AGCGGGTTTGCTTTCGGTTG+TGG 0.387500 1.2:+73480756 MS.gene56834:CDS
TTTGCTTTCGGTTGTGGTAC+AGG 0.389101 1.2:+73480762 MS.gene56834:CDS
GGGTTCTTTGAAAGTTTCTT+GGG 0.389257 1.2:+73477072 MS.gene56834:CDS
GTCTATGAAGATCAAAGTTC+AGG 0.394021 1.2:+73478484 MS.gene56834:CDS
TACGTTGATTCATCAAGAAT+AGG 0.403364 1.2:-73479212 None:intergenic
ATTTACACTTGATTTGCTTA+AGG 0.404829 1.2:+73480564 MS.gene56834:CDS
TTTGCTATTGGAATTCCTCT+TGG 0.405196 1.2:+73477105 MS.gene56834:CDS
GAGGCTCCTCTAGCATAAAC+TGG 0.415645 1.2:-73481110 None:intergenic
GATCGACTTACCACAAATAG+TGG 0.416324 1.2:-73477787 None:intergenic
TATGTCAAACTGAGCCTGAC+TGG 0.419431 1.2:+73479744 MS.gene56834:CDS
ACTCCAAATAAGAAGTTTAG+AGG 0.424971 1.2:+73480604 MS.gene56834:CDS
GCATGTTTCATCAGGTTGAT+TGG 0.427787 1.2:+73477526 MS.gene56834:intron
TCATGGAACAAGTCATCAAA+TGG 0.428179 1.2:+73478423 MS.gene56834:CDS
AAAGGTTGTGGTGTCTTTGA+TGG 0.436285 1.2:+73478664 MS.gene56834:CDS
GCAAGGTCAATACTATGTTT+GGG 0.443699 1.2:-73478454 None:intergenic
TTCATACTATCTTCTCTGAA+TGG 0.445049 1.2:-73480655 None:intergenic
TTATGCCTGAAATTCCTCTC+TGG 0.446224 1.2:+73477405 MS.gene56834:CDS
ACTCTTCCTCCCACTATTTG+TGG 0.446962 1.2:+73477777 MS.gene56834:CDS
TCACTAATTGGTCTAACAAC+AGG 0.448248 1.2:-73477356 None:intergenic
TAACAAAATGCAGGAATCCC+TGG 0.449558 1.2:+73481572 MS.gene56834:intron
GTCAGGCTCAGTTTGACATA+TGG 0.457579 1.2:-73479741 None:intergenic
GTAAATTCTTTATTCTCGTA+CGG 0.461838 1.2:-73480547 None:intergenic
TTCATTCCAACGTGGTTGAC+GGG 0.462970 1.2:-73481082 None:intergenic
CTGGAAGTTTGTCCCCAGTC+AGG 0.464687 1.2:-73479758 None:intergenic
AGAGAAGATAGTATGAAATT+CGG 0.467927 1.2:+73480661 MS.gene56834:CDS
CTTCATTCCAACGTGGTTGA+CGG 0.468702 1.2:-73481083 None:intergenic
AACAAAATGCAGGAATCCCT+GGG 0.473300 1.2:+73481573 MS.gene56834:intron
CTGAGTGATGTGGTGCATAA+TGG 0.477183 1.2:+73481612 MS.gene56834:CDS
AGTACCATCTAATAAATTCA+AGG 0.478035 1.2:+73481649 MS.gene56834:CDS
ATTACATGTGAATGTGGTTA+GGG 0.483908 1.2:+73479677 MS.gene56834:CDS
CCAATTACAAGTCTATGATT+GGG 0.487047 1.2:+73479872 MS.gene56834:CDS
GGATATGTCAGAAAGGATAG+TGG 0.491916 1.2:+73480697 MS.gene56834:CDS
AATTGGAGAACTTGAGATTG+AGG 0.492351 1.2:-73479855 None:intergenic
TTGAATTTCTCATTCCATTG+AGG 0.492601 1.2:-73479816 None:intergenic
CCTTTAGAGGCGAAAAGAAA+AGG 0.501075 1.2:+73480833 MS.gene56834:CDS
TCAAGTACCTTCTCCAAGAA+AGG 0.503469 1.2:-73477576 None:intergenic
TTTGGGTTGGCGATATCTGG+AGG 0.509662 1.2:+73478815 MS.gene56834:CDS
CTAAAGGTGATCACTGCAAA+GGG 0.513629 1.2:-73480817 None:intergenic
ACCACAACCTTTGCAAAACA+TGG 0.513949 1.2:-73478653 None:intergenic
GATTAATCTCCACATGCCCC+AGG 0.514352 1.2:-73481590 None:intergenic
GAAATTCAAGATTGTTGTGA+AGG 0.518827 1.2:+73479830 MS.gene56834:CDS
GGTTGGTGCACATGACAAGC+TGG 0.526836 1.2:+73480492 MS.gene56834:intron
CATCTAATAAATTCAAGGAA+TGG 0.529092 1.2:+73481654 MS.gene56834:CDS
GAGTTTGATCAATTGAGTCT+TGG 0.529640 1.2:+73477753 MS.gene56834:CDS
GAACAAGTCATCAAATGGGC+TGG 0.529916 1.2:+73478428 MS.gene56834:CDS
ATGTCAAACTGAGCCTGACT+GGG 0.530491 1.2:+73479745 MS.gene56834:CDS
TTCTGAATCAAAGCAAGTCA+AGG 0.530603 1.2:+73477158 MS.gene56834:CDS
ATTGGAGAACTTGAGATTGA+GGG 0.531440 1.2:-73479854 None:intergenic
TATGCCTGAAATTCCTCTCT+GGG 0.532945 1.2:+73477406 MS.gene56834:CDS
TATGTGGCCTTTCTTGGAGA+AGG 0.533642 1.2:+73477569 MS.gene56834:CDS
GGAGGAATTTGAATCCTCAA+TGG 0.534114 1.2:+73479802 MS.gene56834:CDS
TTGGGTTGGCGATATCTGGA+GGG 0.536736 1.2:+73478816 MS.gene56834:CDS
TATTGGAAAGTATCAGATCA+AGG 0.540715 1.2:+73477725 MS.gene56834:CDS
AAATGAAAAGGAATTGGTCA+TGG 0.544170 1.2:+73478406 MS.gene56834:CDS
GCAGGAATCCCTGGGGCATG+TGG 0.544730 1.2:+73481581 MS.gene56834:intron
ACAGGAGGCTGACGAAGTTG+AGG 0.550573 1.2:+73480780 MS.gene56834:CDS
TTCACATGTAATATTCCCAC+TGG 0.557080 1.2:-73479666 None:intergenic
TGTTGAGATAAAATGGAAGG+TGG 0.558509 1.2:+73481686 MS.gene56834:CDS
AAACCAAGAAGAAGACCAAG+AGG 0.560579 1.2:-73477120 None:intergenic
CATGGAACAAGTCATCAAAT+GGG 0.569785 1.2:+73478424 MS.gene56834:CDS
TTTGTGTACAGGCAATTTGT+GGG 0.575356 1.2:+73477664 MS.gene56834:intron
TGTGGTGTCTTTGATGGAGA+AGG 0.577038 1.2:+73478670 MS.gene56834:CDS
ACGGCTTAAGCAGCTTTAGA+GGG 0.581907 1.2:-73480528 None:intergenic
CAGGAGGCTGACGAAGTTGA+GGG 0.583761 1.2:+73480781 MS.gene56834:CDS
GATGAGGTCCAAGAAGGAGC+GGG 0.586490 1.2:+73480739 MS.gene56834:CDS
GTTCAATGTACAGCCTCATG+TGG 0.586957 1.2:+73478790 MS.gene56834:intron
CTCCAAATAAGAAGTTTAGA+GGG 0.589712 1.2:+73480605 MS.gene56834:CDS
ATGTGTATCTTCTCATGTAG+AGG 0.590209 1.2:-73481132 None:intergenic
AGAATTCCAGTTTATGCTAG+AGG 0.594294 1.2:+73481104 MS.gene56834:CDS
TTCAGAAGGATATGTCAGAA+AGG 0.595674 1.2:+73480690 MS.gene56834:CDS
GGGGACATCATGTCAATACC+TGG 0.598945 1.2:+73478836 MS.gene56834:CDS
TCTAAAGGTGATCACTGCAA+AGG 0.603963 1.2:-73480818 None:intergenic
GTTTAGAGGGCAAATTGTGG+TGG 0.604850 1.2:+73480618 MS.gene56834:CDS
TCATGTTGAGATAAAATGGA+AGG 0.606731 1.2:+73481683 MS.gene56834:CDS
GAAGATAGTATGAAATTCGG+TGG 0.610289 1.2:+73480664 MS.gene56834:CDS
TGTATCTTCTCATGTAGAGG+AGG 0.615556 1.2:-73481129 None:intergenic
GATGGTACTTGTCGTTAATG+CGG 0.616891 1.2:-73481635 None:intergenic
GTTGGTGCACATGACAAGCT+GGG 0.617725 1.2:+73480493 MS.gene56834:CDS
GCTTTCGGTTGTGGTACAGG+AGG 0.618012 1.2:+73480765 MS.gene56834:CDS
TCTGATGATGAGGTCCAAGA+AGG 0.618375 1.2:+73480733 MS.gene56834:CDS
AAATTCGGTGGATCTTCAGA+AGG 0.618590 1.2:+73480676 MS.gene56834:CDS
ATCTTCTCTGAATGGAACAA+AGG 0.620019 1.2:-73480647 None:intergenic
ACATTGAGGTCATGAGCAAG+AGG 0.623223 1.2:+73481151 MS.gene56834:CDS
GGGAATATTACATGTGAATG+TGG 0.627036 1.2:+73479671 MS.gene56834:CDS
ATAAGTTCTTGCAAAGCAAG+TGG 0.630851 1.2:-73477386 None:intergenic
ATCGACTTACCACAAATAGT+GGG 0.631225 1.2:-73477786 None:intergenic
CGAAGAAAACCACTATCAAG+AGG 0.635234 1.2:+73479781 MS.gene56834:CDS
ACATGAGAAGATACACATTG+AGG 0.638470 1.2:+73481137 MS.gene56834:CDS
ACAAGTCTATGATTGGGACA+AGG 0.641670 1.2:+73479878 MS.gene56834:CDS
GAAGTTTAGAGGGCAAATTG+TGG 0.644875 1.2:+73480615 MS.gene56834:CDS
AGAAAACCCGTCAACCACGT+TGG 0.649974 1.2:+73481076 MS.gene56834:CDS
TCAGGTGTCTTCACCCAGAG+AGG 0.650472 1.2:-73477419 None:intergenic
ATTAATCTCCACATGCCCCA+GGG 0.650883 1.2:-73481589 None:intergenic
TAAGTTCTTGCAAAGCAAGT+GGG 0.651983 1.2:-73477385 None:intergenic
TGATGAGGTCCAAGAAGGAG+CGG 0.653990 1.2:+73480738 MS.gene56834:CDS
TGGGTTGGCGATATCTGGAG+GGG 0.654158 1.2:+73478817 MS.gene56834:CDS
CTTCATAGACAACACATGCA+AGG 0.656238 1.2:-73478471 None:intergenic
ATAGGGATTTCCAAGATCTG+AGG 0.659945 1.2:-73479194 None:intergenic
AGGCGAAAAGAAAAGGACAA+AGG 0.660070 1.2:+73480840 MS.gene56834:CDS
GGTAGCAATAAAGAAGCCAG+TGG 0.667479 1.2:+73479650 MS.gene56834:CDS
TGATAGTGTATCTGATGATG+AGG 0.667621 1.2:+73480723 MS.gene56834:CDS
AGAAAACCACTATCAAGAGG+AGG 0.672004 1.2:+73479784 MS.gene56834:CDS
GCCAACCCAAAATCCACATG+AGG 0.676621 1.2:-73478803 None:intergenic
CATGGAAGTGTAGACACCAA+AGG 0.678495 1.2:-73478635 None:intergenic
GACTTACCACAAATAGTGGG+AGG 0.682265 1.2:-73477783 None:intergenic
GTAGCAATAAAGAAGCCAGT+GGG 0.689579 1.2:+73479651 MS.gene56834:CDS
TGAACAAATCTATAAAGACC+AGG 0.696952 1.2:-73478854 None:intergenic
AAAGGTCTTAAACTTATCCG+CGG 0.705412 1.2:-73478617 None:intergenic
TGTCAAACTGAGCCTGACTG+GGG 0.720631 1.2:+73479746 MS.gene56834:CDS
GGAGATTAATCTGAGTGATG+TGG 0.736278 1.2:+73481602 MS.gene56834:CDS
TGGAATTCTTCATTCCAACG+TGG 0.738872 1.2:-73481090 None:intergenic
ACAAAATGCAGGAATCCCTG+GGG 0.759341 1.2:+73481574 MS.gene56834:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTTAATTGTGATA+GGG - chr1.2:73481464-73481483 None:intergenic 10.0%
!! AAAATCAAAATCAATATTAG+AGG - chr1.2:73478564-73478583 None:intergenic 15.0%
!! ATTAGATGATTATTGTTTAA+TGG + chr1.2:73477631-73477650 MS.gene56834:intron 15.0%
!! CAAATTAAATAATACTAACT+TGG - chr1.2:73481012-73481031 None:intergenic 15.0%
!! GTTAAATAGTAAAATAATTC+AGG - chr1.2:73479479-73479498 None:intergenic 15.0%
!! TAAATATGTGAAGAAAAATA+AGG - chr1.2:73479627-73479646 None:intergenic 15.0%
!! TATACGCAAAATAATTATTA+GGG - chr1.2:73479398-73479417 None:intergenic 15.0%
!! TTATAAAATTGGAATCTTTA+TGG + chr1.2:73480118-73480137 MS.gene56834:intron 15.0%
!! TTATACGCAAAATAATTATT+AGG - chr1.2:73479399-73479418 None:intergenic 15.0%
!!! AATTCATATATGTTCATTTT+AGG - chr1.2:73477965-73477984 None:intergenic 15.0%
!!! ATTTTTCTTCACATATTTAT+AGG + chr1.2:73479628-73479647 MS.gene56834:intron 15.0%
!!! GAATTTTTTTTAATTGTGAT+AGG - chr1.2:73481465-73481484 None:intergenic 15.0%
!!! TAGTTGGTTTTTTATTTTTA+AGG + chr1.2:73480279-73480298 MS.gene56834:intron 15.0%
!!! TCAAACTTTGTTTATAAAAT+TGG + chr1.2:73480107-73480126 MS.gene56834:intron 15.0%
!!! TTGCTTGAAAAAATTTATTT+TGG + chr1.2:73481029-73481048 MS.gene56834:intron 15.0%
!!! TTTTTCTTCACATATTTATA+GGG + chr1.2:73479629-73479648 MS.gene56834:intron 15.0%
!! AAAACTGATAAAAACAAATG+TGG - chr1.2:73477239-73477258 None:intergenic 20.0%
!! AAACAAAGTTTGAAAATAAG+TGG - chr1.2:73480100-73480119 None:intergenic 20.0%
!! AAACTGATAAAAACAAATGT+GGG - chr1.2:73477238-73477257 None:intergenic 20.0%
!! AAAGTTTCAAGAAATCTATT+AGG - chr1.2:73481249-73481268 None:intergenic 20.0%
!! AAGTATATCGATATTTGATA+AGG - chr1.2:73478258-73478277 None:intergenic 20.0%
!! AATTATTTATCAGATGAGAA+GGG - chr1.2:73478768-73478787 None:intergenic 20.0%
!! AGTATATCGATATTTGATAA+GGG - chr1.2:73478257-73478276 None:intergenic 20.0%
!! ATACGCAAAATAATTATTAG+GGG - chr1.2:73479397-73479416 None:intergenic 20.0%
!! ATAGATTTCTTGAAACTTTA+AGG + chr1.2:73481250-73481269 MS.gene56834:intron 20.0%
!! ATTCAAATATGACAATCTTA+AGG - chr1.2:73480021-73480040 None:intergenic 20.0%
!! CCAATATATTCATCAAATAT+TGG - chr1.2:73477711-73477730 None:intergenic 20.0%
!! CCAATATTTGATGAATATAT+TGG + chr1.2:73477708-73477727 MS.gene56834:CDS 20.0%
!! GTTAAATGAAATTTACAACT+AGG - chr1.2:73478927-73478946 None:intergenic 20.0%
!! TAATGAAGAGAAAAATGAAA+TGG - chr1.2:73481204-73481223 None:intergenic 20.0%
!! TAATTATTTATCAGATGAGA+AGG - chr1.2:73478769-73478788 None:intergenic 20.0%
!! TAATTCATGTTGAGATAAAA+TGG + chr1.2:73481679-73481698 MS.gene56834:CDS 20.0%
!! TAGATTTCTTGAAACTTTAA+GGG + chr1.2:73481251-73481270 MS.gene56834:intron 20.0%
!! TATGAATTGAATGAAATTAC+TGG + chr1.2:73477977-73477996 MS.gene56834:intron 20.0%
!! TTAAGATTGTCATATTTGAA+TGG + chr1.2:73480020-73480039 MS.gene56834:intron 20.0%
!! TTCAAATATGACAATCTTAA+GGG - chr1.2:73480020-73480039 None:intergenic 20.0%
!!! AACCATACAATATTTTCAAA+CGG + chr1.2:73480203-73480222 MS.gene56834:intron 20.0%
!!! ACAAGTTTTTATTTGATATG+TGG + chr1.2:73477553-73477572 MS.gene56834:CDS 20.0%
!!! ACAATTTTTGGAATCATAAT+TGG - chr1.2:73481492-73481511 None:intergenic 20.0%
!!! ATTTATTTTACGTCTAGATT+GGG - chr1.2:73478131-73478150 None:intergenic 20.0%
!!! TATGTTGACTTATCTAAATA+AGG - chr1.2:73479362-73479381 None:intergenic 20.0%
!!! TATTTTCTAATTTTCTGTGA+GGG - chr1.2:73478523-73478542 None:intergenic 20.0%
!!! TTATTTTCTAATTTTCTGTG+AGG - chr1.2:73478524-73478543 None:intergenic 20.0%
!!! TTTTACAAATAACATATGCA+AGG + chr1.2:73479325-73479344 MS.gene56834:intron 20.0%
!!! TTTTATGTAGTGACAAAAAT+TGG - chr1.2:73480928-73480947 None:intergenic 20.0%
! ACAGAGATGAAAAATAAGAT+TGG - chr1.2:73480437-73480456 None:intergenic 25.0%
! ACTGAATATTAAATGTGCAT+AGG - chr1.2:73479029-73479048 None:intergenic 25.0%
! AGAGAAGATAGTATGAAATT+CGG + chr1.2:73480661-73480680 MS.gene56834:CDS 25.0%
! AGTACCATCTAATAAATTCA+AGG + chr1.2:73481649-73481668 MS.gene56834:CDS 25.0%
! CATATCATCAATGAATCAAA+TGG - chr1.2:73480460-73480479 None:intergenic 25.0%
! CATCTAATAAATTCAAGGAA+TGG + chr1.2:73481654-73481673 MS.gene56834:CDS 25.0%
! CATTCCTTGAATTTATTAGA+TGG - chr1.2:73481656-73481675 None:intergenic 25.0%
! GCAAATTGACATTATATTTG+TGG + chr1.2:73478020-73478039 MS.gene56834:intron 25.0%
! GTAAATTCTTTATTCTCGTA+CGG - chr1.2:73480550-73480569 None:intergenic 25.0%
! TTCAATCAAATATGAATCCT+TGG + chr1.2:73478173-73478192 MS.gene56834:intron 25.0%
! TTCCGTTTGAAAATATTGTA+TGG - chr1.2:73480208-73480227 None:intergenic 25.0%
! TTTAATATTCAGTTCGTTGA+TGG + chr1.2:73479036-73479055 MS.gene56834:intron 25.0%
! TTTCTTCTAATTTCACTTCT+CGG + chr1.2:73478709-73478728 MS.gene56834:intron 25.0%
! TTTCTTCTTCAAAGTTATGT+TGG + chr1.2:73480344-73480363 MS.gene56834:intron 25.0%
!! ATATTTTCAAACGGAAACTT+TGG + chr1.2:73480212-73480231 MS.gene56834:intron 25.0%
!! TGATTATAGTTTGGCATTTT+GGG + chr1.2:73477938-73477957 MS.gene56834:intron 25.0%
!!! AGTTTTGGAAACAAATGAAA+AGG + chr1.2:73478394-73478413 MS.gene56834:CDS 25.0%
!!! ATATTTGAATGGATTATGGA+TGG + chr1.2:73480031-73480050 MS.gene56834:intron 25.0%
!!! ATTTACACTTGATTTGCTTA+AGG + chr1.2:73480564-73480583 MS.gene56834:CDS 25.0%
!!! CATTTATTTTACGTCTAGAT+TGG - chr1.2:73478132-73478151 None:intergenic 25.0%
!!! CTGGTTACTTTTTCAAATTT+TGG + chr1.2:73479917-73479936 MS.gene56834:intron 25.0%
!!! CTTCTAAAACAGTTGAATTT+TGG - chr1.2:73477841-73477860 None:intergenic 25.0%
!!! CTTTTGAAAATGGATTTGTT+AGG + chr1.2:73479708-73479727 MS.gene56834:CDS 25.0%
!!! GAATTTACCTTTTTTACTAG+AGG + chr1.2:73480252-73480271 MS.gene56834:intron 25.0%
!!! GTTTAGCTTCTAACAATTTT+TGG - chr1.2:73481504-73481523 None:intergenic 25.0%
!!! TGATTTTGATTTTTCTCAGT+TGG + chr1.2:73478571-73478590 MS.gene56834:intron 25.0%
!!! TGTCATATTTGAATGGATTA+TGG + chr1.2:73480027-73480046 MS.gene56834:intron 25.0%
!!! TTTCTTTGTTTTCTGTATGT+CGG + chr1.2:73480304-73480323 MS.gene56834:intron 25.0%
!!! TTTGATTTTTTGTTTGTTGC+AGG + chr1.2:73477331-73477350 MS.gene56834:intron 25.0%
AAACATGAGCATTAGCAATT+GGG + chr1.2:73479600-73479619 MS.gene56834:intron 30.0%
AAACTAACTCTTTCGTAATC+AGG - chr1.2:73477440-73477459 None:intergenic 30.0%
AAATGAAAAGGAATTGGTCA+TGG + chr1.2:73478406-73478425 MS.gene56834:CDS 30.0%
AACCATAAAAGTAACTTCAG+TGG - chr1.2:73479275-73479294 None:intergenic 30.0%
AAGTTGCAAACCTTTATCTT+TGG + chr1.2:73479171-73479190 MS.gene56834:CDS 30.0%
ACTCCAAATAAGAAGTTTAG+AGG + chr1.2:73480604-73480623 MS.gene56834:CDS 30.0%
AGAGATTTCATGTTAGTACA+TGG + chr1.2:73477859-73477878 MS.gene56834:intron 30.0%
AGTTGAGATAAACTACATGA+GGG - chr1.2:73481553-73481572 None:intergenic 30.0%
ATGCGATCATTATGTTCTAA+AGG - chr1.2:73478218-73478237 None:intergenic 30.0%
ATTACATGTGAATGTGGTTA+GGG + chr1.2:73479677-73479696 MS.gene56834:CDS 30.0%
ATTGTGTGTCATAAATGAGA+AGG + chr1.2:73477891-73477910 MS.gene56834:intron 30.0%
CAAGAAATCTATTAGGACTT+GGG - chr1.2:73481242-73481261 None:intergenic 30.0%
CAGAAAACACTAGAAGTAAA+CGG - chr1.2:73481278-73481297 None:intergenic 30.0%
CCAATTACAAGTCTATGATT+GGG + chr1.2:73479872-73479891 MS.gene56834:CDS 30.0%
CTAGAGTAATGAAGAACATA+TGG + chr1.2:73478043-73478062 MS.gene56834:intron 30.0%
CTCCAAATAAGAAGTTTAGA+GGG + chr1.2:73480605-73480624 MS.gene56834:CDS 30.0%
GAAATTCAAGATTGTTGTGA+AGG + chr1.2:73479830-73479849 MS.gene56834:CDS 30.0%
GGAAACAAATGAAAAGGAAT+TGG + chr1.2:73478400-73478419 MS.gene56834:CDS 30.0%
GTAAATTCACTCCTTGAAAT+TGG - chr1.2:73480240-73480259 None:intergenic 30.0%
GTTAGACCAATTAGTGAATT+AGG + chr1.2:73477362-73477381 MS.gene56834:CDS 30.0%
TAAACATGAGCATTAGCAAT+TGG + chr1.2:73479599-73479618 MS.gene56834:intron 30.0%
TACTTGATTCAGTGATCATA+TGG + chr1.2:73477592-73477611 MS.gene56834:intron 30.0%
TAGTTGAGATAAACTACATG+AGG - chr1.2:73481554-73481573 None:intergenic 30.0%
TATCTCAACTAACAAAATGC+AGG + chr1.2:73481563-73481582 MS.gene56834:intron 30.0%
TATTACATGTGAATGTGGTT+AGG + chr1.2:73479676-73479695 MS.gene56834:CDS 30.0%
TCAAGAAATCTATTAGGACT+TGG - chr1.2:73481243-73481262 None:intergenic 30.0%
TCAATTGATCACTAAGAACA+CGG + chr1.2:73478957-73478976 MS.gene56834:intron 30.0%
TCATGTTGAGATAAAATGGA+AGG + chr1.2:73481683-73481702 MS.gene56834:CDS 30.0%
TCCAATTACAAGTCTATGAT+TGG + chr1.2:73479871-73479890 MS.gene56834:CDS 30.0%
TGAACAAATCTATAAAGACC+AGG - chr1.2:73478857-73478876 None:intergenic 30.0%
TGATATTTGCATGTTTCATC+AGG + chr1.2:73477518-73477537 MS.gene56834:intron 30.0%
TTCATACTATCTTCTCTGAA+TGG - chr1.2:73480658-73480677 None:intergenic 30.0%
TTGAATTTCTCATTCCATTG+AGG - chr1.2:73479819-73479838 None:intergenic 30.0%
TTGCGTATAATATTTCTCAG+TGG + chr1.2:73479409-73479428 MS.gene56834:intron 30.0%
! AAGGTAAAATTTTCTCCCTT+CGG + chr1.2:73480859-73480878 MS.gene56834:intron 30.0%
! AGGTTTTACTTATCTTCTTC+TGG + chr1.2:73479898-73479917 MS.gene56834:intron 30.0%
! CTGATTATAGTTTGGCATTT+TGG + chr1.2:73477937-73477956 MS.gene56834:intron 30.0%
! TCTTATCGCTGATTATAGTT+TGG + chr1.2:73477929-73477948 MS.gene56834:intron 30.0%
! TGGTCTTTATAGATTTGTTC+AGG + chr1.2:73478856-73478875 MS.gene56834:CDS 30.0%
!! AAACTTTGGAACCAATTTCA+AGG + chr1.2:73480226-73480245 MS.gene56834:intron 30.0%
!! ACGTTGATTCATCAAGAATA+GGG - chr1.2:73479214-73479233 None:intergenic 30.0%
!! TACGTTGATTCATCAAGAAT+AGG - chr1.2:73479215-73479234 None:intergenic 30.0%
!! TATTGGAAAGTATCAGATCA+AGG + chr1.2:73477725-73477744 MS.gene56834:CDS 30.0%
!! TCACTAAGTCAAAGGTATTA+AGG + chr1.2:73478315-73478334 MS.gene56834:intron 30.0%
!!! GAACTTTAGTTTTCTGTCTA+AGG + chr1.2:73481176-73481195 MS.gene56834:CDS 30.0%
!!! GTGATTTTGTTTTTGTGTAC+AGG + chr1.2:73477653-73477672 MS.gene56834:intron 30.0%
!!! GTTTTTTCTGAACTGAATTG+AGG + chr1.2:73477254-73477273 MS.gene56834:intron 30.0%
AAAGGTCTTAAACTTATCCG+CGG - chr1.2:73478620-73478639 None:intergenic 35.0%
AAAGTTGACGTCAACAGAAA+TGG - chr1.2:73478887-73478906 None:intergenic 35.0%
AATGACATTCAAGTCTCAGA+TGG + chr1.2:73480175-73480194 MS.gene56834:intron 35.0%
AATTGGAGAACTTGAGATTG+AGG - chr1.2:73479858-73479877 None:intergenic 35.0%
ACATGAGAAGATACACATTG+AGG + chr1.2:73481137-73481156 MS.gene56834:CDS 35.0%
AGAATTCCAGTTTATGCTAG+AGG + chr1.2:73481104-73481123 MS.gene56834:CDS 35.0%
ATAAGTTCTTGCAAAGCAAG+TGG - chr1.2:73477389-73477408 None:intergenic 35.0%
ATACTTATGGCACATACCAA+TGG - chr1.2:73478084-73478103 None:intergenic 35.0%
ATATGCAATTAAGTGCAGGT+TGG + chr1.2:73480475-73480494 MS.gene56834:intron 35.0%
ATCTTCTCTGAATGGAACAA+AGG - chr1.2:73480650-73480669 None:intergenic 35.0%
ATGTGCCATAAGTATCTTCT+CGG + chr1.2:73478089-73478108 MS.gene56834:intron 35.0%
ATGTGTATCTTCTCATGTAG+AGG - chr1.2:73481135-73481154 None:intergenic 35.0%
ATTGGAGAACTTGAGATTGA+GGG - chr1.2:73479857-73479876 None:intergenic 35.0%
ATTTGATATGTGGCCTTTCT+TGG + chr1.2:73477563-73477582 MS.gene56834:CDS 35.0%
CAATTGATCACTAAGAACAC+GGG + chr1.2:73478958-73478977 MS.gene56834:intron 35.0%
CATGGAACAAGTCATCAAAT+GGG + chr1.2:73478424-73478443 MS.gene56834:CDS 35.0%
CCAGAATTCACAACGAAAAA+GGG - chr1.2:73477288-73477307 None:intergenic 35.0%
CCCAATCATAGACTTGTAAT+TGG - chr1.2:73479875-73479894 None:intergenic 35.0%
CTATACGTTCACTAAGTCAA+AGG + chr1.2:73478307-73478326 MS.gene56834:intron 35.0%
CTATGTGCCTCTAGTAAAAA+AGG - chr1.2:73480262-73480281 None:intergenic 35.0%
GAAGATAGTATGAAATTCGG+TGG + chr1.2:73480664-73480683 MS.gene56834:CDS 35.0%
GACTTATCTAAATAAGGAGC+AGG - chr1.2:73479356-73479375 None:intergenic 35.0%
GAGTCTACTTTAAACTTCCA+AGG - chr1.2:73478193-73478212 None:intergenic 35.0%
GAGTTTGATCAATTGAGTCT+TGG + chr1.2:73477753-73477772 MS.gene56834:CDS 35.0%
GATGATATGCAATTAAGTGC+AGG + chr1.2:73480471-73480490 MS.gene56834:intron 35.0%
GCAAGGTCAATACTATGTTT+GGG - chr1.2:73478457-73478476 None:intergenic 35.0%
GGGAATATTACATGTGAATG+TGG + chr1.2:73479671-73479690 MS.gene56834:CDS 35.0%
GTCTATGAAGATCAAAGTTC+AGG + chr1.2:73478484-73478503 MS.gene56834:CDS 35.0%
TAAGTTCTTGCAAAGCAAGT+GGG - chr1.2:73477388-73477407 None:intergenic 35.0%
TACTTATGGCACATACCAAT+GGG - chr1.2:73478083-73478102 None:intergenic 35.0%
TAGTTAGTTCATGAAGTGCA+GGG - chr1.2:73479119-73479138 None:intergenic 35.0%
TCATGGAACAAGTCATCAAA+TGG + chr1.2:73478423-73478442 MS.gene56834:CDS 35.0%
TGCAAGGTCAATACTATGTT+TGG - chr1.2:73478458-73478477 None:intergenic 35.0%
TGCCCTCTAAACTTCTTATT+TGG - chr1.2:73480610-73480629 None:intergenic 35.0%
TGTTGAGATAAAATGGAAGG+TGG + chr1.2:73481686-73481705 MS.gene56834:CDS 35.0%
TTCACATGTAATATTCCCAC+TGG - chr1.2:73479669-73479688 None:intergenic 35.0%
TTCAGAAGGATATGTCAGAA+AGG + chr1.2:73480690-73480709 MS.gene56834:CDS 35.0%
TTCTGAATCAAAGCAAGTCA+AGG + chr1.2:73477158-73477177 MS.gene56834:CDS 35.0%
TTTGTGTACAGGCAATTTGT+GGG + chr1.2:73477664-73477683 MS.gene56834:intron 35.0%
! ACTAAGAACACGGGAATTTT+AGG + chr1.2:73478967-73478986 MS.gene56834:intron 35.0%
! ATCGACTTACCACAAATAGT+GGG - chr1.2:73477789-73477808 None:intergenic 35.0%
! CTTCATTTGACCATTTTCAG+AGG - chr1.2:73480068-73480087 None:intergenic 35.0%
! CTTTGACTTAGTGAACGTAT+AGG - chr1.2:73478309-73478328 None:intergenic 35.0%
! GAAAGTTTCTTGGGTGTTTT+TGG + chr1.2:73477081-73477100 MS.gene56834:CDS 35.0%
! GGGTTCTTTGAAAGTTTCTT+GGG + chr1.2:73477072-73477091 MS.gene56834:CDS 35.0%
! TACACTTCCATGTTTTGCAA+AGG + chr1.2:73478646-73478665 MS.gene56834:CDS 35.0%
! TCACTAATTGGTCTAACAAC+AGG - chr1.2:73477359-73477378 None:intergenic 35.0%
! TGATAGTGTATCTGATGATG+AGG + chr1.2:73480723-73480742 MS.gene56834:CDS 35.0%
! TTCTGCAGGTATGAAAGTTT+TGG + chr1.2:73478379-73478398 MS.gene56834:intron 35.0%
! TTTTGTGTACAGGCAATTTG+TGG + chr1.2:73477663-73477682 MS.gene56834:intron 35.0%
!! ACACGGGAATTTTAGGAATT+TGG + chr1.2:73478974-73478993 MS.gene56834:intron 35.0%
!! ACTGTTTGTTGTAATTCTGC+AGG + chr1.2:73478365-73478384 MS.gene56834:intron 35.0%
!! CCTTTTTCGTTGTGAATTCT+GGG + chr1.2:73477286-73477305 MS.gene56834:intron 35.0%
!! CTTCATTTTGCCTCTGAAAA+TGG + chr1.2:73480055-73480074 MS.gene56834:intron 35.0%
!! TTTGCTATTGGAATTCCTCT+TGG + chr1.2:73477105-73477124 MS.gene56834:CDS 35.0%
!! TTTTACTAGAGGCACATAGT+TGG + chr1.2:73480263-73480282 MS.gene56834:intron 35.0%
!!! GGTGTTTTTGGTTTTGCTAT+TGG + chr1.2:73477093-73477112 MS.gene56834:CDS 35.0%
!!! TGCCACTGAAGTTACTTTTA+TGG + chr1.2:73479270-73479289 MS.gene56834:intron 35.0%
AAACCAAGAAGAAGACCAAG+AGG - chr1.2:73477123-73477142 None:intergenic 40.0%
AAAGGTTGTGGTGTCTTTGA+TGG + chr1.2:73478664-73478683 MS.gene56834:CDS 40.0%
AACAAAATGCAGGAATCCCT+GGG + chr1.2:73481573-73481592 MS.gene56834:intron 40.0%
ACAAGTCTATGATTGGGACA+AGG + chr1.2:73479878-73479897 MS.gene56834:CDS 40.0%
ACATTCAAGTCTCAGATGGA+CGG + chr1.2:73480179-73480198 MS.gene56834:intron 40.0%
ACCACAACCTTTGCAAAACA+TGG - chr1.2:73478656-73478675 None:intergenic 40.0%
AGAAAACCACTATCAAGAGG+AGG + chr1.2:73479784-73479803 MS.gene56834:CDS 40.0%
AGGCGAAAAGAAAAGGACAA+AGG + chr1.2:73480840-73480859 MS.gene56834:CDS 40.0%
AGTGGGCCTAATTCACTAAT+TGG - chr1.2:73477371-73477390 None:intergenic 40.0%
AGTTAGTTCATGAAGTGCAG+GGG - chr1.2:73479118-73479137 None:intergenic 40.0%
ATAGGGATTTCCAAGATCTG+AGG - chr1.2:73479197-73479216 None:intergenic 40.0%
CAAATTCCTCCTCTTGATAG+TGG - chr1.2:73479793-73479812 None:intergenic 40.0%
CCCAGAATTCACAACGAAAA+AGG - chr1.2:73477289-73477308 None:intergenic 40.0%
CGAAGAAAACCACTATCAAG+AGG + chr1.2:73479781-73479800 MS.gene56834:CDS 40.0%
CTAAAGGTGATCACTGCAAA+GGG - chr1.2:73480820-73480839 None:intergenic 40.0%
CTTCATAGACAACACATGCA+AGG - chr1.2:73478474-73478493 None:intergenic 40.0%
GAAATCTATTAGGACTTGGG+AGG - chr1.2:73481239-73481258 None:intergenic 40.0%
GAAGTTTAGAGGGCAAATTG+TGG + chr1.2:73480615-73480634 MS.gene56834:CDS 40.0%
GATGGTACTTGTCGTTAATG+CGG - chr1.2:73481638-73481657 None:intergenic 40.0%
GGAGATTAATCTGAGTGATG+TGG + chr1.2:73481602-73481621 MS.gene56834:CDS 40.0%
GGAGGAATTTGAATCCTCAA+TGG + chr1.2:73479802-73479821 MS.gene56834:CDS 40.0%
GGATATGTCAGAAAGGATAG+TGG + chr1.2:73480697-73480716 MS.gene56834:CDS 40.0%
GTAGCAATAAAGAAGCCAGT+GGG + chr1.2:73479651-73479670 MS.gene56834:CDS 40.0%
GTAGTTAGTTCATGAAGTGC+AGG - chr1.2:73479120-73479139 None:intergenic 40.0%
GTCTTTGATGGAGAAGGTAA+GGG + chr1.2:73478676-73478695 MS.gene56834:intron 40.0%
GTTCTGCAATGTAATCCCAT+TGG + chr1.2:73478065-73478084 MS.gene56834:intron 40.0%
TAACAAAATGCAGGAATCCC+TGG + chr1.2:73481572-73481591 MS.gene56834:intron 40.0%
TATGCCTGAAATTCCTCTCT+GGG + chr1.2:73477406-73477425 MS.gene56834:CDS 40.0%
TCAAGTACCTTCTCCAAGAA+AGG - chr1.2:73477579-73477598 None:intergenic 40.0%
TCTAAAGGTGATCACTGCAA+AGG - chr1.2:73480821-73480840 None:intergenic 40.0%
TGCTACCGAGAAGATACTTA+TGG - chr1.2:73478097-73478116 None:intergenic 40.0%
TGGAATTCTTCATTCCAACG+TGG - chr1.2:73481093-73481112 None:intergenic 40.0%
TGTATCTTCTCATGTAGAGG+AGG - chr1.2:73481132-73481151 None:intergenic 40.0%
TGTCTTTGATGGAGAAGGTA+AGG + chr1.2:73478675-73478694 MS.gene56834:intron 40.0%
TTATCTTTGGCCTCAGATCT+TGG + chr1.2:73479184-73479203 MS.gene56834:CDS 40.0%
TTATGCCTGAAATTCCTCTC+TGG + chr1.2:73477405-73477424 MS.gene56834:CDS 40.0%
TTTGCAGTGATCACCTTTAG+AGG + chr1.2:73480820-73480839 MS.gene56834:CDS 40.0%
! AAATTCGGTGGATCTTCAGA+AGG + chr1.2:73480676-73480695 MS.gene56834:CDS 40.0%
! AGATCTGAGGCCAAAGATAA+AGG - chr1.2:73479184-73479203 None:intergenic 40.0%
! ATTCCTCTTGGTCTTCTTCT+TGG + chr1.2:73477117-73477136 MS.gene56834:CDS 40.0%
! CCTTTAGAGGCGAAAAGAAA+AGG + chr1.2:73480833-73480852 MS.gene56834:CDS 40.0%
! CCTTTTCTTTTCGCCTCTAA+AGG - chr1.2:73480836-73480855 None:intergenic 40.0%
! GATCGACTTACCACAAATAG+TGG - chr1.2:73477790-73477809 None:intergenic 40.0%
! GCGGATAAGTTTAAGACCTT+TGG + chr1.2:73478619-73478638 MS.gene56834:CDS 40.0%
! GGGGTTCTTTGAAAGTTTCT+TGG + chr1.2:73477071-73477090 MS.gene56834:CDS 40.0%
! TACAGCCTCATGTGGATTTT+GGG + chr1.2:73478798-73478817 MS.gene56834:intron 40.0%
! TCCATGTTTTGCAAAGGTTG+TGG + chr1.2:73478652-73478671 MS.gene56834:CDS 40.0%
!! CCCTTTTTCGTTGTGAATTC+TGG + chr1.2:73477285-73477304 MS.gene56834:intron 40.0%
!! CGGGAATTTTAGGAATTTGG+TGG + chr1.2:73478977-73478996 MS.gene56834:intron 40.0%
!! GCATGTTTCATCAGGTTGAT+TGG + chr1.2:73477526-73477545 MS.gene56834:intron 40.0%
!! GGCAGTCAAGCTTTTGAAAA+TGG + chr1.2:73479698-73479717 MS.gene56834:CDS 40.0%
!!! TTGATAGTGGTTTTCTTCGC+TGG - chr1.2:73479780-73479799 None:intergenic 40.0%
ACAAAATGCAGGAATCCCTG+GGG + chr1.2:73481574-73481593 MS.gene56834:intron 45.0%
ACATTGAGGTCATGAGCAAG+AGG + chr1.2:73481151-73481170 MS.gene56834:CDS 45.0%
ACTAGGAAACTTCCATTCGC+AGG - chr1.2:73478910-73478929 None:intergenic 45.0%
ACTCTTCCTCCCACTATTTG+TGG + chr1.2:73477777-73477796 MS.gene56834:CDS 45.0%
ATGTCAAACTGAGCCTGACT+GGG + chr1.2:73479745-73479764 MS.gene56834:CDS 45.0%
ATTAATCTCCACATGCCCCA+GGG - chr1.2:73481592-73481611 None:intergenic 45.0%
CTGAGTGATGTGGTGCATAA+TGG + chr1.2:73481612-73481631 MS.gene56834:CDS 45.0%
CTTCATTCCAACGTGGTTGA+CGG - chr1.2:73481086-73481105 None:intergenic 45.0%
GAACAAGTCATCAAATGGGC+TGG + chr1.2:73478428-73478447 MS.gene56834:CDS 45.0%
GCTGACACTAGATGCTTTCA+AGG - chr1.2:73479998-73480017 None:intergenic 45.0%
GGTAGCAATAAAGAAGCCAG+TGG + chr1.2:73479650-73479669 MS.gene56834:CDS 45.0%
GTCAGGCTCAGTTTGACATA+TGG - chr1.2:73479744-73479763 None:intergenic 45.0%
GTTAGTTCATGAAGTGCAGG+GGG - chr1.2:73479117-73479136 None:intergenic 45.0%
GTTCAATGTACAGCCTCATG+TGG + chr1.2:73478790-73478809 MS.gene56834:intron 45.0%
GTTTAGAGGGCAAATTGTGG+TGG + chr1.2:73480618-73480637 MS.gene56834:CDS 45.0%
TAACTACTTCAGTTGCTCGC+AGG + chr1.2:73479133-73479152 MS.gene56834:intron 45.0%
TATGTCAAACTGAGCCTGAC+TGG + chr1.2:73479744-73479763 MS.gene56834:CDS 45.0%
TATGTGGCCTTTCTTGGAGA+AGG + chr1.2:73477569-73477588 MS.gene56834:CDS 45.0%
TGAGCCACATCTATACCGAA+GGG - chr1.2:73480877-73480896 None:intergenic 45.0%
TGTGGTGTCTTTGATGGAGA+AGG + chr1.2:73478670-73478689 MS.gene56834:CDS 45.0%
TTCACCCAGAGAGGAATTTC+AGG - chr1.2:73477413-73477432 None:intergenic 45.0%
TTCATTCCAACGTGGTTGAC+GGG - chr1.2:73481085-73481104 None:intergenic 45.0%
TTCTCCCTTCGGTATAGATG+TGG + chr1.2:73480870-73480889 MS.gene56834:intron 45.0%
TTGAGCCACATCTATACCGA+AGG - chr1.2:73480878-73480897 None:intergenic 45.0%
TTTGCTTTCGGTTGTGGTAC+AGG + chr1.2:73480762-73480781 MS.gene56834:CDS 45.0%
! AGGCAGAGTGTTTGGTCAAT+AGG - chr1.2:73479978-73479997 None:intergenic 45.0%
! CATGGAAGTGTAGACACCAA+AGG - chr1.2:73478638-73478657 None:intergenic 45.0%
! GACTTACCACAAATAGTGGG+AGG - chr1.2:73477786-73477805 None:intergenic 45.0%
! GTACAGCCTCATGTGGATTT+TGG + chr1.2:73478797-73478816 MS.gene56834:intron 45.0%
! TACAAGTTTTTGCGACACCG+CGG + chr1.2:73478600-73478619 MS.gene56834:CDS 45.0%
! TACGGCTTAAGCAGCTTTAG+AGG - chr1.2:73480532-73480551 None:intergenic 45.0%
! TCTGATGATGAGGTCCAAGA+AGG + chr1.2:73480733-73480752 MS.gene56834:CDS 45.0%
! TGCTTTCAAGGCAGAGTGTT+TGG - chr1.2:73479986-73480005 None:intergenic 45.0%
!! ACGGCTTAAGCAGCTTTAGA+GGG - chr1.2:73480531-73480550 None:intergenic 45.0%
!!! GATTTTGGGTTGGCGATATC+TGG + chr1.2:73478812-73478831 MS.gene56834:CDS 45.0%
AAAGCAAACCCGCTCCTTCT+TGG - chr1.2:73480750-73480769 None:intergenic 50.0%
AGAAAACCCGTCAACCACGT+TGG + chr1.2:73481076-73481095 MS.gene56834:CDS 50.0%
GACGTCAACTTTCCTGCGAA+TGG + chr1.2:73478895-73478914 MS.gene56834:intron 50.0%
GAGGCTCCTCTAGCATAAAC+TGG - chr1.2:73481113-73481132 None:intergenic 50.0%
GATTAATCTCCACATGCCCC+AGG - chr1.2:73481593-73481612 None:intergenic 50.0%
GCCAACCCAAAATCCACATG+AGG - chr1.2:73478806-73478825 None:intergenic 50.0%
GGGGACATCATGTCAATACC+TGG + chr1.2:73478836-73478855 MS.gene56834:CDS 50.0%
GTTGGTGCACATGACAAGCT+GGG + chr1.2:73480493-73480512 MS.gene56834:CDS 50.0%
TGATGAGGTCCAAGAAGGAG+CGG + chr1.2:73480738-73480757 MS.gene56834:CDS 50.0%
TGTCAAACTGAGCCTGACTG+GGG + chr1.2:73479746-73479765 MS.gene56834:CDS 50.0%
! AGAAGGAGCGGGTTTGCTTT+CGG + chr1.2:73480750-73480769 MS.gene56834:CDS 50.0%
!! GCCTCATGTGGATTTTGGGT+TGG + chr1.2:73478802-73478821 MS.gene56834:intron 50.0%
!! TTGGGTTGGCGATATCTGGA+GGG + chr1.2:73478816-73478835 MS.gene56834:CDS 50.0%
!! TTTGGGTTGGCGATATCTGG+AGG + chr1.2:73478815-73478834 MS.gene56834:CDS 50.0%
ACAGGAGGCTGACGAAGTTG+AGG + chr1.2:73480780-73480799 MS.gene56834:CDS 55.0%
CAGGAGGCTGACGAAGTTGA+GGG + chr1.2:73480781-73480800 MS.gene56834:CDS 55.0%
CTGGAAGTTTGTCCCCAGTC+AGG - chr1.2:73479761-73479780 None:intergenic 55.0%
GATGAGGTCCAAGAAGGAGC+GGG + chr1.2:73480739-73480758 MS.gene56834:CDS 55.0%
GCTTTCGGTTGTGGTACAGG+AGG + chr1.2:73480765-73480784 MS.gene56834:CDS 55.0%
TCAGGTGTCTTCACCCAGAG+AGG - chr1.2:73477422-73477441 None:intergenic 55.0%
! AGCGGGTTTGCTTTCGGTTG+TGG + chr1.2:73480756-73480775 MS.gene56834:CDS 55.0%
! GGTTGGTGCACATGACAAGC+TGG + chr1.2:73480492-73480511 MS.gene56834:intron 55.0%
!! TGGGTTGGCGATATCTGGAG+GGG + chr1.2:73478817-73478836 MS.gene56834:CDS 55.0%
GCAGGAATCCCTGGGGCATG+TGG + chr1.2:73481581-73481600 MS.gene56834:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 73477069 73481713 73477069 ID=MS.gene56834
chr1.2 mRNA 73477069 73481713 73477069 ID=MS.gene56834.t1;Parent=MS.gene56834
chr1.2 exon 73477069 73477179 73477069 ID=MS.gene56834.t1.exon1;Parent=MS.gene56834.t1
chr1.2 CDS 73477069 73477179 73477069 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73477353 73477451 73477353 ID=MS.gene56834.t1.exon2;Parent=MS.gene56834.t1
chr1.2 CDS 73477353 73477451 73477353 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73477540 73477590 73477540 ID=MS.gene56834.t1.exon3;Parent=MS.gene56834.t1
chr1.2 CDS 73477540 73477590 73477540 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73477675 73477798 73477675 ID=MS.gene56834.t1.exon4;Parent=MS.gene56834.t1
chr1.2 CDS 73477675 73477798 73477675 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73478387 73478505 73478387 ID=MS.gene56834.t1.exon5;Parent=MS.gene56834.t1
chr1.2 CDS 73478387 73478505 73478387 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73478590 73478691 73478590 ID=MS.gene56834.t1.exon6;Parent=MS.gene56834.t1
chr1.2 CDS 73478590 73478691 73478590 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73478803 73478877 73478803 ID=MS.gene56834.t1.exon7;Parent=MS.gene56834.t1
chr1.2 CDS 73478803 73478877 73478803 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73479155 73479231 73479155 ID=MS.gene56834.t1.exon8;Parent=MS.gene56834.t1
chr1.2 CDS 73479155 73479231 73479155 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73479650 73479899 73479650 ID=MS.gene56834.t1.exon9;Parent=MS.gene56834.t1
chr1.2 CDS 73479650 73479899 73479650 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73480493 73480861 73480493 ID=MS.gene56834.t1.exon10;Parent=MS.gene56834.t1
chr1.2 CDS 73480493 73480861 73480493 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73481069 73481197 73481069 ID=MS.gene56834.t1.exon11;Parent=MS.gene56834.t1
chr1.2 CDS 73481069 73481197 73481069 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
chr1.2 exon 73481585 73481713 73481585 ID=MS.gene56834.t1.exon12;Parent=MS.gene56834.t1
chr1.2 CDS 73481585 73481713 73481585 ID=cds.MS.gene56834.t1;Parent=MS.gene56834.t1
Gene Sequence

>MS.gene56834

ATGGGGTTCTTTGAAAGTTTCTTGGGTGTTTTTGGTTTTGCTATTGGAATTCCTCTTGGTCTTCTTCTTGGTTTCTTTCTCTTTGTTTTTTCTGAATCAAAGCAAGTCAAGGTTAGTGTTTTTTTTTTAATCTTTTTGCATGATCATTTTTTTCATTTCAATTTAACCCACATTTGTTTTTATCAGTTTTTTCTGAACTGAATTGAGGTTTAGATACCCTTTTTCGTTGTGAATTCTGGGTATGCTTCAAAATTTTATTTTTTTTGATTTTTTGTTTGTTGCAGGATCCTGTTGTTAGACCAATTAGTGAATTAGGCCCACTTGCTTTGCAAGAACTTATGCCTGAAATTCCTCTCTGGGTGAAGACACCTGATTACGAAAGAGTTAGTTTTATCAATATTTTGTTTATAAATTCTGAACTTTAAATTTTGATGATTTTACTGTGTTATTGATATTTGCATGTTTCATCAGGTTGATTGGTTGAACAAGTTTTTATTTGATATGTGGCCTTTCTTGGAGAAGGTACTTGATTCAGTGATCATATGGAGAATTTTGTGTTTTTATTAGATGATTATTGTTTAATGGTGATTTTGTTTTTGTGTACAGGCAATTTGTGGGATAATTAGAACTACAGCACAACCAATATTTGATGAATATATTGGAAAGTATCAGATCAAGGCAATTGAGTTTGATCAATTGAGTCTTGGTACTCTTCCTCCCACTATTTGTGGTAAGTCGATCTTTTTGTGTCTGTGTTTTGTTGTATAATCCAAAATTCAACTGTTTTAGAAGAGATTTCATGTTAGTACATGGTTAGATGTCATTGTGTGTCATAAATGAGAAGGTTGTGTCATAAGAGTTCTTATCGCTGATTATAGTTTGGCATTTTGGGTCCTAAAATGAACATATATGAATTGAATGAAATTACTGGATGAAAATACTAATTGAAATGCAAATTGACATTATATTTGTGGCTAGAGTAATGAAGAACATATGGTTCTGCAATGTAATCCCATTGGTATGTGCCATAAGTATCTTCTCGGTAGCACGTTCAAATCACCCAATCTAGACGTAAAATAAATGTAAAATGATAGATCATACATGTTCAATCAAATATGAATCCTTGGAAGTTTAAAGTAGACTCGTCCTTTAGAACATAATGATCGCATAAGTTTTTCTTATCTACCCTTATCAAATATCGATATACTTTATAAAGTTCAGTTAACACTTTCTGCAACCTATACGTTCACTAAGTCAAAGGTATTAAGGTCTTGTCTTATATTTAATTTGTTTTTCACTGTTTGTTGTAATTCTGCAGGTATGAAAGTTTTGGAAACAAATGAAAAGGAATTGGTCATGGAACAAGTCATCAAATGGGCTGGCAACCCAAACATAGTATTGACCTTGCATGTGTTGTCTATGAAGATCAAAGTTCAGGTCTGTTAAGTCTACCCTCACAGAAAATTAGAAAATAATAATTGTTTTTTAAGTTCCTCTAATATTGATTTTGATTTTTCTCAGTTGGTAGACTTACAAGTTTTTGCGACACCGCGGATAAGTTTAAGACCTTTGGTGTCTACACTTCCATGTTTTGCAAAGGTTGTGGTGTCTTTGATGGAGAAGGTAAGGGAAATAATCTATTTCTTCTAATTTCACTTCTCGGCTTTTATATTATTAGATTAGAAGTCAGAAAAATCCCTTCTCATCTGATAAATAATTATGTTCAATGTACAGCCTCATGTGGATTTTGGGTTGGCGATATCTGGAGGGGACATCATGTCAATACCTGGTCTTTATAGATTTGTTCAGGTACAGCCATTTCTGTTGACGTCAACTTTCCTGCGAATGGAAGTTTCCTAGTTGTAAATTTCATTTAACATCATTAAATTCAATTGATCACTAAGAACACGGGAATTTTAGGAATTTGGTGGTTTTAGTTTGTGAAAAATTTATCATTCCTATGCACATTTAATATTCAGTTCGTTGATGGATTTGTTGATTGTTTACATGTTATCTTTGTTGTTACTTTCTCGCTGTCACATTTTCCCCCTGCACTTCATGAACTAACTACTTCAGTTGCTCGCAGGAAACAATAAAAAAACAAGTTGCAAACCTTTATCTTTGGCCTCAGATCTTGGAAATCCCTATTCTTGATGAATCAACGTAAGTCTTGTAAAATATTAAAATGATAGAGTTCTATATGCCACTGAAGTTACTTTTATGGTTTATAAGCTTTGTAAATTTTTATCTTGCATTTTTTACAAATAACATATGCAAGGACATACCTGCTCCTTATTTAGATAAGTCAACATAGTTAAGTGTGAGCCCCTAATAATTATTTTGCGTATAATATTTCTCAGTGGCTAACAATTGCTGAAATTACACAAAACTGATATCAGATGTCTTTCCTGAATTATTTTACTATTTAACATATCATATGATCTAAAATAATGCATTTGATATTAAAATATACTGCAAATTAGTATCGTCAAAGTTTAAGTTTCACAATAACTTTATATTTGCTCTGTGTTAAACATGAGCATTAGCAATTGGGTCCTTATTTTTCTTCACATATTTATAGGGTAGCAATAAAGAAGCCAGTGGGAATATTACATGTGAATGTGGTTAGGGCAGTCAAGCTTTTGAAAATGGATTTGTTAGGAACTTCTGATCCATATGTCAAACTGAGCCTGACTGGGGACAAACTTCCAGCGAAGAAAACCACTATCAAGAGGAGGAATTTGAATCCTCAATGGAATGAGAAATTCAAGATTGTTGTGAAGGACCCTCAATCTCAAGTTCTCCAATTACAAGTCTATGATTGGGACAAGGTTTTACTTATCTTCTTCTGGTTACTTTTTCAAATTTTGGTATTAAGCACTTGTCATGAATAGTAGTAGTAGTCACCTATTGACCAAACACTCTGCCTTGAAAGCATCTAGTGTCAGCCCTTAAGATTGTCATATTTGAATGGATTATGGATGGTCTTCATTTTGCCTCTGAAAATGGTCAAATGAAGCTTAATAGACCACTTATTTTCAAACTTTGTTTATAAAATTGGAATCTTTATGGTTAAGTTATTTGTGTAAGACAAATAAAACTGATTAATGACATTCAAGTCTCAGATGGACGGCAACCATACAATATTTTCAAACGGAAACTTTGGAACCAATTTCAAGGAGTGAATTTACCTTTTTTACTAGAGGCACATAGTTGGTTTTTTATTTTTAAGGAATTTCTTTGTTTTCTGTATGTCGGCAGCTGCATGTTTAATTTTTCTTCTTCAAAGTTATGTTGGCATTTACGAGACAATTTATTTGTAAATTTTAGATTAGTTATTAGTATGATACAGACACAATCTTTCTCCAATCTTATTTTTCATCTCTGTCCATTTGATTCATTGATGATATGCAATTAAGTGCAGGTTGGTGCACATGACAAGCTGGGAATGCAGTTAGTCCCTCTAAAGCTGCTTAAGCCGTACGAGAATAAAGAATTTACACTTGATTTGCTTAAGGACACAAATGTCAATGAGACTCCAAATAAGAAGTTTAGAGGGCAAATTGTGGTGGACATGACCTTTGTTCCATTCAGAGAAGATAGTATGAAATTCGGTGGATCTTCAGAAGGATATGTCAGAAAGGATAGTGGAATTGATAGTGTATCTGATGATGAGGTCCAAGAAGGAGCGGGTTTGCTTTCGGTTGTGGTACAGGAGGCTGACGAAGTTGAGGGTCATCACAATAATCCCTTTGCAGTGATCACCTTTAGAGGCGAAAAGAAAAGGACAAAGGTAAAATTTTCTCCCTTCGGTATAGATGTGGCTCAAAACAATACAGAATCTGTTCATTCAAAACCAATTTTTGTCACTACATAAAATTTATATTGTTAAAAAAAATGCGAGCAATCATACTATCATTTGTATGCATGACTAACTCAGCCAAGTTAGTATTATTTAATTTGCTTGAAAAAATTTATTTTGGAATTTATTTTTTTGCAGATGATGAAGAAAACCCGTCAACCACGTTGGAATGAAGAATTCCAGTTTATGCTAGAGGAGCCTCCTCTACATGAGAAGATACACATTGAGGTCATGAGCAAGAGGAAGAACTTTAGTTTTCTGTCTAAGGTGCCATTTCATTTTTCTCTTCATTACAACTTATATTTCCTCCCAAGTCCTAATAGATTTCTTGAAACTTTAAGGGTCCGTTTACTTCTAGTGTTTTCTGTTTTCATTCTCACTGATAAATAAACATCAAAGAAGACATTATGAATGTTGTTGAAAATGCATTTCAAAATAGATTGATTATTTTTAAAAATTATGAAAAGTTTCAAAACATTGTTTTTCAGTGTTTCTGAAAATGCATTCTATTTAGTTAGCTTTCATATTCTCCCTATCACAATTAAAAAAAATTCATAACCAATTATGATTCCAAAAATTGTTAGAAGCTAAACAGATTGTTATTGTTAGCTCTCTCTATCCCTCATGTAGTTTATCTCAACTAACAAAATGCAGGAATCCCTGGGGCATGTGGAGATTAATCTGAGTGATGTGGTGCATAATGGCCGCATTAACGACAAGTACCATCTAATAAATTCAAGGAATGGAGTAATTCATGTTGAGATAAAATGGAAGGTGGTTTAA
Protein sequence

>MS.gene56834.t1

MGFFESFLGVFGFAIGIPLGLLLGFFLFVFSESKQVKDPVVRPISELGPLALQELMPEIPLWVKTPDYERVDWLNKFLFDMWPFLEKAICGIIRTTAQPIFDEYIGKYQIKAIEFDQLSLGTLPPTICGMKVLETNEKELVMEQVIKWAGNPNIVLTLHVLSMKIKVQLVDLQVFATPRISLRPLVSTLPCFAKVVVSLMEKPHVDFGLAISGGDIMSIPGLYRFVQETIKKQVANLYLWPQILEIPILDESTVAIKKPVGILHVNVVRAVKLLKMDLLGTSDPYVKLSLTGDKLPAKKTTIKRRNLNPQWNEKFKIVVKDPQSQVLQLQVYDWDKVGAHDKLGMQLVPLKLLKPYENKEFTLDLLKDTNVNETPNKKFRGQIVVDMTFVPFREDSMKFGGSSEGYVRKDSGIDSVSDDEVQEGAGLLSVVVQEADEVEGHHNNPFAVITFRGEKKRTKMMKKTRQPRWNEEFQFMLEEPPLHEKIHIEVMSKRKNFSFLSKESLGHVEINLSDVVHNGRINDKYHLINSRNGVIHVEIKWKVV