Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56880.t1 | XP_003608965.1 | 94.2 | 626 | 36 | 0 | 1 | 626 | 1 | 626 | 0.00E+00 | 1153.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56880.t1 | F4HSX9 | 57.2 | 586 | 243 | 3 | 42 | 626 | 20 | 598 | 1.5e-182 | 641.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56880.t1 | G7JNV9 | 94.2 | 626 | 36 | 0 | 1 | 626 | 1 | 626 | 0.0e+00 | 1153.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02122 | MS.gene56880 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56880.t1 | MTR_4g106900 | 96.166 | 626 | 24 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1255 |
| MS.gene56880.t1 | MTR_3g077950 | 60.948 | 717 | 184 | 9 | 1 | 626 | 29 | 740 | 0.0 | 814 |
| MS.gene56880.t1 | MTR_3g077950 | 60.948 | 717 | 184 | 9 | 1 | 626 | 1 | 712 | 0.0 | 813 |
| MS.gene56880.t1 | MTR_6g007110 | 55.778 | 649 | 254 | 7 | 1 | 624 | 1 | 641 | 0.0 | 681 |
| MS.gene56880.t1 | MTR_6g007110 | 55.591 | 635 | 253 | 7 | 1 | 612 | 1 | 629 | 0.0 | 660 |
| MS.gene56880.t1 | MTR_8g099745 | 62.987 | 462 | 170 | 1 | 167 | 627 | 65 | 526 | 0.0 | 625 |
| MS.gene56880.t1 | MTR_8g099745 | 23.145 | 337 | 239 | 8 | 189 | 510 | 203 | 534 | 4.85e-11 | 66.2 |
| MS.gene56880.t1 | MTR_8g027385 | 61.087 | 460 | 177 | 1 | 167 | 626 | 52 | 509 | 0.0 | 600 |
| MS.gene56880.t1 | MTR_1g070145 | 26.078 | 464 | 331 | 5 | 167 | 625 | 91 | 547 | 1.21e-41 | 160 |
| MS.gene56880.t1 | MTR_2g023050 | 70.455 | 44 | 13 | 0 | 581 | 624 | 3 | 46 | 7.49e-17 | 78.2 |
| MS.gene56880.t1 | MTR_6g006830 | 57.143 | 49 | 21 | 0 | 404 | 452 | 19 | 67 | 8.15e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56880.t1 | AT1G27500 | 57.047 | 596 | 228 | 6 | 42 | 626 | 31 | 609 | 0.0 | 678 |
| MS.gene56880.t1 | AT1G27500 | 57.581 | 587 | 239 | 5 | 42 | 626 | 20 | 598 | 0.0 | 678 |
| MS.gene56880.t1 | AT3G27960 | 54.934 | 608 | 241 | 10 | 30 | 624 | 19 | 606 | 0.0 | 645 |
| MS.gene56880.t1 | AT3G27960 | 54.934 | 608 | 241 | 10 | 30 | 624 | 19 | 606 | 0.0 | 645 |
| MS.gene56880.t1 | AT3G27960 | 54.698 | 596 | 237 | 10 | 30 | 612 | 19 | 594 | 0.0 | 627 |
| MS.gene56880.t1 | AT4G10840 | 55.166 | 542 | 218 | 5 | 104 | 627 | 12 | 546 | 0.0 | 607 |
| MS.gene56880.t1 | AT4G10840 | 24.042 | 287 | 208 | 8 | 228 | 510 | 274 | 554 | 1.59e-12 | 70.9 |
| MS.gene56880.t1 | AT4G10840 | 55.787 | 527 | 208 | 5 | 104 | 612 | 12 | 531 | 0.0 | 593 |
| MS.gene56880.t1 | AT2G31240 | 26.596 | 470 | 333 | 5 | 161 | 624 | 103 | 566 | 8.06e-41 | 158 |
Find 127 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATGTTTATTTGTAAAAT+TGG | 0.133800 | 8.1:+17667737 | None:intergenic |
| CTATATACCCCAAGAGTTTC+AGG | 0.177813 | 8.1:+17670695 | None:intergenic |
| CCCTTAGCTCTTGATATTGA+TGG | 0.198930 | 8.1:+17672150 | None:intergenic |
| TCATTTGTTCTCCACTAATA+TGG | 0.215795 | 8.1:+17672238 | None:intergenic |
| TCGATCGATCGCTCTAAAAT+TGG | 0.218648 | 8.1:+17671754 | None:intergenic |
| CTTGATATTCATAGAGAAAA+TGG | 0.235706 | 8.1:-17671481 | MS.gene56880:CDS |
| CAGATGCCACTTCCACTTCT+TGG | 0.246122 | 8.1:+17671332 | None:intergenic |
| CTTCCAATAGAAGCATTCTT+AGG | 0.278099 | 8.1:+17672033 | None:intergenic |
| TGAAGAAGCAAAGATTGTTT+TGG | 0.282341 | 8.1:-17670741 | MS.gene56880:CDS |
| GGAAGTACAAAGAAAGGTTT+TGG | 0.283596 | 8.1:-17671605 | MS.gene56880:CDS |
| GGACGATGCAATTGATATTA+TGG | 0.285210 | 8.1:-17670274 | MS.gene56880:CDS |
| TGCAGCAATATATTGCAGTT+TGG | 0.316706 | 8.1:-17671797 | MS.gene56880:CDS |
| ATTTCGCAATTGCGTGTTGC+TGG | 0.332844 | 8.1:+17671710 | None:intergenic |
| AAGTCGAGTCGACGATTCTA+AGG | 0.334895 | 8.1:-17671998 | MS.gene56880:CDS |
| TGCGAATGGGAAACCGAGTT+TGG | 0.347415 | 8.1:-17671845 | MS.gene56880:CDS |
| GCAAGGGATTTGATTTCATT+AGG | 0.353869 | 8.1:-17671928 | MS.gene56880:CDS |
| TGTGGGCTCAACGGTATTCT+TGG | 0.357522 | 8.1:+17672384 | None:intergenic |
| AAACCTAAGAATGCTTCTAT+TGG | 0.361701 | 8.1:-17672036 | MS.gene56880:CDS |
| GCAGCAATATATTGCAGTTT+GGG | 0.364615 | 8.1:-17671796 | MS.gene56880:CDS |
| TCAGAATTTAGCCATATTAG+TGG | 0.370582 | 8.1:-17672249 | MS.gene56880:CDS |
| GCAATTGTGTTCTGTTGGCC+AGG | 0.374516 | 8.1:+17670959 | None:intergenic |
| TTCGTTGACGCTGAAAATTT+TGG | 0.377813 | 8.1:+17667766 | None:intergenic |
| TTTCCATTCTTCCTTTCAAC+AGG | 0.377860 | 8.1:+17672105 | None:intergenic |
| TGCAGGAATTGAAGCTCAAA+TGG | 0.381007 | 8.1:-17670939 | MS.gene56880:CDS |
| TGGATCGGTCTTTGTACGTT+TGG | 0.386436 | 8.1:-17671191 | MS.gene56880:CDS |
| TTTATTATAGATGTTCTTAG+AGG | 0.394595 | 8.1:+17672416 | None:intergenic |
| CTTATCACCCTGAAACTCTT+GGG | 0.395524 | 8.1:-17670703 | MS.gene56880:CDS |
| CAATTATGTGTTACAACAAT+GGG | 0.403844 | 8.1:-17671630 | MS.gene56880:CDS |
| GGAGATAGTGAAAGAGGAAA+TGG | 0.406354 | 8.1:-17672208 | MS.gene56880:CDS |
| CAAGAGTTGGTGAAACTTGT+AGG | 0.412109 | 8.1:-17671570 | MS.gene56880:CDS |
| CCTTATCACCCTGAAACTCT+TGG | 0.414921 | 8.1:-17670704 | MS.gene56880:CDS |
| CATCGTATCGAGCCAATGAT+AGG | 0.415605 | 8.1:+17671284 | None:intergenic |
| TGGAGACACATTCCTATCAT+TGG | 0.416505 | 8.1:-17671296 | MS.gene56880:CDS |
| CCAGGTATTGTTCCAATTGA+AGG | 0.416547 | 8.1:-17672471 | MS.gene56880:CDS |
| CCTTCAATTGGAACAATACC+TGG | 0.419676 | 8.1:+17672471 | None:intergenic |
| GGCCAACAGAACACAATTGC+AGG | 0.427612 | 8.1:-17670956 | MS.gene56880:CDS |
| GGTCTTATATGTGAAACTAA+TGG | 0.429270 | 8.1:-17671415 | MS.gene56880:CDS |
| TGCTGGCCTTCCTCAACAAC+AGG | 0.431904 | 8.1:+17671727 | None:intergenic |
| TTGAAGAGGCGGCGGATAGA+AGG | 0.431980 | 8.1:-17671444 | MS.gene56880:CDS |
| CTACAAGTTTCACCAACTCT+TGG | 0.433233 | 8.1:+17671571 | None:intergenic |
| ATAATAGAACATGGAAGGTA+AGG | 0.438944 | 8.1:-17671159 | MS.gene56880:CDS |
| CCTCCTGTTGAAAGGAAGAA+TGG | 0.443940 | 8.1:-17672108 | MS.gene56880:CDS |
| GCTTTGGATCTGATAGTGAT+TGG | 0.453900 | 8.1:-17672284 | MS.gene56880:CDS |
| TGGGAAACCGAGTTTGGATC+TGG | 0.455266 | 8.1:-17671839 | MS.gene56880:CDS |
| GCAGGAATTGAAGCTCAAAT+GGG | 0.456824 | 8.1:-17670938 | MS.gene56880:CDS |
| GGGGTATATAGCAATCTTGC+TGG | 0.456842 | 8.1:-17670683 | MS.gene56880:CDS |
| GTCTCAAAGCTTCGAGCTAC+GGG | 0.458234 | 8.1:-17670857 | MS.gene56880:CDS |
| TTCTGAAGGAACACCAGGCA+TGG | 0.463225 | 8.1:+17671090 | None:intergenic |
| GCATCTGTTGATTGCAGCAT+TGG | 0.466377 | 8.1:-17671316 | MS.gene56880:CDS |
| ACACGCTCAAGTCAAAGCTT+TGG | 0.469749 | 8.1:-17672300 | MS.gene56880:CDS |
| CCAAGAGTTTCAGGGTGATA+AGG | 0.470788 | 8.1:+17670704 | None:intergenic |
| GAAGATGGAGATAGTGAAAG+AGG | 0.472563 | 8.1:-17672214 | MS.gene56880:CDS |
| TGGAGAACAAATGAGGAAGA+TGG | 0.477057 | 8.1:-17672229 | MS.gene56880:CDS |
| CCATTCTTCCTTTCAACAGG+AGG | 0.477650 | 8.1:+17672108 | None:intergenic |
| ATCTATGAAAATCCCATGCC+TGG | 0.478630 | 8.1:-17671103 | MS.gene56880:CDS |
| ATCTCTTCTGAAGGAACACC+AGG | 0.478756 | 8.1:+17671085 | None:intergenic |
| AAGCATTGTAAGATTCAGTC+TGG | 0.479901 | 8.1:+17670891 | None:intergenic |
| ATGTTTATTTGTAAAATTGG+AGG | 0.480673 | 8.1:+17667740 | None:intergenic |
| GGCGGCGGATAGAAGGTTGA+TGG | 0.481673 | 8.1:-17671437 | MS.gene56880:CDS |
| ACATTTGATAATCCTGAGCT+TGG | 0.484852 | 8.1:-17671970 | MS.gene56880:CDS |
| TCAATTATGTGTTACAACAA+TGG | 0.491666 | 8.1:-17671631 | MS.gene56880:CDS |
| TTCGCCAGTCACATGCAACT+TGG | 0.495995 | 8.1:-17671688 | MS.gene56880:CDS |
| ACCATCAATATCAAGAGCTA+AGG | 0.498141 | 8.1:-17672151 | MS.gene56880:CDS |
| GGGGTCATATACTATGTGTT+GGG | 0.499466 | 8.1:-17670917 | MS.gene56880:CDS |
| TGGGTTGGAAGTACAAAGAA+AGG | 0.500542 | 8.1:-17671611 | MS.gene56880:CDS |
| CAATTGTGTTCTGTTGGCCA+GGG | 0.500673 | 8.1:+17670960 | None:intergenic |
| GTCTCCAAGTTGCATGTGAC+TGG | 0.503224 | 8.1:+17671684 | None:intergenic |
| TTCCTGCAATTGTGTTCTGT+TGG | 0.509608 | 8.1:+17670954 | None:intergenic |
| CAGTTTGGGTCATTATAATG+AGG | 0.510429 | 8.1:-17671782 | MS.gene56880:CDS |
| TGTTTGAGAATTCTGCGAAT+GGG | 0.510949 | 8.1:-17671858 | MS.gene56880:CDS |
| TCGATACGATGAGGCCATCT+TGG | 0.518690 | 8.1:-17671272 | MS.gene56880:CDS |
| AGCATGGCAATGGTATCAAA+TGG | 0.519611 | 8.1:-17671355 | MS.gene56880:CDS |
| GCTGGCACATATGATGCAAT+TGG | 0.526112 | 8.1:-17670665 | MS.gene56880:CDS |
| TATATACCCCAAGAGTTTCA+GGG | 0.526906 | 8.1:+17670696 | None:intergenic |
| CTCTTCTCTTGAAGAGGCGG+CGG | 0.527025 | 8.1:-17671452 | MS.gene56880:CDS |
| TTCACCCTCTTCTCTTGAAG+AGG | 0.529038 | 8.1:-17671458 | MS.gene56880:CDS |
| TGTCTCAAAGCTTCGAGCTA+CGG | 0.531527 | 8.1:-17670858 | MS.gene56880:CDS |
| GATCGAAATTCCTGTTGTTG+AGG | 0.532523 | 8.1:-17671737 | MS.gene56880:CDS |
| CAAAGGAGGGAATCATCCTT+CGG | 0.536771 | 8.1:-17671215 | MS.gene56880:CDS |
| AGATGTTCTTAGAGGGTGAA+GGG | 0.538961 | 8.1:+17672424 | None:intergenic |
| CTTCAAAACCTCCTGTTGAA+AGG | 0.539003 | 8.1:-17672116 | MS.gene56880:CDS |
| TCTGAAGGAACACCAGGCAT+GGG | 0.540367 | 8.1:+17671091 | None:intergenic |
| TAATAGAACATGGAAGGTAA+GGG | 0.546637 | 8.1:-17671158 | MS.gene56880:CDS |
| ATGCTTCTATTGGAAGATCA+AGG | 0.547710 | 8.1:-17672026 | MS.gene56880:CDS |
| TAGATGTTCTTAGAGGGTGA+AGG | 0.549713 | 8.1:+17672423 | None:intergenic |
| GAATCATCCTTCGGTTGGAT+CGG | 0.550035 | 8.1:-17671206 | MS.gene56880:CDS |
| TTGTTTGAGAATTCTGCGAA+TGG | 0.551902 | 8.1:-17671859 | MS.gene56880:CDS |
| GGAGTAACTGATCCAAGAGT+TGG | 0.552445 | 8.1:-17671583 | MS.gene56880:CDS |
| AAATGGCCAAGAAGTGGAAG+TGG | 0.552815 | 8.1:-17671338 | MS.gene56880:CDS |
| CGCCGCCTCTTCAAGAGAAG+AGG | 0.552931 | 8.1:+17671453 | None:intergenic |
| GGAGGGAATCATCCTTCGGT+TGG | 0.553087 | 8.1:-17671211 | MS.gene56880:CDS |
| GGAGACACTTATGCTATGCT+AGG | 0.554877 | 8.1:-17671667 | MS.gene56880:CDS |
| CCATCAATATCAAGAGCTAA+GGG | 0.557668 | 8.1:-17672150 | MS.gene56880:CDS |
| CCTAGGAAATCAAAGATGCC+AGG | 0.558189 | 8.1:-17672489 | None:intergenic |
| GCACATATGATGCAATTGGC+AGG | 0.565574 | 8.1:-17670661 | MS.gene56880:intron |
| ACATAATTGAATTCTCAAGT+TGG | 0.568682 | 8.1:+17671644 | None:intergenic |
| GAAATTCCTGTTGTTGAGGA+AGG | 0.573452 | 8.1:-17671733 | MS.gene56880:CDS |
| CTGAGTTGTATAATAGAACA+TGG | 0.575405 | 8.1:-17671168 | MS.gene56880:CDS |
| TTAGGTGTTTGTGGGCTCAA+CGG | 0.576638 | 8.1:+17672375 | None:intergenic |
| GGTATCAAATGGCCAAGAAG+TGG | 0.579507 | 8.1:-17671344 | MS.gene56880:CDS |
| TATGTGTTACAACAATGGGT+TGG | 0.580004 | 8.1:-17671626 | MS.gene56880:CDS |
| TAATTTGACAGCCTCGCTCA+AGG | 0.580135 | 8.1:+17670766 | None:intergenic |
| CCACTAGCAATCTCTTCTGA+AGG | 0.584600 | 8.1:+17671076 | None:intergenic |
| TTATTATAGATGTTCTTAGA+GGG | 0.586527 | 8.1:+17672417 | None:intergenic |
| CACATAACCAGATCCAAACT+CGG | 0.593249 | 8.1:+17671832 | None:intergenic |
| GATAACTCGAGAGCTTTCCT+CGG | 0.595321 | 8.1:+17671898 | None:intergenic |
| GTTGTATAATAGAACATGGA+AGG | 0.597870 | 8.1:-17671164 | MS.gene56880:CDS |
| GCGGCGGATAGAAGGTTGAT+GGG | 0.602788 | 8.1:-17671436 | MS.gene56880:CDS |
| GAGATACATAATGATGCCCC+TGG | 0.603731 | 8.1:-17670977 | MS.gene56880:CDS |
| ACCCTCTTCTCTTGAAGAGG+CGG | 0.608927 | 8.1:-17671455 | MS.gene56880:CDS |
| TTTCATTAGGAGAGAATCCG+AGG | 0.611050 | 8.1:-17671915 | MS.gene56880:CDS |
| CAGGAATTGAAGCTCAAATG+GGG | 0.612615 | 8.1:-17670937 | MS.gene56880:CDS |
| CCTTCAGAAGAGATTGCTAG+TGG | 0.615589 | 8.1:-17671076 | MS.gene56880:CDS |
| GCCGCCTCTTCAAGAGAAGA+GGG | 0.620028 | 8.1:+17671454 | None:intergenic |
| AAACACCTAAAAGTGTTGAG+AGG | 0.620977 | 8.1:-17672362 | MS.gene56880:CDS |
| TTATCACCCTGAAACTCTTG+GGG | 0.630860 | 8.1:-17670702 | MS.gene56880:CDS |
| TTGCCATGCTTGCTAAAACA+AGG | 0.632268 | 8.1:+17671368 | None:intergenic |
| CATTAAGTTGCACACAACAA+AGG | 0.635240 | 8.1:+17670789 | None:intergenic |
| TGCAATTTGACGAGGCAGAG+AGG | 0.636429 | 8.1:-17671519 | MS.gene56880:CDS |
| ATATTAGTGGAGAACAAATG+AGG | 0.636511 | 8.1:-17672236 | MS.gene56880:CDS |
| AATTGTGTTCTGTTGGCCAG+GGG | 0.640099 | 8.1:+17670961 | None:intergenic |
| AGCACTCGAGTTACTGCACA+AGG | 0.644367 | 8.1:-17671005 | MS.gene56880:CDS |
| TCAAGCATTGCAATTTGACG+AGG | 0.658379 | 8.1:-17671527 | MS.gene56880:CDS |
| ACAAAGACCGATCCAACCGA+AGG | 0.663368 | 8.1:+17671199 | None:intergenic |
| ATCATTGGCTCGATACGATG+AGG | 0.668088 | 8.1:-17671281 | MS.gene56880:CDS |
| GCAACTTAATGCCTTGAGCG+AGG | 0.674178 | 8.1:-17670777 | MS.gene56880:CDS |
| AGGAATTGAAGCTCAAATGG+GGG | 0.710252 | 8.1:-17670936 | MS.gene56880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATTTAGATTTATTATAT+AGG | - | chr8.1:17671477-17671496 | MS.gene56880:CDS | 10.0% |
| !!! | ATTGTATTATTTTAATACAA+TGG | - | chr8.1:17671652-17671671 | MS.gene56880:CDS | 10.0% |
| !!! | TATTATTTATTATTTTGACT+TGG | + | chr8.1:17670665-17670684 | None:intergenic | 10.0% |
| !! | ATCATGTTTATTTGTAAAAT+TGG | + | chr8.1:17672474-17672493 | None:intergenic | 15.0% |
| !! | ATTTATATTTACCCAATATT+GGG | + | chr8.1:17671533-17671552 | None:intergenic | 15.0% |
| !! | ATTTCAAAAGTTAAACTAAA+AGG | - | chr8.1:17670764-17670783 | MS.gene56880:CDS | 15.0% |
| !! | TATAAGCATCAATAAAATAT+AGG | - | chr8.1:17670046-17670065 | MS.gene56880:intron | 15.0% |
| !!! | ATTTTTATTAAAGAAAGCAA+GGG | - | chr8.1:17668264-17668283 | MS.gene56880:intron | 15.0% |
| !!! | ATTTTTCTCTAAAACAAAAA+CGG | + | chr8.1:17670550-17670569 | None:intergenic | 15.0% |
| !!! | GTATTTTAATTATTGAATCT+AGG | + | chr8.1:17672090-17672109 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTAGAGAAAAATA+AGG | - | chr8.1:17670551-17670570 | MS.gene56880:intron | 15.0% |
| !! | ATAATATACACACATCAATT+TGG | - | chr8.1:17672204-17672223 | MS.gene56880:CDS | 20.0% |
| !! | ATAATATTTGCAAACAAACA+AGG | + | chr8.1:17669620-17669639 | None:intergenic | 20.0% |
| !! | ATACCATTTATACTTGTTTA+TGG | + | chr8.1:17672031-17672050 | None:intergenic | 20.0% |
| !! | ATGTTTATTTGTAAAATTGG+AGG | + | chr8.1:17672471-17672490 | None:intergenic | 20.0% |
| !! | CTTGCTTTCTTTAATAAAAA+TGG | + | chr8.1:17668265-17668284 | None:intergenic | 20.0% |
| !! | GATTTATATTTACCCAATAT+TGG | + | chr8.1:17671534-17671553 | None:intergenic | 20.0% |
| !! | TAATATTTGCAAACAAACAA+GGG | + | chr8.1:17669619-17669638 | None:intergenic | 20.0% |
| !! | TACTATGATATACTATTTCA+GGG | - | chr8.1:17669910-17669929 | MS.gene56880:intron | 20.0% |
| !! | TCACATAATCATTTCTTATT+TGG | + | chr8.1:17669873-17669892 | None:intergenic | 20.0% |
| !! | TGTGCTAAATATAAAATTGA+TGG | + | chr8.1:17671163-17671182 | None:intergenic | 20.0% |
| !! | TTAAACTTTGATTATGCAAT+CGG | + | chr8.1:17671931-17671950 | None:intergenic | 20.0% |
| !! | TTATTATAGATGTTCTTAGA+GGG | + | chr8.1:17667794-17667813 | None:intergenic | 20.0% |
| !! | TTTATTATAGATGTTCTTAG+AGG | + | chr8.1:17667795-17667814 | None:intergenic | 20.0% |
| !!! | AATATGTCACCAATATTTTA+AGG | - | chr8.1:17671684-17671703 | MS.gene56880:CDS | 20.0% |
| !!! | AGTTTAACTTTTGAAATATG+TGG | + | chr8.1:17670761-17670780 | None:intergenic | 20.0% |
| !!! | CATTTTTATTAAAGAAAGCA+AGG | - | chr8.1:17668263-17668282 | MS.gene56880:intron | 20.0% |
| !!! | GTTTAACTTTTGAAATATGT+GGG | + | chr8.1:17670760-17670779 | None:intergenic | 20.0% |
| !!! | TTCATTTTATTTCCTTCAAT+TGG | + | chr8.1:17667752-17667771 | None:intergenic | 20.0% |
| !!! | TTCTATATTTCTGAAAAGAT+AGG | - | chr8.1:17670457-17670476 | MS.gene56880:intron | 20.0% |
| !!! | TTTAACTTTTGAAATATGTG+GGG | + | chr8.1:17670759-17670778 | None:intergenic | 20.0% |
| !!! | TTTTAATTATTGAATCTAGG+TGG | + | chr8.1:17672087-17672106 | None:intergenic | 20.0% |
| ! | AAATGGTGAAAAATATACTG+AGG | - | chr8.1:17668017-17668036 | MS.gene56880:intron | 25.0% |
| ! | AATGGTGAAAAATATACTGA+GGG | - | chr8.1:17668018-17668037 | MS.gene56880:intron | 25.0% |
| ! | ACATAATTGAATTCTCAAGT+TGG | + | chr8.1:17668567-17668586 | None:intergenic | 25.0% |
| ! | ACTAGATCTAATAATCAAGT+AGG | - | chr8.1:17669732-17669751 | MS.gene56880:intron | 25.0% |
| ! | ACTTGAATAAAATTCACACA+AGG | + | chr8.1:17671556-17671575 | None:intergenic | 25.0% |
| ! | ATGTATGTGGTATATATGTT+TGG | + | chr8.1:17671991-17672010 | None:intergenic | 25.0% |
| ! | CAAGTCTATAAAAGTAAACT+CGG | - | chr8.1:17671439-17671458 | MS.gene56880:CDS | 25.0% |
| ! | CAATTATGTGTTACAACAAT+GGG | - | chr8.1:17668578-17668597 | MS.gene56880:intron | 25.0% |
| ! | CTACCATAAACAAGTATAAA+TGG | - | chr8.1:17672025-17672044 | MS.gene56880:CDS | 25.0% |
| ! | CTAGATCTAATAATCAAGTA+GGG | - | chr8.1:17669733-17669752 | MS.gene56880:intron | 25.0% |
| ! | CTTGATATTCATAGAGAAAA+TGG | - | chr8.1:17668727-17668746 | MS.gene56880:intron | 25.0% |
| ! | GCCACTAAAACAATATAAAT+AGG | - | chr8.1:17670505-17670524 | MS.gene56880:intron | 25.0% |
| ! | GTACTATGATATACTATTTC+AGG | - | chr8.1:17669909-17669928 | MS.gene56880:intron | 25.0% |
| ! | GTCAATATTTGTGAATTTAG+CGG | + | chr8.1:17671384-17671403 | None:intergenic | 25.0% |
| ! | TATAGACTTGATGAAATAAG+AGG | + | chr8.1:17671429-17671448 | None:intergenic | 25.0% |
| ! | TCAATTATGTGTTACAACAA+TGG | - | chr8.1:17668577-17668596 | MS.gene56880:intron | 25.0% |
| ! | TGAGATACACCTTAAAATAT+TGG | + | chr8.1:17671696-17671715 | None:intergenic | 25.0% |
| ! | TTCTAATATTCACGTACAAA+AGG | + | chr8.1:17670405-17670424 | None:intergenic | 25.0% |
| ! | TTTCCTATAGTGTATGATAA+TGG | + | chr8.1:17671192-17671211 | None:intergenic | 25.0% |
| !! | AAAATATTGGTGACATATTG+TGG | + | chr8.1:17671683-17671702 | None:intergenic | 25.0% |
| !! | ATGTTTGATTTATCTATGTG+TGG | + | chr8.1:17671631-17671650 | None:intergenic | 25.0% |
| !! | TTCTAAATTTTCGTTCAACA+GGG | - | chr8.1:17671822-17671841 | MS.gene56880:CDS | 25.0% |
| !! | TTTCTAAATTTTCGTTCAAC+AGG | - | chr8.1:17671821-17671840 | MS.gene56880:CDS | 25.0% |
| !!! | GCCTATTTATATTGTTTTAG+TGG | + | chr8.1:17670509-17670528 | None:intergenic | 25.0% |
| !!! | GGTTTTGTTCTTAATCAAAT+GGG | - | chr8.1:17669396-17669415 | MS.gene56880:intron | 25.0% |
| !!! | TAGACCTGAATATATTTTTG+TGG | + | chr8.1:17671746-17671765 | None:intergenic | 25.0% |
| !!! | TCAATCATTTTGTTTGTCTA+AGG | - | chr8.1:17672303-17672322 | MS.gene56880:CDS | 25.0% |
| !!! | TGGTTTTGTTCTTAATCAAA+TGG | - | chr8.1:17669395-17669414 | MS.gene56880:intron | 25.0% |
| !!! | TTAACTTTTGAAATATGTGG+GGG | + | chr8.1:17670758-17670777 | None:intergenic | 25.0% |
| !!! | TTATATAATGGGTTACTGTT+TGG | + | chr8.1:17670174-17670193 | None:intergenic | 25.0% |
| AAACCTAAGAATGCTTCTAT+TGG | - | chr8.1:17668172-17668191 | MS.gene56880:intron | 30.0% | |
| AATGCCTCAATATCATGAAA+GGG | + | chr8.1:17669665-17669684 | None:intergenic | 30.0% | |
| ACATGCATACAGATTTCAAT+GGG | - | chr8.1:17672238-17672257 | MS.gene56880:CDS | 30.0% | |
| ACTCGTTCTCTTTAAATCAA+AGG | - | chr8.1:17672406-17672425 | MS.gene56880:CDS | 30.0% | |
| AGTGCCACAAAAATATATTC+AGG | - | chr8.1:17671739-17671758 | MS.gene56880:CDS | 30.0% | |
| ATAATAGAACATGGAAGGTA+AGG | - | chr8.1:17669049-17669068 | MS.gene56880:intron | 30.0% | |
| ATATCAGTTACGCATGATAA+AGG | + | chr8.1:17672160-17672179 | None:intergenic | 30.0% | |
| ATATTAGTGGAGAACAAATG+AGG | - | chr8.1:17667972-17667991 | MS.gene56880:intron | 30.0% | |
| CATCCATTATCATACACTAT+AGG | - | chr8.1:17671186-17671205 | MS.gene56880:CDS | 30.0% | |
| CCTAAAAATCTCAAAAACCA+TGG | + | chr8.1:17669837-17669856 | None:intergenic | 30.0% | |
| CTCTGATATGATTCATATCA+GGG | + | chr8.1:17670278-17670297 | None:intergenic | 30.0% | |
| CTGAGTTGTATAATAGAACA+TGG | - | chr8.1:17669040-17669059 | MS.gene56880:intron | 30.0% | |
| CTTATCTGTTCTTGAAATTG+CGG | - | chr8.1:17670088-17670107 | MS.gene56880:intron | 30.0% | |
| GTAACCCATTATATAACATG+AGG | - | chr8.1:17670178-17670197 | MS.gene56880:intron | 30.0% | |
| GTTGTATAATAGAACATGGA+AGG | - | chr8.1:17669044-17669063 | MS.gene56880:intron | 30.0% | |
| TAATAGAACATGGAAGGTAA+GGG | - | chr8.1:17669050-17669069 | MS.gene56880:intron | 30.0% | |
| TAATCAGGAACTCAATCTAT+TGG | - | chr8.1:17670338-17670357 | MS.gene56880:intron | 30.0% | |
| TAATGCCTCAATATCATGAA+AGG | + | chr8.1:17669666-17669685 | None:intergenic | 30.0% | |
| TACATGCATACAGATTTCAA+TGG | - | chr8.1:17672237-17672256 | MS.gene56880:CDS | 30.0% | |
| TATCAGTTACGCATGATAAA+GGG | + | chr8.1:17672159-17672178 | None:intergenic | 30.0% | |
| TATGATATACTATTTCAGGG+TGG | - | chr8.1:17669913-17669932 | MS.gene56880:intron | 30.0% | |
| TATTCAGGTCTACTTAGATT+AGG | - | chr8.1:17671754-17671773 | MS.gene56880:CDS | 30.0% | |
| TCAGAATTTAGCCATATTAG+TGG | - | chr8.1:17667959-17667978 | MS.gene56880:intron | 30.0% | |
| TCATTTGTTCTCCACTAATA+TGG | + | chr8.1:17667973-17667992 | None:intergenic | 30.0% | |
| ! | AAGGTTAAAAAGAGTTTTCC+TGG | - | chr8.1:17670783-17670802 | MS.gene56880:CDS | 30.0% |
| ! | AGAAAAATGACTTTGAAGAG+AGG | - | chr8.1:17670366-17670385 | MS.gene56880:intron | 30.0% |
| ! | AGCTTGAATTTGATAATCAC+TGG | - | chr8.1:17670308-17670327 | MS.gene56880:intron | 30.0% |
| ! | GAAGTACAAAGAAAGGTTTT+GGG | - | chr8.1:17668604-17668623 | MS.gene56880:intron | 30.0% |
| ! | GGTCTTATATGTGAAACTAA+TGG | - | chr8.1:17668793-17668812 | MS.gene56880:intron | 30.0% |
| ! | TCTAAATTTTCGTTCAACAG+GGG | - | chr8.1:17671823-17671842 | MS.gene56880:CDS | 30.0% |
| ! | TGAAGAAGCAAAGATTGTTT+TGG | - | chr8.1:17669467-17669486 | MS.gene56880:intron | 30.0% |
| ! | TTATGGTAGTGTTTACTTGA+AGG | + | chr8.1:17672014-17672033 | None:intergenic | 30.0% |
| !! | CAAATAACTATAGCTTGCTT+TGG | + | chr8.1:17669690-17669709 | None:intergenic | 30.0% |
| !! | TCATTTTGTTTGTCTAAGGA+AGG | - | chr8.1:17672307-17672326 | MS.gene56880:CDS | 30.0% |
| !!! | ATTGTTTTGGAACAAGAGTA+CGG | - | chr8.1:17669480-17669499 | MS.gene56880:intron | 30.0% |
| !!! | CCATGGTTTTTGAGATTTTT+AGG | - | chr8.1:17669834-17669853 | MS.gene56880:intron | 30.0% |
| !!! | GTTGTACTTTGTTTTCTCAA+AGG | + | chr8.1:17668133-17668152 | None:intergenic | 30.0% |
| AAACTACATGCCATATAGTG+TGG | + | chr8.1:17669808-17669827 | None:intergenic | 35.0% | |
| AACTACATGCCATATAGTGT+GGG | + | chr8.1:17669807-17669826 | None:intergenic | 35.0% | |
| AACTTTGATTATGCAATCGG+TGG | + | chr8.1:17671928-17671947 | None:intergenic | 35.0% | |
| AATAAAAATGGTCCAAGCTC+AGG | + | chr8.1:17668253-17668272 | None:intergenic | 35.0% | |
| ACATCGTAGATGTAATGCAT+CGG | - | chr8.1:17670810-17670829 | MS.gene56880:CDS | 35.0% | |
| ACCATCAATATCAAGAGCTA+AGG | - | chr8.1:17668057-17668076 | MS.gene56880:intron | 35.0% | |
| AGACTTAACACACAGTGAAT+TGG | - | chr8.1:17670872-17670891 | MS.gene56880:CDS | 35.0% | |
| AGTTGCAGAAAATTATACCG+TGG | + | chr8.1:17672389-17672408 | None:intergenic | 35.0% | |
| ATAAACCAACCCACACTATA+TGG | - | chr8.1:17669795-17669814 | MS.gene56880:intron | 35.0% | |
| ATCACTGGAATGATGTAATC+AGG | - | chr8.1:17670323-17670342 | MS.gene56880:intron | 35.0% | |
| ATCCGTATATAAAACCCCTT+GGG | + | chr8.1:17671361-17671380 | None:intergenic | 35.0% | |
| ATGATTACCATAAGCCCTTA+TGG | + | chr8.1:17671120-17671139 | None:intergenic | 35.0% | |
| ATGCTTCTATTGGAAGATCA+AGG | - | chr8.1:17668182-17668201 | MS.gene56880:intron | 35.0% | |
| CACGCCTCATGTTATATAAT+GGG | + | chr8.1:17670185-17670204 | None:intergenic | 35.0% | |
| CAGTTTGGGTCATTATAATG+AGG | - | chr8.1:17668426-17668445 | MS.gene56880:intron | 35.0% | |
| CCATCAATATCAAGAGCTAA+GGG | - | chr8.1:17668058-17668077 | MS.gene56880:intron | 35.0% | |
| CCTCTGATATGATTCATATC+AGG | + | chr8.1:17670279-17670298 | None:intergenic | 35.0% | |
| CCTGATATGAATCATATCAG+AGG | - | chr8.1:17670276-17670295 | MS.gene56880:CDS | 35.0% | |
| GCAGCAATATATTGCAGTTT+GGG | - | chr8.1:17668412-17668431 | MS.gene56880:intron | 35.0% | |
| GGACGATGCAATTGATATTA+TGG | - | chr8.1:17669934-17669953 | MS.gene56880:intron | 35.0% | |
| GTTTACTTGAAGGATGTATG+TGG | + | chr8.1:17672004-17672023 | None:intergenic | 35.0% | |
| TACATCTACGATGTTTATCC+AGG | + | chr8.1:17670804-17670823 | None:intergenic | 35.0% | |
| TATATACCCCAAGAGTTTCA+GGG | + | chr8.1:17669515-17669534 | None:intergenic | 35.0% | |
| TATGTGTTACAACAATGGGT+TGG | - | chr8.1:17668582-17668601 | MS.gene56880:intron | 35.0% | |
| TCACGCCTCATGTTATATAA+TGG | + | chr8.1:17670186-17670205 | None:intergenic | 35.0% | |
| TCCATTATATCTCTTGAACG+TGG | + | chr8.1:17670598-17670617 | None:intergenic | 35.0% | |
| TGATTACCATAAGCCCTTAT+GGG | + | chr8.1:17671119-17671138 | None:intergenic | 35.0% | |
| TGCAGCAATATATTGCAGTT+TGG | - | chr8.1:17668411-17668430 | MS.gene56880:intron | 35.0% | |
| TGTTTGAGAATTCTGCGAAT+GGG | - | chr8.1:17668350-17668369 | MS.gene56880:intron | 35.0% | |
| TTCCCTAAATTTCTTCCCAA+GGG | - | chr8.1:17671343-17671362 | MS.gene56880:CDS | 35.0% | |
| TTGCATACAACAAGTGTCTT+GGG | + | chr8.1:17670915-17670934 | None:intergenic | 35.0% | |
| TTGTTTGAGAATTCTGCGAA+TGG | - | chr8.1:17668349-17668368 | MS.gene56880:intron | 35.0% | |
| TTTCCATTCTTCCTTTCAAC+AGG | + | chr8.1:17668106-17668125 | None:intergenic | 35.0% | |
| TTTCCCTAAATTTCTTCCCA+AGG | - | chr8.1:17671342-17671361 | MS.gene56880:CDS | 35.0% | |
| ! | AAGCATTGTAAGATTCAGTC+TGG | + | chr8.1:17669320-17669339 | None:intergenic | 35.0% |
| ! | ACATTTGATAATCCTGAGCT+TGG | - | chr8.1:17668238-17668257 | MS.gene56880:intron | 35.0% |
| ! | CATTAAGTTGCACACAACAA+AGG | + | chr8.1:17669422-17669441 | None:intergenic | 35.0% |
| ! | GAGAAAAAATCGGCTTTCTT+TGG | - | chr8.1:17669375-17669394 | MS.gene56880:intron | 35.0% |
| ! | GCAAGGGATTTGATTTCATT+AGG | - | chr8.1:17668280-17668299 | MS.gene56880:intron | 35.0% |
| ! | GTGTTAAGTCTCATTAGTCT+AGG | + | chr8.1:17670863-17670882 | None:intergenic | 35.0% |
| ! | TAAGTCTCATTAGTCTAGGA+CGG | + | chr8.1:17670859-17670878 | None:intergenic | 35.0% |
| ! | TGAAACCTCTCAACACTTTT+AGG | + | chr8.1:17667854-17667873 | None:intergenic | 35.0% |
| ! | TGAATTGGTTTAGCAAGCTA+TGG | - | chr8.1:17670887-17670906 | MS.gene56880:CDS | 35.0% |
| ! | TTCGTTGACGCTGAAAATTT+TGG | + | chr8.1:17672445-17672464 | None:intergenic | 35.0% |
| !! | AAACACCTAAAAGTGTTGAG+AGG | - | chr8.1:17667846-17667865 | MS.gene56880:intron | 35.0% |
| !! | ATTTATTTTCCCCAATGTGG+GGG | + | chr8.1:17671608-17671627 | None:intergenic | 35.0% |
| !! | CAACACTTTTAGGTGTTTGT+GGG | + | chr8.1:17667844-17667863 | None:intergenic | 35.0% |
| !! | CTTCCAATAGAAGCATTCTT+AGG | + | chr8.1:17668178-17668197 | None:intergenic | 35.0% |
| !! | GATTTATTTTCCCCAATGTG+GGG | + | chr8.1:17671609-17671628 | None:intergenic | 35.0% |
| !! | GGAAGTACAAAGAAAGGTTT+TGG | - | chr8.1:17668603-17668622 | MS.gene56880:intron | 35.0% |
| !! | GGATTTATTTTCCCCAATGT+GGG | + | chr8.1:17671610-17671629 | None:intergenic | 35.0% |
| !! | TCAACACTTTTAGGTGTTTG+TGG | + | chr8.1:17667845-17667864 | None:intergenic | 35.0% |
| !! | TGGATTTATTTTCCCCAATG+TGG | + | chr8.1:17671611-17671630 | None:intergenic | 35.0% |
| !! | TTCCCAAGGGGTTTTATATA+CGG | - | chr8.1:17671356-17671375 | MS.gene56880:CDS | 35.0% |
| !! | TTTTCAAGACTCACAAAGGA+GGG | - | chr8.1:17668980-17668999 | MS.gene56880:intron | 35.0% |
| AAATTGCGGTGATTTGACGT+CGG | - | chr8.1:17670102-17670121 | MS.gene56880:intron | 40.0% | |
| AACCCCTTGGGAAGAAATTT+AGG | + | chr8.1:17671349-17671368 | None:intergenic | 40.0% | |
| AACGTGGCATTAATACAGCT+TGG | + | chr8.1:17670582-17670601 | None:intergenic | 40.0% | |
| AAGCGACAACACCCAATATT+GGG | - | chr8.1:17671519-17671538 | MS.gene56880:CDS | 40.0% | |
| ACCCATTGAACCTTCTTCAT+GGG | - | chr8.1:17671261-17671280 | MS.gene56880:CDS | 40.0% | |
| ACCCCTTGGGAAGAAATTTA+GGG | + | chr8.1:17671348-17671367 | None:intergenic | 40.0% | |
| ACCTATATGAGTGTCAAGTG+GGG | + | chr8.1:17671062-17671081 | None:intergenic | 40.0% | |
| AGATGTTCTTAGAGGGTGAA+GGG | + | chr8.1:17667787-17667806 | None:intergenic | 40.0% | |
| AGCATGGCAATGGTATCAAA+TGG | - | chr8.1:17668853-17668872 | MS.gene56880:intron | 40.0% | |
| AGCTACGGGAGAGAAAAAAT+CGG | - | chr8.1:17669365-17669384 | MS.gene56880:intron | 40.0% | |
| AGGAATTGAAGCTCAAATGG+GGG | - | chr8.1:17669272-17669291 | MS.gene56880:intron | 40.0% | |
| ATCCCATGAAGAAGGTTCAA+TGG | + | chr8.1:17671266-17671285 | None:intergenic | 40.0% | |
| ATCTATGAAAATCCCATGCC+TGG | - | chr8.1:17669105-17669124 | MS.gene56880:intron | 40.0% | |
| ATGAGGCGGATAAATCCTTA+AGG | + | chr8.1:17670221-17670240 | None:intergenic | 40.0% | |
| CACATAACCAGATCCAAACT+CGG | + | chr8.1:17668379-17668398 | None:intergenic | 40.0% | |
| CACCTATATGAGTGTCAAGT+GGG | + | chr8.1:17671063-17671082 | None:intergenic | 40.0% | |
| CACTCGAAACGACAAGTAAT+GGG | + | chr8.1:17671311-17671330 | None:intergenic | 40.0% | |
| CAGGAATTGAAGCTCAAATG+GGG | - | chr8.1:17669271-17669290 | MS.gene56880:intron | 40.0% | |
| CCTTCAATTGGAACAATACC+TGG | + | chr8.1:17667740-17667759 | None:intergenic | 40.0% | |
| CTACAAGTTTCACCAACTCT+TGG | + | chr8.1:17668640-17668659 | None:intergenic | 40.0% | |
| CTATATACCCCAAGAGTTTC+AGG | + | chr8.1:17669516-17669535 | None:intergenic | 40.0% | |
| CTTATCACCCTGAAACTCTT+GGG | - | chr8.1:17669505-17669524 | MS.gene56880:intron | 40.0% | |
| CTTCAAAACCTCCTGTTGAA+AGG | - | chr8.1:17668092-17668111 | MS.gene56880:intron | 40.0% | |
| CTTGCATACAACAAGTGTCT+TGG | + | chr8.1:17670916-17670935 | None:intergenic | 40.0% | |
| GAAATTCCTGTTGTTGAGGA+AGG | - | chr8.1:17668475-17668494 | MS.gene56880:intron | 40.0% | |
| GAAGATGGAGATAGTGAAAG+AGG | - | chr8.1:17667994-17668013 | MS.gene56880:intron | 40.0% | |
| GAAGTGAGAGAGGAAAAACT+TGG | - | chr8.1:17669968-17669987 | MS.gene56880:intron | 40.0% | |
| GAGAATACCTCCTTATAGCA+TGG | - | chr8.1:17670483-17670502 | MS.gene56880:intron | 40.0% | |
| GATCCGTATATAAAACCCCT+TGG | + | chr8.1:17671362-17671381 | None:intergenic | 40.0% | |
| GATCGAAATTCCTGTTGTTG+AGG | - | chr8.1:17668471-17668490 | MS.gene56880:intron | 40.0% | |
| GATCTCCAATCACAAAGGTT+GGG | - | chr8.1:17671283-17671302 | MS.gene56880:CDS | 40.0% | |
| GCAGGAATTGAAGCTCAAAT+GGG | - | chr8.1:17669270-17669289 | MS.gene56880:intron | 40.0% | |
| GCATCCCTTTCATGATATTG+AGG | - | chr8.1:17669658-17669677 | MS.gene56880:intron | 40.0% | |
| GCCACGTTCAAGAGATATAA+TGG | - | chr8.1:17670594-17670613 | MS.gene56880:intron | 40.0% | |
| GGAAGAACATGTTGTATCCT+GGG | + | chr8.1:17670257-17670276 | None:intergenic | 40.0% | |
| GGAGATAGTGAAAGAGGAAA+TGG | - | chr8.1:17668000-17668019 | MS.gene56880:intron | 40.0% | |
| GGGGTCATATACTATGTGTT+GGG | - | chr8.1:17669291-17669310 | MS.gene56880:intron | 40.0% | |
| GTACATTGTAGAAGTGAGAG+AGG | - | chr8.1:17669958-17669977 | MS.gene56880:intron | 40.0% | |
| GTAGATGTAATGCATCGGAA+CGG | - | chr8.1:17670815-17670834 | MS.gene56880:CDS | 40.0% | |
| TACCCATTGAACCTTCTTCA+TGG | - | chr8.1:17671260-17671279 | MS.gene56880:CDS | 40.0% | |
| TAGATGTTCTTAGAGGGTGA+AGG | + | chr8.1:17667788-17667807 | None:intergenic | 40.0% | |
| TCACCTATATGAGTGTCAAG+TGG | + | chr8.1:17671064-17671083 | None:intergenic | 40.0% | |
| TCAGGAACTCAATCTATTGG+AGG | - | chr8.1:17670341-17670360 | MS.gene56880:intron | 40.0% | |
| TCCCATGAAGAAGGTTCAAT+GGG | + | chr8.1:17671265-17671284 | None:intergenic | 40.0% | |
| TCCCTAAATTTCTTCCCAAG+GGG | - | chr8.1:17671344-17671363 | MS.gene56880:CDS | 40.0% | |
| TGACAAAGTCACTGTCCTTA+AGG | - | chr8.1:17670203-17670222 | MS.gene56880:intron | 40.0% | |
| TGCAGGAATTGAAGCTCAAA+TGG | - | chr8.1:17669269-17669288 | MS.gene56880:intron | 40.0% | |
| TGGAGAACAAATGAGGAAGA+TGG | - | chr8.1:17667979-17667998 | MS.gene56880:intron | 40.0% | |
| TGGAGACACATTCCTATCAT+TGG | - | chr8.1:17668912-17668931 | MS.gene56880:intron | 40.0% | |
| TGGTTGTAGCATACACTAGA+TGG | + | chr8.1:17671089-17671108 | None:intergenic | 40.0% | |
| TTATCACCCTGAAACTCTTG+GGG | - | chr8.1:17669506-17669525 | MS.gene56880:intron | 40.0% | |
| TTCCTGCAATTGTGTTCTGT+TGG | + | chr8.1:17669257-17669276 | None:intergenic | 40.0% | |
| TTTCATTAGGAGAGAATCCG+AGG | - | chr8.1:17668293-17668312 | MS.gene56880:intron | 40.0% | |
| ! | AAGTCTCATTAGTCTAGGAC+GGG | + | chr8.1:17670858-17670877 | None:intergenic | 40.0% |
| ! | CCAGGTATTGTTCCAATTGA+AGG | - | chr8.1:17667737-17667756 | MS.gene56880:CDS | 40.0% |
| ! | CCCTTAGCTCTTGATATTGA+TGG | + | chr8.1:17668061-17668080 | None:intergenic | 40.0% |
| ! | GCTTTGGATCTGATAGTGAT+TGG | - | chr8.1:17667924-17667943 | MS.gene56880:intron | 40.0% |
| ! | TCAAGCATTGCAATTTGACG+AGG | - | chr8.1:17668681-17668700 | MS.gene56880:intron | 40.0% |
| ! | TGGGTTGGAAGTACAAAGAA+AGG | - | chr8.1:17668597-17668616 | MS.gene56880:intron | 40.0% |
| ! | TTGCCATGCTTGCTAAAACA+AGG | + | chr8.1:17668843-17668862 | None:intergenic | 40.0% |
| !! | AGACACTTGTTGTATGCAAG+AGG | - | chr8.1:17670916-17670935 | MS.gene56880:CDS | 40.0% |
| !! | AGAGAGGAAAAACTTGGTGT+TGG | - | chr8.1:17669974-17669993 | MS.gene56880:intron | 40.0% |
| !! | ATAATGGGTTACTGTTTGGC+AGG | + | chr8.1:17670170-17670189 | None:intergenic | 40.0% |
| !! | CAAGAGTTGGTGAAACTTGT+AGG | - | chr8.1:17668638-17668657 | MS.gene56880:intron | 40.0% |
| !! | CTTTCAACAGGAGGTTTTGA+AGG | + | chr8.1:17668094-17668113 | None:intergenic | 40.0% |
| !! | GACGCTGAAAATTTTGGTAG+CGG | + | chr8.1:17672439-17672458 | None:intergenic | 40.0% |
| !! | GGCGTATAAAAAAGCGTTAG+CGG | - | chr8.1:17668957-17668976 | MS.gene56880:intron | 40.0% |
| !! | GTTTTAGTGGCCATGCTATA+AGG | + | chr8.1:17670496-17670515 | None:intergenic | 40.0% |
| !! | GTTTTCAAGACTCACAAAGG+AGG | - | chr8.1:17668979-17668998 | MS.gene56880:intron | 40.0% |
| !! | TCGATCGATCGCTCTAAAAT+TGG | + | chr8.1:17668457-17668476 | None:intergenic | 40.0% |
| !!! | CGCTTTTTTATACGCCAAGA+TGG | + | chr8.1:17668953-17668972 | None:intergenic | 40.0% |
| !!! | TGTTTTAGCAAGCATGGCAA+TGG | - | chr8.1:17668843-17668862 | MS.gene56880:intron | 40.0% |
| AAATGGCCAAGAAGTGGAAG+TGG | - | chr8.1:17668870-17668889 | MS.gene56880:intron | 45.0% | |
| AAGTCGAGTCGACGATTCTA+AGG | - | chr8.1:17668210-17668229 | MS.gene56880:intron | 45.0% | |
| AATTGTGTTCTGTTGGCCAG+GGG | + | chr8.1:17669250-17669269 | None:intergenic | 45.0% | |
| ACAACCATACACCACCCATA+AGG | - | chr8.1:17671102-17671121 | MS.gene56880:CDS | 45.0% | |
| ACACGCTCAAGTCAAAGCTT+TGG | - | chr8.1:17667908-17667927 | MS.gene56880:intron | 45.0% | |
| ACATGCCATATAGTGTGGGT+TGG | + | chr8.1:17669803-17669822 | None:intergenic | 45.0% | |
| AGAACATGTTGTATCCTGGG+AGG | + | chr8.1:17670254-17670273 | None:intergenic | 45.0% | |
| ATACCGTGGATATGTCACAC+AGG | + | chr8.1:17672375-17672394 | None:intergenic | 45.0% | |
| ATTTCGCAATTGCGTGTTGC+TGG | + | chr8.1:17668501-17668520 | None:intergenic | 45.0% | |
| CAAAGGAGGGAATCATCCTT+CGG | - | chr8.1:17668993-17669012 | MS.gene56880:intron | 45.0% | |
| CAACCATACACCACCCATAA+GGG | - | chr8.1:17671103-17671122 | MS.gene56880:CDS | 45.0% | |
| CAAGCGACAACACCCAATAT+TGG | - | chr8.1:17671518-17671537 | MS.gene56880:CDS | 45.0% | |
| CAATTGTGTTCTGTTGGCCA+GGG | + | chr8.1:17669251-17669270 | None:intergenic | 45.0% | |
| CATCGTATCGAGCCAATGAT+AGG | + | chr8.1:17668927-17668946 | None:intergenic | 45.0% | |
| CATGGGATCTCCAATCACAA+AGG | - | chr8.1:17671278-17671297 | MS.gene56880:CDS | 45.0% | |
| CCAAGAGTTTCAGGGTGATA+AGG | + | chr8.1:17669507-17669526 | None:intergenic | 45.0% | |
| CCACTAGCAATCTCTTCTGA+AGG | + | chr8.1:17669135-17669154 | None:intergenic | 45.0% | |
| CCACTCGAAACGACAAGTAA+TGG | + | chr8.1:17671312-17671331 | None:intergenic | 45.0% | |
| CCATTCTTCCTTTCAACAGG+AGG | + | chr8.1:17668103-17668122 | None:intergenic | 45.0% | |
| CCTCCTGTTGAAAGGAAGAA+TGG | - | chr8.1:17668100-17668119 | MS.gene56880:intron | 45.0% | |
| CCTTATCACCCTGAAACTCT+TGG | - | chr8.1:17669504-17669523 | MS.gene56880:intron | 45.0% | |
| CCTTCAGAAGAGATTGCTAG+TGG | - | chr8.1:17669132-17669151 | MS.gene56880:intron | 45.0% | |
| CGCGTAACAGCAAGAATTGT+GGG | + | chr8.1:17670962-17670981 | None:intergenic | 45.0% | |
| CGTAACAGCAAGAATTGTGG+GGG | + | chr8.1:17670960-17670979 | None:intergenic | 45.0% | |
| GAACCTGTGTGACATATCCA+CGG | - | chr8.1:17672369-17672388 | MS.gene56880:CDS | 45.0% | |
| GAATCATCCTTCGGTTGGAT+CGG | - | chr8.1:17669002-17669021 | MS.gene56880:intron | 45.0% | |
| GAGATACATAATGATGCCCC+TGG | - | chr8.1:17669231-17669250 | MS.gene56880:intron | 45.0% | |
| GATAACTCGAGAGCTTTCCT+CGG | + | chr8.1:17668313-17668332 | None:intergenic | 45.0% | |
| GATTGGAGATCCCATGAAGA+AGG | + | chr8.1:17671274-17671293 | None:intergenic | 45.0% | |
| GCACATATGATGCAATTGGC+AGG | - | chr8.1:17669547-17669566 | MS.gene56880:intron | 45.0% | |
| GCATGTAGTTTCTTGCTCCA+TGG | - | chr8.1:17669817-17669836 | MS.gene56880:intron | 45.0% | |
| GCGTAACAGCAAGAATTGTG+GGG | + | chr8.1:17670961-17670980 | None:intergenic | 45.0% | |
| GCTGGCACATATGATGCAAT+TGG | - | chr8.1:17669543-17669562 | MS.gene56880:intron | 45.0% | |
| GGAGACACTTATGCTATGCT+AGG | - | chr8.1:17668541-17668560 | MS.gene56880:intron | 45.0% | |
| GGAGTAACTGATCCAAGAGT+TGG | - | chr8.1:17668625-17668644 | MS.gene56880:intron | 45.0% | |
| GGATCTCCAATCACAAAGGT+TGG | - | chr8.1:17671282-17671301 | MS.gene56880:CDS | 45.0% | |
| GGGAAGAACATGTTGTATCC+TGG | + | chr8.1:17670258-17670277 | None:intergenic | 45.0% | |
| GGGGGTCATATACTATGTGT+TGG | - | chr8.1:17669290-17669309 | MS.gene56880:intron | 45.0% | |
| GGGGTATATAGCAATCTTGC+TGG | - | chr8.1:17669525-17669544 | MS.gene56880:intron | 45.0% | |
| GGTATCAAATGGCCAAGAAG+TGG | - | chr8.1:17668864-17668883 | MS.gene56880:intron | 45.0% | |
| TAATTTGACAGCCTCGCTCA+AGG | + | chr8.1:17669445-17669464 | None:intergenic | 45.0% | |
| TGGATCGGTCTTTGTACGTT+TGG | - | chr8.1:17669017-17669036 | MS.gene56880:intron | 45.0% | |
| TGTCTCAAAGCTTCGAGCTA+CGG | - | chr8.1:17669350-17669369 | MS.gene56880:intron | 45.0% | |
| TTACCATAAGCCCTTATGGG+TGG | + | chr8.1:17671116-17671135 | None:intergenic | 45.0% | |
| TTAGGTGTTTGTGGGCTCAA+CGG | + | chr8.1:17667836-17667855 | None:intergenic | 45.0% | |
| TTAGTGGCCATGCTATAAGG+AGG | + | chr8.1:17670493-17670512 | None:intergenic | 45.0% | |
| TTCACCCTCTTCTCTTGAAG+AGG | - | chr8.1:17668750-17668769 | MS.gene56880:intron | 45.0% | |
| ! | ATCTCTTCTGAAGGAACACC+AGG | + | chr8.1:17669126-17669145 | None:intergenic | 45.0% |
| ! | CAATATTGGGTGTTGTCGCT+TGG | + | chr8.1:17671520-17671539 | None:intergenic | 45.0% |
| ! | CCATTACTTGTCGTTTCGAG+TGG | - | chr8.1:17671309-17671328 | MS.gene56880:CDS | 45.0% |
| ! | CTAGAGCACTCATGAATACC+AGG | + | chr8.1:17671012-17671031 | None:intergenic | 45.0% |
| ! | GCATCTGTTGATTGCAGCAT+TGG | - | chr8.1:17668892-17668911 | MS.gene56880:intron | 45.0% |
| !! | ATCATTGGCTCGATACGATG+AGG | - | chr8.1:17668927-17668946 | MS.gene56880:intron | 45.0% |
| !! | CCACAATTCTTGCTGTTACG+CGG | - | chr8.1:17670960-17670979 | MS.gene56880:CDS | 45.0% |
| !! | GCGGTTTTCAAGACTCACAA+AGG | - | chr8.1:17668976-17668995 | MS.gene56880:intron | 45.0% |
| !!! | GCACCTTGTTTTAGCAAGCA+TGG | - | chr8.1:17668837-17668856 | MS.gene56880:intron | 45.0% |
| !!! | TCAACAGGAGGTTTTGAAGG+AGG | + | chr8.1:17668091-17668110 | None:intergenic | 45.0% |
| !!! | AAAATTTTATAATTAAAACA+TGG | - | chr8.1:17670631-17670650 | MS.gene56880:intron | 5.0% |
| !!! | AAATTTTATAATTAAAACAT+GGG | - | chr8.1:17670632-17670651 | MS.gene56880:intron | 5.0% |
| AAGCCCTTATGGGTGGTGTA+TGG | + | chr8.1:17671109-17671128 | None:intergenic | 50.0% | |
| AAGTGACAACACCCCCACAT+TGG | - | chr8.1:17671594-17671613 | MS.gene56880:CDS | 50.0% | |
| ACAAAGACCGATCCAACCGA+AGG | + | chr8.1:17669012-17669031 | None:intergenic | 50.0% | |
| ACACCACCCATAAGGGCTTA+TGG | - | chr8.1:17671110-17671129 | MS.gene56880:CDS | 50.0% | |
| ACCCTCTTCTCTTGAAGAGG+CGG | - | chr8.1:17668753-17668772 | MS.gene56880:intron | 50.0% | |
| AGCACTCGAGTTACTGCACA+AGG | - | chr8.1:17669203-17669222 | MS.gene56880:intron | 50.0% | |
| AGTGACAACACCCCCACATT+GGG | - | chr8.1:17671595-17671614 | MS.gene56880:CDS | 50.0% | |
| CCGCGTAACAGCAAGAATTG+TGG | + | chr8.1:17670963-17670982 | None:intergenic | 50.0% | |
| GAGGATATGCGCTTATGAGG+CGG | + | chr8.1:17670235-17670254 | None:intergenic | 50.0% | |
| GCAACTTAATGCCTTGAGCG+AGG | - | chr8.1:17669431-17669450 | MS.gene56880:intron | 50.0% | |
| GCAATTGTGTTCTGTTGGCC+AGG | + | chr8.1:17669252-17669271 | None:intergenic | 50.0% | |
| GCCCCACTTGACACTCATAT+AGG | - | chr8.1:17671058-17671077 | MS.gene56880:CDS | 50.0% | |
| GGCCAACAGAACACAATTGC+AGG | - | chr8.1:17669252-17669271 | MS.gene56880:intron | 50.0% | |
| GGGAACCCAACCTTTGTGAT+TGG | + | chr8.1:17671291-17671310 | None:intergenic | 50.0% | |
| GTCTCAAAGCTTCGAGCTAC+GGG | - | chr8.1:17669351-17669370 | MS.gene56880:intron | 50.0% | |
| GTCTCCAAGTTGCATGTGAC+TGG | + | chr8.1:17668527-17668546 | None:intergenic | 50.0% | |
| TCATAAGCGCATATCCTCCC+AGG | - | chr8.1:17670237-17670256 | MS.gene56880:intron | 50.0% | |
| TCGATACGATGAGGCCATCT+TGG | - | chr8.1:17668936-17668955 | MS.gene56880:intron | 50.0% | |
| TCTGAAGGAACACCAGGCAT+GGG | + | chr8.1:17669120-17669139 | None:intergenic | 50.0% | |
| TGCAATTTGACGAGGCAGAG+AGG | - | chr8.1:17668689-17668708 | MS.gene56880:intron | 50.0% | |
| TGCGAATGGGAAACCGAGTT+TGG | - | chr8.1:17668363-17668382 | MS.gene56880:intron | 50.0% | |
| TGGGAAACCGAGTTTGGATC+TGG | - | chr8.1:17668369-17668388 | MS.gene56880:intron | 50.0% | |
| TGGGAGGATATGCGCTTATG+AGG | + | chr8.1:17670238-17670257 | None:intergenic | 50.0% | |
| TGTGGGCTCAACGGTATTCT+TGG | + | chr8.1:17667827-17667846 | None:intergenic | 50.0% | |
| TTCAACAGGGGTCGACATAG+TGG | - | chr8.1:17671835-17671854 | MS.gene56880:CDS | 50.0% | |
| TTCGCCAGTCACATGCAACT+TGG | - | chr8.1:17668520-17668539 | MS.gene56880:intron | 50.0% | |
| ! | CAGATGCCACTTCCACTTCT+TGG | + | chr8.1:17668879-17668898 | None:intergenic | 50.0% |
| ! | TTCTGAAGGAACACCAGGCA+TGG | + | chr8.1:17669121-17669140 | None:intergenic | 50.0% |
| !! | AATGTGGGGGTGTTGTCACT+TGG | + | chr8.1:17671595-17671614 | None:intergenic | 50.0% |
| ATGAATACCAGGCACGCGCA+CGG | + | chr8.1:17671001-17671020 | None:intergenic | 55.0% | |
| CGGAACGGTGTAGCAAGCTA+TGG | - | chr8.1:17670830-17670849 | MS.gene56880:CDS | 55.0% | |
| CTCTTCTCTTGAAGAGGCGG+CGG | - | chr8.1:17668756-17668775 | MS.gene56880:intron | 55.0% | |
| GCCGCCTCTTCAAGAGAAGA+GGG | + | chr8.1:17668757-17668776 | None:intergenic | 55.0% | |
| GGAGGGAATCATCCTTCGGT+TGG | - | chr8.1:17668997-17669016 | MS.gene56880:intron | 55.0% | |
| GTGACAACACCCCCACATTG+GGG | - | chr8.1:17671596-17671615 | MS.gene56880:CDS | 55.0% | |
| TTACGCGGTTGTGCGCGAAT+AGG | - | chr8.1:17670975-17670994 | MS.gene56880:CDS | 55.0% | |
| TTGAAGAGGCGGCGGATAGA+AGG | - | chr8.1:17668764-17668783 | MS.gene56880:intron | 55.0% | |
| ! | GCGGCGGATAGAAGGTTGAT+GGG | - | chr8.1:17668772-17668791 | MS.gene56880:intron | 55.0% |
| !! | TGCTGGCCTTCCTCAACAAC+AGG | + | chr8.1:17668484-17668503 | None:intergenic | 55.0% |
| CGCCGCCTCTTCAAGAGAAG+AGG | + | chr8.1:17668758-17668777 | None:intergenic | 60.0% | |
| GGCGGCGGATAGAAGGTTGA+TGG | - | chr8.1:17668771-17668790 | MS.gene56880:intron | 60.0% | |
| !! | AGTGCTCTAGAGACCCGCCA+CGG | - | chr8.1:17671022-17671041 | MS.gene56880:CDS | 60.0% |
| CCGCCACGGTCTCATGCAAG+CGG | - | chr8.1:17671036-17671055 | MS.gene56880:CDS | 65.0% | |
| CCGCTTGCATGAGACCGTGG+CGG | + | chr8.1:17671039-17671058 | None:intergenic | 65.0% | |
| CGCTTGCATGAGACCGTGGC+GGG | + | chr8.1:17671038-17671057 | None:intergenic | 65.0% | |
| GAATAGGCCGTGCGCGTGCC+TGG | - | chr8.1:17670991-17671010 | MS.gene56880:CDS | 70.0% | |
| GGGCCGCTTGCATGAGACCG+TGG | + | chr8.1:17671042-17671061 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17667734 | 17672496 | 17667734 | ID=MS.gene56880 |
| chr8.1 | mRNA | 17667734 | 17672496 | 17667734 | ID=MS.gene56880.t1;Parent=MS.gene56880 |
| chr8.1 | exon | 17670662 | 17672496 | 17670662 | ID=MS.gene56880.t1.exon1;Parent=MS.gene56880.t1 |
| chr8.1 | CDS | 17670662 | 17672496 | 17670662 | ID=cds.MS.gene56880.t1;Parent=MS.gene56880.t1 |
| chr8.1 | exon | 17670260 | 17670299 | 17670260 | ID=MS.gene56880.t1.exon2;Parent=MS.gene56880.t1 |
| chr8.1 | CDS | 17670260 | 17670299 | 17670260 | ID=cds.MS.gene56880.t1;Parent=MS.gene56880.t1 |
| chr8.1 | exon | 17667734 | 17667802 | 17667734 | ID=MS.gene56880.t1.exon3;Parent=MS.gene56880.t1 |
| chr8.1 | CDS | 17667734 | 17667802 | 17667734 | ID=cds.MS.gene56880.t1;Parent=MS.gene56880.t1 |
| Gene Sequence |
| Protein sequence |
