AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57082

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57082.t1 MTR_6g007757 94.118 357 14 2 1 356 1 351 0.0 627
MS.gene57082.t1 MTR_6g007743 80.056 356 64 2 1 356 1 349 0.0 563
MS.gene57082.t1 MTR_6g007747 77.809 356 70 2 1 356 1 347 0.0 527
MS.gene57082.t1 MTR_6g007750 79.050 358 67 3 1 356 1 352 0.0 525
MS.gene57082.t1 MTR_6g007740 77.809 356 72 2 1 356 1 349 0.0 522
MS.gene57082.t1 MTR_6g007757 93.893 262 10 1 1 262 1 256 9.51e-173 481
MS.gene57082.t1 MTR_6g007753 77.219 338 65 4 24 356 303 633 7.27e-171 491
MS.gene57082.t1 MTR_6g007753 67.135 356 70 3 1 356 1 309 2.08e-150 438
MS.gene57082.t1 MTR_0103s0090 55.618 356 152 4 1 356 1 350 2.09e-132 382
MS.gene57082.t1 MTR_6g007760 55.732 314 134 3 1 314 1 309 6.71e-116 338
MS.gene57082.t1 MTR_0103s0090 57.034 263 109 2 94 356 1 259 1.50e-99 296
MS.gene57082.t1 MTR_1g014510 43.590 351 193 4 8 355 7 355 3.62e-93 285
MS.gene57082.t1 MTR_4g106720 40.571 350 201 5 9 356 8 352 2.15e-81 252
MS.gene57082.t1 MTR_5g034980 44.828 319 172 3 17 335 12 326 2.25e-79 247
MS.gene57082.t1 MTR_3g090550 42.029 345 189 6 12 356 6 339 5.88e-77 240
MS.gene57082.t1 MTR_5g034910 42.903 310 167 3 29 335 24 326 6.48e-74 233
MS.gene57082.t1 MTR_5g034990 39.697 330 189 5 28 356 30 350 1.28e-70 224
MS.gene57082.t1 MTR_5g034930 39.766 342 200 4 15 356 9 344 3.00e-69 221
MS.gene57082.t1 MTR_5g034970 42.056 321 169 4 15 335 10 313 1.28e-62 203
MS.gene57082.t1 MTR_2g007970 35.347 331 205 6 12 338 11 336 6.80e-51 174
MS.gene57082.t1 MTR_2g027030 35.152 330 205 6 9 334 8 332 1.42e-50 173
MS.gene57082.t1 MTR_5g034980 44.444 234 126 3 29 262 24 253 6.01e-50 169
MS.gene57082.t1 MTR_3g095460 32.047 337 226 3 13 348 6 340 8.93e-50 170
MS.gene57082.t1 MTR_2g007990 33.333 318 195 8 30 339 33 341 1.23e-49 171
MS.gene57082.t1 MTR_3g072560 34.824 313 178 6 37 339 43 339 2.17e-49 171
MS.gene57082.t1 MTR_3g095450 32.188 320 207 4 25 339 20 334 2.78e-48 167
MS.gene57082.t1 MTR_4g094362 31.563 339 222 6 13 346 15 348 4.87e-48 166
MS.gene57082.t1 MTR_0096s0100 29.688 320 215 5 37 354 43 354 5.34e-48 166
MS.gene57082.t1 MTR_8g041390 30.539 334 225 5 17 346 18 348 7.32e-47 164
MS.gene57082.t1 MTR_4g094340 32.471 348 224 6 13 354 10 352 8.29e-47 162
MS.gene57082.t1 MTR_4g094340 33.535 331 209 6 30 354 45 370 1.78e-46 162
MS.gene57082.t1 MTR_2g007960 30.303 363 240 6 1 355 1 358 9.76e-46 161
MS.gene57082.t1 MTR_3g012420 34.076 314 195 7 38 346 43 349 2.67e-45 160
MS.gene57082.t1 MTR_2g016710 29.483 329 222 5 30 355 26 347 3.00e-45 159
MS.gene57082.t1 MTR_1g030400 34.740 308 193 5 32 334 27 331 3.14e-45 159
MS.gene57082.t1 MTR_3g095420 28.916 332 228 3 13 339 8 336 3.36e-45 159
MS.gene57082.t1 MTR_1g038560 29.738 343 223 9 14 350 4 334 3.48e-45 158
MS.gene57082.t1 MTR_7g111830 32.923 325 203 6 32 351 27 341 5.82e-45 158
MS.gene57082.t1 MTR_4g094360 30.028 363 220 6 13 356 15 362 1.50e-44 158
MS.gene57082.t1 MTR_1g068630 34.740 308 190 6 30 334 33 332 2.23e-44 156
MS.gene57082.t1 MTR_1g074120 31.143 350 229 8 7 353 11 351 6.25e-44 155
MS.gene57082.t1 MTR_1g074160 32.000 325 198 8 32 345 33 345 1.44e-43 154
MS.gene57082.t1 MTR_1g074020 33.762 311 184 9 37 340 38 333 1.52e-43 154
MS.gene57082.t1 MTR_1g030600 31.561 301 201 4 37 335 43 340 3.38e-43 154
MS.gene57082.t1 MTR_1g030580 32.087 321 202 5 37 353 41 349 3.79e-43 154
MS.gene57082.t1 MTR_8g092650 31.378 341 224 4 13 347 6 342 4.17e-43 153
MS.gene57082.t1 MTR_2g007260 33.742 326 201 6 16 334 22 339 5.06e-43 154
MS.gene57082.t1 MTR_3g072500 32.390 318 197 7 37 345 45 353 1.04e-42 153
MS.gene57082.t1 MTR_3g072530 31.746 315 201 6 38 346 40 346 3.14e-42 150
MS.gene57082.t1 MTR_6g036450 33.750 320 201 7 25 339 31 344 4.57e-42 150
MS.gene57082.t1 MTR_1g070175 28.655 342 231 5 5 345 9 338 1.17e-41 149
MS.gene57082.t1 MTR_4g094340 34.043 282 175 5 82 354 7 286 1.49e-41 147
MS.gene57082.t1 MTR_1g114210 30.945 307 203 7 30 334 29 328 1.96e-41 148
MS.gene57082.t1 MTR_2g102340 32.424 330 202 9 30 349 30 348 2.79e-41 148
MS.gene57082.t1 MTR_4g094360 31.677 322 182 6 59 356 8 315 2.78e-40 145
MS.gene57082.t1 MTR_1g073990 31.627 332 217 5 7 335 11 335 3.86e-40 145
MS.gene57082.t1 MTR_3g072500 33.984 256 156 4 97 345 1 250 8.48e-40 142
MS.gene57082.t1 MTR_4g094342 30.368 326 222 4 30 352 31 354 2.88e-39 143
MS.gene57082.t1 MTR_3g095440 31.153 321 209 5 25 339 20 334 3.20e-39 142
MS.gene57082.t1 MTR_1g051120 30.769 351 228 9 7 350 11 353 3.55e-39 142
MS.gene57082.t1 MTR_7g100050 32.792 308 198 6 30 334 31 332 1.03e-38 142
MS.gene57082.t1 MTR_1g074070 31.077 325 208 9 32 352 36 348 1.53e-37 138
MS.gene57082.t1 MTR_8g006010 32.907 313 200 5 32 340 30 336 2.38e-37 138
MS.gene57082.t1 MTR_2g065550 32.024 331 214 5 11 337 9 332 2.50e-37 138
MS.gene57082.t1 MTR_4g094352 31.437 334 212 8 12 334 11 338 7.22e-37 137
MS.gene57082.t1 MTR_1g023180 29.938 324 201 6 32 335 41 358 1.12e-35 134
MS.gene57082.t1 MTR_2g016710 29.123 285 194 4 30 313 26 303 3.58e-35 131
MS.gene57082.t1 MTR_6g081840 32.258 279 184 4 71 346 67 343 4.80e-35 132
MS.gene57082.t1 MTR_4g129650 30.284 317 208 6 26 337 21 329 1.12e-34 130
MS.gene57082.t1 MTR_3g112480 28.889 315 211 3 32 335 40 352 1.64e-34 131
MS.gene57082.t1 MTR_5g089390 29.452 292 191 5 46 334 48 327 6.90e-34 128
MS.gene57082.t1 MTR_4g094360 28.662 314 195 5 13 312 15 313 7.59e-34 127
MS.gene57082.t1 MTR_3g112480 29.682 283 185 3 64 335 18 297 1.39e-32 124
MS.gene57082.t1 MTR_8g006120 31.138 334 219 6 11 339 9 336 1.62e-32 125
MS.gene57082.t1 MTR_8g006090 31.285 358 234 7 4 354 2 354 3.24e-32 124
MS.gene57082.t1 MTR_8g092650 30.290 241 161 2 112 347 26 264 4.42e-32 121
MS.gene57082.t1 MTR_3g019050 31.699 306 192 6 36 334 42 337 1.61e-31 122
MS.gene57082.t1 MTR_5g021160 29.801 302 200 5 38 334 33 327 3.89e-31 121
MS.gene57082.t1 MTR_5g068790 28.758 306 203 4 36 334 42 339 4.23e-30 119
MS.gene57082.t1 MTR_3g072520 28.882 322 221 6 34 351 31 348 6.75e-30 118
MS.gene57082.t1 MTR_5g069040 29.085 306 204 4 36 334 42 341 7.34e-30 118
MS.gene57082.t1 MTR_1g052205 30.472 233 145 5 126 354 13 232 9.64e-30 115
MS.gene57082.t1 MTR_3g095440 30.196 255 166 5 13 260 6 255 4.04e-29 113
MS.gene57082.t1 MTR_5g012650 32.595 316 179 11 55 354 51 348 1.03e-28 114
MS.gene57082.t1 MTR_5g025340 28.451 355 225 9 23 354 13 361 1.34e-28 114
MS.gene57082.t1 MTR_5g021160 31.405 242 157 3 97 334 8 244 2.06e-28 112
MS.gene57082.t1 MTR_1g014790 44.628 121 66 1 91 211 41 160 2.41e-28 109
MS.gene57082.t1 MTR_4g129650 31.556 225 148 2 110 334 1 219 2.80e-28 111
MS.gene57082.t1 MTR_5g025400 27.747 364 222 11 23 356 14 366 3.24e-28 114
MS.gene57082.t1 MTR_8g006090 31.984 247 161 3 112 354 31 274 4.63e-28 111
MS.gene57082.t1 MTR_8g006050 30.769 325 202 8 22 342 4 309 2.88e-27 110
MS.gene57082.t1 MTR_5g025290 26.627 338 212 9 25 335 44 372 5.31e-27 110
MS.gene57082.t1 MTR_5g025290 26.627 338 212 9 25 335 16 344 5.58e-27 110
MS.gene57082.t1 MTR_5g025370 27.035 344 220 9 32 354 30 363 1.77e-26 108
MS.gene57082.t1 MTR_1g074160 31.356 236 143 7 32 260 33 256 3.52e-26 105
MS.gene57082.t1 MTR_5g025330 27.900 319 210 7 32 335 29 342 6.74e-25 106
MS.gene57082.t1 MTR_4g094340 31.799 239 155 5 30 265 27 260 1.27e-24 101
MS.gene57082.t1 MTR_4g100840 27.469 324 216 9 38 354 40 351 2.35e-24 102
MS.gene57082.t1 MTR_4g094340 31.799 239 155 5 30 265 45 278 2.57e-24 101
MS.gene57082.t1 MTR_8g072350 25.749 334 220 8 25 335 14 342 3.67e-24 102
MS.gene57082.t1 MTR_3g072500 29.614 233 148 6 37 262 45 268 3.15e-22 95.1
MS.gene57082.t1 MTR_3g112480 28.000 225 152 1 121 335 1 225 1.84e-21 92.8
MS.gene57082.t1 MTR_8g006090 28.846 312 214 5 4 312 2 308 7.39e-21 92.0
MS.gene57082.t1 MTR_2g102340 30.085 236 147 8 30 258 56 280 8.09e-21 92.0
MS.gene57082.t1 MTR_5g021160 29.358 218 142 5 38 250 33 243 2.92e-18 84.0
MS.gene57082.t1 MTR_3g072530 28.740 254 143 9 38 256 40 290 8.45e-18 83.2
MS.gene57082.t1 MTR_4g094340 34.426 183 112 5 30 209 45 222 1.32e-17 81.3
MS.gene57082.t1 MTR_1g051120 28.502 207 135 7 14 215 17 215 4.80e-16 76.6
MS.gene57082.t1 MTR_1g051120 28.931 159 110 2 7 164 11 167 1.02e-15 76.6
MS.gene57082.t1 MTR_3g072500 30.723 166 99 6 37 195 45 201 2.61e-15 74.7
MS.gene57082.t1 MTR_4g094342 31.646 158 94 4 30 175 31 186 5.23e-15 74.3
MS.gene57082.t1 MTR_8g006090 29.893 281 182 7 4 281 2 270 7.67e-14 71.6
MS.gene57082.t1 MTR_1g061900 64.151 53 13 1 140 192 46 92 1.59e-11 62.4
MS.gene57082.t1 MTR_4g094348 37.705 122 70 3 102 217 11 132 1.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57082.t1 AT3G28050 45.799 369 178 7 1 356 1 360 1.96e-103 309
MS.gene57082.t1 AT5G40240 45.748 341 177 4 10 346 17 353 1.42e-95 289
MS.gene57082.t1 AT5G40240 45.748 341 177 4 10 346 17 353 1.42e-95 289
MS.gene57082.t1 AT5G40240 45.748 341 177 4 10 346 31 367 4.15e-95 288
MS.gene57082.t1 AT5G40230 42.978 356 196 3 2 356 9 358 2.13e-92 281
MS.gene57082.t1 AT5G40210 39.883 341 183 4 17 356 17 336 2.53e-79 246
MS.gene57082.t1 AT4G15540 42.229 341 180 4 2 340 5 330 2.24e-76 239
MS.gene57082.t1 AT4G15540 42.229 341 180 4 2 340 5 330 2.24e-76 239
MS.gene57082.t1 AT3G28080 41.840 337 189 5 21 356 22 352 2.73e-70 224
MS.gene57082.t1 AT3G28100 41.284 327 185 5 29 354 30 350 2.44e-69 221
MS.gene57082.t1 AT3G28130 43.529 340 177 7 21 356 21 349 5.08e-69 220
MS.gene57082.t1 AT3G28070 41.284 327 184 5 29 354 33 352 7.25e-65 210
MS.gene57082.t1 AT3G28080 40.541 333 183 5 25 356 26 344 1.37e-63 206
MS.gene57082.t1 AT3G28070 40.892 269 140 5 93 354 4 260 1.67e-58 191
MS.gene57082.t1 AT3G28080 41.887 265 148 4 93 356 4 263 2.02e-58 190
MS.gene57082.t1 AT3G28080 41.887 265 148 4 93 356 4 263 2.02e-58 190
MS.gene57082.t1 AT3G28080 41.887 265 148 4 93 356 4 263 2.02e-58 190
MS.gene57082.t1 AT3G28080 41.887 265 148 4 93 356 4 263 2.02e-58 190
MS.gene57082.t1 AT3G28130 45.122 246 126 4 93 334 6 246 2.02e-56 185
MS.gene57082.t1 AT3G28130 45.122 246 126 4 93 334 6 246 2.02e-56 185
MS.gene57082.t1 AT4G08300 33.333 360 219 9 9 356 6 356 3.65e-53 180
MS.gene57082.t1 AT1G21890 33.642 324 202 4 37 353 35 352 1.62e-52 179
MS.gene57082.t1 AT3G30340 32.012 328 214 4 30 352 28 351 2.22e-51 175
MS.gene57082.t1 AT3G28070 40.702 285 165 4 29 312 33 314 2.78e-51 173
MS.gene57082.t1 AT1G44800 33.333 306 190 5 37 337 35 331 1.67e-47 165
MS.gene57082.t1 AT3G28100 43.162 234 130 3 29 261 30 261 6.40e-47 160
MS.gene57082.t1 AT5G07050 33.654 312 183 6 38 335 43 344 1.23e-46 163
MS.gene57082.t1 AT1G70260 31.232 349 222 4 10 347 9 350 2.73e-46 162
MS.gene57082.t1 AT3G28130 43.443 244 129 4 21 260 21 259 1.74e-44 154
MS.gene57082.t1 AT2G39510 34.795 342 191 7 32 353 27 356 2.68e-44 156
MS.gene57082.t1 AT2G40900 32.372 312 196 5 37 345 35 334 1.44e-43 155
MS.gene57082.t1 AT5G13670 30.205 341 220 8 13 347 8 336 2.63e-43 154
MS.gene57082.t1 AT3G28080 38.889 234 131 5 127 356 1 226 2.96e-43 150
MS.gene57082.t1 AT1G21890 33.451 284 180 3 37 313 35 316 2.12e-42 151
MS.gene57082.t1 AT3G28070 36.596 235 130 5 127 354 1 223 4.50e-42 147
MS.gene57082.t1 AT2G37460 31.889 323 209 6 30 349 32 346 1.47e-41 149
MS.gene57082.t1 AT3G56620 32.441 299 186 6 37 331 35 321 1.72e-41 149
MS.gene57082.t1 AT3G28130 41.981 212 114 4 127 334 1 207 1.95e-41 145
MS.gene57082.t1 AT1G01070 30.154 325 218 6 14 334 16 335 2.37e-41 149
MS.gene57082.t1 AT4G28040 32.344 337 208 6 16 350 13 331 3.63e-41 148
MS.gene57082.t1 AT4G28040 32.344 337 208 6 16 350 13 331 3.63e-41 148
MS.gene57082.t1 AT4G28040 32.344 337 208 6 16 350 13 331 3.63e-41 148
MS.gene57082.t1 AT4G28040 32.344 337 208 6 16 350 13 331 3.63e-41 148
MS.gene57082.t1 AT4G28040 32.344 337 208 6 16 350 13 331 3.63e-41 148
MS.gene57082.t1 AT1G11450 29.167 336 228 7 13 345 15 343 1.61e-40 146
MS.gene57082.t1 AT5G64700 30.960 323 206 4 32 344 27 342 4.17e-40 145
MS.gene57082.t1 AT4G01430 27.941 340 230 8 14 345 9 341 4.58e-40 145
MS.gene57082.t1 AT1G60050 29.700 367 240 9 1 354 4 365 8.18e-40 145
MS.gene57082.t1 AT4G08290 30.275 327 213 6 34 353 33 351 8.64e-40 145
MS.gene57082.t1 AT1G09380 31.023 303 203 4 32 331 27 326 3.47e-39 143
MS.gene57082.t1 AT1G01070 31.522 276 182 4 61 334 18 288 6.49e-39 141
MS.gene57082.t1 AT1G11450 29.801 302 203 6 46 345 5 299 4.70e-38 138
MS.gene57082.t1 AT1G11460 28.615 325 224 5 13 334 15 334 6.47e-38 139
MS.gene57082.t1 AT3G28100 47.027 185 96 2 29 213 30 212 4.74e-37 134
MS.gene57082.t1 AT1G11450 29.530 298 201 6 50 345 2 292 7.62e-37 135
MS.gene57082.t1 AT1G43650 31.889 323 209 5 24 345 20 332 3.35e-36 134
MS.gene57082.t1 AT4G01440 28.205 312 210 7 36 340 32 336 8.72e-35 131
MS.gene57082.t1 AT1G68170 30.178 338 227 6 1 334 1 333 9.85e-35 131
MS.gene57082.t1 AT1G75500 28.939 311 210 4 32 335 39 345 1.61e-34 131
MS.gene57082.t1 AT1G75500 28.939 311 210 4 32 335 39 345 1.61e-34 131
MS.gene57082.t1 AT3G28130 46.154 195 97 3 21 212 21 210 2.31e-34 126
MS.gene57082.t1 AT1G68170 32.143 308 200 6 31 334 21 323 2.36e-34 130
MS.gene57082.t1 AT3G18200 31.959 291 181 5 61 343 84 365 2.58e-34 130
MS.gene57082.t1 AT1G25270 29.503 322 219 5 17 335 7 323 2.59e-34 129
MS.gene57082.t1 AT3G53210 29.766 299 205 4 38 335 35 329 3.88e-34 129
MS.gene57082.t1 AT3G28080 42.857 210 113 3 3 212 9 211 4.33e-34 128
MS.gene57082.t1 AT3G28080 43.529 85 45 1 272 356 217 298 1.97e-14 73.6
MS.gene57082.t1 AT4G30420 30.952 336 216 6 18 347 8 333 4.66e-34 129
MS.gene57082.t1 AT4G30420 30.952 336 216 6 18 347 18 343 5.01e-34 129
MS.gene57082.t1 AT1G11450 30.588 255 171 4 92 345 2 251 1.67e-32 122
MS.gene57082.t1 AT4G01430 27.931 290 195 7 30 312 26 308 4.03e-31 120
MS.gene57082.t1 AT3G30340 32.051 234 154 3 30 262 28 257 1.02e-30 118
MS.gene57082.t1 AT1G11450 27.063 303 212 6 13 312 15 311 3.12e-30 118
MS.gene57082.t1 AT3G53210 30.252 238 164 2 98 335 37 272 1.10e-29 116
MS.gene57082.t1 AT5G45370 26.875 320 216 6 32 349 39 342 3.03e-29 116
MS.gene57082.t1 AT5G47470 31.596 307 175 8 61 354 79 363 3.28e-29 116
MS.gene57082.t1 AT5G47470 31.596 307 175 8 61 354 107 391 4.29e-29 116
MS.gene57082.t1 AT3G18200 33.195 241 148 3 110 343 1 235 8.08e-29 112
MS.gene57082.t1 AT4G01440 27.113 284 196 6 36 315 32 308 1.38e-28 113
MS.gene57082.t1 AT5G45370 26.506 332 226 7 32 349 39 366 6.22e-28 112
MS.gene57082.t1 AT5G45370 26.506 332 226 7 32 349 39 366 6.22e-28 112
MS.gene57082.t1 AT5G47470 31.615 291 165 7 61 338 107 376 8.90e-28 112
MS.gene57082.t1 AT2G37450 32.400 250 154 5 102 342 4 247 1.72e-27 109
MS.gene57082.t1 AT2G37450 29.841 315 184 7 37 342 33 319 2.56e-27 110
MS.gene57082.t1 AT4G01440 28.017 232 159 3 113 340 1 228 4.85e-27 107
MS.gene57082.t1 AT4G01440 28.017 232 159 3 113 340 1 228 4.85e-27 107
MS.gene57082.t1 AT4G08290 31.034 232 145 6 34 258 33 256 8.65e-25 102
MS.gene57082.t1 AT5G64700 30.962 239 148 4 32 260 27 258 1.76e-24 101
MS.gene57082.t1 AT3G45870 26.214 309 212 6 32 329 31 334 5.73e-24 102
MS.gene57082.t1 AT4G01450 27.164 335 232 4 13 345 10 334 8.40e-24 101
MS.gene57082.t1 AT4G19185 24.625 333 225 7 25 335 25 353 2.20e-23 100
MS.gene57082.t1 AT4G01450 27.206 272 186 4 13 282 10 271 4.65e-23 98.6
MS.gene57082.t1 AT4G01440 29.694 229 150 6 36 260 32 253 6.19e-23 97.1
MS.gene57082.t1 AT3G28080 48.305 118 60 1 93 210 4 120 1.62e-22 94.7
MS.gene57082.t1 AT3G28080 43.529 85 45 1 272 356 128 209 9.09e-15 73.2
MS.gene57082.t1 AT4G19185 25.000 260 178 5 90 335 19 275 4.04e-22 95.9
MS.gene57082.t1 AT4G01430 27.404 208 143 3 142 345 1 204 7.44e-22 93.2
MS.gene57082.t1 AT5G45370 25.940 266 182 5 97 349 1 264 7.44e-22 94.4
MS.gene57082.t1 AT5G45370 25.940 266 182 5 97 349 1 264 7.44e-22 94.4
MS.gene57082.t1 AT4G24980 28.030 264 140 6 73 335 25 239 7.25e-21 91.3
MS.gene57082.t1 AT3G53210 31.551 187 123 4 38 223 35 217 1.33e-20 90.5
MS.gene57082.t1 AT4G01450 28.000 250 168 4 13 260 10 249 1.69e-20 90.1
MS.gene57082.t1 AT3G28060 35.461 141 81 3 173 312 23 154 4.04e-20 86.3
MS.gene57082.t1 AT1G43650 31.878 229 147 5 32 259 26 246 7.25e-20 88.6
MS.gene57082.t1 AT2G37450 30.531 226 142 5 126 342 61 280 2.50e-19 87.4
MS.gene57082.t1 AT4G16620 29.139 302 175 9 55 338 54 334 7.93e-19 87.0
MS.gene57082.t1 AT3G45870 24.658 292 204 6 32 312 31 317 2.96e-18 84.7
MS.gene57082.t1 AT4G16620 29.183 257 145 7 99 338 1 237 1.74e-17 81.6
MS.gene57082.t1 AT4G16620 29.183 257 145 7 99 338 1 237 1.74e-17 81.6
MS.gene57082.t1 AT4G01450 28.899 218 143 4 13 228 10 217 3.78e-17 80.5
MS.gene57082.t1 AT3G45870 24.590 244 170 4 95 329 21 259 7.04e-15 74.7
MS.gene57082.t1 AT5G45370 24.681 235 162 5 128 349 74 306 2.86e-14 73.2
MS.gene57082.t1 AT3G45870 24.783 230 158 5 32 250 31 256 7.79e-13 68.6
MS.gene57082.t1 AT3G28070 51.020 98 47 1 29 126 33 129 8.04e-12 64.7

Find 65 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCTGGGCAATACACTTAA+AGG 0.164042 6.2:+3531438 MS.gene57082:CDS
TCATGTTAGCTATCACTTTC+AGG 0.165357 6.2:+3529425 MS.gene57082:CDS
CAGATGTTCATCTCAGATTC+TGG 0.176104 6.2:+3529330 MS.gene57082:intron
AATTCAAGTGCTTGGAAAAT+AGG 0.233495 6.2:+3530922 MS.gene57082:CDS
AGTAGTAATGCTAAGGTAAT+TGG 0.253696 6.2:+3529958 MS.gene57082:CDS
ATATGCAAAAGTGTGCTTCT+TGG 0.274322 6.2:+3528616 MS.gene57082:CDS
TTGGTCTTTATGCTGTATTA+TGG 0.276154 6.2:+3531949 MS.gene57082:CDS
TGCTTCAGCAATTGCGAATC+TGG 0.291959 6.2:+3529387 MS.gene57082:CDS
AAGACTAAAGTTAGTTCATC+TGG 0.299799 6.2:-3530841 None:intergenic
TGCAAATTGTTATCTCTGTT+TGG 0.303819 6.2:+3531491 MS.gene57082:CDS
AAGACCAATTGAGATTATTA+TGG 0.308192 6.2:-3531934 None:intergenic
TGGTCTTTATGCTGTATTAT+GGG 0.328682 6.2:+3531950 MS.gene57082:CDS
AGTGTGCTTCTTGGAGCAAT+AGG 0.346723 6.2:+3528625 MS.gene57082:CDS
CAGTTCCAAATTCAAGTGCT+TGG 0.382606 6.2:+3530914 MS.gene57082:CDS
ATTGTTATCTCTGTTTGGTT+GGG 0.389139 6.2:+3531496 MS.gene57082:CDS
TCAAGTCTGTGGATTCAAGC+TGG 0.406376 6.2:+3530094 MS.gene57082:CDS
GCCTGGGCAATACACTTAAA+GGG 0.409579 6.2:+3531439 MS.gene57082:CDS
GATTCAAGCTGGGCCATTGC+TGG 0.410455 6.2:+3530105 MS.gene57082:CDS
TTCAAAGCAGCCACACTTCA+AGG 0.420349 6.2:+3528209 MS.gene57082:CDS
AATTGTTATCTCTGTTTGGT+TGG 0.421782 6.2:+3531495 MS.gene57082:CDS
AGATGTTCATCTCAGATTCT+GGG 0.460667 6.2:+3529331 MS.gene57082:intron
AGAGGAAGATGTTGGTAGCT+TGG 0.463078 6.2:+3531992 MS.gene57082:CDS
GGAGCCATAATAATCTCAAT+TGG 0.466604 6.2:+3531930 MS.gene57082:CDS
CAAAGCAACAGAAGAGATAG+AGG 0.466891 6.2:+3531974 MS.gene57082:CDS
AAGAAGATGGTCTTTGTACA+TGG 0.468732 6.2:+3528124 MS.gene57082:CDS
CGGCTCTAGCTTTGCAGAAG+AGG 0.468815 6.2:-3532038 None:intergenic
GTGTGCTTCTTGGAGCAATA+GGG 0.485757 6.2:+3528626 MS.gene57082:CDS
CTTCTGGTGAAAAGAGTGAC+AGG 0.503672 6.2:-3528290 None:intergenic
GAAGAGATAGAGGAAGATGT+TGG 0.505673 6.2:+3531984 MS.gene57082:CDS
CCCCTTTAAGTGTATTGCCC+AGG 0.506998 6.2:-3531440 None:intergenic
ACAGACTTGAGAAAGTCAAT+TGG 0.519975 6.2:-3530081 None:intergenic
GCAATTGCTGAAGCAAGTGT+TGG 0.523196 6.2:-3529379 None:intergenic
TGGTTGGGAGTTATATTCCT+TGG 0.523310 6.2:+3531511 MS.gene57082:CDS
CAAGTCTGTGGATTCAAGCT+GGG 0.528710 6.2:+3530095 MS.gene57082:CDS
GTGATACTCTTCATGTTGGA+AGG 0.531126 6.2:+3531533 MS.gene57082:CDS
CTTGGTGATACTCTTCATGT+TGG 0.540780 6.2:+3531529 MS.gene57082:CDS
AATTGACTTTCTCAAGTCTG+TGG 0.542290 6.2:+3530083 MS.gene57082:CDS
AGATATGATTGTGGCAGTAA+TGG 0.546852 6.2:-3530872 None:intergenic
ATAATGGAGAAACTGATTGA+AGG 0.548854 6.2:-3528595 None:intergenic
GGAAGCATAATATCAATAGC+AGG 0.554009 6.2:+3529979 MS.gene57082:CDS
GGTCTTTATGCTGTATTATG+GGG 0.556844 6.2:+3531951 MS.gene57082:CDS
AGTATAAGATGAATTCATGA+TGG 0.563670 6.2:-3530034 None:intergenic
GAGTAAAAGTAGTAATGCTA+AGG 0.571193 6.2:+3529951 MS.gene57082:CDS
AAGTCAATTGGTTGATGAAG+TGG 0.572248 6.2:-3530069 None:intergenic
TCATAGCATATAATCACAGC+AGG 0.577064 6.2:-3528158 None:intergenic
AGACTAAAGTTAGTTCATCT+GGG 0.577091 6.2:-3530840 None:intergenic
TCAAAGCAGCCACACTTCAA+GGG 0.585251 6.2:+3528210 MS.gene57082:CDS
ACAGAAACATGACAAGAAGA+TGG 0.589480 6.2:+3528111 None:intergenic
CCTGGGCAATACACTTAAAG+GGG 0.590396 6.2:+3531440 MS.gene57082:CDS
GCTAACATGAAAGTGAAAGC+AGG 0.596873 6.2:-3529412 None:intergenic
GTCTCTTACAGAAGAAACAA+TGG 0.598395 6.2:-3530965 None:intergenic
TACAAGTGTAGATATGATTG+TGG 0.602099 6.2:-3530881 None:intergenic
TGTCAGCAGAATACCAGCAA+TGG 0.614267 6.2:-3530118 None:intergenic
GATGTTCATCTCAGATTCTG+GGG 0.623409 6.2:+3529332 MS.gene57082:intron
TTTGTGTTGACTTTCTACAA+AGG 0.624165 6.2:+3530006 MS.gene57082:CDS
ATTGTTCATCCCTTGAAGTG+TGG 0.626287 6.2:-3528219 None:intergenic
ATGGAGAAACTGATTGAAGG+AGG 0.634896 6.2:-3528592 None:intergenic
TAGCATATAATCACAGCAGG+TGG 0.665624 6.2:-3528155 None:intergenic
AATTTGCAGTGGCACGAACG+AGG 0.666521 6.2:-3531476 None:intergenic
ATGCTATGAATGTATTGACA+TGG 0.692356 6.2:+3528172 MS.gene57082:CDS
TTCTGGTGAAAAGAGTGACA+GGG 0.706344 6.2:-3528289 None:intergenic
CAACATGAAGAGTATCACCA+AGG 0.716520 6.2:-3531528 None:intergenic
ACAGAGATAACAATTTGCAG+TGG 0.716735 6.2:-3531487 None:intergenic
CTGGGCAATACACTTAAAGG+GGG 0.717095 6.2:+3531441 MS.gene57082:CDS
AATTGGTTGATGAAGTGGTG+AGG 0.726144 6.2:-3530064 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACAAAAATATACATAAA+TGG - chr6.2:3531891-3531910 None:intergenic 10.0%
!! TATGGTTAATTAATATAATA+AGG + chr6.2:3531101-3531120 MS.gene57082:intron 10.0%
!!! ATATTTTGTAATTCTAATTA+CGG + chr6.2:3528450-3528469 MS.gene57082:intron 10.0%
!! ATATCTTGGTTTAATTATAA+TGG - chr6.2:3528698-3528717 None:intergenic 15.0%
!! ATTATAATTAAACCAAGATA+TGG + chr6.2:3528697-3528716 MS.gene57082:intron 15.0%
!!! ATATATTTTTGCTAAAATCT+CGG - chr6.2:3528434-3528453 None:intergenic 15.0%
!! CAAGTTACTATAATACTAAA+AGG - chr6.2:3529203-3529222 None:intergenic 20.0%
!! CTTTCAATTTAACAAAATCA+TGG - chr6.2:3528481-3528500 None:intergenic 20.0%
!! TTGAACTAAATAGTATATTG+CGG + chr6.2:3529676-3529695 MS.gene57082:intron 20.0%
!!! AGTTATTTTTTTCATTTCAC+AGG + chr6.2:3530798-3530817 MS.gene57082:intron 20.0%
!!! ATAAAATCATCCTGAAATTT+TGG - chr6.2:3529006-3529025 None:intergenic 20.0%
!!! CATTTTCTCAAAAATGTTAT+CGG + chr6.2:3529110-3529129 MS.gene57082:intron 20.0%
!!! CTTTTAGTATTATAGTAACT+TGG + chr6.2:3529201-3529220 MS.gene57082:intron 20.0%
! AAAAACGAACCAAATCTAAT+AGG + chr6.2:3531647-3531666 MS.gene57082:intron 25.0%
! AAAAGAGAATTAAGTGAAAG+TGG - chr6.2:3530447-3530466 None:intergenic 25.0%
! AAGACCAATTGAGATTATTA+TGG - chr6.2:3531937-3531956 None:intergenic 25.0%
! AGTAACAGTATTGTCAATTA+CGG + chr6.2:3529582-3529601 MS.gene57082:intron 25.0%
! AGTATAAGATGAATTCATGA+TGG - chr6.2:3530037-3530056 None:intergenic 25.0%
! ATAAATAATTGTGAACCTTC+TGG - chr6.2:3528309-3528328 None:intergenic 25.0%
! ATAACAGGAAAACAAATAAG+TGG - chr6.2:3529897-3529916 None:intergenic 25.0%
! ATATATATTAGAGCACGATT+CGG - chr6.2:3531232-3531251 None:intergenic 25.0%
! ATTTATCATACACCATATCT+TGG - chr6.2:3528712-3528731 None:intergenic 25.0%
! GCTATTGTTAACTGATAATT+AGG + chr6.2:3531610-3531629 MS.gene57082:intron 25.0%
! GTTAGTTAGTTATAGTTACA+GGG + chr6.2:3529241-3529260 MS.gene57082:intron 25.0%
! GTTATCATTGCAATTAAGAA+TGG + chr6.2:3529912-3529931 MS.gene57082:intron 25.0%
! TGTTAGTTAGTTATAGTTAC+AGG + chr6.2:3529240-3529259 MS.gene57082:intron 25.0%
! TTAAAGAGTCCTATTAGATT+TGG - chr6.2:3531659-3531678 None:intergenic 25.0%
! TTACTTGAATTTGTGACAAT+TGG + chr6.2:3530394-3530413 MS.gene57082:intron 25.0%
! TTAGTTAGTTATAGTTACAG+GGG + chr6.2:3529242-3529261 MS.gene57082:intron 25.0%
! TTCTTAATTGCAATGATAAC+AGG - chr6.2:3529912-3529931 None:intergenic 25.0%
! TTGAATATAACAACACATGT+CGG + chr6.2:3530323-3530342 MS.gene57082:intron 25.0%
! TTGGAACTTCAAAAAAATCA+TGG - chr6.2:3530623-3530642 None:intergenic 25.0%
! TTTAATTAAGCTGAATGAGA+AGG + chr6.2:3529824-3529843 MS.gene57082:intron 25.0%
!! AGAAACAATGACATAGATTT+TGG + chr6.2:3530243-3530262 MS.gene57082:intron 25.0%
!! AGTGATTTTAAACATACACT+TGG + chr6.2:3528499-3528518 MS.gene57082:intron 25.0%
!! GTGATTTTAAACATACACTT+GGG + chr6.2:3528500-3528519 MS.gene57082:intron 25.0%
!! TATGCATTTTGCAGTATAAT+TGG + chr6.2:3531909-3531928 MS.gene57082:intron 25.0%
!! TTAAATTTTCCCTTGATCTA+TGG - chr6.2:3529809-3529828 None:intergenic 25.0%
!! TTCACTATGGTATATTTTAC+AGG + chr6.2:3530158-3530177 MS.gene57082:CDS 25.0%
!! TTTCTTAATTTTCGTATTGG+TGG + chr6.2:3530418-3530437 MS.gene57082:intron 25.0%
!!! ATGATTTGTGTTTCATGTTT+TGG + chr6.2:3529287-3529306 MS.gene57082:intron 25.0%
!!! GATATTTTCAGTTTGGTTTT+TGG - chr6.2:3531687-3531706 None:intergenic 25.0%
!!! GTTTTTTCTAATCCTTGAAT+CGG + chr6.2:3528851-3528870 MS.gene57082:intron 25.0%
!!! TGATTTGTGTTTCATGTTTT+GGG + chr6.2:3529288-3529307 MS.gene57082:intron 25.0%
!!! TGTTTTGTTTAGTACATGTT+CGG + chr6.2:3528374-3528393 MS.gene57082:intron 25.0%
AAATATACGCTTAGAAATCG+TGG + chr6.2:3531279-3531298 MS.gene57082:intron 30.0%
AAGACTAAAGTTAGTTCATC+TGG - chr6.2:3530844-3530863 None:intergenic 30.0%
AATTCAAGTGCTTGGAAAAT+AGG + chr6.2:3530922-3530941 MS.gene57082:CDS 30.0%
AATTGTTATCTCTGTTTGGT+TGG + chr6.2:3531495-3531514 MS.gene57082:CDS 30.0%
AGACTAAAGTTAGTTCATCT+GGG - chr6.2:3530843-3530862 None:intergenic 30.0%
AGTAGTAATGCTAAGGTAAT+TGG + chr6.2:3529958-3529977 MS.gene57082:CDS 30.0%
ATTGTTATCTCTGTTTGGTT+GGG + chr6.2:3531496-3531515 MS.gene57082:CDS 30.0%
CTTGTTAGTATGTGAAAAGT+GGG + chr6.2:3529506-3529525 MS.gene57082:intron 30.0%
GAGTAAAAGTAGTAATGCTA+AGG + chr6.2:3529951-3529970 MS.gene57082:CDS 30.0%
GTATATTTGAACTCAAAACG+TGG - chr6.2:3531267-3531286 None:intergenic 30.0%
GTCAAATATCAGCTATATAG+CGG - chr6.2:3529741-3529760 None:intergenic 30.0%
TACAAGTGTAGATATGATTG+TGG - chr6.2:3530884-3530903 None:intergenic 30.0%
TGCAAATTGTTATCTCTGTT+TGG + chr6.2:3531491-3531510 MS.gene57082:CDS 30.0%
TGGTCTTTATGCTGTATTAT+GGG + chr6.2:3531950-3531969 MS.gene57082:CDS 30.0%
TGGTGTATGATAAATCACTA+TGG + chr6.2:3528717-3528736 MS.gene57082:intron 30.0%
TGTTAACTATGTTCAGCATA+TGG + chr6.2:3531083-3531102 MS.gene57082:intron 30.0%
TTCAATGTAATCACAAGTGT+CGG - chr6.2:3529084-3529103 None:intergenic 30.0%
TTTATACTTCACACCAAACT+TGG + chr6.2:3529863-3529882 MS.gene57082:intron 30.0%
! AAGCACACTTTTGCATATAA+TGG - chr6.2:3528614-3528633 None:intergenic 30.0%
! ACTTGTTAGTATGTGAAAAG+TGG + chr6.2:3529505-3529524 MS.gene57082:intron 30.0%
! ATAATGGAGAAACTGATTGA+AGG - chr6.2:3528598-3528617 None:intergenic 30.0%
! ATGCTATGAATGTATTGACA+TGG + chr6.2:3528172-3528191 MS.gene57082:CDS 30.0%
! ATTTTCCAAGCACTTGAATT+TGG - chr6.2:3530922-3530941 None:intergenic 30.0%
! CAGAAAAAAGTACAGTTTCA+GGG - chr6.2:3528966-3528985 None:intergenic 30.0%
! GGCTTTCTTAATTTTCGTAT+TGG + chr6.2:3530415-3530434 MS.gene57082:intron 30.0%
! TCAGAAAAAAGTACAGTTTC+AGG - chr6.2:3528967-3528986 None:intergenic 30.0%
! TCTATGGACTAACATCATTA+TGG - chr6.2:3529793-3529812 None:intergenic 30.0%
! TTGGTCTTTATGCTGTATTA+TGG + chr6.2:3531949-3531968 MS.gene57082:CDS 30.0%
!! CTAAGATATCTCTAGGATTT+AGG + chr6.2:3528829-3528848 MS.gene57082:intron 30.0%
!! TATTTTTGCTAAAATCTCGG+TGG - chr6.2:3528431-3528450 None:intergenic 30.0%
!! TTTGTGTTGACTTTCTACAA+AGG + chr6.2:3530006-3530025 MS.gene57082:CDS 30.0%
!!! ACTATTTTCTGGTTTCACTA+TGG + chr6.2:3530145-3530164 MS.gene57082:CDS 30.0%
!!! TTCATGTTTTGGGATTGTAT+GGG + chr6.2:3529298-3529317 MS.gene57082:intron 30.0%
!!! TTTCATGTTTTGGGATTGTA+TGG + chr6.2:3529297-3529316 MS.gene57082:intron 30.0%
AAGAAGATGGTCTTTGTACA+TGG + chr6.2:3528124-3528143 MS.gene57082:CDS 35.0%
ACAGACTTGAGAAAGTCAAT+TGG - chr6.2:3530084-3530103 None:intergenic 35.0%
ACAGAGATAACAATTTGCAG+TGG - chr6.2:3531490-3531509 None:intergenic 35.0%
ACCAAACTCTCCAAAATTTC+AGG + chr6.2:3528993-3529012 MS.gene57082:intron 35.0%
AGATATGATTGTGGCAGTAA+TGG - chr6.2:3530875-3530894 None:intergenic 35.0%
AGATGTTCATCTCAGATTCT+GGG + chr6.2:3529331-3529350 MS.gene57082:intron 35.0%
ATGCAAACATACACAGATAC+TGG - chr6.2:3530569-3530588 None:intergenic 35.0%
CCAATTGTGTGTCAAATATC+CGG - chr6.2:3528805-3528824 None:intergenic 35.0%
CTTCAGATATAAGATGTGTC+TGG - chr6.2:3530358-3530377 None:intergenic 35.0%
GAGTAAATGTGTGTTTCGAT+TGG - chr6.2:3530700-3530719 None:intergenic 35.0%
GATGTTAGTCCATAGATCAA+GGG + chr6.2:3529797-3529816 MS.gene57082:intron 35.0%
GGAGCCATAATAATCTCAAT+TGG + chr6.2:3531930-3531949 MS.gene57082:CDS 35.0%
GGTCTTTATGCTGTATTATG+GGG + chr6.2:3531951-3531970 MS.gene57082:CDS 35.0%
GTCTCTTACAGAAGAAACAA+TGG - chr6.2:3530968-3530987 None:intergenic 35.0%
GTGGTCGATGTTCAAAATTA+TGG + chr6.2:3531298-3531317 MS.gene57082:intron 35.0%
GTTCAAATTCTGCTATGCAA+CGG + chr6.2:3529625-3529644 MS.gene57082:intron 35.0%
TCAACCTCGTGTGAAAAATT+TGG - chr6.2:3528888-3528907 None:intergenic 35.0%
TCATAGCATATAATCACAGC+AGG - chr6.2:3528161-3528180 None:intergenic 35.0%
TCATGTTAGCTATCACTTTC+AGG + chr6.2:3529425-3529444 MS.gene57082:CDS 35.0%
TCGTGGTTAATTGTGTTTAG+TGG - chr6.2:3531147-3531166 None:intergenic 35.0%
TCTGTGTATGTTTGCATACA+CGG + chr6.2:3530572-3530591 MS.gene57082:intron 35.0%
TGAAAATATCCGAACTGTGA+TGG + chr6.2:3531697-3531716 MS.gene57082:intron 35.0%
TGACAAAATCATGTGTACCT+TGG - chr6.2:3530668-3530687 None:intergenic 35.0%
TGATAACACTTTCGTTTCCA+GGG + chr6.2:3531382-3531401 MS.gene57082:intron 35.0%
TGATGTTAGTCCATAGATCA+AGG + chr6.2:3529796-3529815 MS.gene57082:intron 35.0%
TTAACTGAACCGAAATGCTT+CGG + chr6.2:3531733-3531752 MS.gene57082:intron 35.0%
TTACTTAGTAGGAAAAGGCT+TGG + chr6.2:3528765-3528784 MS.gene57082:intron 35.0%
! AAGCCTTTTCCTACTAAGTA+AGG - chr6.2:3528766-3528785 None:intergenic 35.0%
! AATTGACTTTCTCAAGTCTG+TGG + chr6.2:3530083-3530102 MS.gene57082:CDS 35.0%
! ACATCCAAATTTTTCACACG+AGG + chr6.2:3528881-3528900 MS.gene57082:intron 35.0%
! ATATGCAAAAGTGTGCTTCT+TGG + chr6.2:3528616-3528635 MS.gene57082:CDS 35.0%
! ATGAACTGTCAGTCACATTT+TGG + chr6.2:3531764-3531783 MS.gene57082:intron 35.0%
! CAGTTCGGATATTTTCAGTT+TGG - chr6.2:3531694-3531713 None:intergenic 35.0%
! CTTTTCCTACTAAGTAAGGT+CGG - chr6.2:3528762-3528781 None:intergenic 35.0%
! GCTGACAATTGACTATTTTC+TGG + chr6.2:3530134-3530153 MS.gene57082:CDS 35.0%
! GGAAGCATAATATCAATAGC+AGG + chr6.2:3529979-3529998 MS.gene57082:CDS 35.0%
! GTTGATGAAGTTCAAAATCG+TGG - chr6.2:3531164-3531183 None:intergenic 35.0%
! TTGATAACACTTTCGTTTCC+AGG + chr6.2:3531381-3531400 MS.gene57082:intron 35.0%
! TTTCGTTTCCAGGGAATTTT+CGG + chr6.2:3531391-3531410 MS.gene57082:intron 35.0%
!! AAGTCAATTGGTTGATGAAG+TGG - chr6.2:3530072-3530091 None:intergenic 35.0%
!! GGAATTTTCGGGAAGTTAAT+CGG + chr6.2:3531403-3531422 MS.gene57082:CDS 35.0%
!! TCCTGAAATTTTGGAGAGTT+TGG - chr6.2:3528997-3529016 None:intergenic 35.0%
!!! GGTTAACTGTTTTGAGTTGA+TGG + chr6.2:3531319-3531338 MS.gene57082:intron 35.0%
AAGAACCTGAGTTCGATTGT+TGG - chr6.2:3528933-3528952 None:intergenic 40.0%
ACTCTTCATGTTGGAAGGTA+TGG + chr6.2:3531538-3531557 MS.gene57082:intron 40.0%
AGTGGACAATAGACCAAGTT+TGG - chr6.2:3529879-3529898 None:intergenic 40.0%
ATCTGAACACGTGAAAGTAG+TGG - chr6.2:3531186-3531205 None:intergenic 40.0%
ATGGAGAAACTGATTGAAGG+AGG - chr6.2:3528595-3528614 None:intergenic 40.0%
ATTGTGTGTCAAATATCCGG+TGG - chr6.2:3528802-3528821 None:intergenic 40.0%
ATTGTTCATCCCTTGAAGTG+TGG - chr6.2:3528222-3528241 None:intergenic 40.0%
CAAAGCAACAGAAGAGATAG+AGG + chr6.2:3531974-3531993 MS.gene57082:CDS 40.0%
CAGATGTTCATCTCAGATTC+TGG + chr6.2:3529330-3529349 MS.gene57082:intron 40.0%
CAGTTCCAAATTCAAGTGCT+TGG + chr6.2:3530914-3530933 MS.gene57082:CDS 40.0%
CCGGATATTTGACACACAAT+TGG + chr6.2:3528802-3528821 MS.gene57082:intron 40.0%
CGACCTTACTTAGTAGGAAA+AGG + chr6.2:3528760-3528779 MS.gene57082:intron 40.0%
CTTTAGCAAAAGCTGCACTT+TGG - chr6.2:3530642-3530661 None:intergenic 40.0%
GAAGAGATAGAGGAAGATGT+TGG + chr6.2:3531984-3532003 MS.gene57082:CDS 40.0%
GATGTTCATCTCAGATTCTG+GGG + chr6.2:3529332-3529351 MS.gene57082:intron 40.0%
GCTAACATGAAAGTGAAAGC+AGG - chr6.2:3529415-3529434 None:intergenic 40.0%
GGTTGAACTGCCTTCTAAAT+AGG + chr6.2:3528902-3528921 MS.gene57082:intron 40.0%
GTATTGTCAATTACGGATCG+CGG + chr6.2:3529589-3529608 MS.gene57082:intron 40.0%
GTGATACTCTTCATGTTGGA+AGG + chr6.2:3531533-3531552 MS.gene57082:CDS 40.0%
GTTGGAATCGCCTATTTAGA+AGG - chr6.2:3528915-3528934 None:intergenic 40.0%
TAGCATATAATCACAGCAGG+TGG - chr6.2:3528158-3528177 None:intergenic 40.0%
TGGCATGCTAAGATATCTCT+AGG + chr6.2:3528822-3528841 MS.gene57082:intron 40.0%
TGGTTGGGAGTTATATTCCT+TGG + chr6.2:3531511-3531530 MS.gene57082:CDS 40.0%
TGTATGTTTGCATACACGGT+TGG + chr6.2:3530576-3530595 MS.gene57082:intron 40.0%
TTAACTTCCCGAAAATTCCC+TGG - chr6.2:3531402-3531421 None:intergenic 40.0%
TTCTGGTGAAAAGAGTGACA+GGG - chr6.2:3528292-3528311 None:intergenic 40.0%
! AGCTTTTGCTAAAGTCACCA+AGG + chr6.2:3530648-3530667 MS.gene57082:intron 40.0%
! ATATTAGAGCACGATTCGGA+TGG - chr6.2:3531228-3531247 None:intergenic 40.0%
! CGGCAATATAGTTTTTGCCT+GGG + chr6.2:3531423-3531442 MS.gene57082:CDS 40.0%
! CTTGGTGATACTCTTCATGT+TGG + chr6.2:3531529-3531548 MS.gene57082:CDS 40.0%
! GTACTGACACTTCTGATTGA+AGG + chr6.2:3529039-3529058 MS.gene57082:intron 40.0%
! TCGGCAATATAGTTTTTGCC+TGG + chr6.2:3531422-3531441 MS.gene57082:CDS 40.0%
! TGAACTGAACCGAAGCATTT+CGG - chr6.2:3531745-3531764 None:intergenic 40.0%
! TTCGTTTCCAGGGAATTTTC+GGG + chr6.2:3531392-3531411 MS.gene57082:intron 40.0%
!! AATTGGTTGATGAAGTGGTG+AGG - chr6.2:3530067-3530086 None:intergenic 40.0%
!! AGAGGTGCATTTTCAGTAGA+TGG - chr6.2:3532023-3532042 None:intergenic 40.0%
!! CAACATGAAGAGTATCACCA+AGG - chr6.2:3531531-3531550 None:intergenic 40.0%
!! CAGAAGTGTCAGTACAACAT+AGG - chr6.2:3529034-3529053 None:intergenic 40.0%
!! GTTCGGATTGATAGTGAGTT+TGG + chr6.2:3528391-3528410 MS.gene57082:intron 40.0%
AAAGTGTGTGAGTGTGACTG+TGG - chr6.2:3529554-3529573 None:intergenic 45.0%
ACTAAGTAAGGTCGGCTACA+TGG - chr6.2:3528754-3528773 None:intergenic 45.0%
AGGCCTTAACCTATGAAGCA+CGG - chr6.2:3529183-3529202 None:intergenic 45.0%
AGTACAGTTTCAGGGAACTC+AGG - chr6.2:3528958-3528977 None:intergenic 45.0%
AGTGTGCTTCTTGGAGCAAT+AGG + chr6.2:3528625-3528644 MS.gene57082:CDS 45.0%
CAAGTCTGTGGATTCAAGCT+GGG + chr6.2:3530095-3530114 MS.gene57082:CDS 45.0%
CCTGGGCAATACACTTAAAG+GGG + chr6.2:3531440-3531459 MS.gene57082:CDS 45.0%
CGATTCCAACAATCGAACTC+AGG + chr6.2:3528925-3528944 MS.gene57082:intron 45.0%
CTGGGCAATACACTTAAAGG+GGG + chr6.2:3531441-3531460 MS.gene57082:CDS 45.0%
CTTCTGGTGAAAAGAGTGAC+AGG - chr6.2:3528293-3528312 None:intergenic 45.0%
GAGATGAACATCTGCAGAAC+AGG - chr6.2:3529324-3529343 None:intergenic 45.0%
GCAATTGCTGAAGCAAGTGT+TGG - chr6.2:3529382-3529401 None:intergenic 45.0%
GCCTGGGCAATACACTTAAA+GGG + chr6.2:3531439-3531458 MS.gene57082:CDS 45.0%
GTGAGCTATCCATCACAGTT+CGG - chr6.2:3531709-3531728 None:intergenic 45.0%
GTGTGCTTCTTGGAGCAATA+GGG + chr6.2:3528626-3528645 MS.gene57082:CDS 45.0%
TCAAAGCAGCCACACTTCAA+GGG + chr6.2:3528210-3528229 MS.gene57082:CDS 45.0%
TCAAGTCTGTGGATTCAAGC+TGG + chr6.2:3530094-3530113 MS.gene57082:CDS 45.0%
TGCCTGGGCAATACACTTAA+AGG + chr6.2:3531438-3531457 MS.gene57082:CDS 45.0%
TGCTTCAGCAATTGCGAATC+TGG + chr6.2:3529387-3529406 MS.gene57082:CDS 45.0%
TGTAGCCGACCTTACTTAGT+AGG + chr6.2:3528754-3528773 MS.gene57082:intron 45.0%
TGTCAGCAGAATACCAGCAA+TGG - chr6.2:3530121-3530140 None:intergenic 45.0%
TGTCCGTGCTTCATAGGTTA+AGG + chr6.2:3529177-3529196 MS.gene57082:intron 45.0%
TTCAAAGCAGCCACACTTCA+AGG + chr6.2:3528209-3528228 MS.gene57082:CDS 45.0%
! AGCACGATTCGGATGGTTAA+TGG - chr6.2:3531221-3531240 None:intergenic 45.0%
! CTGTCACTCTTTTCACCAGA+AGG + chr6.2:3528291-3528310 MS.gene57082:CDS 45.0%
! GGTGCTATAGCGTCACTATT+TGG + chr6.2:3529646-3529665 MS.gene57082:intron 45.0%
! GTAGGAAAAGGCTTGGTTGT+TGG + chr6.2:3528772-3528791 MS.gene57082:intron 45.0%
!! AGAGGAAGATGTTGGTAGCT+TGG + chr6.2:3531992-3532011 MS.gene57082:CDS 45.0%
!! CTGTCAGTCACATTTTGGTG+CGG + chr6.2:3531769-3531788 MS.gene57082:intron 45.0%
!! CTTGGTTGTTGGTAATCCAC+CGG + chr6.2:3528783-3528802 MS.gene57082:intron 45.0%
!! GTAATCACAAGTGTCGGTGT+CGG - chr6.2:3529078-3529097 None:intergenic 45.0%
AATTTGCAGTGGCACGAACG+AGG - chr6.2:3531479-3531498 None:intergenic 50.0%
ATGAAGCACGGACACAGACA+CGG - chr6.2:3529171-3529190 None:intergenic 50.0%
CCCCTTTAAGTGTATTGCCC+AGG - chr6.2:3531443-3531462 None:intergenic 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG + chr6.2:3529171-3529190 MS.gene57082:intron 50.0%
TTACGGATCGCGGAAACTAG+AGG + chr6.2:3529599-3529618 MS.gene57082:intron 50.0%
!! GATGTCTCACTGCCGATTCA+AGG - chr6.2:3528866-3528885 None:intergenic 50.0%
!! TATCGGTGTCAACGTGTCTG+TGG + chr6.2:3529127-3529146 MS.gene57082:intron 50.0%
GATTCAAGCTGGGCCATTGC+TGG + chr6.2:3530105-3530124 MS.gene57082:CDS 55.0%
GTCTGTGGCAGTGTCATGTC+TGG + chr6.2:3529142-3529161 MS.gene57082:intron 55.0%
GTGTGTGAGTGTGACTGTGG+TGG - chr6.2:3529551-3529570 None:intergenic 55.0%
!! CAAGTGTCGGTGTCGGACAC+TGG - chr6.2:3529071-3529090 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 3528119 3532055 3528119 ID=MS.gene57082
chr6.2 mRNA 3528119 3532055 3528119 ID=MS.gene57082.t1;Parent=MS.gene57082
chr6.2 exon 3528119 3528312 3528119 ID=MS.gene57082.t1.exon1;Parent=MS.gene57082.t1
chr6.2 CDS 3528119 3528312 3528119 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3528579 3528647 3528579 ID=MS.gene57082.t1.exon2;Parent=MS.gene57082.t1
chr6.2 CDS 3528579 3528647 3528579 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3529333 3529446 3529333 ID=MS.gene57082.t1.exon3;Parent=MS.gene57082.t1
chr6.2 CDS 3529333 3529446 3529333 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3529930 3530179 3529930 ID=MS.gene57082.t1.exon4;Parent=MS.gene57082.t1
chr6.2 CDS 3529930 3530179 3529930 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3530820 3530978 3530820 ID=MS.gene57082.t1.exon5;Parent=MS.gene57082.t1
chr6.2 CDS 3530820 3530978 3530820 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3531403 3531554 3531403 ID=MS.gene57082.t1.exon6;Parent=MS.gene57082.t1
chr6.2 CDS 3531403 3531554 3531403 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
chr6.2 exon 3531923 3532055 3531923 ID=MS.gene57082.t1.exon7;Parent=MS.gene57082.t1
chr6.2 CDS 3531923 3532055 3531923 ID=cds.MS.gene57082.t1;Parent=MS.gene57082.t1
Gene Sequence

>MS.gene57082

ATGACAAGAAGATGGTCTTTGTACATGGATTTTCTGCCACCTGCTGTGATTATATGCTATGAATGTATTGACATGGCTTTGCTCACTTTGTTCAAAGCAGCCACACTTCAAGGGATGAACAATCATGTCTTTATTGCTTATGCTTATGCTGTTGATACTTCTGTTATTCTCCCTGTCACTCTTTTCACCAGAAGGTTCACAATTATTTATTAATTTATTTCAATATCATAAACATATGTTACATAATTTAGTGCATGTTTTGTTTAGTACATGTTCGGATTGATAGTGAGTTTGGCAGAATCATAGTTTCCACCGAGATTTTAGCAAAAATATATTTTGTAATTCTAATTACGGTGTTACCATGATTTTGTTAAATTGAAAGTGATTTTAAACATACACTTGGGACTTATATTTCATTTGATTAATTTATTCATGTTTTTATTTTCATGTCTTTTTGCAGATCAAGAGCTGTTCCTCCTTCAATCAGTTTCTCCATTATATGCAAAAGTGTGCTTCTTGGAGCAATAGGGTAAGTACAAAATTGCATTATACTTTACATTGATAGTTGATTGTTATCCATTATAATTAAACCAAGATATGGTGTATGATAAATCACTATGGCGTAATTTGATCCATGTAGCCGACCTTACTTAGTAGGAAAAGGCTTGGTTGTTGGTAATCCACCGGATATTTGACACACAATTGGCATGCTAAGATATCTCTAGGATTTAGGTTTTTTCTAATCCTTGAATCGGCAGTGAGACATCCAAATTTTTCACACGAGGTTGAACTGCCTTCTAAATAGGCGATTCCAACAATCGAACTCAGGTTCTTTTCCTGAGTTCCCTGAAACTGTACTTTTTTCTGATATGTTACCAAACTCTCCAAAATTTCAGGATGATTTTATTAAAGCCTATGTTGTACTGACACTTCTGATTGAAGGCGTGTTCCAGTGTCCGACACCGACACTTGTGATTACATTGAATTATGTCATTTTCTCAAAAATGTTATCGGTGTCAACGTGTCTGTGGCAGTGTCATGTCTGGTGTCCGTGTCTGTGTCCGTGCTTCATAGGTTAAGGCCTTTTAGTATTATAGTAACTTGGTTATATCTAGTCTTGATGTTAGTTAGTTATAGTTACAGGGGTTTCATTAATTTTATGCTTCTGATGATTTGTGTTTCATGTTTTGGGATTGTATGGGCCTGTTCTGCAGATGTTCATCTCAGATTCTGGGGTATATTAGTATTAATTCAAGTTCTCCAACACTTGCTTCAGCAATTGCGAATCTGGTACCTGCTTTCACTTTCATGTTAGCTATCACTTTCAGGTTTGCATTACTTGTCTTGCACTCAATGAAATTTCTTAGAAACAACGATAGACTTGATACTTGTTAGTATGTGAAAAGTGGGCATGACTCATCTACAAACTCCACCACAGTCACACTCACACACTTTAACACATGAGTAACAGTATTGTCAATTACGGATCGCGGAAACTAGAGGTTTGTTCAAATTCTGCTATGCAACGGTGCTATAGCGTCACTATTTGGCAATAATTTGAACTAAATAGTATATTGCGGAACAATAGCGATTTGTTCAAATTTCGTTATACTAAACTGCCGCTATATAGCTGATATTTGACACTATATAGTTAAAATTTGAACTAATGCACCATAATGATGTTAGTCCATAGATCAAGGGAAAATTTAATTAAGCTGAATGAGAAGGAAAGTTTTAAACTGCATTTATACTTCACACCAAACTTGGTCTATTGTCCACTTATTTGTTTTCCTGTTATCATTGCAATTAAGAATGGAAAAGTTAGCTGCAAAGAGTAAAAGTAGTAATGCTAAGGTAATTGGAAGCATAATATCAATAGCAGGTGCTTTTGTGTTGACTTTCTACAAAGGACAATCCATCATGAATTCATCTTATACTCATCATTCCTCACCACTTCATCAACCAATTGACTTTCTCAAGTCTGTGGATTCAAGCTGGGCCATTGCTGGTATTCTGCTGACAATTGACTATTTTCTGGTTTCACTATGGTATATTTTACAGGTACGATTACTATTATGCAAAATGATAGATATTTTTATACTTTTAAAGCTAAAATGCAAGTTAAGAAACAATGACATAGATTTTGGACACAATGCTGACACTGACACATAGACATCAATGATAATTTGAGAAAGCATAACTGATTGAATATAACAACACATGTCGGTATCGAACACCAGACACATCTTATATCTGAAGTGTGCTACATAGCTATTTACTTGAATTTGTGACAATTGGCTTTCTTAATTTTCGTATTGGTGGTTGCCACTTTCACTTAATTCTCTTTTCAATAATACTTGTAAAAGTTCTCTAATTCATTCTTTCACTTGAATTTCACTCAATAACAGATAAGTATGTTTGAAAGTGTTTATTATGAGAAAGTGTTTCCAGTATCTGTGTATGTTTGCATACACGGTTGGTTTGACAAAATCACAATGATACCATGATTTTTTTGAAGTTCCAAAGTGCAGCTTTTGCTAAAGTCACCAAGGTACACATGATTTTGTCAAACTCTCTGCCAATCGAAACACACATTTACTCTTCAATAAAATATGCTGCTTGTTTCTTCTTTTCTTGTTATTTGATGAGAGAATAAAAAGTTTAATATTAAAATGTTTCAGTTATTTTTTTCATTTCACAGGCACATATCTTGAAAGAGTTCCCAGATGAACTAACTTTAGTCTTGATATATTCCATTACTGCCACAATCATATCTACACTTGTAGCTTTGTTATCAGTTCCAAATTCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTTTCTTCTGTAAGAGACACTGCAAAACTACTGCTACACTTTGACAAAAATATTTGAGTTGTGTTATTTGACTCACAAGTTTGACATCAATATTCGACATCAACTTTGAGCTTTGTTAACTATGTTCAGCATATGGTTAATTAATATAATAAGGTGTCGCAACTCATTAAATATCCACTAAACACAATTAACCACGATTTTGAACTTCATCAACCACTACTTTCACGTGTTCAGATGCACATATTTATCCATTAACCATCCGAATCGTGCTCTAATATATATGATATTCATTAACCACGTTTTGAGTTCAAATATACGCTTAGAAATCGTGGTCGATGTTCAAAATTATGGTTAACTGTTTTGAGTTGATGGTTAACGAGTTCTAACTTATGTTATATATGTTTGTGTTTATTGATAACACTTTCGTTTCCAGGGAATTTTCGGGAAGTTAATCGGCAATATAGTTTTTGCCTGGGCAATACACTTAAAGGGGGCTGTCTATGTAACCTCGTTCGTGCCACTGCAAATTGTTATCTCTGTTTGGTTGGGAGTTATATTCCTTGGTGATACTCTTCATGTTGGAAGGTATGGTTAATTCAATTTTTGCATTTGATTCTTTGTGACAGAACTATACTAAATTGCTATTGTTAACTGATAATTAGGACTTCAAAAAAAAAAAAAACGAACCAAATCTAATAGGACTCTTTAAATAGACCAAAAACCAAACTGAAAATATCCGAACTGTGATGGATAGCTCACGAACTTAACTGAACCGAAATGCTTCGGTTCAGTTCATGAACTGTCAGTCACATTTTGGTGCGGAATTGTTAAAATTTAACAGCACTTTACTAATTTTAGTGATGAAGTCTCTCACATTTGTTATAAACTGACTAAATGAAGAGAATATAAGTGAAGTGTCCATTTATGTATATTTTTGTTTATGCATTTTGCAGTATAATTGGAGCCATAATAATCTCAATTGGTCTTTATGCTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGGTAGCTTGGACTCACCATCTACTGAAAATGCACCTCTTCTGCAAAGCTAG
Protein sequence

>MS.gene57082.t1

MTRRWSLYMDFLPPAVIICYECIDMALLTLFKAATLQGMNNHVFIAYAYAVDTSVILPVTLFTRRSRAVPPSISFSIICKSVLLGAIGCSSQILGYISINSSSPTLASAIANLVPAFTFMLAITFRMEKLAAKSKSSNAKVIGSIISIAGAFVLTFYKGQSIMNSSYTHHSSPLHQPIDFLKSVDSSWAIAGILLTIDYFLVSLWYILQAHILKEFPDELTLVLIYSITATIISTLVALLSVPNSSAWKIGLNLSLISIVSSGIFGKLIGNIVFAWAIHLKGAVYVTSFVPLQIVISVWLGVIFLGDTLHVGSIIGAIIISIGLYAVLWGKATEEIEEDVGSLDSPSTENAPLLQS