Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57163.t1 | XP_003611670.1 | 97.3 | 587 | 16 | 0 | 1 | 587 | 1 | 587 | 0.00E+00 | 1153.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57163.t1 | Q9LT75 | 63.2 | 579 | 174 | 14 | 34 | 587 | 47 | 611 | 2.7e-199 | 696.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57163.t1 | G7K591 | 97.3 | 587 | 16 | 0 | 1 | 587 | 1 | 587 | 0.0e+00 | 1153.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050009 | MS.gene57163 | 0.804993 | 1.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57163.t1 | MTR_5g016550 | 97.785 | 587 | 13 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1204 |
| MS.gene57163.t1 | MTR_1g107540 | 61.702 | 611 | 194 | 14 | 6 | 587 | 22 | 621 | 0.0 | 738 |
| MS.gene57163.t1 | MTR_7g012250 | 40.860 | 186 | 100 | 2 | 114 | 299 | 36 | 211 | 1.18e-42 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57163.t1 | AT3G19420 | 62.162 | 592 | 185 | 13 | 21 | 587 | 34 | 611 | 0.0 | 731 |
| MS.gene57163.t1 | AT3G50110 | 61.786 | 560 | 172 | 9 | 39 | 587 | 104 | 632 | 0.0 | 676 |
| MS.gene57163.t1 | AT5G39400 | 41.398 | 186 | 99 | 2 | 114 | 299 | 34 | 209 | 7.72e-43 | 159 |
Find 139 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAACAACGACCACATTT+TGG | 0.230127 | 5.2:+8262176 | None:intergenic |
| GGGCAATTATGATCACTAAA+TGG | 0.238609 | 5.2:+8262259 | None:intergenic |
| GGCTTCACAAATGCCCTTAT+TGG | 0.245308 | 5.2:-8261654 | MS.gene57163:CDS |
| GTGAATGATTCAATTATATT+AGG | 0.246164 | 5.2:+8264989 | None:intergenic |
| ATGTCAGATCCTTTGCTTGC+AGG | 0.261001 | 5.2:+8260657 | None:intergenic |
| ATGGATGGTCTAACCCAATA+AGG | 0.293918 | 5.2:+8261640 | None:intergenic |
| ACAGGAAGGTGGATTTGATT+TGG | 0.308292 | 5.2:-8264123 | MS.gene57163:intron |
| TGGGCGAGAAATCTGAAGTT+TGG | 0.316797 | 5.2:-8265136 | MS.gene57163:CDS |
| CAGTTTCTAGTATATCTTCC+TGG | 0.317240 | 5.2:-8265156 | MS.gene57163:CDS |
| TGCAACTGATTACAAATATA+TGG | 0.332393 | 5.2:-8260505 | MS.gene57163:CDS |
| CCGTGCGTTCGTCATGCTGC+TGG | 0.336679 | 5.2:+8260409 | None:intergenic |
| GCTTCACAAATGCCCTTATT+GGG | 0.348878 | 5.2:-8261653 | MS.gene57163:CDS |
| TTTGTCGAAGTGCATATTCA+TGG | 0.351370 | 5.2:-8262213 | MS.gene57163:CDS |
| TTCCCTCCTTTGTGTTCCCT+TGG | 0.354377 | 5.2:+8260530 | None:intergenic |
| GGGCGAGAAATCTGAAGTTT+GGG | 0.365437 | 5.2:-8265135 | MS.gene57163:CDS |
| GAGCTTGCTACGAGCAGTTC+AGG | 0.368342 | 5.2:-8265022 | MS.gene57163:CDS |
| TAATTGAATCATTCACTAAA+GGG | 0.369778 | 5.2:-8264982 | MS.gene57163:CDS |
| ATAATAGCTATGGGATTTCC+TGG | 0.369907 | 5.2:-8264077 | MS.gene57163:CDS |
| ATTACAATTTCTGATCATAA+TGG | 0.385783 | 5.2:-8261619 | MS.gene57163:intron |
| GATTCCATGTTGGTGGTGTT+AGG | 0.387770 | 5.2:+8260330 | None:intergenic |
| AATGATGCTATAAGTTGAAT+AGG | 0.387784 | 5.2:+8262235 | None:intergenic |
| ACCATTAGATCCTTTGTCTT+GGG | 0.391614 | 5.2:+8261497 | None:intergenic |
| GCATTGATCCAGAAATCTTC+TGG | 0.391902 | 5.2:+8261393 | None:intergenic |
| CATCTTACCTTCGTCCGGGC+TGG | 0.397600 | 5.2:+8261756 | None:intergenic |
| TGTCAGATCCTTTGCTTGCA+GGG | 0.405115 | 5.2:+8260658 | None:intergenic |
| TTCAATTATATTAGGTTGCT+CGG | 0.413613 | 5.2:+8264997 | None:intergenic |
| GGCAATTATGATCACTAAAT+GGG | 0.416144 | 5.2:+8262260 | None:intergenic |
| GATCCCAGCTCCAGGGTTCC+AGG | 0.417514 | 5.2:-8260730 | MS.gene57163:CDS |
| ACCACCAACATGGAATCTAT+AGG | 0.422090 | 5.2:-8260324 | MS.gene57163:CDS |
| AGTTTCATCTTACCTTCGTC+CGG | 0.428921 | 5.2:+8261751 | None:intergenic |
| AGAAACAATATGCCGTGCTT+TGG | 0.429053 | 5.2:+8264919 | None:intergenic |
| TCCCAAGACAAAGGATCTAA+TGG | 0.429717 | 5.2:-8261498 | MS.gene57163:intron |
| GGTGTATGCTGAGAGGGTTT+CGG | 0.429957 | 5.2:-8261675 | MS.gene57163:CDS |
| CCACCAACATGGAATCTATA+GGG | 0.430392 | 5.2:-8260323 | MS.gene57163:CDS |
| ATAATTGAATCATTCACTAA+AGG | 0.434744 | 5.2:-8264983 | MS.gene57163:CDS |
| TGTTCATTGTAAAGCTGGTA+TGG | 0.435047 | 5.2:-8262161 | MS.gene57163:CDS |
| CACTGAAAATATAATAGCTA+TGG | 0.435716 | 5.2:-8264087 | MS.gene57163:CDS |
| CAGGAAGATATACTAGAAAC+TGG | 0.438818 | 5.2:+8265157 | None:intergenic |
| CTCTTACTTGAATTAGATGT+TGG | 0.439796 | 5.2:+8260609 | None:intergenic |
| GACTATGATGGCACCCTACC+TGG | 0.440326 | 5.2:-8260690 | MS.gene57163:CDS |
| TTTCTGGTTAAAGGAATCAA+TGG | 0.442200 | 5.2:+8261959 | None:intergenic |
| GACATAAATAATGCCTCATC+TGG | 0.447201 | 5.2:-8260639 | MS.gene57163:CDS |
| AACCAGAAAAGATGTGTAGA+TGG | 0.447224 | 5.2:-8261945 | MS.gene57163:CDS |
| GTCTTCGAAGGTGGAGGAGC+GGG | 0.447352 | 5.2:+8265244 | None:intergenic |
| TCTGTCAGACCTGGCTCCCC+TGG | 0.450444 | 5.2:+8261339 | None:intergenic |
| CAGAGAAAGATCCCAGCTCC+AGG | 0.457657 | 5.2:-8260738 | MS.gene57163:CDS |
| TCGACCTGGAACCCTGGAGC+TGG | 0.458519 | 5.2:+8260726 | None:intergenic |
| CTCTTCAAAGGAAGCAGTAA+AGG | 0.459094 | 5.2:-8264951 | MS.gene57163:CDS |
| TACCATTAGATCCTTTGTCT+TGG | 0.463104 | 5.2:+8261496 | None:intergenic |
| GGAGCCAGGTCTGACAGAAT+TGG | 0.466471 | 5.2:-8261334 | MS.gene57163:CDS |
| CCCTATAGATTCCATGTTGG+TGG | 0.466488 | 5.2:+8260323 | None:intergenic |
| TATAGGGACAAGTGAATTCA+AGG | 0.468706 | 5.2:-8260307 | MS.gene57163:CDS |
| ATCAATGGCTTCCTCAGCAG+TGG | 0.477990 | 5.2:+8261974 | None:intergenic |
| GCTCGTCTTACTAGTGGGAT+TGG | 0.481083 | 5.2:-8265064 | MS.gene57163:CDS |
| ACAACTTCGACCTGGAACCC+TGG | 0.483885 | 5.2:+8260720 | None:intergenic |
| GCTCGTAGCAAGCTCATTTG+AGG | 0.487048 | 5.2:+8265030 | None:intergenic |
| TTTGCATTACCAGGGGAGCC+AGG | 0.493421 | 5.2:-8261348 | MS.gene57163:CDS |
| ATCATTCACTAAAGGGTTGG+TGG | 0.498981 | 5.2:-8264975 | MS.gene57163:CDS |
| GCATTTGCTCGTCTTACTAG+TGG | 0.501282 | 5.2:-8265070 | MS.gene57163:CDS |
| TGGATCAATGCATCAAAGAA+AGG | 0.505856 | 5.2:-8261381 | MS.gene57163:CDS |
| AAATTACTAACAATTTGACT+TGG | 0.506905 | 5.2:+8261906 | None:intergenic |
| ATCGACAGGGAGATTTCTAC+TGG | 0.511246 | 5.2:-8261284 | MS.gene57163:intron |
| AGAAATCTGAAGTTTGGGGC+TGG | 0.513911 | 5.2:-8265130 | MS.gene57163:CDS |
| GTCGTTGTTCATTGTAAAGC+TGG | 0.516023 | 5.2:-8262166 | MS.gene57163:CDS |
| CTCGTAGCAAGCTCATTTGA+GGG | 0.518109 | 5.2:+8265031 | None:intergenic |
| AAGTGCATATTCATGGTTGA+AGG | 0.518532 | 5.2:-8262206 | MS.gene57163:CDS |
| CATTTGCTCGTCTTACTAGT+GGG | 0.521146 | 5.2:-8265069 | MS.gene57163:CDS |
| AATTACTAACAATTTGACTT+GGG | 0.526266 | 5.2:+8261907 | None:intergenic |
| TGGATGGTCTAACCCAATAA+GGG | 0.541504 | 5.2:+8261641 | None:intergenic |
| CGACCTGGAACCCTGGAGCT+GGG | 0.541883 | 5.2:+8260727 | None:intergenic |
| TGAATCATTCACTAAAGGGT+TGG | 0.542994 | 5.2:-8264978 | MS.gene57163:CDS |
| ATTATGATCAGAAATTGTAA+TGG | 0.543592 | 5.2:+8261621 | None:intergenic |
| ACTGAAAATATAATAGCTAT+GGG | 0.543686 | 5.2:-8264086 | MS.gene57163:CDS |
| AAACTTCATAATATTCATGC+AGG | 0.544352 | 5.2:-8260354 | MS.gene57163:CDS |
| AGTTTCTAGTATATCTTCCT+GGG | 0.544911 | 5.2:-8265155 | MS.gene57163:CDS |
| TCAAAATAAACGCAGATACC+AGG | 0.545779 | 5.2:-8264897 | MS.gene57163:intron |
| AAAGCTGGTATGGGAAGGAC+AGG | 0.551221 | 5.2:-8262151 | MS.gene57163:CDS |
| TCCACAGGTGTATGCTGAGA+GGG | 0.552284 | 5.2:-8261681 | MS.gene57163:intron |
| GAAAAGATGTGTAGATGGAA+AGG | 0.552661 | 5.2:-8261940 | MS.gene57163:CDS |
| AGTTCAGTCTTCGAAGGTGG+AGG | 0.554143 | 5.2:+8265238 | None:intergenic |
| GTTCATTGTAAAGCTGGTAT+GGG | 0.554917 | 5.2:-8262160 | MS.gene57163:CDS |
| TGATCAGAAATTGTAATGGA+TGG | 0.555457 | 5.2:+8261625 | None:intergenic |
| GACCAAGGGAACACAAAGGA+GGG | 0.557131 | 5.2:-8260532 | MS.gene57163:CDS |
| AGGCCACTACTGACCATGTA+GGG | 0.559645 | 5.2:-8260464 | MS.gene57163:CDS |
| AGGGTTGGTGGACTCTTCAA+AGG | 0.561799 | 5.2:-8264963 | MS.gene57163:CDS |
| TTACCTTAAGATACAAAAGA+AGG | 0.562827 | 5.2:+8262113 | None:intergenic |
| GATGCTATAAGTTGAATAGG+AGG | 0.564724 | 5.2:+8262238 | None:intergenic |
| TCAATGGCTTCCTCAGCAGT+GGG | 0.569100 | 5.2:+8261975 | None:intergenic |
| AATAAAACTATACCTTCCCC+TGG | 0.569386 | 5.2:+8263269 | None:intergenic |
| GTTTCATCTTACCTTCGTCC+GGG | 0.569711 | 5.2:+8261752 | None:intergenic |
| AGGGATGTTGTCGCGCGCAA+CGG | 0.573248 | 5.2:-8260445 | MS.gene57163:CDS |
| AAACTTCAGATTTCTCGCCC+AGG | 0.578026 | 5.2:+8265138 | None:intergenic |
| CGCGCGACAACATCCCTACA+TGG | 0.578706 | 5.2:+8260451 | None:intergenic |
| AAAGTCAACCCTGCAAGCAA+AGG | 0.578759 | 5.2:-8260666 | MS.gene57163:CDS |
| ATTCTCAGATAGCGATGAAG+AGG | 0.578903 | 5.2:-8260556 | MS.gene57163:CDS |
| CTACCATCACAACTTCGACC+TGG | 0.580131 | 5.2:+8260712 | None:intergenic |
| TGTTGGCTTTGCACCAGATG+AGG | 0.582412 | 5.2:+8260626 | None:intergenic |
| AGACCAAGGGAACACAAAGG+AGG | 0.583368 | 5.2:-8260533 | MS.gene57163:CDS |
| TAGCGATGAAGAGGAGACCA+AGG | 0.585592 | 5.2:-8260547 | MS.gene57163:CDS |
| AGTCTTCGAAGGTGGAGGAG+CGG | 0.589299 | 5.2:+8265243 | None:intergenic |
| CCAACCAATTCTGTCAGACC+TGG | 0.594002 | 5.2:+8261330 | None:intergenic |
| CGGACTTTAACACACTTCAA+CGG | 0.596252 | 5.2:-8261785 | MS.gene57163:CDS |
| TAAAGTTCAGTCTTCGAAGG+TGG | 0.601249 | 5.2:+8265235 | None:intergenic |
| TATACAATCTTTGTTCAGAG+AGG | 0.602650 | 5.2:-8263312 | MS.gene57163:CDS |
| TTCAACGGACAAGTCCAGCC+CGG | 0.607561 | 5.2:-8261770 | MS.gene57163:CDS |
| GACTGAGAACAGTGGCATGT+CGG | 0.608063 | 5.2:-8265092 | MS.gene57163:CDS |
| TTAACTCTGTAACAGGAAGG+TGG | 0.609972 | 5.2:-8264134 | MS.gene57163:intron |
| CTAGAAACTGGTGACAAGGA+TGG | 0.613708 | 5.2:+8265169 | None:intergenic |
| GTTCCAGGTCGAAGTTGTGA+TGG | 0.614063 | 5.2:-8260715 | MS.gene57163:CDS |
| TGTCCCTATAGATTCCATGT+TGG | 0.614065 | 5.2:+8260320 | None:intergenic |
| CATCCCTACATGGTCAGTAG+TGG | 0.615666 | 5.2:+8260461 | None:intergenic |
| GACAAGTCCAGCCCGGACGA+AGG | 0.618832 | 5.2:-8261763 | MS.gene57163:intron |
| GAGGCCACTACTGACCATGT+AGG | 0.621926 | 5.2:-8260465 | MS.gene57163:CDS |
| ATGCTATAAGTTGAATAGGA+GGG | 0.622454 | 5.2:+8262239 | None:intergenic |
| TGCATATTCATGGTTGAAGG+AGG | 0.622487 | 5.2:-8262203 | MS.gene57163:CDS |
| TTTAGTCTTTGCATTACCAG+GGG | 0.622542 | 5.2:-8261355 | MS.gene57163:CDS |
| CCAGAGCTAAAATCACCACC+AGG | 0.625547 | 5.2:+8264059 | None:intergenic |
| GGAACCTCATCAAGCATCTG+AGG | 0.628106 | 5.2:-8260484 | MS.gene57163:CDS |
| GAGTAAAGTTCAGTCTTCGA+AGG | 0.629011 | 5.2:+8265232 | None:intergenic |
| TAGAAAGCATCCCAAGACAA+AGG | 0.629907 | 5.2:-8261507 | MS.gene57163:CDS |
| CCAGGTCTGACAGAATTGGT+TGG | 0.630334 | 5.2:-8261330 | MS.gene57163:CDS |
| ATTGTAAAGCTGGTATGGGA+AGG | 0.630358 | 5.2:-8262156 | MS.gene57163:CDS |
| AGAGAAAGATCCCAGCTCCA+GGG | 0.638717 | 5.2:-8260737 | MS.gene57163:CDS |
| GGCGAGAAATCTGAAGTTTG+GGG | 0.643756 | 5.2:-8265134 | MS.gene57163:CDS |
| TATACTAGAAACTGGTGACA+AGG | 0.644336 | 5.2:+8265165 | None:intergenic |
| AGGCAGTGCAGACCAAAGCA+CGG | 0.648450 | 5.2:-8264931 | MS.gene57163:CDS |
| CCAGCAGCATGACGAACGCA+CGG | 0.649232 | 5.2:-8260409 | MS.gene57163:CDS |
| GGGGTTCTATCGAAATCACA+TGG | 0.653811 | 5.2:-8263934 | MS.gene57163:CDS |
| TTCCACAGGTGTATGCTGAG+AGG | 0.654856 | 5.2:-8261682 | MS.gene57163:intron |
| AGGAGACCAAGGGAACACAA+AGG | 0.655502 | 5.2:-8260536 | MS.gene57163:CDS |
| TGTTCAGAGAGGTTGTACGA+TGG | 0.656307 | 5.2:-8263301 | MS.gene57163:CDS |
| GAAGGAGGATATCCAAAATG+TGG | 0.657507 | 5.2:-8262188 | MS.gene57163:CDS |
| AGGTCCTAACACCACCAACA+TGG | 0.659756 | 5.2:-8260334 | MS.gene57163:CDS |
| GTGGCCTCAGATGCTTGATG+AGG | 0.665913 | 5.2:+8260480 | None:intergenic |
| GTTGTGATGGTAGACTATGA+TGG | 0.676104 | 5.2:-8260702 | MS.gene57163:CDS |
| AGCGATGAAGAGGAGACCAA+GGG | 0.680704 | 5.2:-8260546 | MS.gene57163:CDS |
| CAATGGCTTCCTCAGCAGTG+GGG | 0.728366 | 5.2:+8261976 | None:intergenic |
| ATAGCTATGGGATTTCCTGG+TGG | 0.733310 | 5.2:-8264074 | MS.gene57163:CDS |
| AACTCACAGACTGAGAACAG+TGG | 0.745872 | 5.2:-8265100 | MS.gene57163:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAATGTTCA+TGG | + | chr5.2:8260692-8260711 | None:intergenic | 10.0% |
| !! | TATATTATGTTTAGAAAATA+TGG | - | chr5.2:8262674-8262693 | MS.gene57163:intron | 10.0% |
| !! | TATTTAAATAAATTCTTCAT+TGG | - | chr5.2:8264370-8264389 | MS.gene57163:intron | 10.0% |
| !! | TTAGTAAAATATAAATGATA+CGG | - | chr5.2:8261865-8261884 | MS.gene57163:intron | 10.0% |
| !!! | AATTTTCTTTTATTTTTGTT+TGG | - | chr5.2:8263097-8263116 | MS.gene57163:intron | 10.0% |
| !!! | ATTTTTTATTTAAAAATGTC+TGG | - | chr5.2:8260705-8260724 | MS.gene57163:CDS | 10.0% |
| !!! | TTTTTATATCCAATTTTTAT+CGG | + | chr5.2:8263067-8263086 | None:intergenic | 10.0% |
| !! | ATGATAGTAAATATTAAGAA+AGG | + | chr5.2:8262565-8262584 | None:intergenic | 15.0% |
| !! | TAATATTTACTATCATATAG+TGG | - | chr5.2:8262569-8262588 | MS.gene57163:intron | 15.0% |
| !! | TTCATCATTATAAAAACATT+TGG | + | chr5.2:8264438-8264457 | None:intergenic | 15.0% |
| !! | TTGAATTATACATAATATTG+AGG | - | chr5.2:8262884-8262903 | MS.gene57163:intron | 15.0% |
| !! | TTTCTAAACATAATATATGA+TGG | + | chr5.2:8262671-8262690 | None:intergenic | 15.0% |
| !!! | AACAAAATTTTGAACTAATA+TGG | + | chr5.2:8262532-8262551 | None:intergenic | 15.0% |
| !!! | ACAAAATTTTGAACTAATAT+GGG | + | chr5.2:8262531-8262550 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTATACTATTTTG+AGG | + | chr5.2:8261019-8261038 | None:intergenic | 15.0% |
| !!! | ATTTTTCAATGTTATTTTGT+GGG | - | chr5.2:8264665-8264684 | MS.gene57163:intron | 15.0% |
| !!! | TATTTTTCAATGTTATTTTG+TGG | - | chr5.2:8264664-8264683 | MS.gene57163:intron | 15.0% |
| !!! | TTTTGTAAAAAATAAACTAG+CGG | + | chr5.2:8263157-8263176 | None:intergenic | 15.0% |
| !! | AAATTACTAACAATTTGACT+TGG | + | chr5.2:8263595-8263614 | None:intergenic | 20.0% |
| !! | AATATAAATGATACGGAAAT+TGG | - | chr5.2:8261872-8261891 | MS.gene57163:intron | 20.0% |
| !! | ACTGAAAATATAATAGCTAT+GGG | - | chr5.2:8261412-8261431 | MS.gene57163:intron | 20.0% |
| !! | ATAATTGAATCATTCACTAA+AGG | - | chr5.2:8260515-8260534 | MS.gene57163:CDS | 20.0% |
| !! | ATTACAATTTCTGATCATAA+TGG | - | chr5.2:8263879-8263898 | MS.gene57163:intron | 20.0% |
| !! | ATTATGATCAGAAATTGTAA+TGG | + | chr5.2:8263880-8263899 | None:intergenic | 20.0% |
| !! | CATCTATTAAAGAATCAAAT+TGG | - | chr5.2:8261172-8261191 | MS.gene57163:intron | 20.0% |
| !! | CTCAATTATAAATTACTGTT+TGG | + | chr5.2:8261950-8261969 | None:intergenic | 20.0% |
| !! | GTGAATGATTCAATTATATT+AGG | + | chr5.2:8260512-8260531 | None:intergenic | 20.0% |
| !! | TAATTGAATCATTCACTAAA+GGG | - | chr5.2:8260516-8260535 | MS.gene57163:CDS | 20.0% |
| !! | TTTGAAAATAATTACTTGCT+GGG | - | chr5.2:8263481-8263500 | MS.gene57163:intron | 20.0% |
| !!! | AATTACTAACAATTTGACTT+GGG | + | chr5.2:8263594-8263613 | None:intergenic | 20.0% |
| !!! | ACATTTTATTAATCTAGAGA+AGG | - | chr5.2:8263929-8263948 | MS.gene57163:CDS | 20.0% |
| !!! | GATATGTCAAATATTTTGAA+CGG | - | chr5.2:8263693-8263712 | MS.gene57163:intron | 20.0% |
| !!! | GTTTTATTATATTTGCACTA+TGG | - | chr5.2:8262244-8262263 | MS.gene57163:CDS | 20.0% |
| !!! | TCTTCTTTATCATTTTGATA+TGG | - | chr5.2:8264409-8264428 | MS.gene57163:intron | 20.0% |
| !!! | TTTTGAAAATAATTACTTGC+TGG | - | chr5.2:8263480-8263499 | MS.gene57163:intron | 20.0% |
| !!! | TTTTTTAGTTTATCGTGTTA+AGG | - | chr5.2:8263613-8263632 | MS.gene57163:intron | 20.0% |
| !!! | TTTTTTTGAAGAACCTAAAT+TGG | + | chr5.2:8262640-8262659 | None:intergenic | 20.0% |
| ! | AAACTTCATAATATTCATGC+AGG | - | chr5.2:8265144-8265163 | MS.gene57163:CDS | 25.0% |
| ! | AAATGATAAAGAAGACAAGT+AGG | + | chr5.2:8264404-8264423 | None:intergenic | 25.0% |
| ! | AAATTAAGAAAAGCCTTCTT+TGG | + | chr5.2:8263792-8263811 | None:intergenic | 25.0% |
| ! | AAGAAAATCATCTCATATAG+AGG | - | chr5.2:8260912-8260931 | MS.gene57163:CDS | 25.0% |
| ! | AAGAGTAAGATACCTAAAAA+TGG | - | chr5.2:8264907-8264926 | MS.gene57163:CDS | 25.0% |
| ! | ACATTCTTAGTTAGACAAAA+AGG | - | chr5.2:8261093-8261112 | MS.gene57163:intron | 25.0% |
| ! | AGAGAAAACTGAAATCAATA+TGG | + | chr5.2:8261333-8261352 | None:intergenic | 25.0% |
| ! | AGCATAAAACCGATAAAAAT+TGG | - | chr5.2:8263055-8263074 | MS.gene57163:intron | 25.0% |
| ! | CACTGAAAATATAATAGCTA+TGG | - | chr5.2:8261411-8261430 | MS.gene57163:intron | 25.0% |
| ! | GAAAAAGCTAAAGTATAAAG+TGG | + | chr5.2:8264267-8264286 | None:intergenic | 25.0% |
| ! | TAGACATGTAATAATCTTGA+TGG | - | chr5.2:8262287-8262306 | MS.gene57163:intron | 25.0% |
| ! | TCAAATGTAGGCATAAAAAA+TGG | + | chr5.2:8264036-8264055 | None:intergenic | 25.0% |
| ! | TCTTTAATAGATGAAGTCAA+AGG | + | chr5.2:8261165-8261184 | None:intergenic | 25.0% |
| ! | TGCAACTGATTACAAATATA+TGG | - | chr5.2:8264993-8265012 | MS.gene57163:CDS | 25.0% |
| ! | TGTCTAACTAAGAATGTTAA+AGG | + | chr5.2:8261090-8261109 | None:intergenic | 25.0% |
| ! | TGTTCCATTCAAAATACAAT+AGG | + | chr5.2:8261278-8261297 | None:intergenic | 25.0% |
| ! | TTACCTTAAGATACAAAAGA+AGG | + | chr5.2:8263388-8263407 | None:intergenic | 25.0% |
| ! | TTTCAAAATTGCACAATTCA+CGG | + | chr5.2:8263468-8263487 | None:intergenic | 25.0% |
| !! | AAAGAAGGCTTTTCTTAATT+TGG | - | chr5.2:8263791-8263810 | MS.gene57163:intron | 25.0% |
| !! | AAGTTTTCTTCTATATTCCA+AGG | + | chr5.2:8261756-8261775 | None:intergenic | 25.0% |
| !! | AATGATGCTATAAGTTGAAT+AGG | + | chr5.2:8263266-8263285 | None:intergenic | 25.0% |
| !! | ATATTTCTAAGCTATACGAA+GGG | + | chr5.2:8261814-8261833 | None:intergenic | 25.0% |
| !! | CATGGCATATATTTCAATTT+TGG | - | chr5.2:8261626-8261645 | MS.gene57163:CDS | 25.0% |
| !! | GAGAACAGAAAAATTTTAGA+TGG | - | chr5.2:8264604-8264623 | MS.gene57163:intron | 25.0% |
| !! | GTTTCTTATGATTTGACTTT+AGG | + | chr5.2:8261842-8261861 | None:intergenic | 25.0% |
| !! | TTCAATTATATTAGGTTGCT+CGG | + | chr5.2:8260504-8260523 | None:intergenic | 25.0% |
| !!! | AAGTTTTCATCTAAAGTGTA+GGG | + | chr5.2:8261995-8262014 | None:intergenic | 25.0% |
| !!! | ATTAGTTCTGAAAAGAAACT+TGG | - | chr5.2:8264295-8264314 | MS.gene57163:intron | 25.0% |
| !!! | ATTTTAGCTCTGGAATTTTT+GGG | - | chr5.2:8261449-8261468 | MS.gene57163:intron | 25.0% |
| !!! | TTTTTATCGGTTTTATGCTA+TGG | + | chr5.2:8263054-8263073 | None:intergenic | 25.0% |
| !!! | TTTTTTATGCCTACATTTGA+TGG | - | chr5.2:8264036-8264055 | MS.gene57163:intron | 25.0% |
| AACAATCCCAAGAAATCAAT+TGG | + | chr5.2:8263202-8263221 | None:intergenic | 30.0% | |
| AAGGTTGTAAACTTGAAGAA+AGG | + | chr5.2:8261737-8261756 | None:intergenic | 30.0% | |
| ACAATCCCAAGAAATCAATT+GGG | + | chr5.2:8263201-8263220 | None:intergenic | 30.0% | |
| ACATGTAATAATCTTGATGG+TGG | - | chr5.2:8262290-8262309 | MS.gene57163:intron | 30.0% | |
| AGAACTGCAAAATTGTGTAT+AGG | - | chr5.2:8260956-8260975 | MS.gene57163:intron | 30.0% | |
| AGATGAAAACTTGGTATGTT+AGG | - | chr5.2:8262003-8262022 | MS.gene57163:intron | 30.0% | |
| AGCTTAGAAGAGAATAAATC+TGG | + | chr5.2:8264489-8264508 | None:intergenic | 30.0% | |
| CTACACTTTAGATGAAAACT+TGG | - | chr5.2:8261994-8262013 | MS.gene57163:intron | 30.0% | |
| CTCTTACTTGAATTAGATGT+TGG | + | chr5.2:8264892-8264911 | None:intergenic | 30.0% | |
| GAAAAAGTTCAGTGAATCAA+CGG | + | chr5.2:8264712-8264731 | None:intergenic | 30.0% | |
| GATTCAAAATTACTAGAGTG+TGG | + | chr5.2:8262357-8262376 | None:intergenic | 30.0% | |
| GGCAATTATGATCACTAAAT+GGG | + | chr5.2:8263241-8263260 | None:intergenic | 30.0% | |
| TATACAATCTTTGTTCAGAG+AGG | - | chr5.2:8262186-8262205 | MS.gene57163:CDS | 30.0% | |
| TGACGTTGTATAAAGGATAT+AGG | - | chr5.2:8260666-8260685 | MS.gene57163:CDS | 30.0% | |
| TTCACATTTAACTCTGTAAC+AGG | - | chr5.2:8261357-8261376 | MS.gene57163:CDS | 30.0% | |
| TTTGCTAGTACTCAAGAAAT+GGG | - | chr5.2:8261667-8261686 | MS.gene57163:CDS | 30.0% | |
| ! | AATTCATTTTCATGATCGAC+AGG | - | chr5.2:8264200-8264219 | MS.gene57163:intron | 30.0% |
| ! | ATGCTATAAGTTGAATAGGA+GGG | + | chr5.2:8263262-8263281 | None:intergenic | 30.0% |
| ! | ATTCATTTTCATGATCGACA+GGG | - | chr5.2:8264201-8264220 | MS.gene57163:intron | 30.0% |
| ! | ATTTGCTAGTACTCAAGAAA+TGG | - | chr5.2:8261666-8261685 | MS.gene57163:CDS | 30.0% |
| ! | CAGAAAAATTTTAGATGGCT+CGG | - | chr5.2:8264609-8264628 | MS.gene57163:intron | 30.0% |
| ! | GAGAATAAATCTGGAATGTA+TGG | + | chr5.2:8264480-8264499 | None:intergenic | 30.0% |
| ! | GATATTTCTAAGCTATACGA+AGG | + | chr5.2:8261815-8261834 | None:intergenic | 30.0% |
| ! | TGATCAGAAATTGTAATGGA+TGG | + | chr5.2:8263876-8263895 | None:intergenic | 30.0% |
| ! | TTTCTTCAAGTTTACAACCT+TGG | - | chr5.2:8261736-8261755 | MS.gene57163:intron | 30.0% |
| !! | AAGATTTTGAGAGTGATTGA+TGG | - | chr5.2:8265253-8265272 | MS.gene57163:CDS | 30.0% |
| !! | ACATCATCATCTCCATTTTT+AGG | + | chr5.2:8264922-8264941 | None:intergenic | 30.0% |
| !! | AGTTTCTAGTATATCTTCCT+GGG | - | chr5.2:8260343-8260362 | MS.gene57163:CDS | 30.0% |
| !! | ATTTTAGTCTTTGCATTACC+AGG | - | chr5.2:8264141-8264160 | MS.gene57163:intron | 30.0% |
| !! | CAAATTGGTGTTGATTTCTT+AGG | - | chr5.2:8261187-8261206 | MS.gene57163:intron | 30.0% |
| !! | CAAGTTTTCATCTAAAGTGT+AGG | + | chr5.2:8261996-8262015 | None:intergenic | 30.0% |
| !! | TCATTTTTCCAATGCATGTA+TGG | - | chr5.2:8260874-8260893 | MS.gene57163:CDS | 30.0% |
| !! | TGAGCCTATTGTATTTTGAA+TGG | - | chr5.2:8261271-8261290 | MS.gene57163:intron | 30.0% |
| !! | TTTCTGGTTAAAGGAATCAA+TGG | + | chr5.2:8263542-8263561 | None:intergenic | 30.0% |
| !! | TTTTAGTCTTTGCATTACCA+GGG | - | chr5.2:8264142-8264161 | MS.gene57163:intron | 30.0% |
| !!! | GATGCTTCAGTTTTTTCTTT+TGG | - | chr5.2:8265225-8265244 | MS.gene57163:CDS | 30.0% |
| !!! | GATTTTAGCTCTGGAATTTT+TGG | - | chr5.2:8261448-8261467 | MS.gene57163:intron | 30.0% |
| !!! | GTTTTTTGAAACTCATCACA+AGG | - | chr5.2:8261600-8261619 | MS.gene57163:intron | 30.0% |
| !!! | TACACATCTTTTCTGGTTAA+AGG | + | chr5.2:8263551-8263570 | None:intergenic | 30.0% |
| AAACATCTGCTTAGAATCCT+AGG | - | chr5.2:8261033-8261052 | MS.gene57163:intron | 35.0% | |
| AAACTCATCACAAGGTAACA+TGG | - | chr5.2:8261608-8261627 | MS.gene57163:intron | 35.0% | |
| AACCAGAAAAGATGTGTAGA+TGG | - | chr5.2:8263553-8263572 | MS.gene57163:intron | 35.0% | |
| AAGTGCATATTCATGGTTGA+AGG | - | chr5.2:8263292-8263311 | MS.gene57163:CDS | 35.0% | |
| AATAAAACTATACCTTCCCC+TGG | + | chr5.2:8262232-8262251 | None:intergenic | 35.0% | |
| ACCATTAGATCCTTTGTCTT+GGG | + | chr5.2:8264004-8264023 | None:intergenic | 35.0% | |
| AGAAAAGCCTTCTTTGGATT+TGG | + | chr5.2:8263786-8263805 | None:intergenic | 35.0% | |
| ATAATAGCTATGGGATTTCC+TGG | - | chr5.2:8261421-8261440 | MS.gene57163:intron | 35.0% | |
| ATGACTGAATCTGGTTATGA+GGG | + | chr5.2:8261510-8261529 | None:intergenic | 35.0% | |
| ATTTGCACTATGGCACTAAT+TGG | - | chr5.2:8262254-8262273 | MS.gene57163:CDS | 35.0% | |
| CAATGTACCAAATCCAAAGA+AGG | - | chr5.2:8263776-8263795 | MS.gene57163:intron | 35.0% | |
| CAGGAAGATATACTAGAAAC+TGG | + | chr5.2:8260344-8260363 | None:intergenic | 35.0% | |
| CATATCAATTCTTCTGTAGG+AGG | + | chr5.2:8261066-8261085 | None:intergenic | 35.0% | |
| CATTTAACTCTGTAACAGGA+AGG | - | chr5.2:8261361-8261380 | MS.gene57163:CDS | 35.0% | |
| CTAAGAGTCTATGAAACTAG+AGG | + | chr5.2:8262757-8262776 | None:intergenic | 35.0% | |
| CTTCTAAGCTGTGTAATGTA+TGG | - | chr5.2:8264499-8264518 | MS.gene57163:intron | 35.0% | |
| GAAAAGATGTGTAGATGGAA+AGG | - | chr5.2:8263558-8263577 | MS.gene57163:intron | 35.0% | |
| GACATAAATAATGCCTCATC+TGG | - | chr5.2:8264859-8264878 | MS.gene57163:intron | 35.0% | |
| GATTTCTTGGGATTGTTTAC+AGG | - | chr5.2:8263205-8263224 | MS.gene57163:intron | 35.0% | |
| GGACATATCAATTCTTCTGT+AGG | + | chr5.2:8261069-8261088 | None:intergenic | 35.0% | |
| GGGCAATTATGATCACTAAA+TGG | + | chr5.2:8263242-8263261 | None:intergenic | 35.0% | |
| GTGTAAATTGTTAACTGACC+TGG | + | chr5.2:8260622-8260641 | None:intergenic | 35.0% | |
| GTTCATTGTAAAGCTGGTAT+GGG | - | chr5.2:8263338-8263357 | MS.gene57163:intron | 35.0% | |
| TACCATTAGATCCTTTGTCT+TGG | + | chr5.2:8264005-8264024 | None:intergenic | 35.0% | |
| TATACTAGAAACTGGTGACA+AGG | + | chr5.2:8260336-8260355 | None:intergenic | 35.0% | |
| TATAGGGACAAGTGAATTCA+AGG | - | chr5.2:8265191-8265210 | MS.gene57163:CDS | 35.0% | |
| TATCAATAGTGAGTGTACAC+TGG | + | chr5.2:8262931-8262950 | None:intergenic | 35.0% | |
| TCAAAATAAACGCAGATACC+AGG | - | chr5.2:8260601-8260620 | MS.gene57163:CDS | 35.0% | |
| TGAACATTTCATGCACTTCT+TGG | - | chr5.2:8262405-8262424 | MS.gene57163:intron | 35.0% | |
| TGAATCATTCACTAAAGGGT+TGG | - | chr5.2:8260520-8260539 | MS.gene57163:CDS | 35.0% | |
| TGATGTCTTCACTTATTCTC+AGG | - | chr5.2:8263953-8263972 | MS.gene57163:intron | 35.0% | |
| TGGATCAATGCATCAAAGAA+AGG | - | chr5.2:8264117-8264136 | MS.gene57163:CDS | 35.0% | |
| TGTTCATTGTAAAGCTGGTA+TGG | - | chr5.2:8263337-8263356 | MS.gene57163:intron | 35.0% | |
| TTAATACGTCAGTTTCTCCT+TGG | - | chr5.2:8264556-8264575 | MS.gene57163:intron | 35.0% | |
| TTATACAACGTCAGTAACAC+AGG | + | chr5.2:8260659-8260678 | None:intergenic | 35.0% | |
| TTTCATAGCCATACATGCAT+TGG | + | chr5.2:8260885-8260904 | None:intergenic | 35.0% | |
| TTTGTCGAAGTGCATATTCA+TGG | - | chr5.2:8263285-8263304 | MS.gene57163:CDS | 35.0% | |
| ! | AATGAACAACGACCACATTT+TGG | + | chr5.2:8263325-8263344 | None:intergenic | 35.0% |
| ! | AATTGACTCATGACTGAATC+TGG | + | chr5.2:8261519-8261538 | None:intergenic | 35.0% |
| ! | ACACAAAGTACCAAAACTTC+AGG | - | chr5.2:8260846-8260865 | MS.gene57163:intron | 35.0% |
| ! | ATTTTCAGCCAGAAGATTTC+TGG | - | chr5.2:8264097-8264116 | MS.gene57163:CDS | 35.0% |
| ! | CAGCCTTCTTTTGTATCTTA+AGG | - | chr5.2:8263382-8263401 | MS.gene57163:intron | 35.0% |
| ! | CTCTAGTTTCATAGACTCTT+AGG | - | chr5.2:8262755-8262774 | MS.gene57163:intron | 35.0% |
| ! | GATGCTATAAGTTGAATAGG+AGG | + | chr5.2:8263263-8263282 | None:intergenic | 35.0% |
| ! | GTGTTACTGACGTTGTATAA+AGG | - | chr5.2:8260659-8260678 | MS.gene57163:CDS | 35.0% |
| ! | GTGTTGTTGAGGAACATTTA+TGG | + | chr5.2:8260737-8260756 | None:intergenic | 35.0% |
| ! | TGATGATGCCTTTAACATGA+CGG | + | chr5.2:8261128-8261147 | None:intergenic | 35.0% |
| ! | TTCCATCTACACATCTTTTC+TGG | + | chr5.2:8263558-8263577 | None:intergenic | 35.0% |
| ! | TTCTTAATTTGGACTTCCAC+AGG | - | chr5.2:8263802-8263821 | MS.gene57163:intron | 35.0% |
| ! | TTTAGTCTTTGCATTACCAG+GGG | - | chr5.2:8264143-8264162 | MS.gene57163:intron | 35.0% |
| !! | ATCATATAGTGGTGTTGACT+TGG | - | chr5.2:8262580-8262599 | MS.gene57163:intron | 35.0% |
| !! | CAGTTTCTAGTATATCTTCC+TGG | - | chr5.2:8260342-8260361 | MS.gene57163:CDS | 35.0% |
| !! | GGATCTTGATGATTTTGACA+AGG | - | chr5.2:8264630-8264649 | MS.gene57163:intron | 35.0% |
| !! | TCATATAGTGGTGTTGACTT+GGG | - | chr5.2:8262581-8262600 | MS.gene57163:intron | 35.0% |
| !! | TTGCAGTTCTAGTTTGTAAC+AGG | + | chr5.2:8260946-8260965 | None:intergenic | 35.0% |
| !!! | TGGAATTTTTGGGTACATTG+AGG | - | chr5.2:8261459-8261478 | MS.gene57163:intron | 35.0% |
| AACACAGGCAAAATTGAAGC+AGG | + | chr5.2:8260644-8260663 | None:intergenic | 40.0% | |
| AATTACTAGAGTGTGGCAGA+TGG | + | chr5.2:8262350-8262369 | None:intergenic | 40.0% | |
| ACCACCAACATGGAATCTAT+AGG | - | chr5.2:8265174-8265193 | MS.gene57163:CDS | 40.0% | |
| AGAAACAATATGCCGTGCTT+TGG | + | chr5.2:8260582-8260601 | None:intergenic | 40.0% | |
| AGCTATACGAAGGGATATAC+TGG | + | chr5.2:8261805-8261824 | None:intergenic | 40.0% | |
| AGTTTCATCTTACCTTCGTC+CGG | + | chr5.2:8263750-8263769 | None:intergenic | 40.0% | |
| ATACTTTGTACTTTCCCTGC+AGG | + | chr5.2:8262169-8262188 | None:intergenic | 40.0% | |
| ATCATTCACTAAAGGGTTGG+TGG | - | chr5.2:8260523-8260542 | MS.gene57163:CDS | 40.0% | |
| ATGATGCCTTTAACATGACG+GGG | + | chr5.2:8261126-8261145 | None:intergenic | 40.0% | |
| ATGCGTGTACCATCAAATGT+AGG | + | chr5.2:8264048-8264067 | None:intergenic | 40.0% | |
| ATGGATGGTCTAACCCAATA+AGG | + | chr5.2:8263861-8263880 | None:intergenic | 40.0% | |
| ATTCTCAGATAGCGATGAAG+AGG | - | chr5.2:8264942-8264961 | MS.gene57163:CDS | 40.0% | |
| ATTGTAAAGCTGGTATGGGA+AGG | - | chr5.2:8263342-8263361 | MS.gene57163:intron | 40.0% | |
| CATGACTGAATCTGGTTATG+AGG | + | chr5.2:8261511-8261530 | None:intergenic | 40.0% | |
| CATTTGCTCGTCTTACTAGT+GGG | - | chr5.2:8260429-8260448 | MS.gene57163:CDS | 40.0% | |
| CCACCAACATGGAATCTATA+GGG | - | chr5.2:8265175-8265194 | MS.gene57163:CDS | 40.0% | |
| CGGACTTTAACACACTTCAA+CGG | - | chr5.2:8263713-8263732 | MS.gene57163:intron | 40.0% | |
| CTCTTCAAAGGAAGCAGTAA+AGG | - | chr5.2:8260547-8260566 | MS.gene57163:CDS | 40.0% | |
| CTGTAGGAGGTAATAAACCT+AGG | + | chr5.2:8261053-8261072 | None:intergenic | 40.0% | |
| GAAGGAGGATATCCAAAATG+TGG | - | chr5.2:8263310-8263329 | MS.gene57163:CDS | 40.0% | |
| GAGTAAAGTTCAGTCTTCGA+AGG | + | chr5.2:8260269-8260288 | None:intergenic | 40.0% | |
| GATGATGCCTTTAACATGAC+GGG | + | chr5.2:8261127-8261146 | None:intergenic | 40.0% | |
| GCATCACAACTCAAAACTGA+TGG | + | chr5.2:8262478-8262497 | None:intergenic | 40.0% | |
| GCTTCACAAATGCCCTTATT+GGG | - | chr5.2:8263845-8263864 | MS.gene57163:intron | 40.0% | |
| GTCGTTGTTCATTGTAAAGC+TGG | - | chr5.2:8263332-8263351 | MS.gene57163:intron | 40.0% | |
| GTTGTGATGGTAGACTATGA+TGG | - | chr5.2:8264796-8264815 | MS.gene57163:intron | 40.0% | |
| TAAAGTTCAGTCTTCGAAGG+TGG | + | chr5.2:8260266-8260285 | None:intergenic | 40.0% | |
| TAAGAGAGAACTGTGTTGCA+GGG | - | chr5.2:8261544-8261563 | MS.gene57163:intron | 40.0% | |
| TCCCAAGACAAAGGATCTAA+TGG | - | chr5.2:8264000-8264019 | MS.gene57163:intron | 40.0% | |
| TGACTGAATCTGGTTATGAG+GGG | + | chr5.2:8261509-8261528 | None:intergenic | 40.0% | |
| TGCATATTCATGGTTGAAGG+AGG | - | chr5.2:8263295-8263314 | MS.gene57163:CDS | 40.0% | |
| TGGATGGTCTAACCCAATAA+GGG | + | chr5.2:8263860-8263879 | None:intergenic | 40.0% | |
| TGGTTAGACTATGTTCCAGT+TGG | + | chr5.2:8262330-8262349 | None:intergenic | 40.0% | |
| TGTCCCTATAGATTCCATGT+TGG | + | chr5.2:8265181-8265200 | None:intergenic | 40.0% | |
| TTAACTCTGTAACAGGAAGG+TGG | - | chr5.2:8261364-8261383 | MS.gene57163:CDS | 40.0% | |
| TTAAGAGAGAACTGTGTTGC+AGG | - | chr5.2:8261543-8261562 | MS.gene57163:intron | 40.0% | |
| TTAGACTATGTTCCAGTTGG+AGG | + | chr5.2:8262327-8262346 | None:intergenic | 40.0% | |
| TTAGTCTCTTGAAACCTGCA+GGG | - | chr5.2:8262152-8262171 | MS.gene57163:CDS | 40.0% | |
| TTTAGTCTCTTGAAACCTGC+AGG | - | chr5.2:8262151-8262170 | MS.gene57163:CDS | 40.0% | |
| ! | AATGAGTGTGCCTGAAGTTT+TGG | + | chr5.2:8260859-8260878 | None:intergenic | 40.0% |
| ! | ACAGGAAGGTGGATTTGATT+TGG | - | chr5.2:8261375-8261394 | MS.gene57163:CDS | 40.0% |
| ! | ATTTTCAGCAGGTACTTTGG+CGG | + | chr5.2:8260291-8260310 | None:intergenic | 40.0% |
| ! | GCATTGATCCAGAAATCTTC+TGG | + | chr5.2:8264108-8264127 | None:intergenic | 40.0% |
| ! | GTCTGCCCAATTGATTTCTT+GGG | - | chr5.2:8263193-8263212 | MS.gene57163:intron | 40.0% |
| ! | TTTACAAGAGCGTGTTGTTG+AGG | + | chr5.2:8260748-8260767 | None:intergenic | 40.0% |
| !! | GTCATTTTCAGCAGGTACTT+TGG | + | chr5.2:8260294-8260313 | None:intergenic | 40.0% |
| !! | TACGATGGATCACTTTTCCA+GGG | - | chr5.2:8262212-8262231 | MS.gene57163:CDS | 40.0% |
| !! | TAGAAAGCATCCCAAGACAA+AGG | - | chr5.2:8263991-8264010 | MS.gene57163:intron | 40.0% |
| AAACTTCAGATTTCTCGCCC+AGG | + | chr5.2:8260363-8260382 | None:intergenic | 45.0% | |
| AAAGTCAACCCTGCAAGCAA+AGG | - | chr5.2:8264832-8264851 | MS.gene57163:intron | 45.0% | |
| AACTCACAGACTGAGAACAG+TGG | - | chr5.2:8260398-8260417 | MS.gene57163:CDS | 45.0% | |
| AAGAGAGAACTGTGTTGCAG+GGG | - | chr5.2:8261545-8261564 | MS.gene57163:intron | 45.0% | |
| AGCTGGGATCTTTCTCTGAA+GGG | + | chr5.2:8264758-8264777 | None:intergenic | 45.0% | |
| ATAGCTATGGGATTTCCTGG+TGG | - | chr5.2:8261424-8261443 | MS.gene57163:intron | 45.0% | |
| ATCGACAGGGAGATTTCTAC+TGG | - | chr5.2:8264214-8264233 | MS.gene57163:intron | 45.0% | |
| ATGTCAGATCCTTTGCTTGC+AGG | + | chr5.2:8264844-8264863 | None:intergenic | 45.0% | |
| CACAAGACTGAGACTTCTGA+AGG | - | chr5.2:8262976-8262995 | MS.gene57163:intron | 45.0% | |
| CCCTATAGATTCCATGTTGG+TGG | + | chr5.2:8265178-8265197 | None:intergenic | 45.0% | |
| CTAGAAACTGGTGACAAGGA+TGG | + | chr5.2:8260332-8260351 | None:intergenic | 45.0% | |
| CTCGTAGCAAGCTCATTTGA+GGG | + | chr5.2:8260470-8260489 | None:intergenic | 45.0% | |
| GCATTTGCTCGTCTTACTAG+TGG | - | chr5.2:8260428-8260447 | MS.gene57163:CDS | 45.0% | |
| GGCTTCACAAATGCCCTTAT+TGG | - | chr5.2:8263844-8263863 | MS.gene57163:intron | 45.0% | |
| GGGGTTCTATCGAAATCACA+TGG | - | chr5.2:8261564-8261583 | MS.gene57163:intron | 45.0% | |
| GTTTCATCTTACCTTCGTCC+GGG | + | chr5.2:8263749-8263768 | None:intergenic | 45.0% | |
| TCCAGTTGGAGGCAAATGAT+GGG | + | chr5.2:8262316-8262335 | None:intergenic | 45.0% | |
| TGGTTGCTGTATGAGCTTGT+AGG | + | chr5.2:8261930-8261949 | None:intergenic | 45.0% | |
| TGTCAGATCCTTTGCTTGCA+GGG | + | chr5.2:8264843-8264862 | None:intergenic | 45.0% | |
| TGTTCAGAGAGGTTGTACGA+TGG | - | chr5.2:8262197-8262216 | MS.gene57163:CDS | 45.0% | |
| TTCCAGTTGGAGGCAAATGA+TGG | + | chr5.2:8262317-8262336 | None:intergenic | 45.0% | |
| TTGCTGTATGAGCTTGTAGG+TGG | + | chr5.2:8261927-8261946 | None:intergenic | 45.0% | |
| TTGTGTTCATCCAACTGCCA+AGG | + | chr5.2:8264576-8264595 | None:intergenic | 45.0% | |
| ! | AGAAATCTGAAGTTTGGGGC+TGG | - | chr5.2:8260368-8260387 | MS.gene57163:CDS | 45.0% |
| ! | CGTCTGCCCAATTGATTTCT+TGG | - | chr5.2:8263192-8263211 | MS.gene57163:intron | 45.0% |
| ! | GAGTTGACTTCAGAGACTTG+AGG | - | chr5.2:8263415-8263434 | MS.gene57163:intron | 45.0% |
| ! | GGCGAGAAATCTGAAGTTTG+GGG | - | chr5.2:8260364-8260383 | MS.gene57163:CDS | 45.0% |
| ! | GGGCGAGAAATCTGAAGTTT+GGG | - | chr5.2:8260363-8260382 | MS.gene57163:CDS | 45.0% |
| ! | TGGGCGAGAAATCTGAAGTT+TGG | - | chr5.2:8260362-8260381 | MS.gene57163:CDS | 45.0% |
| !! | ACGATGGATCACTTTTCCAG+GGG | - | chr5.2:8262213-8262232 | MS.gene57163:CDS | 45.0% |
| !! | AGGGTTGACTTTTCCAGGTA+GGG | + | chr5.2:8264824-8264843 | None:intergenic | 45.0% |
| !! | GATTCCATGTTGGTGGTGTT+AGG | + | chr5.2:8265171-8265190 | None:intergenic | 45.0% |
| !! | GTACGATGGATCACTTTTCC+AGG | - | chr5.2:8262211-8262230 | MS.gene57163:CDS | 45.0% |
| !!! | CGTGCATTGTCATTTTCAGC+AGG | + | chr5.2:8260302-8260321 | None:intergenic | 45.0% |
| AAAGCTGGTATGGGAAGGAC+AGG | - | chr5.2:8263347-8263366 | MS.gene57163:intron | 50.0% | |
| AGACCAAGGGAACACAAAGG+AGG | - | chr5.2:8264965-8264984 | MS.gene57163:CDS | 50.0% | |
| AGAGAAAGATCCCAGCTCCA+GGG | - | chr5.2:8264761-8264780 | MS.gene57163:intron | 50.0% | |
| AGCGATGAAGAGGAGACCAA+GGG | - | chr5.2:8264952-8264971 | MS.gene57163:CDS | 50.0% | |
| AGGAGACCAAGGGAACACAA+AGG | - | chr5.2:8264962-8264981 | MS.gene57163:CDS | 50.0% | |
| AGGCCACTACTGACCATGTA+GGG | - | chr5.2:8265034-8265053 | MS.gene57163:CDS | 50.0% | |
| AGGTCCTAACACCACCAACA+TGG | - | chr5.2:8265164-8265183 | MS.gene57163:CDS | 50.0% | |
| AGTTCAGTCTTCGAAGGTGG+AGG | + | chr5.2:8260263-8260282 | None:intergenic | 50.0% | |
| ATCAATGGCTTCCTCAGCAG+TGG | + | chr5.2:8263527-8263546 | None:intergenic | 50.0% | |
| CATCCCTACATGGTCAGTAG+TGG | + | chr5.2:8265040-8265059 | None:intergenic | 50.0% | |
| CCAACCAATTCTGTCAGACC+TGG | + | chr5.2:8264171-8264190 | None:intergenic | 50.0% | |
| CCAGAGCTAAAATCACCACC+AGG | + | chr5.2:8261442-8261461 | None:intergenic | 50.0% | |
| CCAGGTCTGACAGAATTGGT+TGG | - | chr5.2:8264168-8264187 | MS.gene57163:intron | 50.0% | |
| CGAGTTCCCCGTCATGTTAA+AGG | - | chr5.2:8261117-8261136 | MS.gene57163:intron | 50.0% | |
| CTACCATCACAACTTCGACC+TGG | + | chr5.2:8264789-8264808 | None:intergenic | 50.0% | |
| CTGGAATGTATGGCAGAGCT+GGG | + | chr5.2:8264470-8264489 | None:intergenic | 50.0% | |
| GACCAAGGGAACACAAAGGA+GGG | - | chr5.2:8264966-8264985 | MS.gene57163:CDS | 50.0% | |
| GACTGAGAACAGTGGCATGT+CGG | - | chr5.2:8260406-8260425 | MS.gene57163:CDS | 50.0% | |
| GAGCTGGGATCTTTCTCTGA+AGG | + | chr5.2:8264759-8264778 | None:intergenic | 50.0% | |
| GCTCGTAGCAAGCTCATTTG+AGG | + | chr5.2:8260471-8260490 | None:intergenic | 50.0% | |
| GCTCGTCTTACTAGTGGGAT+TGG | - | chr5.2:8260434-8260453 | MS.gene57163:CDS | 50.0% | |
| GGAACCTCATCAAGCATCTG+AGG | - | chr5.2:8265014-8265033 | MS.gene57163:CDS | 50.0% | |
| GGTGTATGCTGAGAGGGTTT+CGG | - | chr5.2:8263823-8263842 | MS.gene57163:intron | 50.0% | |
| GTCAGTTTCTCCTTGGCAGT+TGG | - | chr5.2:8264563-8264582 | MS.gene57163:intron | 50.0% | |
| GTTCCAGGTCGAAGTTGTGA+TGG | - | chr5.2:8264783-8264802 | MS.gene57163:intron | 50.0% | |
| TAGCGATGAAGAGGAGACCA+AGG | - | chr5.2:8264951-8264970 | MS.gene57163:CDS | 50.0% | |
| TCAATGGCTTCCTCAGCAGT+GGG | + | chr5.2:8263526-8263545 | None:intergenic | 50.0% | |
| TCCACAGGTGTATGCTGAGA+GGG | - | chr5.2:8263817-8263836 | MS.gene57163:intron | 50.0% | |
| TTCCACAGGTGTATGCTGAG+AGG | - | chr5.2:8263816-8263835 | MS.gene57163:intron | 50.0% | |
| TTCCCTCCTTTGTGTTCCCT+TGG | + | chr5.2:8264971-8264990 | None:intergenic | 50.0% | |
| ! | TCTGGAATGTATGGCAGAGC+TGG | + | chr5.2:8264471-8264490 | None:intergenic | 50.0% |
| !! | AGGGTTGGTGGACTCTTCAA+AGG | - | chr5.2:8260535-8260554 | MS.gene57163:CDS | 50.0% |
| !! | CAAGGTCTCGGTGCCAATTT+AGG | - | chr5.2:8262624-8262643 | MS.gene57163:intron | 50.0% |
| !! | CAGGGTTGACTTTTCCAGGT+AGG | + | chr5.2:8264825-8264844 | None:intergenic | 50.0% |
| !! | CTTGCAGGGTTGACTTTTCC+AGG | + | chr5.2:8264829-8264848 | None:intergenic | 50.0% |
| !! | TGGATCACTTTTCCAGGGGA+AGG | - | chr5.2:8262217-8262236 | MS.gene57163:CDS | 50.0% |
| !! | TGTTGGCTTTGCACCAGATG+AGG | + | chr5.2:8264875-8264894 | None:intergenic | 50.0% |
| !!! | CCTGGTGGTGATTTTAGCTC+TGG | - | chr5.2:8261439-8261458 | MS.gene57163:intron | 50.0% |
| ACAACTTCGACCTGGAACCC+TGG | + | chr5.2:8264781-8264800 | None:intergenic | 55.0% | |
| ACCCTCTCAGCATACACCTG+TGG | + | chr5.2:8263821-8263840 | None:intergenic | 55.0% | |
| AGGCAGTGCAGACCAAAGCA+CGG | - | chr5.2:8260567-8260586 | MS.gene57163:CDS | 55.0% | |
| AGTCTTCGAAGGTGGAGGAG+CGG | + | chr5.2:8260258-8260277 | None:intergenic | 55.0% | |
| CAATGGCTTCCTCAGCAGTG+GGG | + | chr5.2:8263525-8263544 | None:intergenic | 55.0% | |
| CAGAGAAAGATCCCAGCTCC+AGG | - | chr5.2:8264760-8264779 | MS.gene57163:intron | 55.0% | |
| CTTGAGAGGAGGACACTCCA+AGG | + | chr5.2:8262608-8262627 | None:intergenic | 55.0% | |
| GACTATGATGGCACCCTACC+TGG | - | chr5.2:8264808-8264827 | MS.gene57163:intron | 55.0% | |
| GAGGCCACTACTGACCATGT+AGG | - | chr5.2:8265033-8265052 | MS.gene57163:CDS | 55.0% | |
| GCCCATCATTTGCCTCCAAC+TGG | - | chr5.2:8262312-8262331 | MS.gene57163:intron | 55.0% | |
| GGAGCCAGGTCTGACAGAAT+TGG | - | chr5.2:8264164-8264183 | MS.gene57163:intron | 55.0% | |
| GTGGCCTCAGATGCTTGATG+AGG | + | chr5.2:8265021-8265040 | None:intergenic | 55.0% | |
| GTGTCCTCCTCTCAAGGTCT+CGG | - | chr5.2:8262612-8262631 | MS.gene57163:intron | 55.0% | |
| TTCAACGGACAAGTCCAGCC+CGG | - | chr5.2:8263728-8263747 | MS.gene57163:intron | 55.0% | |
| TTTGCATTACCAGGGGAGCC+AGG | - | chr5.2:8264150-8264169 | MS.gene57163:intron | 55.0% | |
| ! | ATTGGCACCGAGACCTTGAG+AGG | + | chr5.2:8262622-8262641 | None:intergenic | 55.0% |
| ! | CTTGGAGTGTCCTCCTCTCA+AGG | - | chr5.2:8262606-8262625 | MS.gene57163:intron | 55.0% |
| ! | GCAGTTTTTCCCCACTGCTG+AGG | - | chr5.2:8263513-8263532 | MS.gene57163:intron | 55.0% |
| !! | GAGCTTGCTACGAGCAGTTC+AGG | - | chr5.2:8260476-8260495 | MS.gene57163:CDS | 55.0% |
| !! | GTGGTGTTGACTTGGGACCT+TGG | - | chr5.2:8262588-8262607 | MS.gene57163:intron | 55.0% |
| AGGGATGTTGTCGCGCGCAA+CGG | - | chr5.2:8265053-8265072 | MS.gene57163:CDS | 60.0% | |
| CATCTTACCTTCGTCCGGGC+TGG | + | chr5.2:8263745-8263764 | None:intergenic | 60.0% | |
| CCAGCAGCATGACGAACGCA+CGG | - | chr5.2:8265089-8265108 | MS.gene57163:CDS | 60.0% | |
| CGCGCGACAACATCCCTACA+TGG | + | chr5.2:8265050-8265069 | None:intergenic | 60.0% | |
| GTCTTCGAAGGTGGAGGAGC+GGG | + | chr5.2:8260257-8260276 | None:intergenic | 60.0% | |
| CCGTGCGTTCGTCATGCTGC+TGG | + | chr5.2:8265092-8265111 | None:intergenic | 65.0% | |
| CGACCTGGAACCCTGGAGCT+GGG | + | chr5.2:8264774-8264793 | None:intergenic | 65.0% | |
| GACAAGTCCAGCCCGGACGA+AGG | - | chr5.2:8263735-8263754 | MS.gene57163:intron | 65.0% | |
| GATCCCAGCTCCAGGGTTCC+AGG | - | chr5.2:8264768-8264787 | MS.gene57163:intron | 65.0% | |
| TCGACCTGGAACCCTGGAGC+TGG | + | chr5.2:8264775-8264794 | None:intergenic | 65.0% | |
| TCTGTCAGACCTGGCTCCCC+TGG | + | chr5.2:8264162-8264181 | None:intergenic | 65.0% | |
| ! | GGCACCGAGACCTTGAGAGG+AGG | + | chr5.2:8262619-8262638 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 8260248 | 8265272 | 8260248 | ID=MS.gene57163 |
| chr5.2 | mRNA | 8260248 | 8265272 | 8260248 | ID=MS.gene57163.t1;Parent=MS.gene57163 |
| chr5.2 | exon | 8264898 | 8265272 | 8264898 | ID=MS.gene57163.t1.exon1;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8264898 | 8265272 | 8264898 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8264040 | 8264141 | 8264040 | ID=MS.gene57163.t1.exon2;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8264040 | 8264141 | 8264040 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8263899 | 8263955 | 8263899 | ID=MS.gene57163.t1.exon3;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8263899 | 8263955 | 8263899 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8263282 | 8263347 | 8263282 | ID=MS.gene57163.t1.exon4;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8263282 | 8263347 | 8263282 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8262117 | 8262293 | 8262117 | ID=MS.gene57163.t1.exon5;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8262117 | 8262293 | 8262117 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8261917 | 8262003 | 8261917 | ID=MS.gene57163.t1.exon6;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8261917 | 8262003 | 8261917 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8261764 | 8261828 | 8261764 | ID=MS.gene57163.t1.exon7;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8261764 | 8261828 | 8261764 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8261620 | 8261696 | 8261620 | ID=MS.gene57163.t1.exon8;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8261620 | 8261696 | 8261620 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8261499 | 8261545 | 8261499 | ID=MS.gene57163.t1.exon9;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8261499 | 8261545 | 8261499 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8261285 | 8261415 | 8261285 | ID=MS.gene57163.t1.exon10;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8261285 | 8261415 | 8261285 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8260869 | 8260938 | 8260869 | ID=MS.gene57163.t1.exon11;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8260869 | 8260938 | 8260869 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| chr5.2 | exon | 8260248 | 8260757 | 8260248 | ID=MS.gene57163.t1.exon12;Parent=MS.gene57163.t1 |
| chr5.2 | CDS | 8260248 | 8260757 | 8260248 | ID=cds.MS.gene57163.t1;Parent=MS.gene57163.t1 |
| Gene Sequence |
| Protein sequence |
