Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57197.t1 | XP_003611628.1 | 98 | 293 | 6 | 0 | 1 | 293 | 1 | 293 | 1.30E-164 | 589 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57197.t1 | Q8VZJ7 | 64.2 | 279 | 99 | 1 | 11 | 289 | 7 | 284 | 1.3e-101 | 370.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57197.t1 | G7K3W6 | 98.0 | 293 | 6 | 0 | 1 | 293 | 1 | 293 | 9.0e-165 | 589.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57197 | MS.gene56734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57197.t1 | MTR_5g016090 | 97.952 | 293 | 6 | 0 | 1 | 293 | 1 | 293 | 0.0 | 598 |
| MS.gene57197.t1 | MTR_4g095370 | 72.297 | 296 | 80 | 2 | 1 | 294 | 1 | 296 | 1.08e-159 | 446 |
| MS.gene57197.t1 | MTR_5g016090 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 3.48e-119 | 342 |
| MS.gene57197.t1 | MTR_4g095370 | 68.599 | 207 | 63 | 2 | 1 | 205 | 1 | 207 | 2.26e-99 | 290 |
| MS.gene57197.t1 | MTR_4g095370 | 68.447 | 206 | 63 | 2 | 1 | 204 | 1 | 206 | 7.97e-99 | 289 |
| MS.gene57197.t1 | MTR_5g022960 | 46.154 | 208 | 105 | 4 | 84 | 287 | 79 | 283 | 7.76e-57 | 185 |
| MS.gene57197.t1 | MTR_8g074810 | 44.498 | 209 | 107 | 5 | 84 | 287 | 68 | 272 | 4.63e-56 | 182 |
| MS.gene57197.t1 | MTR_8g074890 | 43.269 | 208 | 111 | 4 | 84 | 287 | 67 | 271 | 2.46e-54 | 178 |
| MS.gene57197.t1 | MTR_8g074880 | 43.128 | 211 | 105 | 5 | 84 | 286 | 116 | 319 | 4.86e-53 | 176 |
| MS.gene57197.t1 | MTR_3g114670 | 36.170 | 282 | 152 | 7 | 13 | 286 | 12 | 273 | 9.53e-52 | 171 |
| MS.gene57197.t1 | MTR_8g074830 | 42.308 | 208 | 113 | 4 | 84 | 287 | 71 | 275 | 2.52e-51 | 170 |
| MS.gene57197.t1 | MTR_6g009440 | 42.439 | 205 | 110 | 5 | 86 | 286 | 54 | 254 | 9.57e-49 | 164 |
| MS.gene57197.t1 | MTR_2g020800 | 41.778 | 225 | 118 | 6 | 69 | 286 | 28 | 246 | 9.67e-49 | 164 |
| MS.gene57197.t1 | MTR_2g020800 | 42.291 | 227 | 116 | 7 | 69 | 286 | 28 | 248 | 5.69e-48 | 162 |
| MS.gene57197.t1 | MTR_1g116810 | 41.627 | 209 | 117 | 4 | 84 | 291 | 76 | 280 | 2.46e-47 | 160 |
| MS.gene57197.t1 | MTR_4g118560 | 40.359 | 223 | 118 | 6 | 73 | 286 | 27 | 243 | 1.53e-46 | 158 |
| MS.gene57197.t1 | MTR_8g074870 | 41.981 | 212 | 94 | 6 | 84 | 287 | 29 | 219 | 4.49e-46 | 155 |
| MS.gene57197.t1 | MTR_3g114610 | 41.827 | 208 | 107 | 7 | 84 | 286 | 97 | 295 | 5.40e-44 | 152 |
| MS.gene57197.t1 | MTR_3g114590 | 41.148 | 209 | 106 | 5 | 84 | 286 | 65 | 262 | 1.50e-43 | 157 |
| MS.gene57197.t1 | MTR_3g114590 | 36.486 | 222 | 114 | 10 | 68 | 286 | 262 | 459 | 1.67e-29 | 117 |
| MS.gene57197.t1 | MTR_5g022960 | 39.062 | 128 | 75 | 2 | 84 | 211 | 79 | 203 | 2.89e-23 | 95.1 |
| MS.gene57197.t1 | MTR_6g053720 | 24.046 | 262 | 166 | 7 | 27 | 284 | 4 | 236 | 3.27e-18 | 83.2 |
| MS.gene57197.t1 | MTR_3g051200 | 37.692 | 130 | 69 | 5 | 98 | 223 | 25 | 146 | 4.23e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57197.t1 | AT4G33910 | 64.158 | 279 | 99 | 1 | 11 | 289 | 7 | 284 | 3.31e-132 | 377 |
| MS.gene57197.t1 | AT2G23096 | 54.839 | 279 | 115 | 4 | 13 | 291 | 6 | 273 | 8.59e-109 | 317 |
| MS.gene57197.t1 | AT1G20270 | 37.676 | 284 | 153 | 9 | 10 | 286 | 14 | 280 | 1.58e-56 | 184 |
| MS.gene57197.t1 | AT5G66060 | 42.308 | 208 | 113 | 4 | 84 | 287 | 79 | 283 | 1.43e-52 | 174 |
| MS.gene57197.t1 | AT3G28490 | 44.175 | 206 | 106 | 4 | 86 | 286 | 35 | 236 | 1.60e-52 | 174 |
| MS.gene57197.t1 | AT3G28480 | 42.439 | 205 | 110 | 4 | 86 | 286 | 59 | 259 | 3.32e-50 | 168 |
| MS.gene57197.t1 | AT4G35810 | 40.385 | 208 | 115 | 5 | 83 | 285 | 80 | 283 | 6.11e-49 | 164 |
| MS.gene57197.t1 | AT4G35810 | 40.385 | 208 | 115 | 5 | 83 | 285 | 80 | 283 | 6.11e-49 | 164 |
| MS.gene57197.t1 | AT2G17720 | 41.346 | 208 | 111 | 5 | 84 | 285 | 81 | 283 | 1.26e-48 | 164 |
| MS.gene57197.t1 | AT5G18900 | 41.667 | 216 | 117 | 5 | 77 | 286 | 31 | 243 | 2.70e-46 | 158 |
| MS.gene57197.t1 | AT2G43080 | 38.028 | 213 | 127 | 3 | 78 | 289 | 72 | 280 | 8.88e-46 | 156 |
| MS.gene57197.t1 | AT3G06300 | 40.865 | 208 | 112 | 5 | 86 | 286 | 41 | 244 | 2.31e-45 | 155 |
| MS.gene57197.t1 | AT3G28480 | 39.713 | 209 | 118 | 4 | 86 | 286 | 59 | 267 | 2.59e-42 | 148 |
| MS.gene57197.t1 | AT4G35820 | 36.041 | 197 | 95 | 6 | 83 | 270 | 88 | 262 | 1.06e-33 | 124 |
| MS.gene57197.t1 | AT5G66060 | 40.000 | 145 | 82 | 3 | 84 | 228 | 79 | 218 | 9.61e-28 | 108 |
| MS.gene57197.t1 | AT1G20270 | 31.034 | 203 | 126 | 5 | 9 | 211 | 13 | 201 | 8.95e-25 | 99.0 |
| MS.gene57197.t1 | AT1G20270 | 31.034 | 203 | 126 | 5 | 9 | 211 | 13 | 201 | 8.95e-25 | 99.0 |
| MS.gene57197.t1 | AT4G25600 | 28.704 | 216 | 123 | 5 | 74 | 286 | 50 | 237 | 3.44e-18 | 83.2 |
| MS.gene57197.t1 | AT4G25600 | 28.141 | 199 | 112 | 5 | 91 | 286 | 6 | 176 | 1.88e-14 | 71.6 |
| MS.gene57197.t1 | AT4G25600 | 28.358 | 201 | 109 | 6 | 91 | 286 | 15 | 185 | 2.15e-14 | 71.6 |
| MS.gene57197.t1 | AT4G25600 | 28.141 | 199 | 112 | 5 | 91 | 286 | 3 | 173 | 2.19e-14 | 71.2 |
Find 71 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTACTTCGATTCCATTTC+AGG | 0.136860 | 5.3:-8895914 | MS.gene57197:intron |
| TGTTCTGCACTTGCAAAATT+AGG | 0.198134 | 5.3:+8895131 | None:intergenic |
| AACATGGTCTCCCCACCTTC+TGG | 0.302297 | 5.3:+8891767 | None:intergenic |
| GCATTCAATCCCGCGGAATA+TGG | 0.304254 | 5.3:-8893394 | MS.gene57197:CDS |
| GGGAGCTGCCCCGTTATTAA+AGG | 0.306596 | 5.3:-8890556 | MS.gene57197:CDS |
| TTCTTTCTCGCTGGTTTCTT+CGG | 0.322163 | 5.3:-8896180 | MS.gene57197:CDS |
| CACTTCTCCCCTTTAATAAC+GGG | 0.340000 | 5.3:+8890547 | None:intergenic |
| ATATAACATCCTCCGCTATA+AGG | 0.351944 | 5.3:-8893446 | MS.gene57197:CDS |
| TTACCCTTTGGCTCTCTTGT+GGG | 0.364054 | 5.3:+8893371 | None:intergenic |
| AAGAATTCACAAACCTGAAA+TGG | 0.366184 | 5.3:+8895901 | None:intergenic |
| CTTCGTTCTCAAGCTCCAAT+TGG | 0.383586 | 5.3:+8896242 | None:intergenic |
| ACCGGGTCAATTGTACCATT+AGG | 0.395671 | 5.3:+8891542 | None:intergenic |
| CCGGGTCAATTGTACCATTA+GGG | 0.398163 | 5.3:+8891543 | None:intergenic |
| TCGCGTAACATCAATCTTGA+TGG | 0.411469 | 5.3:+8895068 | None:intergenic |
| CAGTTTCTTCCATTACTCTC+AGG | 0.413346 | 5.3:-8896154 | MS.gene57197:intron |
| TGCATCTTCTTCTTTCTCGC+TGG | 0.415401 | 5.3:-8896189 | MS.gene57197:CDS |
| CGAAAACGGTTAAAGCCAAT+TGG | 0.420066 | 5.3:-8896257 | MS.gene57197:CDS |
| GAAAGAAGAAGATGCATAAG+AGG | 0.422059 | 5.3:+8896196 | None:intergenic |
| CCACTTCTCCCCTTTAATAA+CGG | 0.432353 | 5.3:+8890546 | None:intergenic |
| GTTACCTCTCCATGAGTCTT+GGG | 0.445486 | 5.3:+8894248 | None:intergenic |
| GGAGCTGCCCCGTTATTAAA+GGG | 0.447230 | 5.3:-8890555 | MS.gene57197:CDS |
| CTTACCCTTTGGCTCTCTTG+TGG | 0.448126 | 5.3:+8893370 | None:intergenic |
| GGGTTGCTACAAAGTGGATA+AGG | 0.448780 | 5.3:-8890525 | MS.gene57197:CDS |
| CAGCGCTTCTGAGGACAAAA+CGG | 0.463571 | 5.3:-8894318 | MS.gene57197:CDS |
| TGTTACCTCTCCATGAGTCT+TGG | 0.484955 | 5.3:+8894247 | None:intergenic |
| GGTTGCTACAAAGTGGATAA+GGG | 0.497654 | 5.3:-8890524 | MS.gene57197:CDS |
| AATCCAAATGAAAGCGAAAA+CGG | 0.504969 | 5.3:-8896271 | None:intergenic |
| TCTTGTGGGCCATATTCCGC+GGG | 0.507942 | 5.3:+8893385 | None:intergenic |
| GAGCACCGTTTGTTGCATGC+TGG | 0.515078 | 5.3:-8895955 | MS.gene57197:CDS |
| AGCGCTTCTGAGGACAAAAC+GGG | 0.516147 | 5.3:-8894317 | MS.gene57197:CDS |
| TTGTTGCATGCTGGAGAGTC+CGG | 0.518286 | 5.3:-8895946 | MS.gene57197:CDS |
| TAACAGATGTTCCAGAAGGT+GGG | 0.520217 | 5.3:-8891778 | MS.gene57197:CDS |
| TGGCGTGAGAGTGAGATTGC+TGG | 0.520269 | 5.3:-8896001 | MS.gene57197:CDS |
| AACATCCTCCGCTATAAGGT+TGG | 0.521133 | 5.3:-8893442 | MS.gene57197:CDS |
| CCCTAATGGTACAATTGACC+CGG | 0.524529 | 5.3:-8891543 | MS.gene57197:intron |
| CCGTTATTAAAGGGGAGAAG+TGG | 0.527804 | 5.3:-8890546 | MS.gene57197:CDS |
| TAATAACGGGGCAGCTCCCA+TGG | 0.528613 | 5.3:+8890560 | None:intergenic |
| TTAACAGATGTTCCAGAAGG+TGG | 0.530944 | 5.3:-8891779 | MS.gene57197:CDS |
| AGAAACAGAGGAAGGTACAA+AGG | 0.544545 | 5.3:-8895042 | MS.gene57197:CDS |
| ACTCTCCAGCATGCAACAAA+CGG | 0.553944 | 5.3:+8895950 | None:intergenic |
| AACAGATGTTCCAGAAGGTG+GGG | 0.556390 | 5.3:-8891777 | MS.gene57197:CDS |
| CGAAGTAATGAAATTATCAC+CGG | 0.556524 | 5.3:+8895927 | None:intergenic |
| CTCTTGTGGGCCATATTCCG+CGG | 0.560435 | 5.3:+8893384 | None:intergenic |
| CGTTATTAAAGGGGAGAAGT+GGG | 0.569773 | 5.3:-8890545 | MS.gene57197:CDS |
| CTTTGGCAGACATCACTCCA+TGG | 0.570191 | 5.3:-8890577 | MS.gene57197:intron |
| ATGTGATAGCATAATTGAGA+TGG | 0.580962 | 5.3:-8895108 | MS.gene57197:CDS |
| ATCAAGCCTCAGAAGGGAGA+CGG | 0.584518 | 5.3:-8891587 | MS.gene57197:CDS |
| ATGGCCCACAAGAGAGCCAA+AGG | 0.587118 | 5.3:-8893375 | MS.gene57197:CDS |
| TGTGTAGAATGGGTCGAACA+TGG | 0.592846 | 5.3:-8891648 | MS.gene57197:intron |
| GAAACAGAGGAAGGTACAAA+GGG | 0.602245 | 5.3:-8895041 | MS.gene57197:CDS |
| AGAAGTCCGTCTCCCTTCTG+AGG | 0.603684 | 5.3:+8891581 | None:intergenic |
| TTAGGAAAGTATAAAGCGCG+TGG | 0.604523 | 5.3:+8895149 | None:intergenic |
| TTTGGCAGACATCACTCCAT+GGG | 0.605744 | 5.3:-8890576 | MS.gene57197:intron |
| AGAAGTGGGTTGCTACAAAG+TGG | 0.608156 | 5.3:-8890531 | MS.gene57197:CDS |
| TATGTTTATCAGCGCTTCTG+AGG | 0.608404 | 5.3:-8894327 | MS.gene57197:CDS |
| TTTGTCCAACCTTATAGCGG+AGG | 0.613087 | 5.3:+8893437 | None:intergenic |
| ATCAAGATTGATGTTACGCG+AGG | 0.628769 | 5.3:-8895066 | MS.gene57197:CDS |
| TATTTAACAGATGTTCCAGA+AGG | 0.629276 | 5.3:-8891782 | MS.gene57197:CDS |
| AAAATCGGTGAAGGATGAGA+CGG | 0.638103 | 5.3:-8895977 | MS.gene57197:CDS |
| TGGCCCACAAGAGAGCCAAA+GGG | 0.641180 | 5.3:-8893374 | MS.gene57197:intron |
| CGCGAGGGAGAAACAGAGGA+AGG | 0.642901 | 5.3:-8895050 | MS.gene57197:CDS |
| TAGCATAATTGAGATGGCAA+AGG | 0.646432 | 5.3:-8895102 | MS.gene57197:CDS |
| TAGGAAAGTATAAAGCGCGT+GGG | 0.646893 | 5.3:+8895150 | None:intergenic |
| ATGCATAAGAGGAAAACAGA+AGG | 0.650557 | 5.3:+8896207 | None:intergenic |
| CTATGATGCATTCAATCCCG+CGG | 0.659764 | 5.3:-8893401 | MS.gene57197:CDS |
| GAGCTGCCCCGTTATTAAAG+GGG | 0.661369 | 5.3:-8890554 | MS.gene57197:CDS |
| GTACAAAGGGAATCAGAACA+AGG | 0.662305 | 5.3:-8895028 | MS.gene57197:intron |
| TCAAGATTGATGTTACGCGA+GGG | 0.665505 | 5.3:-8895065 | MS.gene57197:CDS |
| AATTCCCAAGACTCATGGAG+AGG | 0.667424 | 5.3:-8894252 | MS.gene57197:intron |
| GTTACGCGAGGGAGAAACAG+AGG | 0.681875 | 5.3:-8895054 | MS.gene57197:CDS |
| ACTTCTCCCCTTTAATAACG+GGG | 0.700100 | 5.3:+8890548 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGAAATTCAAAAAATA+TGG | - | chr5.3:8893956-8893975 | MS.gene57197:intron | 10.0% |
| !! | AGTTCAATTAAAAAAAATAA+AGG | + | chr5.3:8893539-8893558 | None:intergenic | 10.0% |
| !!! | AATGTAAATGTAAAATTTTA+AGG | + | chr5.3:8894748-8894767 | None:intergenic | 10.0% |
| !!! | ATAACAATTTATTCAAATTT+TGG | + | chr5.3:8891298-8891317 | None:intergenic | 10.0% |
| !!! | ATTTGTTTTCAAATAATTAT+TGG | - | chr5.3:8891167-8891186 | MS.gene57197:intron | 10.0% |
| !!! | ATTTTTGAGTTTAATAAAAT+AGG | - | chr5.3:8893811-8893830 | MS.gene57197:intron | 10.0% |
| !!! | ATTTTTTTATTTTGTTTTAC+TGG | - | chr5.3:8890694-8890713 | MS.gene57197:intron | 10.0% |
| !!! | TTTTTGAGTTTAATAAAATA+GGG | - | chr5.3:8893812-8893831 | MS.gene57197:intron | 10.0% |
| !! | ACTTACAAATAAATTCTAAT+TGG | - | chr5.3:8894369-8894388 | MS.gene57197:intron | 15.0% |
| !! | TTTATAAATGAATCGATATA+TGG | + | chr5.3:8894681-8894700 | None:intergenic | 15.0% |
| !!! | AAAAAGTTCGATTTTAAAAT+AGG | - | chr5.3:8893782-8893801 | MS.gene57197:intron | 15.0% |
| !!! | AAAAGTTCGATTTTAAAATA+GGG | - | chr5.3:8893783-8893802 | MS.gene57197:intron | 15.0% |
| !!! | AATTTTCATTTATAAATTCC+AGG | - | chr5.3:8894090-8894109 | MS.gene57197:intron | 15.0% |
| !!! | ATGCTAATGATTATTAATTT+TGG | + | chr5.3:8894647-8894666 | None:intergenic | 15.0% |
| !!! | GAATAAATTGTTATTGTTTT+GGG | - | chr5.3:8891304-8891323 | MS.gene57197:intron | 15.0% |
| !!! | GTGTTTTATAAATTTTGATT+AGG | - | chr5.3:8891228-8891247 | MS.gene57197:intron | 15.0% |
| !!! | TGAATAAATTGTTATTGTTT+TGG | - | chr5.3:8891303-8891322 | MS.gene57197:intron | 15.0% |
| !!! | TTATAAATTTTGATTAGGAT+CGG | - | chr5.3:8891233-8891252 | MS.gene57197:intron | 15.0% |
| !!! | TTTTGAGTTTAATAAAATAG+GGG | - | chr5.3:8893813-8893832 | MS.gene57197:intron | 15.0% |
| !! | AAAATAAAGTAGAGAAAATG+AGG | - | chr5.3:8895806-8895825 | MS.gene57197:intron | 20.0% |
| !! | AAAATCAAAAAGAACTTGAT+TGG | + | chr5.3:8893231-8893250 | None:intergenic | 20.0% |
| !! | ACAAGAATAAAAATACTAAC+CGG | + | chr5.3:8895244-8895263 | None:intergenic | 20.0% |
| !! | ACTGTGATTTAATCAAAAAT+TGG | - | chr5.3:8891826-8891845 | MS.gene57197:intron | 20.0% |
| !! | CAATCTTTCTATATAATCTT+TGG | - | chr5.3:8896171-8896190 | MS.gene57197:CDS | 20.0% |
| !! | GCATTACAATTAAAACATAA+AGG | - | chr5.3:8893003-8893022 | MS.gene57197:intron | 20.0% |
| !! | TAAAGGGATTATTATTAACA+AGG | + | chr5.3:8893858-8893877 | None:intergenic | 20.0% |
| !! | TTAATCAAAAATTGGAGATA+CGG | - | chr5.3:8891834-8891853 | MS.gene57197:intron | 20.0% |
| !! | TTCATGAGTTTGATAAAATA+GGG | + | chr5.3:8893510-8893529 | None:intergenic | 20.0% |
| !! | TTTACATTTACATTCCTTTA+AGG | - | chr5.3:8894754-8894773 | MS.gene57197:intron | 20.0% |
| !! | TTTCATGAGTTTGATAAAAT+AGG | + | chr5.3:8893511-8893530 | None:intergenic | 20.0% |
| !!! | AAACATTTTAGTTCTGTTTT+GGG | + | chr5.3:8892741-8892760 | None:intergenic | 20.0% |
| !!! | AAAGTTCGATTTTAAAATAG+GGG | - | chr5.3:8893784-8893803 | MS.gene57197:intron | 20.0% |
| !!! | AATATGAGATGTTTTCAATA+TGG | - | chr5.3:8895867-8895886 | MS.gene57197:intron | 20.0% |
| !!! | ATCAATTTAAAGTGAATCAT+GGG | + | chr5.3:8892305-8892324 | None:intergenic | 20.0% |
| !!! | ATTTTCAATGTTACTTGAAA+AGG | - | chr5.3:8891497-8891516 | MS.gene57197:intron | 20.0% |
| !!! | ATTTTTTATTCGCTTTTTTG+TGG | - | chr5.3:8892269-8892288 | MS.gene57197:intron | 20.0% |
| !!! | CTGTATAATTTGCATATTTA+AGG | - | chr5.3:8895462-8895481 | MS.gene57197:intron | 20.0% |
| !!! | GGTTTTGTAACAAATTTAAA+TGG | - | chr5.3:8891800-8891819 | MS.gene57197:CDS | 20.0% |
| !!! | TAAACATTTTAGTTCTGTTT+TGG | + | chr5.3:8892742-8892761 | None:intergenic | 20.0% |
| !!! | TTGGTTCAATCATTTAATTT+TGG | - | chr5.3:8891025-8891044 | MS.gene57197:intron | 20.0% |
| !!! | TTTGAGTTTAATAAAATAGG+GGG | - | chr5.3:8893814-8893833 | MS.gene57197:intron | 20.0% |
| !!! | TTTTTTTTTTTGAGCTTACA+AGG | - | chr5.3:8895559-8895578 | MS.gene57197:intron | 20.0% |
| ! | AAATAGAAGAGCAAACATAA+AGG | + | chr5.3:8892023-8892042 | None:intergenic | 25.0% |
| ! | AATAATGTTAGGTAAGAGAA+AGG | - | chr5.3:8895406-8895425 | MS.gene57197:intron | 25.0% |
| ! | ACAATTAAAACATAAAGGCA+AGG | - | chr5.3:8893008-8893027 | MS.gene57197:intron | 25.0% |
| ! | ACATTATTTCATTACTGGTA+TGG | + | chr5.3:8895394-8895413 | None:intergenic | 25.0% |
| ! | ACCAGTAATGAAATAATGTT+AGG | - | chr5.3:8895395-8895414 | MS.gene57197:intron | 25.0% |
| ! | ACCTAACATTATTTCATTAC+TGG | + | chr5.3:8895399-8895418 | None:intergenic | 25.0% |
| ! | ACTTATAAATGTATTGAAGC+TGG | - | chr5.3:8891925-8891944 | MS.gene57197:intron | 25.0% |
| ! | ATAATGTTAGGTAAGAGAAA+GGG | - | chr5.3:8895407-8895426 | MS.gene57197:intron | 25.0% |
| ! | ATTGTCTTTAGATTCACTAT+TGG | + | chr5.3:8893643-8893662 | None:intergenic | 25.0% |
| ! | CAAGAATAAAAATACTAACC+GGG | + | chr5.3:8895243-8895262 | None:intergenic | 25.0% |
| ! | CTCATGTATTGAAACATTAA+AGG | + | chr5.3:8892232-8892251 | None:intergenic | 25.0% |
| ! | CTTATAAATGTATTGAAGCT+GGG | - | chr5.3:8891926-8891945 | MS.gene57197:intron | 25.0% |
| ! | CTTTAATGTTTCAATACATG+AGG | - | chr5.3:8892230-8892249 | MS.gene57197:intron | 25.0% |
| ! | GAGTAGAATAATTAACTACA+TGG | - | chr5.3:8891779-8891798 | MS.gene57197:CDS | 25.0% |
| ! | GCATTATTATTGTGTAGAAT+GGG | - | chr5.3:8895107-8895126 | MS.gene57197:CDS | 25.0% |
| ! | TAGAGTTCATCTTCTATAAT+TGG | - | chr5.3:8893876-8893895 | MS.gene57197:intron | 25.0% |
| ! | TATAGAAGATGAACTCTAAA+GGG | + | chr5.3:8893874-8893893 | None:intergenic | 25.0% |
| ! | TCATGAGTTTGATAAAATAG+GGG | + | chr5.3:8893509-8893528 | None:intergenic | 25.0% |
| ! | TCTATATGACAAGATATGAT+TGG | - | chr5.3:8893133-8893152 | MS.gene57197:intron | 25.0% |
| ! | TGCAACAGATGTAAAAATAT+AGG | + | chr5.3:8893569-8893588 | None:intergenic | 25.0% |
| ! | TGCATTATTATTGTGTAGAA+TGG | - | chr5.3:8895106-8895125 | MS.gene57197:CDS | 25.0% |
| ! | TGGTATAAAATGTTGTCAAA+TGG | - | chr5.3:8891337-8891356 | MS.gene57197:intron | 25.0% |
| ! | TTATAGAAGATGAACTCTAA+AGG | + | chr5.3:8893875-8893894 | None:intergenic | 25.0% |
| ! | TTGTCTTTAGATTCACTATT+GGG | + | chr5.3:8893642-8893661 | None:intergenic | 25.0% |
| ! | TTTGACACTAAACTAAAGAT+AGG | + | chr5.3:8893689-8893708 | None:intergenic | 25.0% |
| !! | AAAACTCGTAACTTGTAATT+TGG | - | chr5.3:8894344-8894363 | MS.gene57197:intron | 25.0% |
| !! | AAAGTAGATTTTACCTCAAA+AGG | + | chr5.3:8895025-8895044 | None:intergenic | 25.0% |
| !! | AATAGACTTAATTACGCTTT+TGG | - | chr5.3:8893481-8893500 | MS.gene57197:intron | 25.0% |
| !! | AATTGATGATTATACTTACG+AGG | - | chr5.3:8892318-8892337 | MS.gene57197:intron | 25.0% |
| !! | ACTCACAATTTCAAGATTTT+AGG | - | chr5.3:8895506-8895525 | MS.gene57197:intron | 25.0% |
| !! | ATAATGTTGTGGATTTTAGA+AGG | + | chr5.3:8892352-8892371 | None:intergenic | 25.0% |
| !! | CATCAATTTAAAGTGAATCA+TGG | + | chr5.3:8892306-8892325 | None:intergenic | 25.0% |
| !! | TTCAATGAAATGCTTTTACT+GGG | - | chr5.3:8895979-8895998 | MS.gene57197:CDS | 25.0% |
| !! | TTGCATATTTAAGGTTTGAA+TGG | - | chr5.3:8895471-8895490 | MS.gene57197:intron | 25.0% |
| !! | TTTACATGATGTTTTATGCT+AGG | - | chr5.3:8890913-8890932 | MS.gene57197:intron | 25.0% |
| !!! | AACATTTTAGTTCTGTTTTG+GGG | + | chr5.3:8892740-8892759 | None:intergenic | 25.0% |
| !!! | AAGTTCGATTTTAAAATAGG+GGG | - | chr5.3:8893785-8893804 | MS.gene57197:intron | 25.0% |
| !!! | AATTGAAAACCTCTTTTTTC+AGG | - | chr5.3:8893256-8893275 | MS.gene57197:intron | 25.0% |
| !!! | GTGTTTTTTGCACTAAAAAA+TGG | - | chr5.3:8893605-8893624 | MS.gene57197:intron | 25.0% |
| !!! | TATAATTTTGAGGATTGCAT+TGG | - | chr5.3:8895148-8895167 | MS.gene57197:CDS | 25.0% |
| !!! | TTTTTTTAGTGATATTCTCC+TGG | + | chr5.3:8894111-8894130 | None:intergenic | 25.0% |
| AACAATTTGTGAAGGTAGTA+AGG | - | chr5.3:8892781-8892800 | MS.gene57197:intron | 30.0% | |
| AACTAAAGATAGGTGAACTT+TGG | + | chr5.3:8893679-8893698 | None:intergenic | 30.0% | |
| AAGAAAAAACCTGAGAGTAA+TGG | + | chr5.3:8890623-8890642 | None:intergenic | 30.0% | |
| AAGAATTCACAAACCTGAAA+TGG | + | chr5.3:8890867-8890886 | None:intergenic | 30.0% | |
| AAGCTCCTGATATGATTTAA+TGG | + | chr5.3:8892390-8892409 | None:intergenic | 30.0% | |
| AATCCTTGAGTATGAGTATT+AGG | - | chr5.3:8893193-8893212 | MS.gene57197:intron | 30.0% | |
| AATTCATCTAGTAAGATGAG+TGG | + | chr5.3:8894303-8894322 | None:intergenic | 30.0% | |
| ACAAAAATTACGGTCGTAAA+TGG | + | chr5.3:8893075-8893094 | None:intergenic | 30.0% | |
| ACAACATTATGTCATAGTGA+TGG | - | chr5.3:8892362-8892381 | MS.gene57197:intron | 30.0% | |
| ACAAGAACTAAGCTATTGTT+TGG | - | chr5.3:8891885-8891904 | MS.gene57197:intron | 30.0% | |
| ACTTGAAAACTTACACACAT+AGG | - | chr5.3:8894224-8894243 | MS.gene57197:intron | 30.0% | |
| AGAACTTGATTGGAGATAAA+AGG | + | chr5.3:8893221-8893240 | None:intergenic | 30.0% | |
| AGAGATTAAAGACAAGAGAA+GGG | - | chr5.3:8895671-8895690 | MS.gene57197:intron | 30.0% | |
| ATCACTATGACATAATGTTG+TGG | + | chr5.3:8892363-8892382 | None:intergenic | 30.0% | |
| ATCCTTGAGTATGAGTATTA+GGG | - | chr5.3:8893194-8893213 | MS.gene57197:intron | 30.0% | |
| ATGAAAGACATGTTTGTAGA+TGG | - | chr5.3:8892973-8892992 | MS.gene57197:intron | 30.0% | |
| ATGAGTTTGATAAAATAGGG+GGG | + | chr5.3:8893507-8893526 | None:intergenic | 30.0% | |
| ATGTGATAGCATAATTGAGA+TGG | - | chr5.3:8891657-8891676 | MS.gene57197:intron | 30.0% | |
| ATGTTATATGCCTGAAACAT+GGG | + | chr5.3:8893308-8893327 | None:intergenic | 30.0% | |
| ATTTCATTACTGGTATGGTA+TGG | + | chr5.3:8895389-8895408 | None:intergenic | 30.0% | |
| CAAACATGTCTTTCATGTAA+TGG | + | chr5.3:8892969-8892988 | None:intergenic | 30.0% | |
| CATGAGTTTGATAAAATAGG+GGG | + | chr5.3:8893508-8893527 | None:intergenic | 30.0% | |
| CGAAGTAATGAAATTATCAC+CGG | + | chr5.3:8890841-8890860 | None:intergenic | 30.0% | |
| GATGGTTTCTAAATTATCTG+AGG | - | chr5.3:8893278-8893297 | MS.gene57197:intron | 30.0% | |
| GCAGCAAATATGAAAATAGA+GGG | - | chr5.3:8893756-8893775 | MS.gene57197:intron | 30.0% | |
| GCAGTAATAGTATACATTGA+CGG | + | chr5.3:8893167-8893186 | None:intergenic | 30.0% | |
| GTAATGTTAGTGTAATCAGT+TGG | - | chr5.3:8891006-8891025 | MS.gene57197:intron | 30.0% | |
| TAAAGACCAACAATTTGTGA+AGG | - | chr5.3:8892773-8892792 | MS.gene57197:intron | 30.0% | |
| TAGAGATTAAAGACAAGAGA+AGG | - | chr5.3:8895670-8895689 | MS.gene57197:intron | 30.0% | |
| TATTTAACAGATGTTCCAGA+AGG | - | chr5.3:8894983-8895002 | MS.gene57197:intron | 30.0% | |
| TGGTTCCATTAAATCATATC+AGG | - | chr5.3:8892382-8892401 | MS.gene57197:intron | 30.0% | |
| TGTCTTTAGATTCACTATTG+GGG | + | chr5.3:8893641-8893660 | None:intergenic | 30.0% | |
| TTAAAAATCAAGCCTCAGAA+GGG | - | chr5.3:8895172-8895191 | MS.gene57197:intron | 30.0% | |
| TTACTACCTTCACAAATTGT+TGG | + | chr5.3:8892782-8892801 | None:intergenic | 30.0% | |
| TTGAAACATTAAAGGATCAC+TGG | + | chr5.3:8892224-8892243 | None:intergenic | 30.0% | |
| TTTAAAAATCAAGCCTCAGA+AGG | - | chr5.3:8895171-8895190 | MS.gene57197:intron | 30.0% | |
| ! | AATTGATTCTCTGGTAAACA+TGG | + | chr5.3:8893039-8893058 | None:intergenic | 30.0% |
| ! | ATTTTTGTCCAACCTTATAG+CGG | + | chr5.3:8893334-8893353 | None:intergenic | 30.0% |
| ! | CAATGTTACTTGAAAAGGAT+CGG | - | chr5.3:8891502-8891521 | MS.gene57197:intron | 30.0% |
| ! | CATATTTAAGGTTTGAATGG+AGG | - | chr5.3:8895474-8895493 | MS.gene57197:intron | 30.0% |
| ! | CTTCAATGAAATGCTTTTAC+TGG | - | chr5.3:8895978-8895997 | MS.gene57197:CDS | 30.0% |
| ! | GGCAAATGCTAATATGTTTT+AGG | - | chr5.3:8894390-8894409 | MS.gene57197:intron | 30.0% |
| ! | TTAGTTGAAATCAGCGTTTT+TGG | - | chr5.3:8890936-8890955 | MS.gene57197:intron | 30.0% |
| ! | TTGGATAGACTAGTCATATA+GGG | + | chr5.3:8894888-8894907 | None:intergenic | 30.0% |
| ! | TTTTACCTCAAAAGGAAACA+TGG | + | chr5.3:8895017-8895036 | None:intergenic | 30.0% |
| ! | TTTTATTCGTTGTTCCCTAA+TGG | - | chr5.3:8895208-8895227 | MS.gene57197:intron | 30.0% |
| ! | TTTTGTTCTAACTTACCCTT+TGG | + | chr5.3:8893409-8893428 | None:intergenic | 30.0% |
| ! | TTTTTGTGTGTGCCTATAAT+GGG | + | chr5.3:8893715-8893734 | None:intergenic | 30.0% |
| !! | AGGATTGTCTACTTTTAAGA+AGG | + | chr5.3:8894023-8894042 | None:intergenic | 30.0% |
| !! | AGTTTTGTGAATTGATTCTC+TGG | + | chr5.3:8893048-8893067 | None:intergenic | 30.0% |
| !! | ATTTTGGTACGTTAAACCAA+AGG | + | chr5.3:8891282-8891301 | None:intergenic | 30.0% |
| !! | CAGTAAAAGCATTTCATTGA+AGG | + | chr5.3:8895980-8895999 | None:intergenic | 30.0% |
| !! | GGATTGTCTACTTTTAAGAA+GGG | + | chr5.3:8894022-8894041 | None:intergenic | 30.0% |
| !! | TAAAGACAATCTCACTTTTG+AGG | - | chr5.3:8893653-8893672 | MS.gene57197:intron | 30.0% |
| !! | TATGTGTGTAAGTTTTCAAG+TGG | + | chr5.3:8894225-8894244 | None:intergenic | 30.0% |
| !! | TTCTATTTCTGTGAGTCTTA+AGG | + | chr5.3:8891861-8891880 | None:intergenic | 30.0% |
| !!! | ACATTTTAGTTCTGTTTTGG+GGG | + | chr5.3:8892739-8892758 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTACTCGTCTTCT+GGG | - | chr5.3:8895280-8895299 | MS.gene57197:intron | 30.0% |
| !!! | GTAAAATTTTAAGGTCCTCT+GGG | + | chr5.3:8894739-8894758 | None:intergenic | 30.0% |
| !!! | TGTAAAATTTTAAGGTCCTC+TGG | + | chr5.3:8894740-8894759 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTGTGCCTATAA+TGG | + | chr5.3:8893716-8893735 | None:intergenic | 30.0% |
| AAAATCTGTGATGTCAATCG+CGG | + | chr5.3:8891430-8891449 | None:intergenic | 35.0% | |
| AAACATTAAAGGATCACTGG+AGG | + | chr5.3:8892221-8892240 | None:intergenic | 35.0% | |
| AAGGATTGTAATTGGCAAGT+CGG | - | chr5.3:8895434-8895453 | MS.gene57197:intron | 35.0% | |
| AATCCAATTAGAGGCTTAGA+CGG | - | chr5.3:8894847-8894866 | MS.gene57197:intron | 35.0% | |
| ACAAAAATTCCCAAGACTCA+TGG | - | chr5.3:8892508-8892527 | MS.gene57197:intron | 35.0% | |
| ACCACGAGGAACAAAAATTA+CGG | + | chr5.3:8893085-8893104 | None:intergenic | 35.0% | |
| AGAAACCATCCTGAAAAAAG+AGG | + | chr5.3:8893268-8893287 | None:intergenic | 35.0% | |
| AGTGAGATTGCTGGAAAAAT+CGG | - | chr5.3:8890773-8890792 | MS.gene57197:intron | 35.0% | |
| ATAGGCACACACAAAAAACA+CGG | - | chr5.3:8893718-8893737 | MS.gene57197:intron | 35.0% | |
| ATATAACATCCTCCGCTATA+AGG | - | chr5.3:8893319-8893338 | MS.gene57197:intron | 35.0% | |
| ATGCATAAGAGGAAAACAGA+AGG | + | chr5.3:8890561-8890580 | None:intergenic | 35.0% | |
| CAATAGCATTTCTTCTCAAG+CGG | - | chr5.3:8892922-8892941 | MS.gene57197:intron | 35.0% | |
| CATTACTTCGATTCCATTTC+AGG | - | chr5.3:8890851-8890870 | MS.gene57197:intron | 35.0% | |
| CATTCTGAGTAAAAACCAGT+TGG | + | chr5.3:8894907-8894926 | None:intergenic | 35.0% | |
| CTGGAAATTGTTCGAAGTAA+CGG | - | chr5.3:8890713-8890732 | MS.gene57197:intron | 35.0% | |
| GAAAGAAGAAGATGCATAAG+AGG | + | chr5.3:8890572-8890591 | None:intergenic | 35.0% | |
| GACATGTTTGTAGATGGAAA+TGG | - | chr5.3:8892979-8892998 | MS.gene57197:intron | 35.0% | |
| GATGTTATATGCCTGAAACA+TGG | + | chr5.3:8893309-8893328 | None:intergenic | 35.0% | |
| GCGGATCGCATAAATAAAAA+AGG | + | chr5.3:8891411-8891430 | None:intergenic | 35.0% | |
| GGCAGCAAATATGAAAATAG+AGG | - | chr5.3:8893755-8893774 | MS.gene57197:intron | 35.0% | |
| TAAATGTATTGAAGCTGGGT+TGG | - | chr5.3:8891930-8891949 | MS.gene57197:intron | 35.0% | |
| TAGCATAATTGAGATGGCAA+AGG | - | chr5.3:8891663-8891682 | MS.gene57197:intron | 35.0% | |
| TCTATAGCATTACTGCATAG+CGG | - | chr5.3:8891373-8891392 | MS.gene57197:intron | 35.0% | |
| TGCACGTTTAATCCAATTAG+AGG | - | chr5.3:8894838-8894857 | MS.gene57197:intron | 35.0% | |
| TGTTATATGCCTGAAACATG+GGG | + | chr5.3:8893307-8893326 | None:intergenic | 35.0% | |
| TGTTCTGCACTTGCAAAATT+AGG | + | chr5.3:8891637-8891656 | None:intergenic | 35.0% | |
| TTTATCAAGTGTGCTTCTCT+TGG | + | chr5.3:8894176-8894195 | None:intergenic | 35.0% | |
| ! | AATGAAATGCTTTTACTGGG+TGG | - | chr5.3:8895982-8896001 | MS.gene57197:CDS | 35.0% |
| ! | ACACCTTTGATCAAAAGTGT+TGG | + | chr5.3:8891084-8891103 | None:intergenic | 35.0% |
| ! | ATCGATTTCATATTAGAGCG+AGG | - | chr5.3:8895352-8895371 | MS.gene57197:intron | 35.0% |
| ! | GATGTTTTCAATATGGACTC+TGG | - | chr5.3:8895874-8895893 | MS.gene57197:intron | 35.0% |
| ! | GGACAGTAGCTATAATTTTG+AGG | - | chr5.3:8895138-8895157 | MS.gene57197:CDS | 35.0% |
| ! | GTTGGATAGACTAGTCATAT+AGG | + | chr5.3:8894889-8894908 | None:intergenic | 35.0% |
| ! | GTTTTCCAGGAAGATGAATA+TGG | - | chr5.3:8890744-8890763 | MS.gene57197:intron | 35.0% |
| ! | TAATTTTTGTTCCTCGTGGT+CGG | - | chr5.3:8893085-8893104 | MS.gene57197:intron | 35.0% |
| ! | TTTTGTGTGTGCCTATAATG+GGG | + | chr5.3:8893714-8893733 | None:intergenic | 35.0% |
| !! | AACTTTGATTTGTGTTCCGT+AGG | - | chr5.3:8891579-8891598 | MS.gene57197:CDS | 35.0% |
| !! | AATTGTTCGAAGTAACGGAT+CGG | - | chr5.3:8890718-8890737 | MS.gene57197:intron | 35.0% |
| !! | ATATGACTAGTCTATCCAAC+TGG | - | chr5.3:8894889-8894908 | MS.gene57197:intron | 35.0% |
| !! | CACAAATTGTTGGTCTTTAG+TGG | + | chr5.3:8892772-8892791 | None:intergenic | 35.0% |
| !! | CTGGTTTTTACTCAGAATGT+CGG | - | chr5.3:8894908-8894927 | MS.gene57197:intron | 35.0% |
| !! | TTTTACTCAGAATGTCGGTT+TGG | - | chr5.3:8894913-8894932 | MS.gene57197:intron | 35.0% |
| !!! | ATTTTAGTTCTGTTTTGGGG+GGG | + | chr5.3:8892737-8892756 | None:intergenic | 35.0% |
| !!! | CACTTTTTTTACTCGTCTTC+TGG | - | chr5.3:8895279-8895298 | MS.gene57197:intron | 35.0% |
| !!! | CATTTTAGTTCTGTTTTGGG+GGG | + | chr5.3:8892738-8892757 | None:intergenic | 35.0% |
| !!! | GAAAACCTCTTTTTTCAGGA+TGG | - | chr5.3:8893260-8893279 | MS.gene57197:intron | 35.0% |
| !!! | GTTTTTGGTTGAGATGATTG+CGG | - | chr5.3:8890951-8890970 | MS.gene57197:intron | 35.0% |
| !!! | TTCATCTTTTTCAACAGCTC+TGG | - | chr5.3:8892415-8892434 | MS.gene57197:intron | 35.0% |
| !!! | TTGTTTTGGGATACGCTATT+TGG | - | chr5.3:8891317-8891336 | MS.gene57197:intron | 35.0% |
| AAAATCGGTGAAGGATGAGA+CGG | - | chr5.3:8890788-8890807 | MS.gene57197:intron | 40.0% | |
| AAGACGAGAGATAGGAAGAA+AGG | - | chr5.3:8893985-8894004 | MS.gene57197:intron | 40.0% | |
| ACACACAAAAAACACGGGTT+TGG | - | chr5.3:8893724-8893743 | MS.gene57197:intron | 40.0% | |
| ACTGGAGGACATTATGTTGA+CGG | + | chr5.3:8892206-8892225 | None:intergenic | 40.0% | |
| ACTTCTCCCCTTTAATAACG+GGG | + | chr5.3:8896220-8896239 | None:intergenic | 40.0% | |
| ACTTCTTCTCTACTAGTGAG+TGG | - | chr5.3:8892119-8892138 | MS.gene57197:intron | 40.0% | |
| AGGGCGAAAAGGATTGTAAT+TGG | - | chr5.3:8895426-8895445 | MS.gene57197:intron | 40.0% | |
| AGTGTCAAAGTCCCCATTAT+AGG | - | chr5.3:8893700-8893719 | MS.gene57197:intron | 40.0% | |
| AGTTGAGAATGATTTCCCAG+AGG | - | chr5.3:8894721-8894740 | MS.gene57197:intron | 40.0% | |
| ATCAAGATTGATGTTACGCG+AGG | - | chr5.3:8891699-8891718 | MS.gene57197:intron | 40.0% | |
| ATTGCTGGAAAAATCGGTGA+AGG | - | chr5.3:8890779-8890798 | MS.gene57197:intron | 40.0% | |
| ATTGTAATTGGCAAGTCGGT+TGG | - | chr5.3:8895438-8895457 | MS.gene57197:intron | 40.0% | |
| CACTTCTCCCCTTTAATAAC+GGG | + | chr5.3:8896221-8896240 | None:intergenic | 40.0% | |
| CAGTTTCTTCCATTACTCTC+AGG | - | chr5.3:8890611-8890630 | MS.gene57197:intron | 40.0% | |
| CATGTATGTCAGTGTAGCAT+TGG | + | chr5.3:8891129-8891148 | None:intergenic | 40.0% | |
| CCACTTCTCCCCTTTAATAA+CGG | + | chr5.3:8896222-8896241 | None:intergenic | 40.0% | |
| CGAAAACGGTTAAAGCCAAT+TGG | - | chr5.3:8890508-8890527 | MS.gene57197:CDS | 40.0% | |
| CGTTATTAAAGGGGAGAAGT+GGG | - | chr5.3:8896220-8896239 | MS.gene57197:CDS | 40.0% | |
| CGTTCAATCAACGACCTTAA+AGG | + | chr5.3:8894771-8894790 | None:intergenic | 40.0% | |
| GAAATGCTGAGATTCACAAC+TGG | + | chr5.3:8896046-8896065 | None:intergenic | 40.0% | |
| GACCCTAATACTCATACTCA+AGG | + | chr5.3:8893199-8893218 | None:intergenic | 40.0% | |
| GATTATACTTACGAGGAGTG+AGG | - | chr5.3:8892325-8892344 | MS.gene57197:intron | 40.0% | |
| GCGTGACTTTAGGCAAAAAA+AGG | - | chr5.3:8893933-8893952 | MS.gene57197:intron | 40.0% | |
| GGTTGCTACAAAGTGGATAA+GGG | - | chr5.3:8896241-8896260 | MS.gene57197:CDS | 40.0% | |
| GTACAAAGGGAATCAGAACA+AGG | - | chr5.3:8891737-8891756 | MS.gene57197:intron | 40.0% | |
| GTGAAACAGAAAAGCAGTGT+TGG | + | chr5.3:8892709-8892728 | None:intergenic | 40.0% | |
| TAACAGATGTTCCAGAAGGT+GGG | - | chr5.3:8894987-8895006 | MS.gene57197:intron | 40.0% | |
| TACATTAGCAAGCGAGCATT+GGG | + | chr5.3:8892558-8892577 | None:intergenic | 40.0% | |
| TAGGCACACACAAAAAACAC+GGG | - | chr5.3:8893719-8893738 | MS.gene57197:intron | 40.0% | |
| TATGTTTATCAGCGCTTCTG+AGG | - | chr5.3:8892438-8892457 | MS.gene57197:intron | 40.0% | |
| TCAAGATTGATGTTACGCGA+GGG | - | chr5.3:8891700-8891719 | MS.gene57197:intron | 40.0% | |
| TCACTAGTAGAGAAGAAGTC+AGG | + | chr5.3:8892118-8892137 | None:intergenic | 40.0% | |
| TCGCGTAACATCAATCTTGA+TGG | + | chr5.3:8891700-8891719 | None:intergenic | 40.0% | |
| TCGGTAAATAGCACCTATAG+TGG | - | chr5.3:8891252-8891271 | MS.gene57197:intron | 40.0% | |
| TTAACAGATGTTCCAGAAGG+TGG | - | chr5.3:8894986-8895005 | MS.gene57197:intron | 40.0% | |
| TTACATTAGCAAGCGAGCAT+TGG | + | chr5.3:8892559-8892578 | None:intergenic | 40.0% | |
| TTGTAAGTCACTGTGTCAGT+GGG | + | chr5.3:8894062-8894081 | None:intergenic | 40.0% | |
| ! | AACAGAAAAGCAGTGTTGGA+AGG | + | chr5.3:8892705-8892724 | None:intergenic | 40.0% |
| ! | ACCGTAATTTTTGTTCCTCG+TGG | - | chr5.3:8893081-8893100 | MS.gene57197:intron | 40.0% |
| ! | AGAAACAGAGGAAGGTACAA+AGG | - | chr5.3:8891723-8891742 | MS.gene57197:intron | 40.0% |
| ! | CTTGGGAATTTTTGTTGCTC+TGG | + | chr5.3:8892503-8892522 | None:intergenic | 40.0% |
| ! | GAAACAGAGGAAGGTACAAA+GGG | - | chr5.3:8891724-8891743 | MS.gene57197:intron | 40.0% |
| ! | GCACCAACACTTTTGATCAA+AGG | - | chr5.3:8891078-8891097 | MS.gene57197:intron | 40.0% |
| ! | GTTTTCAATATGGACTCTGG+AGG | - | chr5.3:8895877-8895896 | MS.gene57197:intron | 40.0% |
| ! | TAGGAAAGTATAAAGCGCGT+GGG | + | chr5.3:8891618-8891637 | None:intergenic | 40.0% |
| ! | TCTTGCTAACTTGCGCTTTA+AGG | + | chr5.3:8894519-8894538 | None:intergenic | 40.0% |
| ! | TTAGGAAAGTATAAAGCGCG+TGG | + | chr5.3:8891619-8891638 | None:intergenic | 40.0% |
| ! | TTGAAGCTGGGTTGGATTAT+TGG | - | chr5.3:8891938-8891957 | MS.gene57197:intron | 40.0% |
| ! | TTTTGCCTAAAGTCACGCAA+AGG | + | chr5.3:8893931-8893950 | None:intergenic | 40.0% |
| !! | ACACACATAGGTTGATGAGT+CGG | - | chr5.3:8894236-8894255 | MS.gene57197:intron | 40.0% |
| !! | CTTTTGATCAAAGGTGTGTC+TGG | - | chr5.3:8891087-8891106 | MS.gene57197:intron | 40.0% |
| !! | GTCGGTTTTACTCAGAATGT+CGG | - | chr5.3:8894926-8894945 | MS.gene57197:intron | 40.0% |
| !! | TTCTTTCTCGCTGGTTTCTT+CGG | - | chr5.3:8890585-8890604 | MS.gene57197:intron | 40.0% |
| AACACGGGTTTGGAGAAAAG+TGG | - | chr5.3:8893734-8893753 | MS.gene57197:intron | 45.0% | |
| AACAGATGTTCCAGAAGGTG+GGG | - | chr5.3:8894988-8895007 | MS.gene57197:intron | 45.0% | |
| AACATCCTCCGCTATAAGGT+TGG | - | chr5.3:8893323-8893342 | MS.gene57197:intron | 45.0% | |
| AAGTCACGCAAAGGTAGAGA+CGG | + | chr5.3:8893922-8893941 | None:intergenic | 45.0% | |
| AATTCCCAAGACTCATGGAG+AGG | - | chr5.3:8892513-8892532 | MS.gene57197:intron | 45.0% | |
| ACCGGGTCAATTGTACCATT+AGG | + | chr5.3:8895226-8895245 | None:intergenic | 45.0% | |
| ACTCTCCAGCATGCAACAAA+CGG | + | chr5.3:8890818-8890837 | None:intergenic | 45.0% | |
| AGAGAAGGGACTTACATCAC+AGG | - | chr5.3:8895685-8895704 | MS.gene57197:intron | 45.0% | |
| AGGTAAGAGAAAGGGCGAAA+AGG | - | chr5.3:8895415-8895434 | MS.gene57197:intron | 45.0% | |
| AGTAGAGAAGAAGTCAGGAC+TGG | + | chr5.3:8892113-8892132 | None:intergenic | 45.0% | |
| CAAAAATGAAGCCACCTGCA+TGG | + | chr5.3:8894960-8894979 | None:intergenic | 45.0% | |
| CCCTAATGGTACAATTGACC+CGG | - | chr5.3:8895222-8895241 | MS.gene57197:intron | 45.0% | |
| CCGGGTCAATTGTACCATTA+GGG | + | chr5.3:8895225-8895244 | None:intergenic | 45.0% | |
| CCGTTATTAAAGGGGAGAAG+TGG | - | chr5.3:8896219-8896238 | MS.gene57197:CDS | 45.0% | |
| CGAGAGATAGGAAGAAAGGT+AGG | - | chr5.3:8893989-8894008 | MS.gene57197:intron | 45.0% | |
| CTATGATGCATTCAATCCCG+CGG | - | chr5.3:8893364-8893383 | MS.gene57197:intron | 45.0% | |
| CTCTACCTTTGCGTGACTTT+AGG | - | chr5.3:8893923-8893942 | MS.gene57197:intron | 45.0% | |
| CTTCGTTCTCAAGCTCCAAT+TGG | + | chr5.3:8890526-8890545 | None:intergenic | 45.0% | |
| CTTGTAAGTCACTGTGTCAG+TGG | + | chr5.3:8894063-8894082 | None:intergenic | 45.0% | |
| GATCCGTCTAAGCCTCTAAT+TGG | + | chr5.3:8894853-8894872 | None:intergenic | 45.0% | |
| GGAAGACTTCATGCAGTTCT+TGG | - | chr5.3:8892140-8892159 | MS.gene57197:intron | 45.0% | |
| GGACGTAAAAGACGAGAGAT+AGG | - | chr5.3:8893977-8893996 | MS.gene57197:intron | 45.0% | |
| GGGTTGCTACAAAGTGGATA+AGG | - | chr5.3:8896240-8896259 | MS.gene57197:CDS | 45.0% | |
| GTAGAGAAGAAGTCAGGACT+GGG | + | chr5.3:8892112-8892131 | None:intergenic | 45.0% | |
| GTTACCTCTCCATGAGTCTT+GGG | + | chr5.3:8892520-8892539 | None:intergenic | 45.0% | |
| TCACGCCATATTCATCTTCC+TGG | + | chr5.3:8890752-8890771 | None:intergenic | 45.0% | |
| TCGACGAGTCATGACATGTT+CGG | - | chr5.3:8891192-8891211 | MS.gene57197:intron | 45.0% | |
| TGCATCTTCTTCTTTCTCGC+TGG | - | chr5.3:8890576-8890595 | MS.gene57197:intron | 45.0% | |
| TGTGTAGAATGGGTCGAACA+TGG | - | chr5.3:8895117-8895136 | MS.gene57197:CDS | 45.0% | |
| TGTTACCTCTCCATGAGTCT+TGG | + | chr5.3:8892521-8892540 | None:intergenic | 45.0% | |
| TTATTCTTACTCCGACCACG+AGG | + | chr5.3:8893099-8893118 | None:intergenic | 45.0% | |
| TTTGGCAGACATCACTCCAT+GGG | - | chr5.3:8896189-8896208 | MS.gene57197:CDS | 45.0% | |
| TTTGTCCAACCTTATAGCGG+AGG | + | chr5.3:8893331-8893350 | None:intergenic | 45.0% | |
| ! | ACATTAGCAAGCGAGCATTG+GGG | + | chr5.3:8892557-8892576 | None:intergenic | 45.0% |
| ! | GGAGACCATGTTTCCTTTTG+AGG | - | chr5.3:8895009-8895028 | MS.gene57197:intron | 45.0% |
| !! | AGAAGTGGGTTGCTACAAAG+TGG | - | chr5.3:8896234-8896253 | MS.gene57197:CDS | 45.0% |
| !! | CATCACGCAAAAGCATTGAC+AGG | + | chr5.3:8892861-8892880 | None:intergenic | 45.0% |
| !! | TTACCCTTTGGCTCTCTTGT+GGG | + | chr5.3:8893397-8893416 | None:intergenic | 45.0% |
| !! | AAAGTTAATATAATAATATT+TGG | - | chr5.3:8894433-8894452 | MS.gene57197:intron | 5.0% |
| !! | GAATAAAAAATAATATATTT+CGG | + | chr5.3:8892260-8892279 | None:intergenic | 5.0% |
| ACAAGTCATGTGCCGTGATC+GGG | + | chr5.3:8894271-8894290 | None:intergenic | 50.0% | |
| ATCAAGCCTCAGAAGGGAGA+CGG | - | chr5.3:8895178-8895197 | MS.gene57197:intron | 50.0% | |
| CACAAGTCATGTGCCGTGAT+CGG | + | chr5.3:8894272-8894291 | None:intergenic | 50.0% | |
| CAGGATTACTGCAGCATCGT+TGG | + | chr5.3:8892842-8892861 | None:intergenic | 50.0% | |
| CGCAAAGGTAGAGACGGAAA+AGG | + | chr5.3:8893916-8893935 | None:intergenic | 50.0% | |
| CGGAGTTCAAATCCCGATCA+CGG | - | chr5.3:8894256-8894275 | MS.gene57197:CDS | 50.0% | |
| CTGAGATTCACAACTGGTGC+AGG | + | chr5.3:8896040-8896059 | None:intergenic | 50.0% | |
| CTGAGGAATCCCCATGTTTC+AGG | - | chr5.3:8893295-8893314 | MS.gene57197:intron | 50.0% | |
| CTTTGGCAGACATCACTCCA+TGG | - | chr5.3:8896188-8896207 | MS.gene57197:CDS | 50.0% | |
| GAGCTGCCCCGTTATTAAAG+GGG | - | chr5.3:8896211-8896230 | MS.gene57197:CDS | 50.0% | |
| GCATTCAATCCCGCGGAATA+TGG | - | chr5.3:8893371-8893390 | MS.gene57197:intron | 50.0% | |
| GGAGCTGCCCCGTTATTAAA+GGG | - | chr5.3:8896210-8896229 | MS.gene57197:CDS | 50.0% | |
| GGGTTCCAGCTCAAAACCTA+CGG | + | chr5.3:8891598-8891617 | None:intergenic | 50.0% | |
| TTACTGGGTGGTTGAGAGGA+AGG | - | chr5.3:8895994-8896013 | MS.gene57197:CDS | 50.0% | |
| TTGTTGCATGCTGGAGAGTC+CGG | - | chr5.3:8890819-8890838 | MS.gene57197:intron | 50.0% | |
| ! | AACGGATCGGTGAGTTTTCC+AGG | - | chr5.3:8890731-8890750 | MS.gene57197:intron | 50.0% |
| ! | AGCGCTTCTGAGGACAAAAC+GGG | - | chr5.3:8892448-8892467 | MS.gene57197:intron | 50.0% |
| ! | CAGCGCTTCTGAGGACAAAA+CGG | - | chr5.3:8892447-8892466 | MS.gene57197:intron | 50.0% |
| ! | GCTTTTACTGGGTGGTTGAG+AGG | - | chr5.3:8895990-8896009 | MS.gene57197:CDS | 50.0% |
| !! | AACCAAAGGAGCGCCACTAT+AGG | + | chr5.3:8891268-8891287 | None:intergenic | 50.0% |
| !! | ATTAGCAAGCGAGCATTGGG+GGG | + | chr5.3:8892555-8892574 | None:intergenic | 50.0% |
| !! | CATTAGCAAGCGAGCATTGG+GGG | + | chr5.3:8892556-8892575 | None:intergenic | 50.0% |
| !! | CTTACCCTTTGGCTCTCTTG+TGG | + | chr5.3:8893398-8893417 | None:intergenic | 50.0% |
| !! | TGTCGGTTTGGTTACCATGC+AGG | - | chr5.3:8894943-8894962 | MS.gene57197:intron | 50.0% |
| !!! | GTGTTCCGTAGGTTTTGAGC+TGG | - | chr5.3:8891590-8891609 | MS.gene57197:CDS | 50.0% |
| !!! | GTTCTGTTTTGGGGGGGAAA+TGG | + | chr5.3:8892731-8892750 | None:intergenic | 50.0% |
| AACATGGTCTCCCCACCTTC+TGG | + | chr5.3:8895001-8895020 | None:intergenic | 55.0% | |
| AGAAGTCCGTCTCCCTTCTG+AGG | + | chr5.3:8895187-8895206 | None:intergenic | 55.0% | |
| ATGGCCCACAAGAGAGCCAA+AGG | - | chr5.3:8893390-8893409 | MS.gene57197:CDS | 55.0% | |
| CACCTATAGTGGCGCTCCTT+TGG | - | chr5.3:8891263-8891282 | MS.gene57197:intron | 55.0% | |
| CTCTTGTGGGCCATATTCCG+CGG | + | chr5.3:8893384-8893403 | None:intergenic | 55.0% | |
| GGGAGCTGCCCCGTTATTAA+AGG | - | chr5.3:8896209-8896228 | MS.gene57197:CDS | 55.0% | |
| GTTACGCGAGGGAGAAACAG+AGG | - | chr5.3:8891711-8891730 | MS.gene57197:intron | 55.0% | |
| TCTTGTGGGCCATATTCCGC+GGG | + | chr5.3:8893383-8893402 | None:intergenic | 55.0% | |
| TGGCCCACAAGAGAGCCAAA+GGG | - | chr5.3:8893391-8893410 | MS.gene57197:CDS | 55.0% | |
| TGGCGTGAGAGTGAGATTGC+TGG | - | chr5.3:8890764-8890783 | MS.gene57197:intron | 55.0% | |
| TGTCAGTGGGTAGACGACGA+GGG | + | chr5.3:8894049-8894068 | None:intergenic | 55.0% | |
| ! | GAGCACCGTTTGTTGCATGC+TGG | - | chr5.3:8890810-8890829 | MS.gene57197:intron | 55.0% |
| ! | TAATAACGGGGCAGCTCCCA+TGG | + | chr5.3:8896208-8896227 | None:intergenic | 55.0% |
| !! | CGGTTTGGTTACCATGCAGG+TGG | - | chr5.3:8894946-8894965 | MS.gene57197:intron | 55.0% |
| CGCGAGGGAGAAACAGAGGA+AGG | - | chr5.3:8891715-8891734 | MS.gene57197:intron | 60.0% | |
| GTCAGTGGGTAGACGACGAG+GGG | + | chr5.3:8894048-8894067 | None:intergenic | 60.0% | |
| GTGTCAGTGGGTAGACGACG+AGG | + | chr5.3:8894050-8894069 | None:intergenic | 60.0% | |
| TGGGTAGACGACGAGGGGTA+AGG | + | chr5.3:8894043-8894062 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8890501 | 8896286 | 8890501 | ID=MS.gene57197 |
| chr5.3 | mRNA | 8890501 | 8896286 | 8890501 | ID=MS.gene57197.t1;Parent=MS.gene57197 |
| chr5.3 | exon | 8896155 | 8896286 | 8896155 | ID=MS.gene57197.t1.exon1;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8896155 | 8896286 | 8896155 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8895915 | 8896034 | 8895915 | ID=MS.gene57197.t1.exon2;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8895915 | 8896034 | 8895915 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8895029 | 8895186 | 8895029 | ID=MS.gene57197.t1.exon3;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8895029 | 8895186 | 8895029 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8894253 | 8894355 | 8894253 | ID=MS.gene57197.t1.exon4;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8894253 | 8894355 | 8894253 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8893375 | 8893470 | 8893375 | ID=MS.gene57197.t1.exon5;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8893375 | 8893470 | 8893375 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8891757 | 8891822 | 8891757 | ID=MS.gene57197.t1.exon6;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8891757 | 8891822 | 8891757 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8891544 | 8891663 | 8891544 | ID=MS.gene57197.t1.exon7;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8891544 | 8891663 | 8891544 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| chr5.3 | exon | 8890501 | 8890590 | 8890501 | ID=MS.gene57197.t1.exon8;Parent=MS.gene57197.t1 |
| chr5.3 | CDS | 8890501 | 8890590 | 8890501 | ID=cds.MS.gene57197.t1;Parent=MS.gene57197.t1 |
| Gene Sequence |
| Protein sequence |
