Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57346.t1 | XP_013446740.1 | 95.9 | 414 | 17 | 0 | 1 | 414 | 79 | 492 | 4.10E-230 | 807 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57346.t1 | B5BSX1 | 80.7 | 415 | 79 | 1 | 1 | 414 | 79 | 493 | 1.9e-199 | 696.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57346.t1 | A0A072TTK5 | 95.9 | 414 | 17 | 0 | 1 | 414 | 79 | 492 | 3.0e-230 | 807.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057469 | MS.gene57346 | 0.807271 | 5.48E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAACTCTAGGATGGATTT+TGG | 0.183406 | 4.2:+11709133 | None:intergenic |
| GATGATGTAAACTTTAAAAT+TGG | 0.221158 | 4.2:-11709160 | MS.gene57346:CDS |
| AACATGGATAATGGATTTAA+AGG | 0.226332 | 4.2:+11708916 | None:intergenic |
| AAGGATGGAAAGTGCTAATA+TGG | 0.240790 | 4.2:-11704627 | MS.gene57346:CDS |
| GGATTAAATTCTTTAGGATT+TGG | 0.255187 | 4.2:+11704571 | None:intergenic |
| GCAGGAACCTTCCTTCCTTT+TGG | 0.257256 | 4.2:-11704362 | MS.gene57346:CDS |
| CATGCTAGACAATTCTTCTA+AGG | 0.275130 | 4.2:+11708979 | None:intergenic |
| CTAGAAGGATTAAATTCTTT+AGG | 0.275722 | 4.2:+11704565 | None:intergenic |
| CAATGTCCTCGAGACGTTCT+AGG | 0.290359 | 4.2:+11709011 | None:intergenic |
| AGATGAGAATGGTAGAAAAT+TGG | 0.293989 | 4.2:-11707494 | MS.gene57346:CDS |
| GATTAAATTCTTTAGGATTT+GGG | 0.319276 | 4.2:+11704572 | None:intergenic |
| ATTAGCACTTTCCATCCTTT+TGG | 0.324132 | 4.2:+11704631 | None:intergenic |
| CAACTTACTTTCCATCTAGA+AGG | 0.327376 | 4.2:+11704550 | None:intergenic |
| TCCCATGAAAACATGGATAA+TGG | 0.327967 | 4.2:+11708907 | None:intergenic |
| AAGGTAGTAACACGGCAATC+TGG | 0.365312 | 4.2:+11703149 | None:intergenic |
| GGGTGAGAAGAAAGATCTTA+TGG | 0.374691 | 4.2:-11707536 | MS.gene57346:CDS |
| AAGAATTTAATCCTTCTAGA+TGG | 0.377017 | 4.2:-11704561 | MS.gene57346:CDS |
| ATCTCTTTCAAGAGCTCGAT+GGG | 0.385260 | 4.2:+11708950 | None:intergenic |
| CTGCCTTGCTAAGGTTATAA+AGG | 0.387885 | 4.2:-11703102 | MS.gene57346:CDS |
| GATATCAGTGACTTGTTGAT+AGG | 0.400430 | 4.2:-11707463 | MS.gene57346:CDS |
| GGATCACAAATTATGATACT+TGG | 0.401745 | 4.2:+11709208 | None:intergenic |
| TCATTTACTGATTTGTCTAA+AGG | 0.410035 | 4.2:-11708848 | MS.gene57346:CDS |
| CTAATCACTGCTCCCATTGT+TGG | 0.416717 | 4.2:-11709055 | MS.gene57346:CDS |
| GGACATGAAAGTACAGCAAC+TGG | 0.417886 | 4.2:-11707427 | MS.gene57346:CDS |
| AGCAAAACCAGGTGCATTGA+TGG | 0.422998 | 4.2:+11708811 | None:intergenic |
| ATCTACAAAACTCACGTGTA+TGG | 0.423032 | 4.2:-11709235 | MS.gene57346:CDS |
| GAAGAACCTTGAGTGCTTTG+TGG | 0.425224 | 4.2:+11708786 | None:intergenic |
| AGCACTCGCTTACACATATC+AGG | 0.430756 | 4.2:+11709187 | None:intergenic |
| ATCATTTCCTCCTTAACTAC+AGG | 0.435598 | 4.2:-11704277 | MS.gene57346:intron |
| AGATCTTATGGATATTCTAC+TGG | 0.441404 | 4.2:-11707524 | MS.gene57346:CDS |
| TGCGTTCGAGACATCAATCA+TGG | 0.445585 | 4.2:+11709099 | None:intergenic |
| CAACAATGGGAGCAGTGATT+AGG | 0.452775 | 4.2:+11709056 | None:intergenic |
| AACCTCCTTTCATCCACAAC+AGG | 0.455595 | 4.2:+11707583 | None:intergenic |
| TAAGGTTATCTCATACCAAA+AGG | 0.468063 | 4.2:-11704646 | MS.gene57346:intron |
| AGTTGCTGTACTTTCATGTC+CGG | 0.469663 | 4.2:+11707429 | None:intergenic |
| AGGAAGGAAGGTTCCTGCCT+TGG | 0.475304 | 4.2:+11704367 | None:intergenic |
| AGGTAGTAACACGGCAATCT+GGG | 0.484239 | 4.2:+11703150 | None:intergenic |
| CATCTCTTTCAAGAGCTCGA+TGG | 0.491961 | 4.2:+11708949 | None:intergenic |
| GCAAAACCAGGTGCATTGAT+GGG | 0.493566 | 4.2:+11708812 | None:intergenic |
| TGCTCCCATTGTTGGTCACA+AGG | 0.500198 | 4.2:-11709047 | MS.gene57346:CDS |
| ATGGGCGAGAGCCATTCATA+TGG | 0.501050 | 4.2:-11704608 | MS.gene57346:CDS |
| AGCCTACTTCCTACTCCAAA+AGG | 0.501319 | 4.2:+11704347 | None:intergenic |
| TGCTTTCCACAAAGCACTCA+AGG | 0.502412 | 4.2:-11708792 | MS.gene57346:intron |
| AACACCTTGTGACCAACAAT+GGG | 0.510261 | 4.2:+11709043 | None:intergenic |
| TGAGAATGGTAGAAAATTGG+AGG | 0.517565 | 4.2:-11707491 | MS.gene57346:CDS |
| CTGGAAATCAAAGATGAGAA+TGG | 0.530597 | 4.2:-11707505 | MS.gene57346:CDS |
| ATATTCAGAATCCATATGAA+TGG | 0.530608 | 4.2:+11704597 | None:intergenic |
| TAAATTATTGCAACCTGTTG+TGG | 0.533522 | 4.2:-11707596 | MS.gene57346:CDS |
| CACTGATAACTGCCTTGCTA+AGG | 0.533525 | 4.2:-11703111 | MS.gene57346:CDS |
| ATGGTGCTGACCTGTAGTTA+AGG | 0.540441 | 4.2:+11704267 | None:intergenic |
| TAACACCTTGTGACCAACAA+TGG | 0.541607 | 4.2:+11709042 | None:intergenic |
| GTTATCTCATACCAAAAGGA+TGG | 0.541796 | 4.2:-11704642 | MS.gene57346:CDS |
| TCCTACTCCAAAAGGAAGGA+AGG | 0.554596 | 4.2:+11704355 | None:intergenic |
| CAGGATTATAATGCCAAGGC+AGG | 0.555264 | 4.2:-11704380 | MS.gene57346:CDS |
| AGGATGGAAAGTGCTAATAT+GGG | 0.557435 | 4.2:-11704626 | MS.gene57346:CDS |
| TGCAACCTGTTGTGGATGAA+AGG | 0.568662 | 4.2:-11707588 | MS.gene57346:CDS |
| ACATCTGATGTCAGCATCAA+CGG | 0.578007 | 4.2:-11704765 | MS.gene57346:intron |
| TAGAAGTTCCCATGAAAACA+TGG | 0.582939 | 4.2:+11708900 | None:intergenic |
| GTAGGAAGTAGGCTCTGCCC+CGG | 0.588748 | 4.2:-11704338 | MS.gene57346:CDS |
| AGAAATCTTGAAGACAAGAC+CGG | 0.589095 | 4.2:-11704993 | MS.gene57346:CDS |
| GCGTTCGAGACATCAATCAT+GGG | 0.592417 | 4.2:+11709100 | None:intergenic |
| TGTGCAGGATTATAATGCCA+AGG | 0.598833 | 4.2:-11704384 | MS.gene57346:intron |
| CTTAGCAAGGCAGTTATCAG+TGG | 0.599482 | 4.2:+11703112 | None:intergenic |
| TTAGCAAGGCAGTTATCAGT+GGG | 0.602254 | 4.2:+11703113 | None:intergenic |
| CAAAACCAGGTGCATTGATG+GGG | 0.608062 | 4.2:+11708813 | None:intergenic |
| TCTATCCCCATCAATGCACC+TGG | 0.609170 | 4.2:-11708818 | MS.gene57346:CDS |
| TACTTCCTACTCCAAAAGGA+AGG | 0.614768 | 4.2:+11704351 | None:intergenic |
| GTACAGCAACTGGGATAATG+TGG | 0.620572 | 4.2:-11707417 | MS.gene57346:CDS |
| GACATGAAAGTACAGCAACT+GGG | 0.625895 | 4.2:-11707426 | MS.gene57346:CDS |
| GTGCTGACCTGTAGTTAAGG+AGG | 0.630295 | 4.2:+11704270 | None:intergenic |
| TTATCAGTGGGCTTACATTG+TGG | 0.632127 | 4.2:+11703125 | None:intergenic |
| GCTTTGTGGAAAGCAAAACC+AGG | 0.639236 | 4.2:+11708800 | None:intergenic |
| AGACCTTTATAACCTTAGCA+AGG | 0.643148 | 4.2:+11703099 | None:intergenic |
| AGTGGGCTTACATTGTGGCA+AGG | 0.658713 | 4.2:+11703130 | None:intergenic |
| TCTCTTTCAAGAGCTCGATG+GGG | 0.688264 | 4.2:+11708951 | None:intergenic |
| AACCTGTTGTGGATGAAAGG+AGG | 0.708298 | 4.2:-11707585 | MS.gene57346:CDS |
| CATGTACCTAGAACGTCTCG+AGG | 0.720742 | 4.2:-11709017 | MS.gene57346:CDS |
| ATTGTGGCAAGGTAGTAACA+CGG | 0.760986 | 4.2:+11703141 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAGTTATAATAATAT+TGG | - | chr4.2:11708335-11708354 | MS.gene57346:intron | 10.0% |
| !! | TAAGATAAAATTTCTATTAA+TGG | - | chr4.2:11705140-11705159 | MS.gene57346:intron | 10.0% |
| !! | TGTAAAATAACTAATTATTA+AGG | + | chr4.2:11707035-11707054 | None:intergenic | 10.0% |
| !!! | ATAAATATTGATAATAACTT+AGG | - | chr4.2:11708212-11708231 | MS.gene57346:intron | 10.0% |
| !!! | ATTATATTTGATTTAAACTT+TGG | - | chr4.2:11704664-11704683 | MS.gene57346:intron | 10.0% |
| !! | AAATAAAGTTAGCAATATTT+GGG | - | chr4.2:11704995-11705014 | MS.gene57346:CDS | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4.2:11708890-11708909 | MS.gene57346:CDS | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4.2:11708891-11708910 | None:intergenic | 15.0% |
| !! | ATAGTTAATATGAAAATTGT+TGG | + | chr4.2:11706989-11707008 | None:intergenic | 15.0% |
| !! | CTGACAAAATAAATAATAAT+GGG | + | chr4.2:11705572-11705591 | None:intergenic | 15.0% |
| !! | TAAATAAAGTTAGCAATATT+TGG | - | chr4.2:11704994-11705013 | MS.gene57346:CDS | 15.0% |
| !! | TAGTTATCAACATTTATTAA+CGG | - | chr4.2:11707646-11707665 | MS.gene57346:intron | 15.0% |
| !! | TGACAAAATAAATAATAATG+GGG | + | chr4.2:11705571-11705590 | None:intergenic | 15.0% |
| !!! | AAAAAGTTTAAAATTAGTGT+TGG | - | chr4.2:11708578-11708597 | MS.gene57346:intron | 15.0% |
| !!! | AAAAGTTTAAAATTAGTGTT+GGG | - | chr4.2:11708579-11708598 | MS.gene57346:intron | 15.0% |
| !!! | AGTGTAAAATAACTTTTTTT+TGG | + | chr4.2:11707140-11707159 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTACTTGTATTAT+TGG | - | chr4.2:11706403-11706422 | MS.gene57346:intron | 15.0% |
| !!! | TGACAATTTTTAGAAAATTA+AGG | - | chr4.2:11708452-11708471 | MS.gene57346:intron | 15.0% |
| !!! | TTACATTTTTCATATATTGA+AGG | - | chr4.2:11707313-11707332 | MS.gene57346:intron | 15.0% |
| !!! | TTTGACTTAGATTATTATTT+GGG | - | chr4.2:11705274-11705293 | MS.gene57346:intron | 15.0% |
| !!! | TTTTGACTTAGATTATTATT+TGG | - | chr4.2:11705273-11705292 | MS.gene57346:intron | 15.0% |
| !! | AAAAAAATTCAGAACCAAAA+AGG | + | chr4.2:11704559-11704578 | None:intergenic | 20.0% |
| !! | AAAAATCATCTAATATGAGA+CGG | - | chr4.2:11705974-11705993 | MS.gene57346:intron | 20.0% |
| !! | AAAACGAGAAAATGAAAAAA+TGG | - | chr4.2:11707171-11707190 | MS.gene57346:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4.2:11708900-11708919 | None:intergenic | 20.0% |
| !! | AAATGAAAAAATGGTCAATA+AGG | - | chr4.2:11707180-11707199 | MS.gene57346:intron | 20.0% |
| !! | AATGAAAAAATGGTCAATAA+GGG | - | chr4.2:11707181-11707200 | MS.gene57346:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr4.2:11708857-11708876 | MS.gene57346:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4.2:11708944-11708963 | MS.gene57346:CDS | 20.0% |
| !! | AGTTATCAACATTTATTAAC+GGG | - | chr4.2:11707647-11707666 | MS.gene57346:intron | 20.0% |
| !! | ATATTCGTTATAATTAGAAG+AGG | - | chr4.2:11704056-11704075 | MS.gene57346:intron | 20.0% |
| !! | ATTAAGTTAAACTTTGGTAA+CGG | + | chr4.2:11706103-11706122 | None:intergenic | 20.0% |
| !! | CAGAACATTATTAAAAACAT+TGG | - | chr4.2:11703464-11703483 | MS.gene57346:intron | 20.0% |
| !! | CAGTTAATTAAGTTAAACTT+TGG | + | chr4.2:11706109-11706128 | None:intergenic | 20.0% |
| !! | GCTGACAAAATAAATAATAA+TGG | + | chr4.2:11705573-11705592 | None:intergenic | 20.0% |
| !! | TATTCGTTATAATTAGAAGA+GGG | - | chr4.2:11704057-11704076 | MS.gene57346:intron | 20.0% |
| !! | TATTTGGGCTAATATTTAAT+AGG | - | chr4.2:11705010-11705029 | MS.gene57346:intron | 20.0% |
| !! | TTCTAATTATAACGAATATG+AGG | + | chr4.2:11704055-11704074 | None:intergenic | 20.0% |
| !!! | AAATAACTTTTTTTTGGTAG+TGG | + | chr4.2:11707134-11707153 | None:intergenic | 20.0% |
| !!! | AGATAACTTTTTTTTTCTTC+CGG | - | chr4.2:11706572-11706591 | MS.gene57346:intron | 20.0% |
| !!! | AGTTAGCAAGAATAATTTTT+AGG | + | chr4.2:11706762-11706781 | None:intergenic | 20.0% |
| !!! | ATCATTTGCTCAATATTTTA+AGG | - | chr4.2:11707675-11707694 | MS.gene57346:intron | 20.0% |
| !!! | ATGTTCATTTTATCTTGAAA+TGG | - | chr4.2:11704606-11704625 | MS.gene57346:CDS | 20.0% |
| !!! | CTATTGGTTAGTTTTAAAAT+TGG | - | chr4.2:11708906-11708925 | MS.gene57346:CDS | 20.0% |
| !!! | GATGATGTAAACTTTAAAAT+TGG | - | chr4.2:11703179-11703198 | MS.gene57346:intron | 20.0% |
| !!! | GATTAAATTCTTTAGGATTT+GGG | + | chr4.2:11707770-11707789 | None:intergenic | 20.0% |
| !!! | GTTTAACTTAATTAACTGAT+AGG | - | chr4.2:11706111-11706130 | MS.gene57346:intron | 20.0% |
| !!! | TATTCACTTGTTATTCTTTT+AGG | - | chr4.2:11709087-11709106 | MS.gene57346:CDS | 20.0% |
| !!! | TCATATTTTCTTTTCCTTTT+TGG | - | chr4.2:11704542-11704561 | MS.gene57346:intron | 20.0% |
| !!! | TCTGAATTTTTTTTTTTGAG+AGG | - | chr4.2:11704566-11704585 | MS.gene57346:CDS | 20.0% |
| !!! | TGTTCATTTTATCTTGAAAT+GGG | - | chr4.2:11704607-11704626 | MS.gene57346:CDS | 20.0% |
| !!! | TTTTTTTTTTTGAGAGGTTT+TGG | - | chr4.2:11704572-11704591 | MS.gene57346:CDS | 20.0% |
| ! | AAAAATAGTTACTCATAAGC+TGG | + | chr4.2:11707626-11707645 | None:intergenic | 25.0% |
| ! | AAAAATTGAAAAGGCAATGT+TGG | + | chr4.2:11707545-11707564 | None:intergenic | 25.0% |
| ! | AACTTACAAATCAAATATGC+TGG | + | chr4.2:11704156-11704175 | None:intergenic | 25.0% |
| ! | AAGAATTTAATCCTTCTAGA+TGG | - | chr4.2:11707778-11707797 | MS.gene57346:intron | 25.0% |
| ! | AGAAAGTAAATAACTCGTAA+GGG | + | chr4.2:11706374-11706393 | None:intergenic | 25.0% |
| ! | AGTACGTCAATAAAATCATA+AGG | - | chr4.2:11708483-11708502 | MS.gene57346:intron | 25.0% |
| ! | ATAAAAAATGGACAACATGT+GGG | - | chr4.2:11704783-11704802 | MS.gene57346:CDS | 25.0% |
| ! | ATATTCAGAATCCATATGAA+TGG | + | chr4.2:11707745-11707764 | None:intergenic | 25.0% |
| ! | ATTATAAAGAGTAGACAAGT+CGG | - | chr4.2:11704009-11704028 | MS.gene57346:intron | 25.0% |
| ! | CTAGAAGGATTAAATTCTTT+AGG | + | chr4.2:11707777-11707796 | None:intergenic | 25.0% |
| ! | GATTGATCTTTGTAAGAAAT+GGG | - | chr4.2:11705206-11705225 | MS.gene57346:intron | 25.0% |
| ! | GTATAGTTCATTTACATATG+TGG | - | chr4.2:11707448-11707467 | MS.gene57346:CDS | 25.0% |
| ! | TCTTTCTCATGTAAGTATAT+TGG | - | chr4.2:11707415-11707434 | MS.gene57346:CDS | 25.0% |
| ! | TGATAGCTTTCGATATTTAT+TGG | - | chr4.2:11709060-11709079 | MS.gene57346:CDS | 25.0% |
| ! | TGATTGATCTTTGTAAGAAA+TGG | - | chr4.2:11705205-11705224 | MS.gene57346:intron | 25.0% |
| !! | ATTGCTAACTTTATTTACCT+TGG | + | chr4.2:11704991-11705010 | None:intergenic | 25.0% |
| !! | TTTTAATGAAGTCAAGCAAA+TGG | - | chr4.2:11707388-11707407 | MS.gene57346:CDS | 25.0% |
| !!! | AAAACGACATCATTTTGAAA+CGG | + | chr4.2:11708809-11708828 | None:intergenic | 25.0% |
| !!! | AACATGGATAATGGATTTAA+AGG | + | chr4.2:11703426-11703445 | None:intergenic | 25.0% |
| !!! | AATTTCAAGTTTTGCTAAGT+CGG | + | chr4.2:11708029-11708048 | None:intergenic | 25.0% |
| !!! | GGATTAAATTCTTTAGGATT+TGG | + | chr4.2:11707771-11707790 | None:intergenic | 25.0% |
| !!! | TCATTTACTGATTTGTCTAA+AGG | - | chr4.2:11703491-11703510 | MS.gene57346:intron | 25.0% |
| !!! | TGGTTAGTTTTAAAATTGGA+TGG | - | chr4.2:11708910-11708929 | MS.gene57346:CDS | 25.0% |
| !!! | TTTCAAAATGATGTCGTTTT+AGG | - | chr4.2:11708809-11708828 | MS.gene57346:CDS | 25.0% |
| AAATCAAACCCAAAACAATG+TGG | + | chr4.2:11704414-11704433 | None:intergenic | 30.0% | |
| AATTGTCATATTCTTGTACC+AGG | + | chr4.2:11708440-11708459 | None:intergenic | 30.0% | |
| ACACGTGTATATAATACTAG+AGG | - | chr4.2:11707232-11707251 | MS.gene57346:intron | 30.0% | |
| ACATCGGATATATAGTCTTT+CGG | - | chr4.2:11703747-11703766 | MS.gene57346:intron | 30.0% | |
| ACGTAAGTTTGCATTAAAAG+TGG | - | chr4.2:11705079-11705098 | MS.gene57346:intron | 30.0% | |
| ACTAACAAAGTCTACATTCA+AGG | - | chr4.2:11705469-11705488 | MS.gene57346:intron | 30.0% | |
| AGAAAACACATTCCTGTATT+GGG | + | chr4.2:11703816-11703835 | None:intergenic | 30.0% | |
| AGATACTTATCTCAATATGC+TGG | + | chr4.2:11704322-11704341 | None:intergenic | 30.0% | |
| AGATCTTATGGATATTCTAC+TGG | - | chr4.2:11704815-11704834 | MS.gene57346:CDS | 30.0% | |
| AGATGAGAATGGTAGAAAAT+TGG | - | chr4.2:11704845-11704864 | MS.gene57346:intron | 30.0% | |
| ATAATCATATCTATCCGATG+TGG | + | chr4.2:11703976-11703995 | None:intergenic | 30.0% | |
| ATGTGACATTGACACATATA+GGG | - | chr4.2:11708282-11708301 | MS.gene57346:intron | 30.0% | |
| ATTATCTATCGTCAATGACA+TGG | + | chr4.2:11703618-11703637 | None:intergenic | 30.0% | |
| CAAAAATGCTATCATTACCA+AGG | + | chr4.2:11706608-11706627 | None:intergenic | 30.0% | |
| CCAAATGATCATACTCAAAT+AGG | - | chr4.2:11706442-11706461 | MS.gene57346:intron | 30.0% | |
| CCTATTTGAGTATGATCATT+TGG | + | chr4.2:11706445-11706464 | None:intergenic | 30.0% | |
| GAAAGTAAATAACTCGTAAG+GGG | + | chr4.2:11706373-11706392 | None:intergenic | 30.0% | |
| GACAATGCATATAATATGCA+AGG | - | chr4.2:11707089-11707108 | MS.gene57346:intron | 30.0% | |
| GAGAAAGTAAATAACTCGTA+AGG | + | chr4.2:11706375-11706394 | None:intergenic | 30.0% | |
| GAGAATATATTTCTTCTTGC+AGG | - | chr4.2:11707495-11707514 | MS.gene57346:CDS | 30.0% | |
| GATAAAAAATGGACAACATG+TGG | - | chr4.2:11704782-11704801 | MS.gene57346:CDS | 30.0% | |
| GGATCACAAATTATGATACT+TGG | + | chr4.2:11703134-11703153 | None:intergenic | 30.0% | |
| TAAATTATTGCAACCTGTTG+TGG | - | chr4.2:11704743-11704762 | MS.gene57346:intron | 30.0% | |
| TAAGGTTATCTCATACCAAA+AGG | - | chr4.2:11707693-11707712 | MS.gene57346:intron | 30.0% | |
| TAATCATATCTATCCGATGT+GGG | + | chr4.2:11703975-11703994 | None:intergenic | 30.0% | |
| TACTAACTTATGCATTGCAT+AGG | - | chr4.2:11709152-11709171 | MS.gene57346:CDS | 30.0% | |
| TATGTGACATTGACACATAT+AGG | - | chr4.2:11708281-11708300 | MS.gene57346:intron | 30.0% | |
| TATTGAGATAAGTATCTGAC+TGG | - | chr4.2:11704325-11704344 | MS.gene57346:CDS | 30.0% | |
| TCATGTTTGCATGATATTGT+AGG | - | chr4.2:11704704-11704723 | MS.gene57346:intron | 30.0% | |
| TGCATATAATATGCAAGGTT+CGG | - | chr4.2:11707094-11707113 | MS.gene57346:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr4.2:11705498-11705517 | MS.gene57346:intron | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr4.2:11705348-11705367 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr4.2:11705497-11705516 | MS.gene57346:intron | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr4.2:11705349-11705368 | None:intergenic | 30.0% | |
| ! | AAAGTCACAATTTTCACTCA+CGG | - | chr4.2:11708668-11708687 | MS.gene57346:intron | 30.0% |
| ! | AACAATGACATTTTATGTGC+AGG | - | chr4.2:11707940-11707959 | MS.gene57346:intron | 30.0% |
| ! | AGATCAAATTGTGTGTTTTG+TGG | - | chr4.2:11703908-11703927 | MS.gene57346:intron | 30.0% |
| ! | ATCCATTATCCATGTTTTCA+TGG | - | chr4.2:11703430-11703449 | MS.gene57346:intron | 30.0% |
| ! | ATTTTCTCCTTAGATTGTGA+TGG | - | chr4.2:11704430-11704449 | MS.gene57346:intron | 30.0% |
| ! | TCAATCATCAATTTTGTGAC+CGG | + | chr4.2:11705192-11705211 | None:intergenic | 30.0% |
| ! | TCCATTATCCATGTTTTCAT+GGG | - | chr4.2:11703431-11703450 | MS.gene57346:intron | 30.0% |
| !! | AGGAGGTTGATGATAAAAAA+TGG | - | chr4.2:11704771-11704790 | MS.gene57346:CDS | 30.0% |
| !! | ATAATATTGGCTTCCTTGTT+AGG | - | chr4.2:11708348-11708367 | MS.gene57346:intron | 30.0% |
| !! | TAATATTGGCTTCCTTGTTA+GGG | - | chr4.2:11708349-11708368 | MS.gene57346:intron | 30.0% |
| !! | TATTTACCTTGGCTTTTTGT+AGG | + | chr4.2:11704980-11704999 | None:intergenic | 30.0% |
| !! | TGAGCAATTGCTTTTAGATA+AGG | - | chr4.2:11703838-11703857 | MS.gene57346:intron | 30.0% |
| !! | TGCTCTAAGATCAATGATTA+AGG | + | chr4.2:11705169-11705188 | None:intergenic | 30.0% |
| !! | TTGATAGGACTTTTATTTGC+CGG | - | chr4.2:11704891-11704910 | MS.gene57346:intron | 30.0% |
| !!! | AACTTTTTTTTGGTAGTGGT+CGG | + | chr4.2:11707130-11707149 | None:intergenic | 30.0% |
| !!! | ATATTTTAACCAACACTCCA+AGG | + | chr4.2:11705053-11705072 | None:intergenic | 30.0% |
| AAACCTATGTTGCATAGGTA+TGG | - | chr4.2:11708406-11708425 | MS.gene57346:intron | 35.0% | |
| AACCTATGTTGCATAGGTAT+GGG | - | chr4.2:11708407-11708426 | MS.gene57346:intron | 35.0% | |
| AACTTATGCATTGCATAGGT+TGG | - | chr4.2:11709156-11709175 | MS.gene57346:CDS | 35.0% | |
| AATCATTGATCTTAGAGCAC+CGG | - | chr4.2:11705170-11705189 | MS.gene57346:intron | 35.0% | |
| ACAATATATGTACCCGGTAT+GGG | - | chr4.2:11708723-11708742 | MS.gene57346:intron | 35.0% | |
| ACAGAGTAAGTAGATCACAT+CGG | - | chr4.2:11703731-11703750 | MS.gene57346:intron | 35.0% | |
| ACATATCCTACAAAAAGCCA+AGG | - | chr4.2:11704971-11704990 | MS.gene57346:CDS | 35.0% | |
| ACCACCAAAAAAGTCTATAG+AGG | - | chr4.2:11706705-11706724 | MS.gene57346:intron | 35.0% | |
| ACGAGTACAATATATGTACC+CGG | - | chr4.2:11708717-11708736 | MS.gene57346:intron | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | - | chr4.2:11705405-11705424 | MS.gene57346:intron | 35.0% | |
| AGAAATCTTGAAGACAAGAC+CGG | - | chr4.2:11707346-11707365 | MS.gene57346:intron | 35.0% | |
| AGACCTTTATAACCTTAGCA+AGG | + | chr4.2:11709243-11709262 | None:intergenic | 35.0% | |
| AGTTCAAACCTATGTTGCAT+AGG | - | chr4.2:11708401-11708420 | MS.gene57346:intron | 35.0% | |
| AGTTTGAACCTCATAAGCAT+GGG | + | chr4.2:11708769-11708788 | None:intergenic | 35.0% | |
| ATCATTTCCTCCTTAACTAC+AGG | - | chr4.2:11708062-11708081 | MS.gene57346:intron | 35.0% | |
| ATCTACAAAACTCACGTGTA+TGG | - | chr4.2:11703104-11703123 | MS.gene57346:CDS | 35.0% | |
| CAACTTACTTTCCATCTAGA+AGG | + | chr4.2:11707792-11707811 | None:intergenic | 35.0% | |
| CACAACAACGTGAAAAATGA+AGG | - | chr4.2:11706224-11706243 | MS.gene57346:intron | 35.0% | |
| CAGTCCAAAGAGAAAAACTA+CGG | + | chr4.2:11704378-11704397 | None:intergenic | 35.0% | |
| CATCGGATATATAGTCTTTC+GGG | - | chr4.2:11703748-11703767 | MS.gene57346:intron | 35.0% | |
| CATGCTAGACAATTCTTCTA+AGG | + | chr4.2:11703363-11703382 | None:intergenic | 35.0% | |
| CCACCAAAAAAGTCTATAGA+GGG | - | chr4.2:11706706-11706725 | MS.gene57346:intron | 35.0% | |
| CTAGTTTCAGAGATGTAAGA+AGG | + | chr4.2:11708136-11708155 | None:intergenic | 35.0% | |
| CTGGAAATCAAAGATGAGAA+TGG | - | chr4.2:11704834-11704853 | MS.gene57346:intron | 35.0% | |
| CTTCTAGATGGAAAGTAAGT+TGG | - | chr4.2:11707790-11707809 | MS.gene57346:intron | 35.0% | |
| GAGAAAACACATTCCTGTAT+TGG | + | chr4.2:11703817-11703836 | None:intergenic | 35.0% | |
| GAGATGTAAGAAGGTCAAAA+TGG | + | chr4.2:11708127-11708146 | None:intergenic | 35.0% | |
| GTTATCTCATACCAAAAGGA+TGG | - | chr4.2:11707697-11707716 | MS.gene57346:intron | 35.0% | |
| TAAGCATGGGACTTGTAAAA+AGG | + | chr4.2:11708756-11708775 | None:intergenic | 35.0% | |
| TAATGAACTCCAAGCAACAA+TGG | - | chr4.2:11706466-11706485 | MS.gene57346:intron | 35.0% | |
| TACAATATATGTACCCGGTA+TGG | - | chr4.2:11708722-11708741 | MS.gene57346:intron | 35.0% | |
| TACAATCTTTCACCCTAACA+AGG | + | chr4.2:11708364-11708383 | None:intergenic | 35.0% | |
| TAGAAGTTCCCATGAAAACA+TGG | + | chr4.2:11703442-11703461 | None:intergenic | 35.0% | |
| TAGTTTGAACCTCATAAGCA+TGG | + | chr4.2:11708770-11708789 | None:intergenic | 35.0% | |
| TATTGAAAGCTGCCAATTGA+AGG | + | chr4.2:11708319-11708338 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr4.2:11705422-11705441 | MS.gene57346:intron | 35.0% | |
| TCCCATGAAAACATGGATAA+TGG | + | chr4.2:11703435-11703454 | None:intergenic | 35.0% | |
| TCTTAAGTCTCGAAAAGTTG+AGG | - | chr4.2:11703790-11703809 | MS.gene57346:intron | 35.0% | |
| TGAGAATGGTAGAAAATTGG+AGG | - | chr4.2:11704848-11704867 | MS.gene57346:intron | 35.0% | |
| TGCCTCTCGAAAAATTGAAA+AGG | + | chr4.2:11707554-11707573 | None:intergenic | 35.0% | |
| TTACCAAGGAAACAACATTC+CGG | + | chr4.2:11706594-11706613 | None:intergenic | 35.0% | |
| TTTGCATGATATTGTAGGCA+CGG | - | chr4.2:11704709-11704728 | MS.gene57346:intron | 35.0% | |
| ! | ATTAGCACTTTCCATCCTTT+TGG | + | chr4.2:11707711-11707730 | None:intergenic | 35.0% |
| ! | GATTATCGCCACATTGTTTT+GGG | - | chr4.2:11704403-11704422 | MS.gene57346:intron | 35.0% |
| ! | GTAAGAAATGGGTTTAGTGT+GGG | - | chr4.2:11705217-11705236 | MS.gene57346:intron | 35.0% |
| ! | GTCTACATTTTGTCAACTCT+AGG | + | chr4.2:11703220-11703239 | None:intergenic | 35.0% |
| ! | GTTAGTTGATACGAAACAGA+TGG | + | chr4.2:11705743-11705762 | None:intergenic | 35.0% |
| ! | TGAATGCTAACCATTTTCCT+TGG | - | chr4.2:11705033-11705052 | MS.gene57346:intron | 35.0% |
| ! | TGGAAACTTAAGTTTTTCCG+AGG | - | chr4.2:11706073-11706092 | MS.gene57346:intron | 35.0% |
| ! | TGTAAGAAATGGGTTTAGTG+TGG | - | chr4.2:11705216-11705235 | MS.gene57346:intron | 35.0% |
| ! | TTTTTCTCTTTGGACTGTCT+CGG | - | chr4.2:11704381-11704400 | MS.gene57346:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.2:11709009-11709028 | MS.gene57346:CDS | 35.0% |
| !! | AAGGATGGAAAGTGCTAATA+TGG | - | chr4.2:11707712-11707731 | MS.gene57346:intron | 35.0% |
| !! | ACATTTTGTCAACTCTAGGA+TGG | + | chr4.2:11703216-11703235 | None:intergenic | 35.0% |
| !! | AGGATGGAAAGTGCTAATAT+GGG | - | chr4.2:11707713-11707732 | MS.gene57346:intron | 35.0% |
| !! | GATATCAGTGACTTGTTGAT+AGG | - | chr4.2:11704876-11704895 | MS.gene57346:intron | 35.0% |
| !! | TTGAAACGGATGGAGTATTT+TGG | + | chr4.2:11708795-11708814 | None:intergenic | 35.0% |
| !! | TTGGCTTTTTGTAGGATATG+TGG | + | chr4.2:11704972-11704991 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTTGGTAGTGGTC+GGG | + | chr4.2:11707129-11707148 | None:intergenic | 35.0% |
| !!! | CAACCCTCTATAGACTTTTT+TGG | + | chr4.2:11706712-11706731 | None:intergenic | 35.0% |
| !!! | TGCCTTTTCAATTTTTCGAG+AGG | - | chr4.2:11707549-11707568 | MS.gene57346:CDS | 35.0% |
| AACACCTTGTGACCAACAAT+GGG | + | chr4.2:11703299-11703318 | None:intergenic | 40.0% | |
| AACCAACACTCCAAGGAAAA+TGG | + | chr4.2:11705046-11705065 | None:intergenic | 40.0% | |
| AATTGAGCACTACCACTTGT+CGG | - | chr4.2:11706027-11706046 | MS.gene57346:intron | 40.0% | |
| ACATCTGATGTCAGCATCAA+CGG | - | chr4.2:11707574-11707593 | MS.gene57346:CDS | 40.0% | |
| AGTTGCTGTACTTTCATGTC+CGG | + | chr4.2:11704913-11704932 | None:intergenic | 40.0% | |
| ATCTCTTTCAAGAGCTCGAT+GGG | + | chr4.2:11703392-11703411 | None:intergenic | 40.0% | |
| ATGTTGCATAGGTATGGGTA+TGG | - | chr4.2:11708412-11708431 | MS.gene57346:intron | 40.0% | |
| ATTGTGGCAAGGTAGTAACA+CGG | + | chr4.2:11709201-11709220 | None:intergenic | 40.0% | |
| CTGCCTTGCTAAGGTTATAA+AGG | - | chr4.2:11709237-11709256 | MS.gene57346:CDS | 40.0% | |
| GAAAGATTGTAGCGATAGTG+AGG | - | chr4.2:11708373-11708392 | MS.gene57346:intron | 40.0% | |
| GACTAACGAAGTCTACATTC+AGG | - | chr4.2:11705404-11705423 | MS.gene57346:intron | 40.0% | |
| GACTTGCGACTTACAAATCA+AGG | + | chr4.2:11704104-11704123 | None:intergenic | 40.0% | |
| GATGAAGAGTTGAAGGAAAG+AGG | + | chr4.2:11708100-11708119 | None:intergenic | 40.0% | |
| GGGTACATATATTGTACTCG+TGG | + | chr4.2:11708718-11708737 | None:intergenic | 40.0% | |
| GGGTGAGAAGAAAGATCTTA+TGG | - | chr4.2:11704803-11704822 | MS.gene57346:CDS | 40.0% | |
| GTACTAGACATGCCTTCAAT+TGG | - | chr4.2:11708304-11708323 | MS.gene57346:intron | 40.0% | |
| GTCAATGACATGGTAAAGAG+AGG | + | chr4.2:11703608-11703627 | None:intergenic | 40.0% | |
| TAACACCTTGTGACCAACAA+TGG | + | chr4.2:11703300-11703319 | None:intergenic | 40.0% | |
| TACCCATACCTATGCAACAT+AGG | + | chr4.2:11708412-11708431 | None:intergenic | 40.0% | |
| TACGGAACCATCACAATCTA+AGG | + | chr4.2:11704360-11704379 | None:intergenic | 40.0% | |
| TACTTCCTACTCCAAAAGGA+AGG | + | chr4.2:11707991-11708010 | None:intergenic | 40.0% | |
| TGGTGAAGATGAAGAGTTGA+AGG | + | chr4.2:11708107-11708126 | None:intergenic | 40.0% | |
| TGTGCAGGATTATAATGCCA+AGG | - | chr4.2:11707955-11707974 | MS.gene57346:intron | 40.0% | |
| TTACAAGTCCCATGCTTATG+AGG | - | chr4.2:11708758-11708777 | MS.gene57346:intron | 40.0% | |
| TTAGCAAGGCAGTTATCAGT+GGG | + | chr4.2:11709229-11709248 | None:intergenic | 40.0% | |
| TTGACCGCTAACACTAATAG+CGG | + | chr4.2:11703934-11703953 | None:intergenic | 40.0% | |
| TTGTTCAACAGGACACTTGT+GGG | - | chr4.2:11705598-11705617 | MS.gene57346:intron | 40.0% | |
| TTTCCAATGATGACCAAGTC+TGG | + | chr4.2:11706059-11706078 | None:intergenic | 40.0% | |
| ! | AAAAGGTGAAGTACCCATAC+CGG | + | chr4.2:11708739-11708758 | None:intergenic | 40.0% |
| ! | AACCATTTTCCTTGGAGTGT+TGG | - | chr4.2:11705041-11705060 | MS.gene57346:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr4.2:11705302-11705321 | MS.gene57346:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr4.2:11705321-11705302 | None:intergenic | 40.0% |
| ! | GACATGAAAGTACAGCAACT+GGG | - | chr4.2:11704913-11704932 | MS.gene57346:intron | 40.0% |
| ! | GGATTATCGCCACATTGTTT+TGG | - | chr4.2:11704402-11704421 | MS.gene57346:intron | 40.0% |
| ! | GGTTCCGTAGTTTTTCTCTT+TGG | - | chr4.2:11704371-11704390 | MS.gene57346:CDS | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr4.2:11705301-11705320 | MS.gene57346:intron | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr4.2:11705320-11705301 | None:intergenic | 40.0% |
| ! | TTATCAGTGGGCTTACATTG+TGG | + | chr4.2:11709217-11709236 | None:intergenic | 40.0% |
| !! | GTAGACAAGTCGGTTTTGTA+TGG | - | chr4.2:11704019-11704038 | MS.gene57346:intron | 40.0% |
| !!! | CCCTCTATAGACTTTTTTGG+TGG | + | chr4.2:11706709-11706728 | None:intergenic | 40.0% |
| !!! | CGACATCATTTTGAAACGGA+TGG | + | chr4.2:11708805-11708824 | None:intergenic | 40.0% |
| !!! | CTTTTTTTTGGTAGTGGTCG+GGG | + | chr4.2:11707128-11707147 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.2:11709013-11709032 | MS.gene57346:CDS | 40.0% |
| !!! | GTCAACTCTAGGATGGATTT+TGG | + | chr4.2:11703209-11703228 | None:intergenic | 40.0% |
| !!! | TTCCTTTTGGAGTAGGAAGT+AGG | - | chr4.2:11707990-11708009 | MS.gene57346:intron | 40.0% |
| AACCTCCTTTCATCCACAAC+AGG | + | chr4.2:11704759-11704778 | None:intergenic | 45.0% | |
| AACCTGTTGTGGATGAAAGG+AGG | - | chr4.2:11704754-11704773 | MS.gene57346:intron | 45.0% | |
| AAGGTAGTAACACGGCAATC+TGG | + | chr4.2:11709193-11709212 | None:intergenic | 45.0% | |
| ACAAGTTGCGACACACTAAG+AGG | + | chr4.2:11706185-11706204 | None:intergenic | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr4.2:11705437-11705456 | MS.gene57346:intron | 45.0% | |
| AGCAAAACCAGGTGCATTGA+TGG | + | chr4.2:11703531-11703550 | None:intergenic | 45.0% | |
| AGCAACAATGGTTGGCAATG+CGG | - | chr4.2:11706478-11706497 | MS.gene57346:intron | 45.0% | |
| AGCACTCGCTTACACATATC+AGG | + | chr4.2:11703155-11703174 | None:intergenic | 45.0% | |
| AGCCTACTTCCTACTCCAAA+AGG | + | chr4.2:11707995-11708014 | None:intergenic | 45.0% | |
| AGGTAGTAACACGGCAATCT+GGG | + | chr4.2:11709192-11709211 | None:intergenic | 45.0% | |
| CAACAATGGGAGCAGTGATT+AGG | + | chr4.2:11703286-11703305 | None:intergenic | 45.0% | |
| CACAAGTGTCCTGTTGAACA+AGG | + | chr4.2:11705599-11705618 | None:intergenic | 45.0% | |
| CACTGATAACTGCCTTGCTA+AGG | - | chr4.2:11709228-11709247 | MS.gene57346:CDS | 45.0% | |
| CAGGATTATAATGCCAAGGC+AGG | - | chr4.2:11707959-11707978 | MS.gene57346:intron | 45.0% | |
| CATCTCTTTCAAGAGCTCGA+TGG | + | chr4.2:11703393-11703412 | None:intergenic | 45.0% | |
| CATTGCCAACCATTGTTGCT+TGG | + | chr4.2:11706478-11706497 | None:intergenic | 45.0% | |
| CTAATCACTGCTCCCATTGT+TGG | - | chr4.2:11703284-11703303 | MS.gene57346:intron | 45.0% | |
| CTTAGCAAGGCAGTTATCAG+TGG | + | chr4.2:11709230-11709249 | None:intergenic | 45.0% | |
| CTTGTTCAACAGGACACTTG+TGG | - | chr4.2:11705597-11705616 | MS.gene57346:intron | 45.0% | |
| GAAAAGTTGAGGCCCAATAC+AGG | - | chr4.2:11703801-11703820 | MS.gene57346:intron | 45.0% | |
| GAACTCCAAGCAACAATGGT+TGG | - | chr4.2:11706470-11706489 | MS.gene57346:intron | 45.0% | |
| GAAGAACCTTGAGTGCTTTG+TGG | + | chr4.2:11703556-11703575 | None:intergenic | 45.0% | |
| GAGATAAGTATCTGACTGGC+TGG | - | chr4.2:11704329-11704348 | MS.gene57346:CDS | 45.0% | |
| GAGTTGAAGGAAAGAGGAGA+TGG | + | chr4.2:11708094-11708113 | None:intergenic | 45.0% | |
| GCGTTCGAGACATCAATCAT+GGG | + | chr4.2:11703242-11703261 | None:intergenic | 45.0% | |
| GCTTTGTGGAAAGCAAAACC+AGG | + | chr4.2:11703542-11703561 | None:intergenic | 45.0% | |
| GGAACCATCACAATCTAAGG+AGG | + | chr4.2:11704357-11704376 | None:intergenic | 45.0% | |
| GGTTCCTCCTTAGATTGTGA+TGG | - | chr4.2:11704350-11704369 | MS.gene57346:CDS | 45.0% | |
| GTACAGCAACTGGGATAATG+TGG | - | chr4.2:11704922-11704941 | MS.gene57346:intron | 45.0% | |
| GTCAGCAAACCTTGTTCAAC+AGG | - | chr4.2:11705587-11705606 | MS.gene57346:intron | 45.0% | |
| TAGTGTTAGCGGTCAACACT+CGG | - | chr4.2:11703938-11703957 | MS.gene57346:intron | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr4.2:11705361-11705380 | MS.gene57346:intron | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr4.2:11705377-11705396 | None:intergenic | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr4.2:11705373-11705392 | MS.gene57346:intron | 45.0% | |
| TCCTACTCCAAAAGGAAGGA+AGG | + | chr4.2:11707987-11708006 | None:intergenic | 45.0% | |
| TCTCTTTCAAGAGCTCGATG+GGG | + | chr4.2:11703391-11703410 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGTT+GGG | - | chr4.2:11707067-11707086 | MS.gene57346:intron | 45.0% | |
| TGCAACCTGTTGTGGATGAA+AGG | - | chr4.2:11704751-11704770 | MS.gene57346:intron | 45.0% | |
| TGCGTTCGAGACATCAATCA+TGG | + | chr4.2:11703243-11703262 | None:intergenic | 45.0% | |
| ! | AAAGGTGAAGTACCCATACC+GGG | + | chr4.2:11708738-11708757 | None:intergenic | 45.0% |
| ! | CAAAACCAGGTGCATTGATG+GGG | + | chr4.2:11703529-11703548 | None:intergenic | 45.0% |
| ! | CAACCAGACTTGGTCATCAT+TGG | - | chr4.2:11706053-11706072 | MS.gene57346:intron | 45.0% |
| ! | GCAAAACCAGGTGCATTGAT+GGG | + | chr4.2:11703530-11703549 | None:intergenic | 45.0% |
| ! | GGACATGAAAGTACAGCAAC+TGG | - | chr4.2:11704912-11704931 | MS.gene57346:intron | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | chr4.2:11705303-11705322 | MS.gene57346:intron | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr4.2:11705322-11705303 | None:intergenic | 45.0% |
| ! | TGCTTTCCACAAAGCACTCA+AGG | - | chr4.2:11703547-11703566 | MS.gene57346:intron | 45.0% |
| !! | AAGTTTTGCTAAGTCGGCTC+CGG | + | chr4.2:11708023-11708042 | None:intergenic | 45.0% |
| !! | ACTTTGGTAACGGTTAGCCT+CGG | + | chr4.2:11706093-11706112 | None:intergenic | 45.0% |
| !! | ATGGTGCTGACCTGTAGTTA+AGG | + | chr4.2:11708075-11708094 | None:intergenic | 45.0% |
| !! | CTTCCGGAATGTTGTTTCCT+TGG | - | chr4.2:11706588-11706607 | MS.gene57346:intron | 45.0% |
| !! | TTGTCGGTTTCAACCAGACT+TGG | - | chr4.2:11706043-11706062 | MS.gene57346:intron | 45.0% |
| !!! | ACCTTCCTTCCTTTTGGAGT+AGG | - | chr4.2:11707983-11708002 | MS.gene57346:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.2:11709012-11709031 | MS.gene57346:CDS | 45.0% |
| ATAGGTATGGGTATGGCACC+TGG | - | chr4.2:11708419-11708438 | MS.gene57346:intron | 50.0% | |
| ATGGGCGAGAGCCATTCATA+TGG | - | chr4.2:11707731-11707750 | MS.gene57346:intron | 50.0% | |
| CAATGTCCTCGAGACGTTCT+AGG | + | chr4.2:11703331-11703350 | None:intergenic | 50.0% | |
| CATGTACCTAGAACGTCTCG+AGG | - | chr4.2:11703322-11703341 | MS.gene57346:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | - | chr4.2:11705529-11705548 | MS.gene57346:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | + | chr4.2:11705548-11705529 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr4.2:11705436-11705455 | MS.gene57346:intron | 50.0% | |
| GGTGGGATTTAGTCCCACAT+CGG | - | chr4.2:11703959-11703978 | MS.gene57346:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr4.2:11705378-11705397 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr4.2:11705372-11705391 | MS.gene57346:intron | 50.0% | |
| GTCTGGTTGAAACCGACAAG+TGG | + | chr4.2:11706042-11706061 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | - | chr4.2:11707066-11707085 | MS.gene57346:intron | 50.0% | |
| GTGGCCGCTATTAGTGTTAG+CGG | - | chr4.2:11703927-11703946 | MS.gene57346:intron | 50.0% | |
| TCTATCCCCATCAATGCACC+TGG | - | chr4.2:11703521-11703540 | MS.gene57346:intron | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | - | chr4.2:11705528-11705547 | MS.gene57346:intron | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | + | chr4.2:11705547-11705528 | None:intergenic | 50.0% | |
| TGCTCCCATTGTTGGTCACA+AGG | - | chr4.2:11703292-11703311 | MS.gene57346:intron | 50.0% | |
| ! | AGTGGGCTTACATTGTGGCA+AGG | + | chr4.2:11709212-11709231 | None:intergenic | 50.0% |
| ! | GCAGGAACCTTCCTTCCTTT+TGG | - | chr4.2:11707977-11707996 | MS.gene57346:intron | 50.0% |
| ! | GTGCTGACCTGTAGTTAAGG+AGG | + | chr4.2:11708072-11708091 | None:intergenic | 50.0% |
| !! | AGTTTTGCTAAGTCGGCTCC+GGG | + | chr4.2:11708022-11708041 | None:intergenic | 50.0% |
| !! | CTCAATCGTTTTTGGGAGGC+CGG | + | chr4.2:11707368-11707387 | None:intergenic | 50.0% |
| AGGAAGGAAGGTTCCTGCCT+TGG | + | chr4.2:11707975-11707994 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4.2:11707065-11707084 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4.2:11707062-11707081 | MS.gene57346:intron | 55.0% | |
| GTTAGCGGTCAACACTCGGT+GGG | - | chr4.2:11703942-11703961 | MS.gene57346:intron | 55.0% | |
| TGTTAGCGGTCAACACTCGG+TGG | - | chr4.2:11703941-11703960 | MS.gene57346:intron | 55.0% | |
| !! | GTTTTGCTAAGTCGGCTCCG+GGG | + | chr4.2:11708021-11708040 | None:intergenic | 55.0% |
| GTAGGAAGTAGGCTCTGCCC+CGG | - | chr4.2:11708001-11708020 | MS.gene57346:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 11703088 | 11709273 | 11703088 | ID=MS.gene57346 |
| chr4.2 | mRNA | 11703088 | 11709273 | 11703088 | ID=MS.gene57346.t1;Parent=MS.gene57346 |
| chr4.2 | exon | 11708793 | 11709273 | 11708793 | ID=MS.gene57346.t1.exon1;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11708793 | 11709273 | 11708793 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11707369 | 11707635 | 11707369 | ID=MS.gene57346.t1.exon2;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11707369 | 11707635 | 11707369 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11704937 | 11705026 | 11704937 | ID=MS.gene57346.t1.exon3;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11704937 | 11705026 | 11704937 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11704766 | 11704844 | 11704766 | ID=MS.gene57346.t1.exon4;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11704766 | 11704844 | 11704766 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11704558 | 11704664 | 11704558 | ID=MS.gene57346.t1.exon5;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11704558 | 11704664 | 11704558 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11704278 | 11704399 | 11704278 | ID=MS.gene57346.t1.exon6;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11704278 | 11704399 | 11704278 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| chr4.2 | exon | 11703088 | 11703187 | 11703088 | ID=MS.gene57346.t1.exon7;Parent=MS.gene57346.t1 |
| chr4.2 | CDS | 11703088 | 11703187 | 11703088 | ID=cds.MS.gene57346.t1;Parent=MS.gene57346.t1 |
| Gene Sequence |
| Protein sequence |
