Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57490.t1 | RHN40044.1 | 67.9 | 296 | 69 | 10 | 1 | 290 | 1 | 276 | 3.70E-100 | 374.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57490.t1 | Q7M443 | 35.0 | 274 | 151 | 9 | 14 | 280 | 2 | 255 | 6.3e-32 | 139.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57490.t1 | A0A396GKD7 | 67.9 | 296 | 69 | 10 | 1 | 290 | 1 | 276 | 2.7e-100 | 374.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051860 | MS.gene57490 | 0.826089 | 3.28E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene57490 | 0.810431 | 1.16E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene57490 | 0.814031 | 1.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57490.t1 | MTR_0002s0040 | 53.698 | 311 | 103 | 10 | 1 | 290 | 1 | 291 | 2.50e-95 | 283 |
| MS.gene57490.t1 | MTR_0263s0020 | 56.164 | 292 | 96 | 9 | 1 | 280 | 1 | 272 | 4.21e-94 | 280 |
| MS.gene57490.t1 | MTR_1457s0010 | 66.234 | 231 | 54 | 8 | 65 | 291 | 1 | 211 | 2.88e-93 | 275 |
| MS.gene57490.t1 | MTR_0002s1060 | 51.546 | 291 | 108 | 11 | 4 | 280 | 6 | 277 | 3.70e-75 | 232 |
| MS.gene57490.t1 | MTR_0062s0020 | 38.542 | 288 | 140 | 8 | 14 | 280 | 4 | 275 | 1.39e-48 | 164 |
| MS.gene57490.t1 | MTR_0062s0090 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 8.98e-48 | 161 |
| MS.gene57490.t1 | MTR_0062s0040 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 8.98e-48 | 161 |
| MS.gene57490.t1 | MTR_0062s0060 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 8.98e-48 | 161 |
| MS.gene57490.t1 | MTR_0443s0040 | 39.175 | 291 | 132 | 12 | 14 | 280 | 16 | 285 | 1.26e-47 | 161 |
| MS.gene57490.t1 | MTR_0062s0170 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_0062s0110 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_0062s0130 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_2g036240 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_2g036260 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_2g036290 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_8g046730 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 8.30e-39 | 139 |
| MS.gene57490.t1 | MTR_6g079630 | 34.182 | 275 | 156 | 8 | 12 | 280 | 32 | 287 | 3.22e-37 | 134 |
| MS.gene57490.t1 | MTR_2g096030 | 32.990 | 291 | 163 | 10 | 14 | 291 | 31 | 302 | 1.39e-33 | 124 |
| MS.gene57490.t1 | MTR_2g096040 | 33.202 | 253 | 145 | 6 | 39 | 283 | 26 | 262 | 2.08e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGAATATAAAAGATTT+TGG | 0.113401 | 8.3:-61447029 | None:intergenic |
| AATCGATTTCCATGTCATTT+TGG | 0.208877 | 8.3:+61447067 | MS.gene57490:CDS |
| ACCACAGTGACGATATTAAT+TGG | 0.223661 | 8.3:+61447540 | MS.gene57490:CDS |
| ATTTCGTTGTAGTCAATATC+AGG | 0.268052 | 8.3:-61447047 | None:intergenic |
| GGAGAGAAAGGATATTTAGT+AGG | 0.309124 | 8.3:-61447284 | None:intergenic |
| ATCCAAGACTACACGTTTGA+TGG | 0.357506 | 8.3:+61447359 | MS.gene57490:CDS |
| TGTAGTGTTCATTAGTTTCA+TGG | 0.361129 | 8.3:-61447502 | None:intergenic |
| GAGAGAAAGGATATTTAGTA+GGG | 0.368934 | 8.3:-61447283 | None:intergenic |
| GTTGGAGAAATCTTCTTCAT+TGG | 0.372094 | 8.3:-61447411 | None:intergenic |
| GAATCGATCAACAGTGTTAC+CGG | 0.376698 | 8.3:-61446973 | None:intergenic |
| AAGATTTCTCCAACTACGTT+GGG | 0.393833 | 8.3:+61447420 | MS.gene57490:CDS |
| CATCTTCGTTGTAAGTCTCA+TGG | 0.421031 | 8.3:-61447097 | None:intergenic |
| GTAGTGTTCATTAGTTTCAT+GGG | 0.454037 | 8.3:-61447501 | None:intergenic |
| GGTTAGGCTGCATGTAGAAT+TGG | 0.458886 | 8.3:-61447571 | None:intergenic |
| AACACTACAAGCTACTCTAC+AGG | 0.460172 | 8.3:+61447516 | MS.gene57490:CDS |
| CGGAAAATTCTATCCCGATT+GGG | 0.468618 | 8.3:+61447130 | MS.gene57490:CDS |
| CCACAGTGACGATATTAATT+GGG | 0.471394 | 8.3:+61447541 | MS.gene57490:CDS |
| TGCCATCAAACGTGTAGTCT+TGG | 0.476476 | 8.3:-61447361 | None:intergenic |
| CTAAGTACCACCTTGACCTT+GGG | 0.479326 | 8.3:-61447203 | None:intergenic |
| GATCGGTGCTTGCTCCTACT+AGG | 0.491839 | 8.3:-61447667 | None:intergenic |
| GCAGATATCAAGATCCCAAT+CGG | 0.494886 | 8.3:-61447144 | None:intergenic |
| TGTTCATTAGTTTCATGGGA+TGG | 0.496934 | 8.3:-61447497 | None:intergenic |
| TATAACGTCCCCAACGTAGT+TGG | 0.497459 | 8.3:-61447429 | None:intergenic |
| TTGCGAGTCTAACATAGATC+AGG | 0.504007 | 8.3:-61447619 | None:intergenic |
| CTGCGGTATACCACGTGTGC+AGG | 0.504725 | 8.3:+61447163 | MS.gene57490:CDS |
| CCGGAAAATTCTATCCCGAT+TGG | 0.509755 | 8.3:+61447129 | MS.gene57490:CDS |
| GCTAAGTACCACCTTGACCT+TGG | 0.518197 | 8.3:-61447204 | None:intergenic |
| TCAGTCTCGTCAGTGGGGTT+AGG | 0.532019 | 8.3:-61447587 | None:intergenic |
| ACGAAGACATCTAGTGGAAG+TGG | 0.532647 | 8.3:-61447710 | None:intergenic |
| CATGAGACTTACAACGAAGA+TGG | 0.533162 | 8.3:+61447098 | MS.gene57490:CDS |
| ATCTTCGTTGTAAGTCTCAT+GGG | 0.537135 | 8.3:-61447096 | None:intergenic |
| GAGAAAGGATATTTAGTAGG+GGG | 0.545897 | 8.3:-61447281 | None:intergenic |
| ACTTACAACGAAGATGGAAA+AGG | 0.547716 | 8.3:+61447104 | MS.gene57490:CDS |
| TACAAAGTCAGTCTCGTCAG+TGG | 0.547959 | 8.3:-61447594 | None:intergenic |
| ACAAAGTCAGTCTCGTCAGT+GGG | 0.548454 | 8.3:-61447593 | None:intergenic |
| GTCAAGGTGGTACTTAGCAT+TGG | 0.558729 | 8.3:+61447209 | MS.gene57490:CDS |
| TGATCTATGTTAGACTCGCA+AGG | 0.562801 | 8.3:+61447621 | MS.gene57490:CDS |
| GAAGATTTCTCCAACTACGT+TGG | 0.566238 | 8.3:+61447419 | MS.gene57490:CDS |
| ATTACGTCCGTCACGTGGAT+CGG | 0.567052 | 8.3:-61447684 | None:intergenic |
| TCGTGATATACAAAGTGTGC+AGG | 0.567577 | 8.3:+61447235 | MS.gene57490:CDS |
| AAGGTGGTACTTAGCATTGG+TGG | 0.572579 | 8.3:+61447212 | MS.gene57490:CDS |
| AGTTTCATGGGATGGAGCAA+TGG | 0.579271 | 8.3:-61447489 | None:intergenic |
| TTTCGTTGTAGTCAATATCA+GGG | 0.579571 | 8.3:-61447046 | None:intergenic |
| AACGAAGATGGAAAAGGCAC+CGG | 0.582283 | 8.3:+61447110 | MS.gene57490:CDS |
| CAGATATCAAGATCCCAATC+GGG | 0.583723 | 8.3:-61447143 | None:intergenic |
| CTCGCAACGAAGACATCTAG+TGG | 0.584791 | 8.3:-61447716 | None:intergenic |
| AGAGAAAGGATATTTAGTAG+GGG | 0.590103 | 8.3:-61447282 | None:intergenic |
| GGGCAAAGGCCAAAATGACA+TGG | 0.593006 | 8.3:-61447076 | None:intergenic |
| GCGTTGAACCTTCATGAGAT+CGG | 0.594521 | 8.3:-61447744 | None:intergenic |
| AAAAGACTCAAGGAAGAGGT+AGG | 0.596213 | 8.3:+61447452 | MS.gene57490:CDS |
| GGAACATTACGTCCGTCACG+TGG | 0.606987 | 8.3:-61447689 | None:intergenic |
| ACAATGTCTCATCTCATCAC+CGG | 0.607947 | 8.3:+61446954 | None:intergenic |
| GAGTTGCTCCGATCTCATGA+AGG | 0.616774 | 8.3:+61447736 | MS.gene57490:CDS |
| CTCATGAAGGTTCAACGCAG+TGG | 0.621602 | 8.3:+61447749 | MS.gene57490:CDS |
| GTTGTAAGTCTCATGGGCAA+AGG | 0.623453 | 8.3:-61447090 | None:intergenic |
| GATCTATGTTAGACTCGCAA+GGG | 0.624736 | 8.3:+61447622 | MS.gene57490:CDS |
| GCTCAAGTATCCCAAGGTCA+AGG | 0.636705 | 8.3:+61447193 | MS.gene57490:CDS |
| ACACTACAAGCTACTCTACA+GGG | 0.639330 | 8.3:+61447517 | MS.gene57490:CDS |
| AGCTTGATATCCTGCACACG+TGG | 0.641314 | 8.3:-61447173 | None:intergenic |
| ATCGACGGCATTATCACACC+AGG | 0.643275 | 8.3:-61447321 | None:intergenic |
| GCAAGCACCGATCCACGTGA+CGG | 0.658997 | 8.3:+61447677 | MS.gene57490:CDS |
| AGATTTCTCCAACTACGTTG+GGG | 0.668094 | 8.3:+61447421 | MS.gene57490:CDS |
| TATCAAGCTCAAGTATCCCA+AGG | 0.668476 | 8.3:+61447187 | MS.gene57490:CDS |
| CCCAATTAATATCGTCACTG+TGG | 0.680315 | 8.3:-61447541 | None:intergenic |
| GCAGGATATCATCAAGCACA+AGG | 0.687092 | 8.3:+61447253 | MS.gene57490:CDS |
| CAAGTATCCCAAGGTCAAGG+TGG | 0.692556 | 8.3:+61447196 | MS.gene57490:CDS |
| CAAAGTCAGTCTCGTCAGTG+GGG | 0.694670 | 8.3:-61447592 | None:intergenic |
| GATTGGGATCTTGATATCTG+CGG | 0.706223 | 8.3:+61447146 | MS.gene57490:CDS |
| GGAAGAGGTAGGTATCAATG+TGG | 0.752690 | 8.3:+61447463 | MS.gene57490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAAGATTTTGGGTA+TGG | - | chr8.3:61447026-61447045 | None:intergenic | 20.0% |
| !! | CAGGGAATATAAAAGATTTT+GGG | - | chr8.3:61447031-61447050 | None:intergenic | 25.0% |
| !! | TCAGGGAATATAAAAGATTT+TGG | - | chr8.3:61447032-61447051 | None:intergenic | 25.0% |
| !! | TTCATTTTACGAGAATACAT+TGG | + | chr8.3:61446993-61447012 | MS.gene57490:CDS | 25.0% |
| AGAGAAAGGATATTTAGTAG+GGG | - | chr8.3:61447285-61447304 | None:intergenic | 30.0% | |
| ATTTCGTTGTAGTCAATATC+AGG | - | chr8.3:61447050-61447069 | None:intergenic | 30.0% | |
| GAGAGAAAGGATATTTAGTA+GGG | - | chr8.3:61447286-61447305 | None:intergenic | 30.0% | |
| TATAAAAAGACTCAAGGAAG+AGG | + | chr8.3:61447448-61447467 | MS.gene57490:CDS | 30.0% | |
| TTTCGTTGTAGTCAATATCA+GGG | - | chr8.3:61447049-61447068 | None:intergenic | 30.0% | |
| ! | GTAGTGTTCATTAGTTTCAT+GGG | - | chr8.3:61447504-61447523 | None:intergenic | 30.0% |
| ! | TGTAGTGTTCATTAGTTTCA+TGG | - | chr8.3:61447505-61447524 | None:intergenic | 30.0% |
| !! | AATCGATTTCCATGTCATTT+TGG | + | chr8.3:61447067-61447086 | MS.gene57490:CDS | 30.0% |
| !! | ACTTTTGAAAAACTCCTAGT+AGG | + | chr8.3:61447653-61447672 | MS.gene57490:CDS | 30.0% |
| !!! | TCTTTTTCAATAGGAGAGAA+AGG | - | chr8.3:61447299-61447318 | None:intergenic | 30.0% |
| AAGATTTCTCCAACTACGTT+GGG | + | chr8.3:61447420-61447439 | MS.gene57490:CDS | 35.0% | |
| ACCACAGTGACGATATTAAT+TGG | + | chr8.3:61447540-61447559 | MS.gene57490:CDS | 35.0% | |
| ACTTACAACGAAGATGGAAA+AGG | + | chr8.3:61447104-61447123 | MS.gene57490:CDS | 35.0% | |
| ATCTTCGTTGTAAGTCTCAT+GGG | - | chr8.3:61447099-61447118 | None:intergenic | 35.0% | |
| CCACAGTGACGATATTAATT+GGG | + | chr8.3:61447541-61447560 | MS.gene57490:CDS | 35.0% | |
| CTCCTATTGAAAAAGAATCC+TGG | + | chr8.3:61447303-61447322 | MS.gene57490:CDS | 35.0% | |
| GAGAAAGGATATTTAGTAGG+GGG | - | chr8.3:61447284-61447303 | None:intergenic | 35.0% | |
| GGACGTTATAAAAAGACTCA+AGG | + | chr8.3:61447442-61447461 | MS.gene57490:CDS | 35.0% | |
| GGAGAGAAAGGATATTTAGT+AGG | - | chr8.3:61447287-61447306 | None:intergenic | 35.0% | |
| GTTGGAGAAATCTTCTTCAT+TGG | - | chr8.3:61447414-61447433 | None:intergenic | 35.0% | |
| ! | TGTTCATTAGTTTCATGGGA+TGG | - | chr8.3:61447500-61447519 | None:intergenic | 35.0% |
| !!! | CACCAGGATTCTTTTTCAAT+AGG | - | chr8.3:61447308-61447327 | None:intergenic | 35.0% |
| AAAAGACTCAAGGAAGAGGT+AGG | + | chr8.3:61447452-61447471 | MS.gene57490:CDS | 40.0% | |
| AACACTACAAGCTACTCTAC+AGG | + | chr8.3:61447516-61447535 | MS.gene57490:CDS | 40.0% | |
| ACACTACAAGCTACTCTACA+GGG | + | chr8.3:61447517-61447536 | MS.gene57490:CDS | 40.0% | |
| AGATTTCTCCAACTACGTTG+GGG | + | chr8.3:61447421-61447440 | MS.gene57490:CDS | 40.0% | |
| ATCCAAGACTACACGTTTGA+TGG | + | chr8.3:61447359-61447378 | MS.gene57490:CDS | 40.0% | |
| CAGATATCAAGATCCCAATC+GGG | - | chr8.3:61447146-61447165 | None:intergenic | 40.0% | |
| CATCTTCGTTGTAAGTCTCA+TGG | - | chr8.3:61447100-61447119 | None:intergenic | 40.0% | |
| CATGAGACTTACAACGAAGA+TGG | + | chr8.3:61447098-61447117 | MS.gene57490:CDS | 40.0% | |
| CCCAATTAATATCGTCACTG+TGG | - | chr8.3:61447544-61447563 | None:intergenic | 40.0% | |
| CGGAAAATTCTATCCCGATT+GGG | + | chr8.3:61447130-61447149 | MS.gene57490:CDS | 40.0% | |
| GAAGATTTCTCCAACTACGT+TGG | + | chr8.3:61447419-61447438 | MS.gene57490:CDS | 40.0% | |
| GAATCGATCAACAGTGTTAC+CGG | - | chr8.3:61446976-61446995 | None:intergenic | 40.0% | |
| GATCTATGTTAGACTCGCAA+GGG | + | chr8.3:61447622-61447641 | MS.gene57490:CDS | 40.0% | |
| GATTGGGATCTTGATATCTG+CGG | + | chr8.3:61447146-61447165 | MS.gene57490:CDS | 40.0% | |
| GCAGATATCAAGATCCCAAT+CGG | - | chr8.3:61447147-61447166 | None:intergenic | 40.0% | |
| TATCAAGCTCAAGTATCCCA+AGG | + | chr8.3:61447187-61447206 | MS.gene57490:CDS | 40.0% | |
| TCGTGATATACAAAGTGTGC+AGG | + | chr8.3:61447235-61447254 | MS.gene57490:CDS | 40.0% | |
| TGATCTATGTTAGACTCGCA+AGG | + | chr8.3:61447621-61447640 | MS.gene57490:CDS | 40.0% | |
| TTGCGAGTCTAACATAGATC+AGG | - | chr8.3:61447622-61447641 | None:intergenic | 40.0% | |
| ! | AACGCAGTGGCATTTTCATT+TGG | + | chr8.3:61447762-61447781 | MS.gene57490:CDS | 40.0% |
| ! | CCAATCGGGATAGAATTTTC+CGG | - | chr8.3:61447132-61447151 | None:intergenic | 40.0% |
| !! | GATCTTTTTGAGCGAATCGA+CGG | - | chr8.3:61447339-61447358 | None:intergenic | 40.0% |
| ACAAAGTCAGTCTCGTCAGT+GGG | - | chr8.3:61447596-61447615 | None:intergenic | 45.0% | |
| ACGAAGACATCTAGTGGAAG+TGG | - | chr8.3:61447713-61447732 | None:intergenic | 45.0% | |
| AGTTTCATGGGATGGAGCAA+TGG | - | chr8.3:61447492-61447511 | None:intergenic | 45.0% | |
| CCGGAAAATTCTATCCCGAT+TGG | + | chr8.3:61447129-61447148 | MS.gene57490:CDS | 45.0% | |
| CTAAGTACCACCTTGACCTT+GGG | - | chr8.3:61447206-61447225 | None:intergenic | 45.0% | |
| GCAGGATATCATCAAGCACA+AGG | + | chr8.3:61447253-61447272 | MS.gene57490:CDS | 45.0% | |
| GCGTTGAACCTTCATGAGAT+CGG | - | chr8.3:61447747-61447766 | None:intergenic | 45.0% | |
| GGAAGAGGTAGGTATCAATG+TGG | + | chr8.3:61447463-61447482 | MS.gene57490:CDS | 45.0% | |
| GGTTAGGCTGCATGTAGAAT+TGG | - | chr8.3:61447574-61447593 | None:intergenic | 45.0% | |
| GTCAAGGTGGTACTTAGCAT+TGG | + | chr8.3:61447209-61447228 | MS.gene57490:CDS | 45.0% | |
| GTTGTAAGTCTCATGGGCAA+AGG | - | chr8.3:61447093-61447112 | None:intergenic | 45.0% | |
| TACAAAGTCAGTCTCGTCAG+TGG | - | chr8.3:61447597-61447616 | None:intergenic | 45.0% | |
| TATAACGTCCCCAACGTAGT+TGG | - | chr8.3:61447432-61447451 | None:intergenic | 45.0% | |
| TGCCATCAAACGTGTAGTCT+TGG | - | chr8.3:61447364-61447383 | None:intergenic | 45.0% | |
| ! | AACGAAGATGGAAAAGGCAC+CGG | + | chr8.3:61447110-61447129 | MS.gene57490:CDS | 45.0% |
| ! | AAGGTGGTACTTAGCATTGG+TGG | + | chr8.3:61447212-61447231 | MS.gene57490:CDS | 45.0% |
| AGCTTGATATCCTGCACACG+TGG | - | chr8.3:61447176-61447195 | None:intergenic | 50.0% | |
| ATCGACGGCATTATCACACC+AGG | - | chr8.3:61447324-61447343 | None:intergenic | 50.0% | |
| ATTACGTCCGTCACGTGGAT+CGG | - | chr8.3:61447687-61447706 | None:intergenic | 50.0% | |
| CAAAGTCAGTCTCGTCAGTG+GGG | - | chr8.3:61447595-61447614 | None:intergenic | 50.0% | |
| CAAGTATCCCAAGGTCAAGG+TGG | + | chr8.3:61447196-61447215 | MS.gene57490:CDS | 50.0% | |
| CTCATGAAGGTTCAACGCAG+TGG | + | chr8.3:61447749-61447768 | MS.gene57490:CDS | 50.0% | |
| CTCGCAACGAAGACATCTAG+TGG | - | chr8.3:61447719-61447738 | None:intergenic | 50.0% | |
| GAGTTGCTCCGATCTCATGA+AGG | + | chr8.3:61447736-61447755 | MS.gene57490:CDS | 50.0% | |
| GCTAAGTACCACCTTGACCT+TGG | - | chr8.3:61447207-61447226 | None:intergenic | 50.0% | |
| GCTCAAGTATCCCAAGGTCA+AGG | + | chr8.3:61447193-61447212 | MS.gene57490:CDS | 50.0% | |
| GGGCAAAGGCCAAAATGACA+TGG | - | chr8.3:61447079-61447098 | None:intergenic | 50.0% | |
| GGAACATTACGTCCGTCACG+TGG | - | chr8.3:61447692-61447711 | None:intergenic | 55.0% | |
| TCAGTCTCGTCAGTGGGGTT+AGG | - | chr8.3:61447590-61447609 | None:intergenic | 55.0% | |
| ! | GATCGGTGCTTGCTCCTACT+AGG | - | chr8.3:61447670-61447689 | None:intergenic | 55.0% |
| CTGCGGTATACCACGTGTGC+AGG | + | chr8.3:61447163-61447182 | MS.gene57490:CDS | 60.0% | |
| !! | GCAAGCACCGATCCACGTGA+CGG | + | chr8.3:61447677-61447696 | MS.gene57490:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 61446957 | 61447836 | 61446957 | ID=MS.gene57490 |
| chr8.3 | mRNA | 61446957 | 61447836 | 61446957 | ID=MS.gene57490.t1;Parent=MS.gene57490 |
| chr8.3 | exon | 61446957 | 61447836 | 61446957 | ID=MS.gene57490.t1.exon1;Parent=MS.gene57490.t1 |
| chr8.3 | CDS | 61446957 | 61447836 | 61446957 | ID=cds.MS.gene57490.t1;Parent=MS.gene57490.t1 |
| Gene Sequence |
| Protein sequence |
