Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57642.t1 | XP_013458482.1 | 95.4 | 527 | 23 | 1 | 1 | 526 | 1 | 527 | 9.00E-299 | 1035.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57642.t1 | Q9LTS3 | 55.1 | 515 | 224 | 3 | 12 | 526 | 12 | 519 | 5.4e-167 | 589.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57642.t1 | A0A072UTW0 | 95.4 | 527 | 23 | 1 | 1 | 526 | 1 | 527 | 6.5e-299 | 1035.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051862 | MS.gene57642 | 0.955445 | 2.98E-113 | -1.69E-46 |
| MS.gene053647 | MS.gene57642 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene05417 | MS.gene57642 | 0.817652 | 2.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57642.t1 | MTR_4g126150 | 95.446 | 527 | 23 | 1 | 1 | 526 | 1 | 527 | 0.0 | 1043 |
| MS.gene57642.t1 | MTR_2g039410 | 70.037 | 544 | 138 | 9 | 1 | 525 | 1 | 538 | 0.0 | 775 |
| MS.gene57642.t1 | MTR_4g126160 | 57.062 | 531 | 209 | 6 | 1 | 525 | 1 | 518 | 0.0 | 620 |
| MS.gene57642.t1 | MTR_2g039340 | 58.367 | 490 | 190 | 5 | 44 | 524 | 37 | 521 | 0.0 | 586 |
| MS.gene57642.t1 | MTR_3g112350 | 49.808 | 522 | 241 | 11 | 12 | 525 | 15 | 523 | 3.46e-170 | 492 |
| MS.gene57642.t1 | MTR_4g044110 | 49.383 | 486 | 224 | 10 | 51 | 526 | 50 | 523 | 1.02e-163 | 475 |
| MS.gene57642.t1 | MTR_3g036100 | 49.585 | 482 | 224 | 10 | 51 | 526 | 74 | 542 | 1.20e-161 | 471 |
| MS.gene57642.t1 | MTR_7g090920 | 48.428 | 477 | 227 | 8 | 58 | 526 | 73 | 538 | 6.76e-160 | 466 |
| MS.gene57642.t1 | MTR_1g015410 | 40.519 | 501 | 276 | 10 | 36 | 526 | 17 | 505 | 8.87e-132 | 393 |
| MS.gene57642.t1 | MTR_0005s0070 | 50.182 | 275 | 122 | 8 | 71 | 340 | 1 | 265 | 5.86e-86 | 267 |
| MS.gene57642.t1 | MTR_2g039360 | 38.202 | 89 | 54 | 1 | 439 | 526 | 76 | 164 | 1.05e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57642.t1 | AT5G56970 | 56.911 | 492 | 205 | 3 | 35 | 526 | 35 | 519 | 0.0 | 588 |
| MS.gene57642.t1 | AT4G29740 | 50.189 | 528 | 238 | 9 | 11 | 525 | 9 | 524 | 0.0 | 522 |
| MS.gene57642.t1 | AT1G75450 | 49.905 | 529 | 236 | 10 | 9 | 524 | 8 | 520 | 1.62e-180 | 518 |
| MS.gene57642.t1 | AT1G75450 | 49.718 | 531 | 237 | 11 | 9 | 525 | 4 | 518 | 1.12e-178 | 513 |
| MS.gene57642.t1 | AT2G19500 | 48.269 | 520 | 237 | 6 | 13 | 524 | 6 | 501 | 3.66e-172 | 496 |
| MS.gene57642.t1 | AT3G63440 | 47.170 | 477 | 236 | 6 | 58 | 526 | 60 | 528 | 1.02e-160 | 468 |
| MS.gene57642.t1 | AT2G41510 | 47.699 | 478 | 227 | 9 | 59 | 526 | 77 | 541 | 1.56e-160 | 469 |
| MS.gene57642.t1 | AT2G41510 | 47.599 | 479 | 228 | 9 | 58 | 526 | 138 | 603 | 1.02e-159 | 469 |
| MS.gene57642.t1 | AT5G56970 | 55.051 | 396 | 171 | 3 | 35 | 430 | 35 | 423 | 1.41e-153 | 445 |
| MS.gene57642.t1 | AT5G21482 | 44.764 | 487 | 239 | 10 | 57 | 526 | 49 | 522 | 1.36e-139 | 413 |
| MS.gene57642.t1 | AT4G29740 | 50.000 | 432 | 192 | 8 | 11 | 430 | 9 | 428 | 1.56e-139 | 410 |
| MS.gene57642.t1 | AT2G41510 | 48.936 | 376 | 178 | 7 | 58 | 430 | 76 | 440 | 7.81e-123 | 367 |
| MS.gene57642.t1 | AT4G29740 | 50.000 | 342 | 147 | 8 | 11 | 340 | 9 | 338 | 2.50e-102 | 312 |
Find 103 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCAATATTTGAGATTT+TGG | 0.091010 | 8.3:+4341411 | None:intergenic |
| ACTCAAGTGGATTTGATAAT+TGG | 0.142815 | 8.3:-4341100 | MS.gene57642:CDS |
| AGAGGATCTCCAATTATTTA+TGG | 0.156095 | 8.3:+4342064 | None:intergenic |
| ATGGACTTGCACCTGTTTCT+TGG | 0.217615 | 8.3:-4345311 | MS.gene57642:CDS |
| GTTATTAAAGAAGCTATTCT+AGG | 0.268705 | 8.3:+4342017 | None:intergenic |
| CTTGGAGGTTTAGGACAATT+TGG | 0.270154 | 8.3:-4343585 | MS.gene57642:CDS |
| AGTTATTAGTAGTATGAAAT+AGG | 0.276115 | 8.3:+4345773 | None:intergenic |
| CACTAAATGGAAGAGTTTCT+TGG | 0.279225 | 8.3:-4340961 | MS.gene57642:CDS |
| CATACCAAAATCTCAAATAT+TGG | 0.281178 | 8.3:-4341415 | MS.gene57642:CDS |
| GATTAACCGTTCCTGATCTT+TGG | 0.286822 | 8.3:+4342145 | None:intergenic |
| CACGCGGTTCTTGGAGGTTT+AGG | 0.307047 | 8.3:-4343594 | MS.gene57642:CDS |
| GTTATGGAGTTTGGTTGATA+TGG | 0.310768 | 8.3:+4345671 | None:intergenic |
| TTTAGGGTCGTTATGGAGTT+TGG | 0.311295 | 8.3:+4345662 | None:intergenic |
| TGATCATCAATCCGAGAAAA+TGG | 0.314927 | 8.3:-4341952 | MS.gene57642:CDS |
| AACAAGGCTCCATAAATAAT+TGG | 0.334966 | 8.3:-4342073 | MS.gene57642:CDS |
| GAGTTATATCACGCGGTTCT+TGG | 0.336072 | 8.3:-4343603 | MS.gene57642:CDS |
| TGGACTTCATTATGAGAAAA+AGG | 0.342313 | 8.3:-4341535 | MS.gene57642:CDS |
| AAAATTGCTTCTAGTGACTA+TGG | 0.343388 | 8.3:-4345633 | MS.gene57642:CDS |
| AATCACCAACGTTCATGAAT+TGG | 0.351836 | 8.3:-4345208 | MS.gene57642:CDS |
| CTTTCCAATGCTGGAATTAG+TGG | 0.355413 | 8.3:-4345255 | MS.gene57642:CDS |
| GTCTTTGAACACCCTTTGAT+TGG | 0.390776 | 8.3:-4345396 | MS.gene57642:CDS |
| ATAATGAAGTCCAGGGATAT+AGG | 0.394085 | 8.3:+4341545 | None:intergenic |
| TCTTCTTGTGTGCTGTGGTT+AGG | 0.411365 | 8.3:+4341002 | None:intergenic |
| ATTGGTTACTATGTTGATGT+TGG | 0.419823 | 8.3:-4345378 | MS.gene57642:CDS |
| AGTGGTCAGACGTTTCTTTA+CGG | 0.421013 | 8.3:-4345237 | MS.gene57642:CDS |
| GCAGTAGATAATGCTGTGTT+TGG | 0.425996 | 8.3:+4341995 | None:intergenic |
| ATGTTGGAGGAGAACAACTA+TGG | 0.426776 | 8.3:-4345362 | MS.gene57642:CDS |
| AGATAATCAGTCCAAGAAAC+AGG | 0.436827 | 8.3:+4345300 | None:intergenic |
| TCATGAACGTTGGTGATTTG+AGG | 0.440824 | 8.3:+4345213 | None:intergenic |
| TTCCTACGGTGGATATCAAA+CGG | 0.445255 | 8.3:+4345745 | None:intergenic |
| CATAATATGTAGCAAATTCA+AGG | 0.448202 | 8.3:+4341973 | None:intergenic |
| AGTCATGGCTTGTCCATTAG+TGG | 0.449428 | 8.3:+4345482 | None:intergenic |
| TCCTACGGTGGATATCAAAC+GGG | 0.453698 | 8.3:+4345746 | None:intergenic |
| CAGTATAACCGTACCGTTGT+GGG | 0.463521 | 8.3:+4343525 | None:intergenic |
| ACCACAGCACACAAGAAGAT+TGG | 0.465569 | 8.3:-4340998 | MS.gene57642:CDS |
| AACCGTACCGTTGTGGGAGC+TGG | 0.467417 | 8.3:+4343531 | None:intergenic |
| GCTTCAGAAAACAAAGAAAA+GGG | 0.468438 | 8.3:-4345431 | MS.gene57642:CDS |
| ATTATGTCTTGTATAGAAGA+TGG | 0.477377 | 8.3:+4345573 | None:intergenic |
| GTGTTAACATTGGCTAGCTC+TGG | 0.478418 | 8.3:+4345693 | None:intergenic |
| TCCAATCTTCTTGTGTGCTG+TGG | 0.478791 | 8.3:+4340997 | None:intergenic |
| AGCTTCAGAAAACAAAGAAA+AGG | 0.480651 | 8.3:-4345432 | MS.gene57642:CDS |
| GGACAAGGTCACTCCACTAA+TGG | 0.483867 | 8.3:-4345495 | MS.gene57642:CDS |
| AGTGGAGTGACCTTGTCCTC+TGG | 0.485073 | 8.3:+4345500 | None:intergenic |
| CATCACCAGTGGAACTGTCT+TGG | 0.486622 | 8.3:-4341349 | MS.gene57642:CDS |
| GAACGGTTAATCTCAATCAA+TGG | 0.491339 | 8.3:-4342134 | MS.gene57642:CDS |
| GGAGGAACACTTTCCAATGC+TGG | 0.491967 | 8.3:-4345264 | MS.gene57642:CDS |
| TCCAGGTGATAAAATCATCC+TGG | 0.493495 | 8.3:+4340917 | None:intergenic |
| TTCTAGGATGGTCAGATTGA+GGG | 0.495813 | 8.3:+4342033 | None:intergenic |
| AGCTTCAGTCACAAGGATTG+TGG | 0.497703 | 8.3:-4341467 | MS.gene57642:CDS |
| GAGGATGTCTTCTACACAGT+TGG | 0.497926 | 8.3:-4341131 | MS.gene57642:CDS |
| TATCTTTACCTGACGGTTGG+AGG | 0.504841 | 8.3:-4345282 | MS.gene57642:CDS |
| GGTATGAATAAATTAAGCCA+TGG | 0.512499 | 8.3:+4341432 | None:intergenic |
| GCTTCAGTCACAAGGATTGT+GGG | 0.515662 | 8.3:-4341466 | MS.gene57642:CDS |
| ATTCTAGGATGGTCAGATTG+AGG | 0.517004 | 8.3:+4342032 | None:intergenic |
| GATTATCTTTACCTGACGGT+TGG | 0.521491 | 8.3:-4345285 | MS.gene57642:CDS |
| TGTGGGAAGTTCCTCACCCA+TGG | 0.522276 | 8.3:-4341449 | MS.gene57642:CDS |
| GGTTACTATGTTGATGTTGG+AGG | 0.524528 | 8.3:-4345375 | MS.gene57642:CDS |
| AAAGTGTTCCTCCAACCGTC+AGG | 0.525441 | 8.3:+4345274 | None:intergenic |
| CAACATAGTAACCAATCAAA+GGG | 0.525726 | 8.3:+4345385 | None:intergenic |
| GACTGATTATCTTTACCTGA+CGG | 0.526021 | 8.3:-4345289 | MS.gene57642:CDS |
| TGGCATGTATACAGGTTAAG+TGG | 0.526926 | 8.3:-4342202 | MS.gene57642:intron |
| GGACAAGCCATGACTCATGA+TGG | 0.533340 | 8.3:-4345474 | MS.gene57642:CDS |
| TTAAATCCAGGTGGGACGAT+AGG | 0.539047 | 8.3:-4341175 | MS.gene57642:intron |
| GTTGGATTCTTACACTCAAG+TGG | 0.539696 | 8.3:-4341113 | MS.gene57642:CDS |
| TCAACATAGTAACCAATCAA+AGG | 0.543035 | 8.3:+4345384 | None:intergenic |
| GTGTAGAAGACATCCTCGTT+TGG | 0.543503 | 8.3:+4341137 | None:intergenic |
| GGTTGATATGGTGTTAACAT+TGG | 0.549802 | 8.3:+4345683 | None:intergenic |
| CTGACCACTAATTCCAGCAT+TGG | 0.549832 | 8.3:+4345251 | None:intergenic |
| TTAACATTGGCTAGCTCTGG+TGG | 0.549917 | 8.3:+4345696 | None:intergenic |
| TTATATCACGCGGTTCTTGG+AGG | 0.553109 | 8.3:-4343600 | MS.gene57642:CDS |
| GGTTAATCTCAATCAATGGA+AGG | 0.556622 | 8.3:-4342130 | MS.gene57642:CDS |
| GACAATTTGGAGTTATAACA+AGG | 0.558388 | 8.3:-4343572 | MS.gene57642:CDS |
| TTAAAGAAGCTATTCTAGGA+TGG | 0.561768 | 8.3:+4342021 | None:intergenic |
| GTATGAATAAATTAAGCCAT+GGG | 0.562092 | 8.3:+4341433 | None:intergenic |
| CAAGGACTAGCCTATATCCC+TGG | 0.572971 | 8.3:-4341555 | MS.gene57642:CDS |
| CCAGGTGATAAAATCATCCT+GGG | 0.575746 | 8.3:+4340918 | None:intergenic |
| CCTCTGGCTGCTATAGTGAA+AGG | 0.577125 | 8.3:+4345516 | None:intergenic |
| GTTAATCTCAATCAATGGAA+GGG | 0.578188 | 8.3:-4342129 | MS.gene57642:CDS |
| CATGAATTGGATGTGATCAC+TGG | 0.578924 | 8.3:-4345195 | MS.gene57642:intron |
| AGATTGAGGGAAGAAATTAG+AGG | 0.583674 | 8.3:+4342046 | None:intergenic |
| GAGTTGAAGCTTCAGTCACA+AGG | 0.583991 | 8.3:-4341474 | MS.gene57642:CDS |
| TACAATTCCATCATGAGTCA+TGG | 0.584996 | 8.3:+4345467 | None:intergenic |
| ACTATAGCAGCCAGAGGACA+AGG | 0.592829 | 8.3:-4345510 | MS.gene57642:CDS |
| TTGTATGCAACTCTTGAACA+TGG | 0.595290 | 8.3:-4345330 | MS.gene57642:CDS |
| ACAAGCACAAGTTTGATCCC+AGG | 0.598194 | 8.3:-4340935 | MS.gene57642:CDS |
| CACATCCAATTCATGAACGT+TGG | 0.603837 | 8.3:+4345203 | None:intergenic |
| AATAAATTAAGCCATGGGTG+AGG | 0.606021 | 8.3:+4341438 | None:intergenic |
| GTAAACCAAGACAGTTCCAC+TGG | 0.612320 | 8.3:+4341344 | None:intergenic |
| TTCTTGAATAGAGTCCGAAG+TGG | 0.613739 | 8.3:-4341498 | MS.gene57642:CDS |
| TCAGTATAACCGTACCGTTG+TGG | 0.626101 | 8.3:+4343524 | None:intergenic |
| ATCCGAGAAAATGGTGGACA+AGG | 0.628901 | 8.3:-4341943 | MS.gene57642:intron |
| CTTCAGAAAACAAAGAAAAG+GGG | 0.634602 | 8.3:-4345430 | MS.gene57642:CDS |
| ATTAAAAGAAACATCACCAG+TGG | 0.637357 | 8.3:-4341360 | MS.gene57642:CDS |
| GAAGCTTCAACTCTCCACTT+CGG | 0.640974 | 8.3:+4341484 | None:intergenic |
| ACAATTTGGAGTTATAACAA+GGG | 0.641357 | 8.3:-4343571 | MS.gene57642:CDS |
| TCATCAATCCGAGAAAATGG+TGG | 0.643829 | 8.3:-4341949 | MS.gene57642:CDS |
| GGGATGCTGCTAATGCAACA+AGG | 0.647362 | 8.3:-4342089 | MS.gene57642:CDS |
| CCTTTCACTATAGCAGCCAG+AGG | 0.662736 | 8.3:-4345516 | MS.gene57642:CDS |
| GAATTCAGAGTTATATCACG+CGG | 0.664876 | 8.3:-4343610 | MS.gene57642:CDS |
| TCTTCAGCCAGCTCCCACAA+CGG | 0.665337 | 8.3:-4343538 | MS.gene57642:intron |
| TGATGGAATTGTAGTTGACA+TGG | 0.672980 | 8.3:-4345457 | MS.gene57642:CDS |
| ACCCGTTTGATATCCACCGT+AGG | 0.704257 | 8.3:-4345747 | MS.gene57642:CDS |
| GTCAGCAATGATACCAAACG+AGG | 0.778680 | 8.3:-4341150 | MS.gene57642:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATATATTTTATCTTC+TGG | + | chr8.3:4345008-4345027 | None:intergenic | 10.0% |
| !!! | ATATAATCAACTTTTTTTAA+TGG | - | chr8.3:4341910-4341929 | MS.gene57642:intron | 10.0% |
| !!! | ATTTTTATCTTAAAAAGAAA+GGG | - | chr8.3:4342580-4342599 | MS.gene57642:intron | 10.0% |
| !!! | TAAAGTTTAATTTTATCATT+GGG | - | chr8.3:4344937-4344956 | MS.gene57642:intron | 10.0% |
| !!! | TATTTTTATCTTAAAAAGAA+AGG | - | chr8.3:4342579-4342598 | MS.gene57642:intron | 10.0% |
| !! | AATTAAAAAATTGAAGTCTT+GGG | + | chr8.3:4341984-4342003 | None:intergenic | 15.0% |
| !! | ACAAATAATTAATTAAGACT+TGG | + | chr8.3:4342864-4342883 | None:intergenic | 15.0% |
| !! | ATATTCACAAATGAATATAT+AGG | - | chr8.3:4343674-4343693 | MS.gene57642:intron | 15.0% |
| !! | ATTTAATTGAATAATAGTTG+TGG | - | chr8.3:4342997-4343016 | MS.gene57642:intron | 15.0% |
| !! | CAATGATAAAATTAAACTTT+AGG | + | chr8.3:4344938-4344957 | None:intergenic | 15.0% |
| !! | GTATACATAATTAAACAATA+CGG | + | chr8.3:4344422-4344441 | None:intergenic | 15.0% |
| !! | GTTAGTTGAATATATATATA+TGG | + | chr8.3:4342518-4342537 | None:intergenic | 15.0% |
| !! | TATACTTTAGTTAAAAAGTA+TGG | + | chr8.3:4343370-4343389 | None:intergenic | 15.0% |
| !!! | AAATATTTCACACTAATTTT+TGG | - | chr8.3:4341654-4341673 | MS.gene57642:intron | 15.0% |
| !!! | AACTATTATCTTTTTCAATT+AGG | + | chr8.3:4344808-4344827 | None:intergenic | 15.0% |
| !!! | AATCTTGTATTCTTTTTTTT+TGG | - | chr8.3:4344267-4344286 | MS.gene57642:intron | 15.0% |
| !!! | AATTACAATATTTTATCTCT+TGG | + | chr8.3:4345039-4345058 | None:intergenic | 15.0% |
| !!! | ATTGTATGAGATTTTAATTA+AGG | + | chr8.3:4341149-4341168 | None:intergenic | 15.0% |
| !!! | CTAAAGTTTAATTTTATCAT+TGG | - | chr8.3:4344936-4344955 | MS.gene57642:intron | 15.0% |
| !!! | GTGATTTTTGAATATTTATA+TGG | + | chr8.3:4344229-4344248 | None:intergenic | 15.0% |
| !!! | TCAATTTTTTAATTCAAACA+AGG | - | chr8.3:4341990-4342009 | MS.gene57642:CDS | 15.0% |
| !!! | TTAAAATTAGTCATCTTTTT+AGG | - | chr8.3:4343998-4344017 | MS.gene57642:intron | 15.0% |
| !!! | TTTCTTAAGTTTTTTCTATA+TGG | + | chr8.3:4342894-4342913 | None:intergenic | 15.0% |
| !! | AGTTATTAGTAGTATGAAAT+AGG | + | chr8.3:4340924-4340943 | None:intergenic | 20.0% |
| !! | ATTAAAGAAAATCCAATAGA+CGG | + | chr8.3:4344779-4344798 | None:intergenic | 20.0% |
| !! | ATTACATGAAATTTAAATCC+AGG | - | chr8.3:4345507-4345526 | MS.gene57642:CDS | 20.0% |
| !! | CAGCATTACTAATAATAATT+GGG | - | chr8.3:4342660-4342679 | MS.gene57642:intron | 20.0% |
| !! | GAATTAAAAAATTGAAGTCT+TGG | + | chr8.3:4341985-4342004 | None:intergenic | 20.0% |
| !! | GATAAATCATAATATATGCA+TGG | + | chr8.3:4344318-4344337 | None:intergenic | 20.0% |
| !! | GCGAGTTTATAAATATAAAT+AGG | - | chr8.3:4343790-4343809 | MS.gene57642:intron | 20.0% |
| !! | TCAGCATTACTAATAATAAT+TGG | - | chr8.3:4342659-4342678 | MS.gene57642:intron | 20.0% |
| !! | TTAGTATAAGACATTAGTAA+TGG | - | chr8.3:4344458-4344477 | MS.gene57642:intron | 20.0% |
| !! | TTTATGCACATTTAATGTTA+TGG | + | chr8.3:4341809-4341828 | None:intergenic | 20.0% |
| !!! | AAAAACTAAAATGACTTGTT+TGG | + | chr8.3:4343884-4343903 | None:intergenic | 20.0% |
| !!! | AAAACTAAAATGACTTGTTT+GGG | + | chr8.3:4343883-4343902 | None:intergenic | 20.0% |
| !!! | AAAAGATGACTAATTTTAAG+TGG | + | chr8.3:4343997-4344016 | None:intergenic | 20.0% |
| !!! | AAAATGTTGTTAACTTGTTA+TGG | - | chr8.3:4342465-4342484 | MS.gene57642:intron | 20.0% |
| !!! | AAAGATGACTAATTTTAAGT+GGG | + | chr8.3:4343996-4344015 | None:intergenic | 20.0% |
| !!! | AAATCCAATATTTGAGATTT+TGG | + | chr8.3:4345286-4345305 | None:intergenic | 20.0% |
| !!! | AAATGTTGTTAACTTGTTAT+GGG | - | chr8.3:4342466-4342485 | MS.gene57642:intron | 20.0% |
| !!! | AAGTTTTTATTTCCTTTTTG+CGG | + | chr8.3:4342069-4342088 | None:intergenic | 20.0% |
| !!! | AGTCATTATGTTTTTTTGTT+TGG | - | chr8.3:4342686-4342705 | MS.gene57642:intron | 20.0% |
| !!! | ATCTTGTATTCTAATTTTGA+CGG | - | chr8.3:4344367-4344386 | MS.gene57642:intron | 20.0% |
| !!! | CAAATATTGGATTTTAATTC+AGG | - | chr8.3:4345292-4345311 | MS.gene57642:CDS | 20.0% |
| !!! | TCTATGATATAATGGATTAT+TGG | - | chr8.3:4342031-4342050 | MS.gene57642:CDS | 20.0% |
| !!! | TCTTTATTTTTCTCTCTTTA+AGG | + | chr8.3:4342300-4342319 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTCTTTTTCTTTT+GGG | - | chr8.3:4342790-4342809 | MS.gene57642:intron | 20.0% |
| !!! | TTCTTTTTCTTTGTTTATGT+AGG | - | chr8.3:4345099-4345118 | MS.gene57642:intron | 20.0% |
| !!! | TTTTGATATAAGTTAACTCT+CGG | + | chr8.3:4342419-4342438 | None:intergenic | 20.0% |
| !!! | TTTTGTCACTTTTTCAAATT+TGG | - | chr8.3:4341562-4341581 | MS.gene57642:CDS | 20.0% |
| ! | AAGAAATTACTACTAAGAAG+CGG | - | chr8.3:4342908-4342927 | MS.gene57642:intron | 25.0% |
| ! | AATAGGTCAAATACATCTAA+AGG | - | chr8.3:4343807-4343826 | MS.gene57642:intron | 25.0% |
| ! | AATGGTAAATGTTAGTTGTT+AGG | - | chr8.3:4341928-4341947 | MS.gene57642:intron | 25.0% |
| ! | ACTAGTATTGTTAACATTCT+TGG | - | chr8.3:4343593-4343612 | MS.gene57642:CDS | 25.0% |
| ! | AGTATGAAATAGGTGAAAAA+AGG | + | chr8.3:4340914-4340933 | None:intergenic | 25.0% |
| ! | ATAGTCTTTGTCTATTCTAT+AGG | - | chr8.3:4342714-4342733 | MS.gene57642:intron | 25.0% |
| ! | ATTATGTCTTGTATAGAAGA+TGG | + | chr8.3:4341124-4341143 | None:intergenic | 25.0% |
| ! | ATTTGTATTTCTCTCTCTTA+AGG | + | chr8.3:4342197-4342216 | None:intergenic | 25.0% |
| ! | CATAATATGTAGCAAATTCA+AGG | + | chr8.3:4344724-4344743 | None:intergenic | 25.0% |
| ! | CATACCAAAATCTCAAATAT+TGG | - | chr8.3:4345279-4345298 | MS.gene57642:CDS | 25.0% |
| ! | CCTATTATAAATAGCATAGT+TGG | - | chr8.3:4343922-4343941 | MS.gene57642:intron | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | - | chr8.3:4344096-4344115 | MS.gene57642:intron | 25.0% |
| ! | GAAACTTAAAGGACTTATTT+GGG | - | chr8.3:4344136-4344155 | MS.gene57642:intron | 25.0% |
| ! | GAAACTTAAATGATCACTTT+GGG | - | chr8.3:4344165-4344184 | MS.gene57642:intron | 25.0% |
| ! | GAATATATATATATGGCAAC+TGG | + | chr8.3:4342511-4342530 | None:intergenic | 25.0% |
| ! | GTATGAAATAGGTGAAAAAA+GGG | + | chr8.3:4340913-4340932 | None:intergenic | 25.0% |
| ! | GTATGAATAAATTAAGCCAT+GGG | + | chr8.3:4345264-4345283 | None:intergenic | 25.0% |
| ! | GTTATTAAAGAAGCTATTCT+AGG | + | chr8.3:4344680-4344699 | None:intergenic | 25.0% |
| ! | TAATCCATTATATCATAGAG+AGG | + | chr8.3:4342030-4342049 | None:intergenic | 25.0% |
| ! | TATAGAATAGACAAAGACTA+TGG | + | chr8.3:4342715-4342734 | None:intergenic | 25.0% |
| ! | TATATATATGATCGACAACT+AGG | + | chr8.3:4343260-4343279 | None:intergenic | 25.0% |
| ! | TGAAACTTAAAGGACTTATT+TGG | - | chr8.3:4344135-4344154 | MS.gene57642:intron | 25.0% |
| ! | TGAAACTTAAATGATCACTT+TGG | - | chr8.3:4344164-4344183 | MS.gene57642:intron | 25.0% |
| ! | TTAACAATACTAGTAGATTG+TGG | + | chr8.3:4343587-4343606 | None:intergenic | 25.0% |
| ! | TTAAGGTTATCGCTAAAATT+GGG | + | chr8.3:4342395-4342414 | None:intergenic | 25.0% |
| !! | ACAATTTGGAGTTATAACAA+GGG | - | chr8.3:4343123-4343142 | MS.gene57642:intron | 25.0% |
| !! | ACATTAGTAATGGTGAATTT+TGG | - | chr8.3:4344468-4344487 | MS.gene57642:intron | 25.0% |
| !! | CCAACTATGCTATTTATAAT+AGG | + | chr8.3:4343925-4343944 | None:intergenic | 25.0% |
| !! | CTTCCTTTTTCTTTTTCTTT+TGG | - | chr8.3:4342789-4342808 | MS.gene57642:intron | 25.0% |
| !! | GAAGATTGGAAAAAACATTT+TGG | - | chr8.3:4345710-4345729 | MS.gene57642:CDS | 25.0% |
| !! | TAATTTTTCCTCTTTTGTCT+GGG | - | chr8.3:4341952-4341971 | MS.gene57642:CDS | 25.0% |
| !! | TCCTTTTTCTTTTTCTTTTG+GGG | - | chr8.3:4342791-4342810 | MS.gene57642:intron | 25.0% |
| !! | TTAATTTTTCCTCTTTTGTC+TGG | - | chr8.3:4341951-4341970 | MS.gene57642:CDS | 25.0% |
| !! | TTTAAGGTTATCGCTAAAAT+TGG | + | chr8.3:4342396-4342415 | None:intergenic | 25.0% |
| !!! | AAAAACATTTTGGCACTAAA+TGG | - | chr8.3:4345720-4345739 | MS.gene57642:CDS | 25.0% |
| !!! | AAGCAATTTTGATGGTTTTA+GGG | + | chr8.3:4341051-4341070 | None:intergenic | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | + | chr8.3:4343311-4343330 | None:intergenic | 25.0% |
| !!! | CTTACTTTGTTTTATTCATG+GGG | + | chr8.3:4345375-4345394 | None:intergenic | 25.0% |
| !!! | CTTGTATTCTTTTTTTTTGG+TGG | - | chr8.3:4344270-4344289 | MS.gene57642:intron | 25.0% |
| !!! | GCTTACTTTGTTTTATTCAT+GGG | + | chr8.3:4345376-4345395 | None:intergenic | 25.0% |
| !!! | TTAGATTTTTCAATACTGTG+AGG | + | chr8.3:4341761-4341780 | None:intergenic | 25.0% |
| !!! | TTGAGACTTTTGAAACTTAA+AGG | - | chr8.3:4344125-4344144 | MS.gene57642:intron | 25.0% |
| !!! | TTTTAATTCAGGTGTATTCA+AGG | - | chr8.3:4345303-4345322 | MS.gene57642:CDS | 25.0% |
| AAAATTGCTTCTAGTGACTA+TGG | - | chr8.3:4341061-4341080 | MS.gene57642:CDS | 30.0% | |
| AACAAGGCTCCATAAATAAT+TGG | - | chr8.3:4344621-4344640 | MS.gene57642:intron | 30.0% | |
| AACTCCTCTCTATGATATAA+TGG | - | chr8.3:4342023-4342042 | MS.gene57642:CDS | 30.0% | |
| ACATGAAATTTAAATCCAGG+TGG | - | chr8.3:4345510-4345529 | MS.gene57642:CDS | 30.0% | |
| ACCCCAAAAGAAAAAGAAAA+AGG | + | chr8.3:4342795-4342814 | None:intergenic | 30.0% | |
| AGAGGATCTCCAATTATTTA+TGG | + | chr8.3:4344633-4344652 | None:intergenic | 30.0% | |
| AGCTTCAGAAAACAAAGAAA+AGG | - | chr8.3:4341262-4341281 | MS.gene57642:intron | 30.0% | |
| ATAAGTTAACTCTCGGTTTA+AGG | + | chr8.3:4342412-4342431 | None:intergenic | 30.0% | |
| ATAGTATGAATCGTTGAATG+TGG | - | chr8.3:4343751-4343770 | MS.gene57642:intron | 30.0% | |
| ATATGGTCAAATGCATCTAA+AGG | + | chr8.3:4344212-4344231 | None:intergenic | 30.0% | |
| ATGCATACATCAAGAACTAA+CGG | + | chr8.3:4342948-4342967 | None:intergenic | 30.0% | |
| ATGGATGAAAAACTGCTATT+GGG | + | chr8.3:4341105-4341124 | None:intergenic | 30.0% | |
| ATTAAAAGAAACATCACCAG+TGG | - | chr8.3:4345334-4345353 | MS.gene57642:CDS | 30.0% | |
| ATTATATCATAGAGAGGAGT+TGG | + | chr8.3:4342024-4342043 | None:intergenic | 30.0% | |
| ATTGGTTACTATGTTGATGT+TGG | - | chr8.3:4341316-4341335 | MS.gene57642:intron | 30.0% | |
| CAAAGTATATGGCATTTCAA+AGG | + | chr8.3:4345398-4345417 | None:intergenic | 30.0% | |
| CAACATAGTAACCAATCAAA+GGG | + | chr8.3:4341312-4341331 | None:intergenic | 30.0% | |
| CATAATATATGCATGGTTCA+GGG | + | chr8.3:4344311-4344330 | None:intergenic | 30.0% | |
| CATATGTGAAATGATTGACT+TGG | - | chr8.3:4343514-4343533 | MS.gene57642:intron | 30.0% | |
| CATGAAATTTAAATCCAGGT+GGG | - | chr8.3:4345511-4345530 | MS.gene57642:CDS | 30.0% | |
| CTTCAGAAAACAAAGAAAAG+GGG | - | chr8.3:4341264-4341283 | MS.gene57642:intron | 30.0% | |
| GAAAAAGAAAAAGGAAGACT+TGG | + | chr8.3:4342786-4342805 | None:intergenic | 30.0% | |
| GCTTCAGAAAACAAAGAAAA+GGG | - | chr8.3:4341263-4341282 | MS.gene57642:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | - | chr8.3:4344185-4344204 | MS.gene57642:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | + | chr8.3:4344204-4344185 | None:intergenic | 30.0% | |
| GGTATGAATAAATTAAGCCA+TGG | + | chr8.3:4345265-4345284 | None:intergenic | 30.0% | |
| GTTAATCTCAATCAATGGAA+GGG | - | chr8.3:4344565-4344584 | MS.gene57642:intron | 30.0% | |
| TAAGGTTATCGCTAAAATTG+GGG | + | chr8.3:4342394-4342413 | None:intergenic | 30.0% | |
| TAGTCAAGATTAAACGTCTA+GGG | + | chr8.3:4344979-4344998 | None:intergenic | 30.0% | |
| TCAACATAGTAACCAATCAA+AGG | + | chr8.3:4341313-4341332 | None:intergenic | 30.0% | |
| TCATAATATATGCATGGTTC+AGG | + | chr8.3:4344312-4344331 | None:intergenic | 30.0% | |
| TCATGATGACTCAAAGTATA+TGG | + | chr8.3:4345409-4345428 | None:intergenic | 30.0% | |
| TCTTAAAAAGAAAGGGACTA+CGG | - | chr8.3:4342587-4342606 | MS.gene57642:intron | 30.0% | |
| TGGACTTCATTATGAGAAAA+AGG | - | chr8.3:4345159-4345178 | MS.gene57642:intron | 30.0% | |
| TGTGAACTCATTCTAACTTA+TGG | + | chr8.3:4342759-4342778 | None:intergenic | 30.0% | |
| TTATATCATAGAGAGGAGTT+GGG | + | chr8.3:4342023-4342042 | None:intergenic | 30.0% | |
| TTGTGAATATAAGCCTTTCA+CGG | + | chr8.3:4343664-4343683 | None:intergenic | 30.0% | |
| TTTGTCAAGAATAGAAGACT+TGG | + | chr8.3:4342826-4342845 | None:intergenic | 30.0% | |
| ! | ACTACGGTAATCTAAAATTG+AGG | - | chr8.3:4342603-4342622 | MS.gene57642:intron | 30.0% |
| ! | ACTCAAGTGGATTTGATAAT+TGG | - | chr8.3:4345594-4345613 | MS.gene57642:CDS | 30.0% |
| ! | CTTTAGTAGAGTACTACTTA+TGG | - | chr8.3:4341600-4341619 | MS.gene57642:intron | 30.0% |
| ! | GAAATTGACATTTTGCTTCA+AGG | - | chr8.3:4345121-4345140 | MS.gene57642:intron | 30.0% |
| ! | GACAATTTGGAGTTATAACA+AGG | - | chr8.3:4343122-4343141 | MS.gene57642:intron | 30.0% |
| ! | TTAAAGAAGCTATTCTAGGA+TGG | + | chr8.3:4344676-4344695 | None:intergenic | 30.0% |
| ! | TTTCAAACAAGTCCTTTTAG+AGG | + | chr8.3:4344080-4344099 | None:intergenic | 30.0% |
| ! | TTTTCTCATAATGAAGTCCA+GGG | + | chr8.3:4345159-4345178 | None:intergenic | 30.0% |
| ! | TTTTTCTCATAATGAAGTCC+AGG | + | chr8.3:4345160-4345179 | None:intergenic | 30.0% |
| !! | ACTAATTTTAAGTGGGTGTT+AGG | + | chr8.3:4343989-4344008 | None:intergenic | 30.0% |
| !! | ATTAGTCATCTTTTTAGGCA+TGG | - | chr8.3:4344003-4344022 | MS.gene57642:intron | 30.0% |
| !! | CTTGGACATGTATTTTGAAA+CGG | - | chr8.3:4343532-4343551 | MS.gene57642:intron | 30.0% |
| !! | GAAGCAATTTTGATGGTTTT+AGG | + | chr8.3:4341052-4341071 | None:intergenic | 30.0% |
| !! | TAGTAATGGTGAATTTTGGT+TGG | - | chr8.3:4344472-4344491 | MS.gene57642:intron | 30.0% |
| !!! | AGCAATAACTTTTTGCTGTT+AGG | - | chr8.3:4344912-4344931 | MS.gene57642:intron | 30.0% |
| !!! | GGCTTACTTTGTTTTATTCA+TGG | + | chr8.3:4345377-4345396 | None:intergenic | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | + | chr8.3:4344173-4344154 | None:intergenic | 30.0% |
| !!! | TTGTTGAAGATTTTTTGTCC+AGG | + | chr8.3:4345797-4345816 | None:intergenic | 30.0% |
| AATAAATTAAGCCATGGGTG+AGG | + | chr8.3:4345259-4345278 | None:intergenic | 35.0% | |
| AATCACCAACGTTCATGAAT+TGG | - | chr8.3:4341486-4341505 | MS.gene57642:CDS | 35.0% | |
| ACAGTGCACATTGCAAAAAT+TGG | + | chr8.3:4343329-4343348 | None:intergenic | 35.0% | |
| AGATAATCAGTCCAAGAAAC+AGG | + | chr8.3:4341397-4341416 | None:intergenic | 35.0% | |
| AGATTGAGGGAAGAAATTAG+AGG | + | chr8.3:4344651-4344670 | None:intergenic | 35.0% | |
| ATAATGAAGTCCAGGGATAT+AGG | + | chr8.3:4345152-4345171 | None:intergenic | 35.0% | |
| ATACTAGTAGATTGTGGACA+AGG | + | chr8.3:4343581-4343600 | None:intergenic | 35.0% | |
| ATATACTCTACTCCGCAAAA+AGG | - | chr8.3:4342054-4342073 | MS.gene57642:CDS | 35.0% | |
| CACTAAATGGAAGAGTTTCT+TGG | - | chr8.3:4345733-4345752 | MS.gene57642:CDS | 35.0% | |
| CATCATCATCATCCTCTAAA+AGG | - | chr8.3:4344065-4344084 | MS.gene57642:intron | 35.0% | |
| CTAGTCAAGATTAAACGTCT+AGG | + | chr8.3:4344980-4344999 | None:intergenic | 35.0% | |
| CTTGACAAACATGTGTATGT+TGG | - | chr8.3:4342837-4342856 | MS.gene57642:intron | 35.0% | |
| GAAACTTAAAGGACCACTTT+GGG | + | chr8.3:4343854-4343873 | None:intergenic | 35.0% | |
| GAACGGTTAATCTCAATCAA+TGG | - | chr8.3:4344560-4344579 | MS.gene57642:intron | 35.0% | |
| GAATTCAGAGTTATATCACG+CGG | - | chr8.3:4343084-4343103 | MS.gene57642:intron | 35.0% | |
| GACTGATTATCTTTACCTGA+CGG | - | chr8.3:4341405-4341424 | MS.gene57642:CDS | 35.0% | |
| GATGGATGAAAAACTGCTAT+TGG | + | chr8.3:4341106-4341125 | None:intergenic | 35.0% | |
| GGTATGTTTGATTCAGGAAA+AGG | - | chr8.3:4343034-4343053 | MS.gene57642:intron | 35.0% | |
| GGTTAATCTCAATCAATGGA+AGG | - | chr8.3:4344564-4344583 | MS.gene57642:intron | 35.0% | |
| TAACGGTCAAAATTGTGCAT+TGG | - | chr8.3:4343491-4343510 | MS.gene57642:intron | 35.0% | |
| TACAATTCCATCATGAGTCA+TGG | + | chr8.3:4341230-4341249 | None:intergenic | 35.0% | |
| TACCAAGTGAGTTAAGATCA+CGG | - | chr8.3:4344340-4344359 | MS.gene57642:intron | 35.0% | |
| TCTCTCTTAAGGTGTATTGT+TGG | + | chr8.3:4342186-4342205 | None:intergenic | 35.0% | |
| TGAAACTTAAAGGACCACTT+TGG | + | chr8.3:4343855-4343874 | None:intergenic | 35.0% | |
| TGATCATCAATCCGAGAAAA+TGG | - | chr8.3:4344742-4344761 | MS.gene57642:intron | 35.0% | |
| TGATCTTAACTCACTTGGTA+AGG | + | chr8.3:4344340-4344359 | None:intergenic | 35.0% | |
| TGATGGAATTGTAGTTGACA+TGG | - | chr8.3:4341237-4341256 | MS.gene57642:intron | 35.0% | |
| TTGTATGCAACTCTTGAACA+TGG | - | chr8.3:4341364-4341383 | MS.gene57642:CDS | 35.0% | |
| ! | AGGGAATTGAACTTTTTGGA+AGG | - | chr8.3:4344584-4344603 | MS.gene57642:intron | 35.0% |
| ! | CTTTTACCAAAGATCAGGAA+CGG | - | chr8.3:4344543-4344562 | MS.gene57642:intron | 35.0% |
| ! | GGTTGATATGGTGTTAACAT+TGG | + | chr8.3:4341014-4341033 | None:intergenic | 35.0% |
| ! | GTCACTAGAAGCAATTTTGA+TGG | + | chr8.3:4341059-4341078 | None:intergenic | 35.0% |
| ! | GTTATGGAGTTTGGTTGATA+TGG | + | chr8.3:4341026-4341045 | None:intergenic | 35.0% |
| ! | TGGAAGGGAATTGAACTTTT+TGG | - | chr8.3:4344580-4344599 | MS.gene57642:intron | 35.0% |
| !! | ATCTTTTTAGGCATGGCAAA+TGG | - | chr8.3:4344010-4344029 | MS.gene57642:intron | 35.0% |
| !! | CTCTCTTTAAGGTGTATTGT+TGG | + | chr8.3:4342289-4342308 | None:intergenic | 35.0% |
| !! | GGGAATTGAACTTTTTGGAA+GGG | - | chr8.3:4344585-4344604 | MS.gene57642:intron | 35.0% |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | - | chr8.3:4343838-4343857 | MS.gene57642:intron | 35.0% |
| !! | TAGATTTGGTGTACGTTTGT+TGG | + | chr8.3:4343237-4343256 | None:intergenic | 35.0% |
| !! | TTCTGCTTTTACCAAAGATC+AGG | - | chr8.3:4344538-4344557 | MS.gene57642:intron | 35.0% |
| !! | TTGAAGTTTTGTAGTGATGC+TGG | - | chr8.3:4345647-4345666 | MS.gene57642:CDS | 35.0% |
| !!! | ATTTTGGTTGGCATGTATAC+AGG | - | chr8.3:4344484-4344503 | MS.gene57642:intron | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr8.3:4343555-4343536 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTGGTGGTGTCCA+AGG | - | chr8.3:4344279-4344298 | MS.gene57642:intron | 35.0% |
| ACCAAGTGAGTTAAGATCAC+GGG | - | chr8.3:4344341-4344360 | MS.gene57642:intron | 40.0% | |
| AGTGGTCAGACGTTTCTTTA+CGG | - | chr8.3:4341457-4341476 | MS.gene57642:CDS | 40.0% | |
| AGTTGTGGTCATCTATCGAA+TGG | - | chr8.3:4343012-4343031 | MS.gene57642:intron | 40.0% | |
| ATGTTGGAGGAGAACAACTA+TGG | - | chr8.3:4341332-4341351 | MS.gene57642:CDS | 40.0% | |
| ATTACTACTAAGAAGCGGCA+TGG | - | chr8.3:4342913-4342932 | MS.gene57642:intron | 40.0% | |
| CACATCCAATTCATGAACGT+TGG | + | chr8.3:4341494-4341513 | None:intergenic | 40.0% | |
| CATGAATTGGATGTGATCAC+TGG | - | chr8.3:4341499-4341518 | MS.gene57642:CDS | 40.0% | |
| CCAGGTGATAAAATCATCCT+GGG | + | chr8.3:4345779-4345798 | None:intergenic | 40.0% | |
| CGAATGGGTATGTTTGATTC+AGG | - | chr8.3:4343028-4343047 | MS.gene57642:intron | 40.0% | |
| CTTTCCAATGCTGGAATTAG+TGG | - | chr8.3:4341439-4341458 | MS.gene57642:CDS | 40.0% | |
| GATCGACAACTAGGTAGATT+TGG | + | chr8.3:4343251-4343270 | None:intergenic | 40.0% | |
| GATTAACCGTTCCTGATCTT+TGG | + | chr8.3:4344552-4344571 | None:intergenic | 40.0% | |
| GATTATCTTTACCTGACGGT+TGG | - | chr8.3:4341409-4341428 | MS.gene57642:CDS | 40.0% | |
| GCAGTAGATAATGCTGTGTT+TGG | + | chr8.3:4344702-4344721 | None:intergenic | 40.0% | |
| GGTTACTATGTTGATGTTGG+AGG | - | chr8.3:4341319-4341338 | MS.gene57642:intron | 40.0% | |
| GTCATCTTTGGTACCAAATC+TGG | - | chr8.3:4343961-4343980 | MS.gene57642:intron | 40.0% | |
| GTCTTTGAACACCCTTTGAT+TGG | - | chr8.3:4341298-4341317 | MS.gene57642:intron | 40.0% | |
| GTTGGATTCTTACACTCAAG+TGG | - | chr8.3:4345581-4345600 | MS.gene57642:CDS | 40.0% | |
| GTTGTGGTCATCTATCGAAT+GGG | - | chr8.3:4343013-4343032 | MS.gene57642:intron | 40.0% | |
| TCATCAATCCGAGAAAATGG+TGG | - | chr8.3:4344745-4344764 | MS.gene57642:intron | 40.0% | |
| TCCAGGTGATAAAATCATCC+TGG | + | chr8.3:4345780-4345799 | None:intergenic | 40.0% | |
| TGCTTCCTTGAAGTCATCTT+TGG | - | chr8.3:4343949-4343968 | MS.gene57642:intron | 40.0% | |
| TGGCATGTATACAGGTTAAG+TGG | - | chr8.3:4344492-4344511 | MS.gene57642:intron | 40.0% | |
| TGGTACCAAAGATGACTTCA+AGG | + | chr8.3:4343957-4343976 | None:intergenic | 40.0% | |
| TTCCATTAGTCATCCGTGAA+AGG | - | chr8.3:4343648-4343667 | MS.gene57642:intron | 40.0% | |
| TTCCTACGGTGGATATCAAA+CGG | + | chr8.3:4340952-4340971 | None:intergenic | 40.0% | |
| TTCTTGAATAGAGTCCGAAG+TGG | - | chr8.3:4345196-4345215 | MS.gene57642:CDS | 40.0% | |
| ! | CTTGGAGGTTTAGGACAATT+TGG | - | chr8.3:4343109-4343128 | MS.gene57642:intron | 40.0% |
| ! | TACCTTGTCCACCATTTTCT+CGG | + | chr8.3:4344756-4344775 | None:intergenic | 40.0% |
| ! | TTTAGGGTCGTTATGGAGTT+TGG | + | chr8.3:4341035-4341054 | None:intergenic | 40.0% |
| !! | ATTCTAGGATGGTCAGATTG+AGG | + | chr8.3:4344665-4344684 | None:intergenic | 40.0% |
| !! | TAGCAGAGTTTTGCACTGAT+CGG | + | chr8.3:4340978-4340997 | None:intergenic | 40.0% |
| !! | TCATGAACGTTGGTGATTTG+AGG | + | chr8.3:4341484-4341503 | None:intergenic | 40.0% |
| !! | TTCTAGGATGGTCAGATTGA+GGG | + | chr8.3:4344664-4344683 | None:intergenic | 40.0% |
| !! | TTTTTAGGCATGGCAAATGG+TGG | - | chr8.3:4344013-4344032 | MS.gene57642:intron | 40.0% |
| !!! | CTTTTTCTTTTGGGGTACTG+CGG | - | chr8.3:4342799-4342818 | MS.gene57642:intron | 40.0% |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr8.3:4343554-4343535 | None:intergenic | 40.0% |
| !!! | TGATGGTTTTAGGGTCGTTA+TGG | + | chr8.3:4341042-4341061 | None:intergenic | 40.0% |
| ACAAGCACAAGTTTGATCCC+AGG | - | chr8.3:4345759-4345778 | MS.gene57642:CDS | 45.0% | |
| ACCACAGCACACAAGAAGAT+TGG | - | chr8.3:4345696-4345715 | MS.gene57642:CDS | 45.0% | |
| AGCCTTTCACGGATGACTAA+TGG | + | chr8.3:4343653-4343672 | None:intergenic | 45.0% | |
| AGCTTCAGTCACAAGGATTG+TGG | - | chr8.3:4345227-4345246 | MS.gene57642:CDS | 45.0% | |
| ATGGTTCAGGGTTCAAACCT+TGG | + | chr8.3:4344299-4344318 | None:intergenic | 45.0% | |
| CAAGTGAGTTAAGATCACGG+GGG | - | chr8.3:4344343-4344362 | MS.gene57642:intron | 45.0% | |
| CAGTATAACCGTACCGTTGT+GGG | + | chr8.3:4343172-4343191 | None:intergenic | 45.0% | |
| CCAAGTGAGTTAAGATCACG+GGG | - | chr8.3:4344342-4344361 | MS.gene57642:intron | 45.0% | |
| CTGACCACTAATTCCAGCAT+TGG | + | chr8.3:4341446-4341465 | None:intergenic | 45.0% | |
| GAAGCTTCAACTCTCCACTT+CGG | + | chr8.3:4345213-4345232 | None:intergenic | 45.0% | |
| GAGGATGTCTTCTACACAGT+TGG | - | chr8.3:4345563-4345582 | MS.gene57642:CDS | 45.0% | |
| GAGTTATATCACGCGGTTCT+TGG | - | chr8.3:4343091-4343110 | MS.gene57642:intron | 45.0% | |
| GAGTTGAAGCTTCAGTCACA+AGG | - | chr8.3:4345220-4345239 | MS.gene57642:CDS | 45.0% | |
| GCTTCAGTCACAAGGATTGT+GGG | - | chr8.3:4345228-4345247 | MS.gene57642:CDS | 45.0% | |
| GGTTCAAACCCAGACAAAAG+AGG | + | chr8.3:4341963-4341982 | None:intergenic | 45.0% | |
| GTAAACCAAGACAGTTCCAC+TGG | + | chr8.3:4345353-4345372 | None:intergenic | 45.0% | |
| GTCAGCAATGATACCAAACG+AGG | - | chr8.3:4345544-4345563 | MS.gene57642:CDS | 45.0% | |
| GTGTAGAAGACATCCTCGTT+TGG | + | chr8.3:4345560-4345579 | None:intergenic | 45.0% | |
| TATCTTTACCTGACGGTTGG+AGG | - | chr8.3:4341412-4341431 | MS.gene57642:CDS | 45.0% | |
| TCAGTATAACCGTACCGTTG+TGG | + | chr8.3:4343173-4343192 | None:intergenic | 45.0% | |
| TCCAATCTTCTTGTGTGCTG+TGG | + | chr8.3:4345700-4345719 | None:intergenic | 45.0% | |
| TCCTACGGTGGATATCAAAC+GGG | + | chr8.3:4340951-4340970 | None:intergenic | 45.0% | |
| TCTTCTTGTGTGCTGTGGTT+AGG | + | chr8.3:4345695-4345714 | None:intergenic | 45.0% | |
| TTAAATCCAGGTGGGACGAT+AGG | - | chr8.3:4345519-4345538 | MS.gene57642:CDS | 45.0% | |
| TTATATCACGCGGTTCTTGG+AGG | - | chr8.3:4343094-4343113 | MS.gene57642:intron | 45.0% | |
| ! | AGTCATGGCTTGTCCATTAG+TGG | + | chr8.3:4341215-4341234 | None:intergenic | 45.0% |
| ! | ATGGACTTGCACCTGTTTCT+TGG | - | chr8.3:4341383-4341402 | MS.gene57642:CDS | 45.0% |
| ! | CCCAGGATGATTTTATCACC+TGG | - | chr8.3:4345776-4345795 | MS.gene57642:CDS | 45.0% |
| ! | GTGTTAACATTGGCTAGCTC+TGG | + | chr8.3:4341004-4341023 | None:intergenic | 45.0% |
| !! | ATCCGAGAAAATGGTGGACA+AGG | - | chr8.3:4344751-4344770 | MS.gene57642:intron | 45.0% |
| !! | GCACTGATCGGTTTTTCCTA+CGG | + | chr8.3:4340966-4340985 | None:intergenic | 45.0% |
| !! | TTAACATTGGCTAGCTCTGG+TGG | + | chr8.3:4341001-4341020 | None:intergenic | 45.0% |
| !! | TATATAATTAAAGATATTAA+CGG | - | chr8.3:4343474-4343493 | MS.gene57642:intron | 5.0% |
| !!! | TTAATTTGAATTAAAAAAAA+AGG | + | chr8.3:4341875-4341894 | None:intergenic | 5.0% |
| ACCCGTTTGATATCCACCGT+AGG | - | chr8.3:4340947-4340966 | MS.gene57642:CDS | 50.0% | |
| ACTATAGCAGCCAGAGGACA+AGG | - | chr8.3:4341184-4341203 | MS.gene57642:intron | 50.0% | |
| CATCACCAGTGGAACTGTCT+TGG | - | chr8.3:4345345-4345364 | MS.gene57642:CDS | 50.0% | |
| CCCCGTGATCTTAACTCACT+TGG | + | chr8.3:4344345-4344364 | None:intergenic | 50.0% | |
| CCTCTGGCTGCTATAGTGAA+AGG | + | chr8.3:4341181-4341200 | None:intergenic | 50.0% | |
| CCTTTCACTATAGCAGCCAG+AGG | - | chr8.3:4341178-4341197 | MS.gene57642:intron | 50.0% | |
| GGACAAGCCATGACTCATGA+TGG | - | chr8.3:4341220-4341239 | MS.gene57642:intron | 50.0% | |
| GGACAAGGTCACTCCACTAA+TGG | - | chr8.3:4341199-4341218 | MS.gene57642:intron | 50.0% | |
| GGAGGAACACTTTCCAATGC+TGG | - | chr8.3:4341430-4341449 | MS.gene57642:CDS | 50.0% | |
| GGGATGCTGCTAATGCAACA+AGG | - | chr8.3:4344605-4344624 | MS.gene57642:intron | 50.0% | |
| TGGGTGTTAGGAGCCAGATT+TGG | + | chr8.3:4343977-4343996 | None:intergenic | 50.0% | |
| ! | AAAGTGTTCCTCCAACCGTC+AGG | + | chr8.3:4341423-4341442 | None:intergenic | 50.0% |
| !! | CAAGGACTAGCCTATATCCC+TGG | - | chr8.3:4345139-4345158 | MS.gene57642:intron | 50.0% |
| !! | CTGATCGGTTTTTCCTACGG+TGG | + | chr8.3:4340963-4340982 | None:intergenic | 50.0% |
| !! | GTGGACAAGGTACCGTCTAT+TGG | - | chr8.3:4344764-4344783 | MS.gene57642:intron | 50.0% |
| AGTGGAGTGACCTTGTCCTC+TGG | + | chr8.3:4341197-4341216 | None:intergenic | 55.0% | |
| CACGCGGTTCTTGGAGGTTT+AGG | - | chr8.3:4343100-4343119 | MS.gene57642:intron | 55.0% | |
| TCTTCAGCCAGCTCCCACAA+CGG | - | chr8.3:4343156-4343175 | MS.gene57642:intron | 55.0% | |
| TGACATCCTATCGTCCCACC+TGG | + | chr8.3:4345528-4345547 | None:intergenic | 55.0% | |
| TGTGGGAAGTTCCTCACCCA+TGG | - | chr8.3:4345245-4345264 | MS.gene57642:CDS | 55.0% | |
| AACCGTACCGTTGTGGGAGC+TGG | + | chr8.3:4343166-4343185 | None:intergenic | 60.0% | |
| AGCCAGCTCCCACAACGGTA+CGG | - | chr8.3:4343161-4343180 | MS.gene57642:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 4340896 | 4345820 | 4340896 | ID=MS.gene57642 |
| chr8.3 | mRNA | 4340896 | 4345820 | 4340896 | ID=MS.gene57642.t1;Parent=MS.gene57642 |
| chr8.3 | exon | 4345196 | 4345820 | 4345196 | ID=MS.gene57642.t1.exon1;Parent=MS.gene57642.t1 |
| chr8.3 | CDS | 4345196 | 4345820 | 4345196 | ID=cds.MS.gene57642.t1;Parent=MS.gene57642.t1 |
| chr8.3 | exon | 4343539 | 4343666 | 4343539 | ID=MS.gene57642.t1.exon2;Parent=MS.gene57642.t1 |
| chr8.3 | CDS | 4343539 | 4343666 | 4343539 | ID=cds.MS.gene57642.t1;Parent=MS.gene57642.t1 |
| chr8.3 | exon | 4341944 | 4342210 | 4341944 | ID=MS.gene57642.t1.exon3;Parent=MS.gene57642.t1 |
| chr8.3 | CDS | 4341944 | 4342210 | 4341944 | ID=cds.MS.gene57642.t1;Parent=MS.gene57642.t1 |
| chr8.3 | exon | 4341327 | 4341595 | 4341327 | ID=MS.gene57642.t1.exon4;Parent=MS.gene57642.t1 |
| chr8.3 | CDS | 4341327 | 4341595 | 4341327 | ID=cds.MS.gene57642.t1;Parent=MS.gene57642.t1 |
| chr8.3 | exon | 4340896 | 4341187 | 4340896 | ID=MS.gene57642.t1.exon5;Parent=MS.gene57642.t1 |
| chr8.3 | CDS | 4340896 | 4341187 | 4340896 | ID=cds.MS.gene57642.t1;Parent=MS.gene57642.t1 |
| Gene Sequence |
| Protein sequence |
