Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57730.t1 | XP_013458166.1 | 100 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 9.10E-84 | 319.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57730.t1 | Q65WT0 | 88.3 | 145 | 17 | 0 | 1 | 145 | 1 | 145 | 5.8e-79 | 294.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57730.t1 | A0A072UR78 | 100.0 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 6.6e-84 | 319.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067412 | MS.gene57730 | PPI |
| MS.gene57730 | MS.gene83541 | PPI |
| MS.gene57730 | MS.gene86409 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57730.t1 | MTR_4g117260 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.44e-106 | 300 |
| MS.gene57730.t1 | MTR_8g083120 | 96.552 | 145 | 5 | 0 | 1 | 145 | 1 | 145 | 2.37e-104 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57730.t1 | AT4G21110 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 5.83e-95 | 270 |
| MS.gene57730.t1 | AT4G21110 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 5.83e-95 | 270 |
Find 40 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAATTTCCTTTCTCTTA+TGG | 0.231250 | 8.3:-8966425 | None:intergenic |
| TCAATTAATTCCCAGCCTTC+TGG | 0.234580 | 8.3:-8966167 | None:intergenic |
| ACTCGGCTTGTCTTTACTTT+TGG | 0.267712 | 8.3:-8966137 | None:intergenic |
| TTCTCCTCCCTGAGCTCCTT+GGG | 0.301872 | 8.3:-8967863 | None:intergenic |
| CAAATACATAGCGGCTCTTC+TGG | 0.318337 | 8.3:-8966395 | None:intergenic |
| CTTCTCCTCCCTGAGCTCCT+TGG | 0.345032 | 8.3:-8967864 | None:intergenic |
| AAAGAAAATGTGAGACTTTG+TGG | 0.382714 | 8.3:+8966352 | MS.gene57730:CDS |
| ACCGCAACCTAATTGCAAAA+TGG | 0.383315 | 8.3:+8966487 | MS.gene57730:CDS |
| GCAGAGTGCCCAAGGAGCTC+AGG | 0.388903 | 8.3:+8967855 | MS.gene57730:CDS |
| CAATTAATTCCCAGCCTTCT+GGG | 0.404207 | 8.3:-8966166 | None:intergenic |
| TATGAATTCTGTTTAGATCA+AGG | 0.408300 | 8.3:+8966456 | MS.gene57730:CDS |
| CCTACACTTCGTGAACTTCA+AGG | 0.446024 | 8.3:+8966191 | MS.gene57730:CDS |
| AGCCTTCTGGGTATTTAACT+CGG | 0.490950 | 8.3:-8966154 | None:intergenic |
| GAGTTAAATACCCAGAAGGC+TGG | 0.492946 | 8.3:+8966156 | MS.gene57730:CDS |
| CAAGGAGCTCAGGGAGGAGA+AGG | 0.494422 | 8.3:+8967865 | MS.gene57730:CDS |
| GTGTGTTCATTGTGGTTGCA+AGG | 0.509966 | 8.3:+8967895 | MS.gene57730:CDS |
| GTTGCAAGGGTTGTGCAAGT+GGG | 0.512248 | 8.3:+8967909 | MS.gene57730:CDS |
| GGTTGCAAGGGTTGTGCAAG+TGG | 0.514571 | 8.3:+8967908 | MS.gene57730:CDS |
| CAACATAGGCGTTCATAACC+AGG | 0.518122 | 8.3:-8967782 | None:intergenic |
| CCTAATTGCAAAATGGAAGA+AGG | 0.526082 | 8.3:+8966494 | MS.gene57730:CDS |
| GTATGCACCTCAAGCAACAT+AGG | 0.540597 | 8.3:-8967796 | None:intergenic |
| CCTTGAAGTTCACGAAGTGT+AGG | 0.544038 | 8.3:-8966191 | None:intergenic |
| CAGAGTGCCCAAGGAGCTCA+GGG | 0.552081 | 8.3:+8967856 | MS.gene57730:CDS |
| TGTGTTCATTGTGGTTGCAA+GGG | 0.552779 | 8.3:+8967896 | MS.gene57730:CDS |
| TTGCAAGGGTTGTGCAAGTG+GGG | 0.556074 | 8.3:+8967910 | MS.gene57730:CDS |
| TGAACTCTACCATAAGAGAA+AGG | 0.559158 | 8.3:+8966416 | MS.gene57730:CDS |
| AGTTAAATACCCAGAAGGCT+GGG | 0.561161 | 8.3:+8966157 | MS.gene57730:CDS |
| CTTCAAGGAAAGATGAGGGA+AGG | 0.566524 | 8.3:+8966206 | MS.gene57730:CDS |
| TTGTGTATGCAGAGTGCCCA+AGG | 0.571684 | 8.3:+8967847 | MS.gene57730:CDS |
| GTTATAGAGTGTGTTCATTG+TGG | 0.573951 | 8.3:+8967887 | MS.gene57730:CDS |
| GTGAACTTCAAGGAAAGATG+AGG | 0.592845 | 8.3:+8966201 | MS.gene57730:CDS |
| CACTCTGCATACACAAGTGG+TGG | 0.609114 | 8.3:-8967840 | None:intergenic |
| GCTGAGAATGACCCACATGA+TGG | 0.619377 | 8.3:+8966327 | MS.gene57730:intron |
| TGAACTTCAAGGAAAGATGA+GGG | 0.638807 | 8.3:+8966202 | MS.gene57730:CDS |
| ATGAACGCCTATGTTGCTTG+AGG | 0.642564 | 8.3:+8967789 | MS.gene57730:CDS |
| GGGCACTCTGCATACACAAG+TGG | 0.642607 | 8.3:-8967843 | None:intergenic |
| AGCCGAGTTAAATACCCAGA+AGG | 0.645736 | 8.3:+8966152 | MS.gene57730:CDS |
| GTGGCGAAATTGTGATCGCG+TGG | 0.685360 | 8.3:-8967821 | None:intergenic |
| AGTGCCCAAGGAGCTCAGGG+AGG | 0.692740 | 8.3:+8967859 | MS.gene57730:CDS |
| GGTAGAGTTCAAATACATAG+CGG | 0.738599 | 8.3:-8966404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATATATTCCTATA+TGG | - | chr8.3:8967361-8967380 | None:intergenic | 10.0% |
| !! | AAAACCATTTAAAAACCAAA+AGG | - | chr8.3:8967052-8967071 | None:intergenic | 20.0% |
| !! | ATATTGTTATATCCTTTATG+TGG | + | chr8.3:8966302-8966321 | MS.gene57730:intron | 20.0% |
| !!! | AGACAATATTTTTTTCCTAT+AGG | + | chr8.3:8967543-8967562 | MS.gene57730:intron | 20.0% |
| !!! | TAACATTCTTGTCATTTATA+CGG | - | chr8.3:8966926-8966945 | None:intergenic | 20.0% |
| ! | AACAAGGTGATTAGAATTTA+AGG | - | chr8.3:8966767-8966786 | None:intergenic | 25.0% |
| ! | ACCGTTGAAAATGAAATATA+TGG | + | chr8.3:8967689-8967708 | MS.gene57730:intron | 25.0% |
| ! | ACTAAATCTACTCTTACAAT+TGG | + | chr8.3:8967482-8967501 | MS.gene57730:intron | 25.0% |
| ! | ATTAACTGAAGACAATGAAA+AGG | - | chr8.3:8967646-8967665 | None:intergenic | 25.0% |
| ! | CAAACAATTACTTTAGCAAA+GGG | - | chr8.3:8967395-8967414 | None:intergenic | 25.0% |
| ! | GAAAGTAAATTTCATTTGAC+GGG | + | chr8.3:8966570-8966589 | MS.gene57730:intron | 25.0% |
| ! | GAATGAAAAAGAATACAGTA+AGG | - | chr8.3:8966258-8966277 | None:intergenic | 25.0% |
| ! | GGAAAGTAAATTTCATTTGA+CGG | + | chr8.3:8966569-8966588 | MS.gene57730:intron | 25.0% |
| ! | GTATAAATGACAAGAATGTT+AGG | + | chr8.3:8966925-8966944 | MS.gene57730:intron | 25.0% |
| ! | TAGAAATTTCCTTTCTCTTA+TGG | - | chr8.3:8966428-8966447 | None:intergenic | 25.0% |
| ! | TATGAATTCTGTTTAGATCA+AGG | + | chr8.3:8966456-8966475 | MS.gene57730:CDS | 25.0% |
| ! | TATTCAATGAATGAACCAAA+TGG | + | chr8.3:8967266-8967285 | MS.gene57730:intron | 25.0% |
| ! | TCAAACAATTACTTTAGCAA+AGG | - | chr8.3:8967396-8967415 | None:intergenic | 25.0% |
| ! | TCATTCATTGAATATTCATC+TGG | - | chr8.3:8967260-8967279 | None:intergenic | 25.0% |
| ! | TTCAAGAGACATAATAAACT+CGG | + | chr8.3:8967131-8967150 | MS.gene57730:intron | 25.0% |
| ! | TTTAATAGTGAATGGTTGTT+TGG | + | chr8.3:8967315-8967334 | MS.gene57730:intron | 25.0% |
| !! | GCCATATATTTCATTTTCAA+CGG | - | chr8.3:8967693-8967712 | None:intergenic | 25.0% |
| !! | TCAACTTGTTTAATAGTGAA+TGG | + | chr8.3:8967307-8967326 | MS.gene57730:intron | 25.0% |
| !! | TGGTGTGCAATTTTAAATAT+AGG | - | chr8.3:8966378-8966397 | None:intergenic | 25.0% |
| !! | TTCACTATTAAACAAGTTGA+AGG | - | chr8.3:8967307-8967326 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTATAGGTTACA+AGG | + | chr8.3:8967551-8967570 | MS.gene57730:intron | 25.0% |
| AAAGAAAATGTGAGACTTTG+TGG | + | chr8.3:8966352-8966371 | MS.gene57730:CDS | 30.0% | |
| AATGATCAAGTCCTTTACTT+TGG | - | chr8.3:8967023-8967042 | None:intergenic | 30.0% | |
| AGAAGTGAGAAATCTATATC+TGG | + | chr8.3:8966616-8966635 | MS.gene57730:intron | 30.0% | |
| CAATTTATTCTTGCACTATG+AGG | - | chr8.3:8966882-8966901 | None:intergenic | 30.0% | |
| GAAGTGAGAAATCTATATCT+GGG | + | chr8.3:8966617-8966636 | MS.gene57730:intron | 30.0% | |
| GTAAAGTAACCTTAAGCATA+TGG | + | chr8.3:8966691-8966710 | MS.gene57730:intron | 30.0% | |
| ! | ATTTTCTTTTGCCATCATGT+GGG | - | chr8.3:8966341-8966360 | None:intergenic | 30.0% |
| ! | GAACAATTTATTTGAGACCT+TGG | - | chr8.3:8967114-8967133 | None:intergenic | 30.0% |
| ! | TATGGTTTGTAGCAAAAACA+AGG | - | chr8.3:8966783-8966802 | None:intergenic | 30.0% |
| ! | TTGATCATTTAGTGACCTTT+TGG | + | chr8.3:8967034-8967053 | MS.gene57730:intron | 30.0% |
| !! | TTTGGTGTATGTCTTAGTTT+TGG | + | chr8.3:8967333-8967352 | MS.gene57730:intron | 30.0% |
| !!! | GTGACCTTTTGGTTTTTAAA+TGG | + | chr8.3:8967045-8967064 | MS.gene57730:intron | 30.0% |
| AAGAATGTTAGGAGAAATGG+TGG | + | chr8.3:8966936-8966955 | MS.gene57730:intron | 35.0% | |
| ACAACAACCTTGTAACCTAT+AGG | - | chr8.3:8967561-8967580 | None:intergenic | 35.0% | |
| AGTGAACTACAATCAGCTTT+AGG | - | chr8.3:8967163-8967182 | None:intergenic | 35.0% | |
| CATCGTAGTTGCTATCTATA+AGG | + | chr8.3:8967438-8967457 | MS.gene57730:intron | 35.0% | |
| CCATAAAAAATTGCTCGAGA+AGG | + | chr8.3:8966798-8966817 | MS.gene57730:intron | 35.0% | |
| CCTAATTGCAAAATGGAAGA+AGG | + | chr8.3:8966494-8966513 | MS.gene57730:CDS | 35.0% | |
| GACAAGAATGTTAGGAGAAA+TGG | + | chr8.3:8966933-8966952 | MS.gene57730:intron | 35.0% | |
| GAGACATATCCATATGCTTA+AGG | - | chr8.3:8966703-8966722 | None:intergenic | 35.0% | |
| GAGATAGAATAAGTACGATC+AGG | + | chr8.3:8966592-8966611 | MS.gene57730:intron | 35.0% | |
| GAGTAAACTCTCCAAAGTAA+AGG | + | chr8.3:8967009-8967028 | MS.gene57730:intron | 35.0% | |
| GCAGTAAACAACAGTGATAT+TGG | - | chr8.3:8967624-8967643 | None:intergenic | 35.0% | |
| GGTAGAGTTCAAATACATAG+CGG | - | chr8.3:8966407-8966426 | None:intergenic | 35.0% | |
| GTTATAGAGTGTGTTCATTG+TGG | + | chr8.3:8967887-8967906 | MS.gene57730:CDS | 35.0% | |
| TAAAGCTGATTGTAGTTCAC+TGG | + | chr8.3:8967162-8967181 | MS.gene57730:intron | 35.0% | |
| TAAAGTTATGCCTGTGAGTA+AGG | + | chr8.3:8967086-8967105 | MS.gene57730:intron | 35.0% | |
| TGAACTCTACCATAAGAGAA+AGG | + | chr8.3:8966416-8966435 | MS.gene57730:CDS | 35.0% | |
| TGAACTTCAAGGAAAGATGA+GGG | + | chr8.3:8966202-8966221 | MS.gene57730:CDS | 35.0% | |
| ! | CATTTTCTTTTGCCATCATG+TGG | - | chr8.3:8966342-8966361 | None:intergenic | 35.0% |
| ! | CCTTCTTCCATTTTGCAATT+AGG | - | chr8.3:8966497-8966516 | None:intergenic | 35.0% |
| ! | GCTTAAGGTTACTTTACCTA+GGG | - | chr8.3:8966688-8966707 | None:intergenic | 35.0% |
| ! | TGCTTAAGGTTACTTTACCT+AGG | - | chr8.3:8966689-8966708 | None:intergenic | 35.0% |
| !! | TCCATTTTGCAATTAGGTTG+CGG | - | chr8.3:8966491-8966510 | None:intergenic | 35.0% |
| !!! | CCTTCTCGAGCAATTTTTTA+TGG | - | chr8.3:8966801-8966820 | None:intergenic | 35.0% |
| !!! | TCTTAGTTTTGGCTCCATAT+AGG | + | chr8.3:8967344-8967363 | MS.gene57730:intron | 35.0% |
| ACCGCAACCTAATTGCAAAA+TGG | + | chr8.3:8966487-8966506 | MS.gene57730:CDS | 40.0% | |
| AGCCTTCTGGGTATTTAACT+CGG | - | chr8.3:8966157-8966176 | None:intergenic | 40.0% | |
| AGTAGGACTGCAAATGATAC+GGG | + | chr8.3:8966738-8966757 | MS.gene57730:intron | 40.0% | |
| AGTTAAATACCCAGAAGGCT+GGG | + | chr8.3:8966157-8966176 | MS.gene57730:CDS | 40.0% | |
| CAATTAATTCCCAGCCTTCT+GGG | - | chr8.3:8966169-8966188 | None:intergenic | 40.0% | |
| CAGTAGGACTGCAAATGATA+CGG | + | chr8.3:8966737-8966756 | MS.gene57730:intron | 40.0% | |
| CCTAAAAAGGTCATTTCGCA+GGG | + | chr8.3:8966847-8966866 | MS.gene57730:intron | 40.0% | |
| GCTCTCTGATCATCCTAAAA+AGG | + | chr8.3:8966834-8966853 | MS.gene57730:intron | 40.0% | |
| GTGAACTTCAAGGAAAGATG+AGG | + | chr8.3:8966201-8966220 | MS.gene57730:CDS | 40.0% | |
| GTTACACTTTCCTACTCTTG+TGG | - | chr8.3:8966666-8966685 | None:intergenic | 40.0% | |
| TCAATTAATTCCCAGCCTTC+TGG | - | chr8.3:8966170-8966189 | None:intergenic | 40.0% | |
| TCCTAAAAAGGTCATTTCGC+AGG | + | chr8.3:8966846-8966865 | MS.gene57730:intron | 40.0% | |
| TGTGTTCATTGTGGTTGCAA+GGG | + | chr8.3:8967896-8967915 | MS.gene57730:CDS | 40.0% | |
| TTACCAAGATTCACGCCATT+TGG | - | chr8.3:8967284-8967303 | None:intergenic | 40.0% | |
| TTAGGAGAAATGGTGGTAGA+AGG | + | chr8.3:8966943-8966962 | MS.gene57730:intron | 40.0% | |
| ! | CTGATTGTAGTTCACTGGTT+TGG | + | chr8.3:8967167-8967186 | MS.gene57730:intron | 40.0% |
| !! | ACTCGGCTTGTCTTTACTTT+TGG | - | chr8.3:8966140-8966159 | None:intergenic | 40.0% |
| !! | TTTGTTTCTGAATTGCAGCC+TGG | + | chr8.3:8967764-8967783 | MS.gene57730:intron | 40.0% |
| ACACTTTCCTACTCTTGTGG+TGG | - | chr8.3:8966663-8966682 | None:intergenic | 45.0% | |
| AGCCGAGTTAAATACCCAGA+AGG | + | chr8.3:8966152-8966171 | MS.gene57730:CDS | 45.0% | |
| AGTCCTACTGTGTATGTGGT+AGG | - | chr8.3:8966727-8966746 | None:intergenic | 45.0% | |
| CAAATACATAGCGGCTCTTC+TGG | - | chr8.3:8966398-8966417 | None:intergenic | 45.0% | |
| CAACATAGGCGTTCATAACC+AGG | - | chr8.3:8967785-8967804 | None:intergenic | 45.0% | |
| CATTCTCAGCTGCCACATAA+AGG | - | chr8.3:8966317-8966336 | None:intergenic | 45.0% | |
| CCCACAGACAGAATTCTAAG+GGG | + | chr8.3:8967234-8967253 | MS.gene57730:intron | 45.0% | |
| CCCCTTAGAATTCTGTCTGT+GGG | - | chr8.3:8967237-8967256 | None:intergenic | 45.0% | |
| CCTACACTTCGTGAACTTCA+AGG | + | chr8.3:8966191-8966210 | MS.gene57730:CDS | 45.0% | |
| CCTACTCTTGTGGTGGTAAA+AGG | - | chr8.3:8966656-8966675 | None:intergenic | 45.0% | |
| CCTTGAAGTTCACGAAGTGT+AGG | - | chr8.3:8966194-8966213 | None:intergenic | 45.0% | |
| CTTCAAGGAAAGATGAGGGA+AGG | + | chr8.3:8966206-8966225 | MS.gene57730:CDS | 45.0% | |
| GAACCAAATGGCGTGAATCT+TGG | + | chr8.3:8967278-8967297 | MS.gene57730:intron | 45.0% | |
| GAGTTAAATACCCAGAAGGC+TGG | + | chr8.3:8966156-8966175 | MS.gene57730:CDS | 45.0% | |
| GCCCACAGACAGAATTCTAA+GGG | + | chr8.3:8967233-8967252 | MS.gene57730:intron | 45.0% | |
| GGATCTAGCTAACAAGCATC+AGG | - | chr8.3:8966905-8966924 | None:intergenic | 45.0% | |
| GTATGCACCTCAAGCAACAT+AGG | - | chr8.3:8967799-8967818 | None:intergenic | 45.0% | |
| GTGTGTTCATTGTGGTTGCA+AGG | + | chr8.3:8967895-8967914 | MS.gene57730:CDS | 45.0% | |
| TCTCCTACCACATACACAGT+AGG | + | chr8.3:8966721-8966740 | MS.gene57730:intron | 45.0% | |
| TGCCCACAGACAGAATTCTA+AGG | + | chr8.3:8967232-8967251 | MS.gene57730:intron | 45.0% | |
| TGGTGGTAAAAGGCAAGTGT+TGG | - | chr8.3:8966646-8966665 | None:intergenic | 45.0% | |
| TTCTGTCTGTGGGCAAATTG+TGG | - | chr8.3:8967227-8967246 | None:intergenic | 45.0% | |
| TTGCAGTCCTACTGTGTATG+TGG | - | chr8.3:8966731-8966750 | None:intergenic | 45.0% | |
| ! | ATGAACGCCTATGTTGCTTG+AGG | + | chr8.3:8967789-8967808 | MS.gene57730:CDS | 45.0% |
| ! | CCCTGCGAAATGACCTTTTT+AGG | - | chr8.3:8966850-8966869 | None:intergenic | 45.0% |
| ! | CCTTTTACCACCACAAGAGT+AGG | + | chr8.3:8966653-8966672 | MS.gene57730:intron | 45.0% |
| ! | GAGTAGGAAAGTGTAACCCT+AGG | + | chr8.3:8966669-8966688 | MS.gene57730:intron | 45.0% |
| !!! | TATTTTGTTTTTTTTTTTAT+AGG | + | chr8.3:8966548-8966567 | MS.gene57730:intron | 5.0% |
| CACTCTGCATACACAAGTGG+TGG | - | chr8.3:8967843-8967862 | None:intergenic | 50.0% | |
| GCCCCTTAGAATTCTGTCTG+TGG | - | chr8.3:8967238-8967257 | None:intergenic | 50.0% | |
| GCTGAGAATGACCCACATGA+TGG | + | chr8.3:8966327-8966346 | MS.gene57730:intron | 50.0% | |
| GTTGCAAGGGTTGTGCAAGT+GGG | + | chr8.3:8967909-8967928 | MS.gene57730:CDS | 50.0% | |
| TTGCAAGGGTTGTGCAAGTG+GGG | + | chr8.3:8967910-8967929 | MS.gene57730:CDS | 50.0% | |
| ! | TTGTGTATGCAGAGTGCCCA+AGG | + | chr8.3:8967847-8967866 | MS.gene57730:CDS | 50.0% |
| !! | TAGGATGATCAGAGAGCACC+AGG | - | chr8.3:8966831-8966850 | None:intergenic | 50.0% |
| GACCTTGGCTCCTTACTCAC+AGG | - | chr8.3:8967099-8967118 | None:intergenic | 55.0% | |
| GGGCACTCTGCATACACAAG+TGG | - | chr8.3:8967846-8967865 | None:intergenic | 55.0% | |
| GGTTGCAAGGGTTGTGCAAG+TGG | + | chr8.3:8967908-8967927 | MS.gene57730:CDS | 55.0% | |
| GTGGCGAAATTGTGATCGCG+TGG | - | chr8.3:8967824-8967843 | None:intergenic | 55.0% | |
| TGCCTGTGAGTAAGGAGCCA+AGG | + | chr8.3:8967094-8967113 | MS.gene57730:intron | 55.0% | |
| TTCTCCTCCCTGAGCTCCTT+GGG | - | chr8.3:8967866-8967885 | None:intergenic | 55.0% | |
| ! | GCTCGAGAAGGTATAGCACC+TGG | + | chr8.3:8966810-8966829 | MS.gene57730:intron | 55.0% |
| CAAGGAGCTCAGGGAGGAGA+AGG | + | chr8.3:8967865-8967884 | MS.gene57730:CDS | 60.0% | |
| CTTCTCCTCCCTGAGCTCCT+TGG | - | chr8.3:8967867-8967886 | None:intergenic | 60.0% | |
| ! | CAGAGTGCCCAAGGAGCTCA+GGG | + | chr8.3:8967856-8967875 | MS.gene57730:CDS | 60.0% |
| AGTGCCCAAGGAGCTCAGGG+AGG | + | chr8.3:8967859-8967878 | MS.gene57730:CDS | 65.0% | |
| ! | GCAGAGTGCCCAAGGAGCTC+AGG | + | chr8.3:8967855-8967874 | MS.gene57730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 8966134 | 8967937 | 8966134 | ID=MS.gene57730 |
| chr8.3 | mRNA | 8966134 | 8967937 | 8966134 | ID=MS.gene57730.t1;Parent=MS.gene57730 |
| chr8.3 | exon | 8966134 | 8966227 | 8966134 | ID=MS.gene57730.t1.exon1;Parent=MS.gene57730.t1 |
| chr8.3 | CDS | 8966134 | 8966227 | 8966134 | ID=cds.MS.gene57730.t1;Parent=MS.gene57730.t1 |
| chr8.3 | exon | 8966328 | 8966515 | 8966328 | ID=MS.gene57730.t1.exon2;Parent=MS.gene57730.t1 |
| chr8.3 | CDS | 8966328 | 8966515 | 8966328 | ID=cds.MS.gene57730.t1;Parent=MS.gene57730.t1 |
| chr8.3 | exon | 8967782 | 8967937 | 8967782 | ID=MS.gene57730.t1.exon3;Parent=MS.gene57730.t1 |
| chr8.3 | CDS | 8967782 | 8967937 | 8967782 | ID=cds.MS.gene57730.t1;Parent=MS.gene57730.t1 |
| Gene Sequence |
| Protein sequence |
