Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57770.t1 | XP_003610319.1 | 98.6 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 5.20E-308 | 1066.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57770.t1 | Q42876 | 74.0 | 565 | 134 | 4 | 13 | 567 | 7 | 568 | 5.0e-235 | 815.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57770.t1 | G7JGP9 | 98.6 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 3.7e-308 | 1066.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052514 | MS.gene57770 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene57770 | 0.81867 | 1.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57770.t1 | MTR_4g130860 | 98.589 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1127 |
| MS.gene57770.t1 | MTR_2g460740 | 86.087 | 230 | 32 | 0 | 338 | 567 | 17 | 246 | 4.49e-150 | 431 |
| MS.gene57770.t1 | MTR_2g460760 | 66.567 | 335 | 96 | 7 | 20 | 341 | 26 | 357 | 5.83e-137 | 402 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57770.t1 | AT2G24200 | 78.571 | 518 | 109 | 1 | 50 | 567 | 4 | 519 | 0.0 | 844 |
| MS.gene57770.t1 | AT2G24200 | 78.571 | 518 | 109 | 1 | 50 | 567 | 4 | 519 | 0.0 | 844 |
| MS.gene57770.t1 | AT4G30920 | 75.413 | 545 | 132 | 2 | 24 | 567 | 39 | 582 | 0.0 | 827 |
| MS.gene57770.t1 | AT4G30910 | 72.578 | 547 | 148 | 2 | 22 | 567 | 36 | 581 | 0.0 | 784 |
| MS.gene57770.t1 | AT4G30910 | 69.649 | 570 | 148 | 3 | 22 | 567 | 36 | 604 | 0.0 | 771 |
| MS.gene57770.t1 | AT2G24200 | 72.973 | 518 | 102 | 2 | 50 | 567 | 4 | 483 | 0.0 | 767 |
| MS.gene57770.t1 | AT5G13940 | 72.549 | 51 | 14 | 0 | 278 | 328 | 66 | 116 | 2.55e-16 | 83.2 |
Find 136 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAGATCCATTGACATTAT+TGG | 0.185386 | 8.4:+3201200 | MS.gene57770:CDS |
| TTCAACTACTGCACTGTATA+AGG | 0.215864 | 8.4:+3200692 | MS.gene57770:CDS |
| TCAACCGTTGTTAGGATTAA+AGG | 0.216149 | 8.4:+3200624 | MS.gene57770:CDS |
| ATTAAGCACGCACCTGTTTC+AGG | 0.219303 | 8.4:-3204326 | None:intergenic |
| ATTGATTTGGCAACCTTAAC+TGG | 0.220073 | 8.4:+3203846 | MS.gene57770:CDS |
| TGAACTCATGAAATTTGATA+TGG | 0.264305 | 8.4:+3202285 | MS.gene57770:CDS |
| TCTTCTTCAGATTATTGATT+TGG | 0.273791 | 8.4:+3203833 | MS.gene57770:intron |
| TCAGTGCAAGGAATTGAAAA+TGG | 0.287397 | 8.4:+3201522 | MS.gene57770:CDS |
| TCCCAGTAGCTTTCCTCTAT+TGG | 0.292216 | 8.4:-3204228 | None:intergenic |
| TGAACTGGTAAAAGAAGTTT+TGG | 0.297980 | 8.4:+3204167 | MS.gene57770:CDS |
| AAGCGCTCAGCGACAGGATT+TGG | 0.300652 | 8.4:+3204716 | MS.gene57770:CDS |
| TCCATTGACATTATTGGTCT+TGG | 0.330495 | 8.4:+3201206 | MS.gene57770:CDS |
| GACATTATTGGTCTTGGAAC+GGG | 0.342266 | 8.4:+3201212 | MS.gene57770:CDS |
| TCTTGGAACGGGACCTGAAT+TGG | 0.350120 | 8.4:+3201223 | MS.gene57770:CDS |
| TTGGTCAATCAACCGTTGTT+AGG | 0.351523 | 8.4:+3200616 | MS.gene57770:CDS |
| TATGCTGGAGATGTTTCTTC+TGG | 0.355442 | 8.4:+3201260 | MS.gene57770:CDS |
| GCTCTTGGGCCCTCAATTGC+AGG | 0.355562 | 8.4:+3203882 | MS.gene57770:CDS |
| GAAATCAGGAGTGGCTGATA+TGG | 0.370259 | 8.4:+3204257 | MS.gene57770:CDS |
| AATTGTGCTAGGGGCTGTGC+TGG | 0.374616 | 8.4:+3201130 | MS.gene57770:intron |
| AGGTGAGTGGGGAGAAACTA+TGG | 0.382649 | 8.4:+3204199 | MS.gene57770:CDS |
| TTGAAAATGGGGTCCTATCT+AGG | 0.385305 | 8.4:+3201535 | MS.gene57770:CDS |
| GGGGCATGTGTAGTTGCTCT+TGG | 0.391607 | 8.4:+3203867 | MS.gene57770:CDS |
| GTTGGCAGAAGAGGCATCTA+AGG | 0.398414 | 8.4:+3201450 | MS.gene57770:CDS |
| AGGATTGGTTTGATCGGTCT+TGG | 0.403728 | 8.4:+3200660 | MS.gene57770:CDS |
| TGTAAAGGTCAAGCTGGCTT+TGG | 0.404040 | 8.4:+3201624 | MS.gene57770:CDS |
| CGTTGCTACTCTAGTGGAAT+GGG | 0.404049 | 8.4:+3204739 | MS.gene57770:CDS |
| TTGGTCAAATCAAACCTCTT+GGG | 0.406712 | 8.4:+3202344 | MS.gene57770:CDS |
| TACTGGGAATCAATGAAATC+AGG | 0.417445 | 8.4:+3204243 | MS.gene57770:CDS |
| GGGCATGTGTAGTTGCTCTT+GGG | 0.422892 | 8.4:+3203868 | MS.gene57770:CDS |
| CAGTGCAAGGAATTGAAAAT+GGG | 0.425078 | 8.4:+3201523 | MS.gene57770:CDS |
| GCGTTGCTACTCTAGTGGAA+TGG | 0.434843 | 8.4:+3204738 | MS.gene57770:CDS |
| AACTACACATGCCCCAGTTA+AGG | 0.441925 | 8.4:-3203859 | None:intergenic |
| GAGAATATGATCAGTGGAAC+AGG | 0.442053 | 8.4:+3202678 | MS.gene57770:CDS |
| TGGAAGCTTCTGAGGTGAGT+GGG | 0.445335 | 8.4:+3204187 | MS.gene57770:CDS |
| ATTGTTCTTGCCTCTTCTGA+AGG | 0.447563 | 8.4:+3200771 | MS.gene57770:CDS |
| CGCAGCTGCTAAGTCTGCTC+AGG | 0.448202 | 8.4:+3200734 | MS.gene57770:CDS |
| TCAACTACTGCACTGTATAA+GGG | 0.451795 | 8.4:+3200693 | MS.gene57770:CDS |
| GAACAAGATTGATTTGAAGT+TGG | 0.456119 | 8.4:+3200545 | MS.gene57770:CDS |
| CTTGGTCAAATCAAACCTCT+TGG | 0.456662 | 8.4:+3202343 | MS.gene57770:CDS |
| GACAAGAAGCGCTCAGCGAC+AGG | 0.458688 | 8.4:+3204710 | MS.gene57770:CDS |
| AAGCTGGCTTTGGTTGGAAA+AGG | 0.463001 | 8.4:+3201634 | MS.gene57770:CDS |
| CTTAGGGGATTCGATGTTGG+TGG | 0.464392 | 8.4:-3200242 | None:intergenic |
| ACTGCTTATGCAATTGCATC+TGG | 0.464876 | 8.4:+3200819 | MS.gene57770:CDS |
| TTTGTAGTTTGTTGATGAAA+AGG | 0.465143 | 8.4:+3204646 | MS.gene57770:intron |
| AGCGGTGAAAACATCACTAT+AGG | 0.468504 | 8.4:-3201482 | None:intergenic |
| ACTATGGAGGCTGCCAATAG+AGG | 0.468865 | 8.4:+3204215 | MS.gene57770:CDS |
| TCTTCTGAAGAGGATTTCTC+TGG | 0.470409 | 8.4:+3200588 | MS.gene57770:CDS |
| TCCAAGACCAATAATGTCAA+TGG | 0.470434 | 8.4:-3201207 | None:intergenic |
| TTGGAGGTTTGTAAGTAAGA+TGG | 0.473742 | 8.4:-3201594 | None:intergenic |
| GAGGATTTCTCTGGTAAAGT+TGG | 0.474128 | 8.4:+3200597 | MS.gene57770:CDS |
| GGACTTGGATCAAAGAGGAT+TGG | 0.480400 | 8.4:+3200645 | MS.gene57770:CDS |
| TTAGGGGATTCGATGTTGGT+GGG | 0.482229 | 8.4:-3200241 | None:intergenic |
| AAGATTGATTTGAAGTTGGA+TGG | 0.484032 | 8.4:+3200549 | MS.gene57770:CDS |
| CTCAGGGGTGTTGGCAGAAG+AGG | 0.487176 | 8.4:+3201441 | MS.gene57770:intron |
| ATCTGAAGCTTCTTCTGAAG+AGG | 0.487237 | 8.4:+3200578 | MS.gene57770:CDS |
| GATGTTGTCACAGCTTCAAA+TGG | 0.489147 | 8.4:+3202714 | MS.gene57770:CDS |
| TTATACAGTGCAGTAGTTGA+AGG | 0.495394 | 8.4:-3200690 | None:intergenic |
| AATCAAACCTCTTGGGGTGG+AGG | 0.496211 | 8.4:+3202351 | MS.gene57770:CDS |
| GGCTGCAGCAACACCTAGAT+AGG | 0.496969 | 8.4:-3201548 | None:intergenic |
| ACCTTTACAGATCCACTTGG+AGG | 0.500187 | 8.4:-3201610 | None:intergenic |
| TGCCAATAGAGGAAAGCTAC+TGG | 0.500297 | 8.4:+3204226 | MS.gene57770:CDS |
| ACTCACACTGGCAGATGCTC+TGG | 0.502116 | 8.4:+3203265 | MS.gene57770:CDS |
| GTTGTTAGGATTAAAGGACT+TGG | 0.504860 | 8.4:+3200630 | MS.gene57770:CDS |
| TTGTAACCAAGGTGTTGAAA+AGG | 0.505556 | 8.4:+3203295 | MS.gene57770:CDS |
| AAGGTCAAGCTGGCTTTGGT+TGG | 0.507620 | 8.4:+3201628 | MS.gene57770:CDS |
| GAACTCATGAAATTTGATAT+GGG | 0.511960 | 8.4:+3202286 | MS.gene57770:CDS |
| AGTGAGAAAGAGAGAAGAAG+AGG | 0.514407 | 8.4:-3200122 | None:intergenic |
| TTGATTTGGCAACCTTAACT+GGG | 0.515543 | 8.4:+3203847 | MS.gene57770:CDS |
| GAAGCTGTGACAACATCTCC+AGG | 0.517489 | 8.4:-3202708 | None:intergenic |
| AGTGGAACAGGTATGAGGCC+TGG | 0.518327 | 8.4:+3202690 | MS.gene57770:CDS |
| CCTGCTAATGTTCTCACACC+AGG | 0.523507 | 8.4:+3201314 | MS.gene57770:CDS |
| AATAACAATGGCAGAAGCTA+TGG | 0.524957 | 8.4:-3200083 | None:intergenic |
| AACCTTAGGGGATTCGATGT+TGG | 0.525516 | 8.4:-3200245 | None:intergenic |
| TGGATCTGTAAAGGTCAAGC+TGG | 0.527351 | 8.4:+3201618 | MS.gene57770:CDS |
| ATGTCAATGGATCTAACTGC+TGG | 0.528088 | 8.4:-3201194 | None:intergenic |
| TTAGGCGCTGCAAAAGCACT+TGG | 0.530667 | 8.4:+3202325 | MS.gene57770:CDS |
| GTTGAATGAAAGCTTCGCTT+AGG | 0.533152 | 8.4:-3200169 | None:intergenic |
| ATGAGTTCAATTGAACAGCC+AGG | 0.536964 | 8.4:-3202271 | None:intergenic |
| TGATCAGTGGAACAGGTATG+AGG | 0.537047 | 8.4:+3202685 | MS.gene57770:CDS |
| TGACATTATTGGTCTTGGAA+CGG | 0.541864 | 8.4:+3201211 | MS.gene57770:CDS |
| ACCTCCAAGTGGATCTGTAA+AGG | 0.542413 | 8.4:+3201609 | MS.gene57770:CDS |
| TACAACATCAAGACTGGACC+TGG | 0.549144 | 8.4:+3202253 | MS.gene57770:CDS |
| ATTTGGCGTTGCTACTCTAG+TGG | 0.550785 | 8.4:+3204733 | MS.gene57770:CDS |
| GCCAATAGAGGAAAGCTACT+GGG | 0.555482 | 8.4:+3204227 | MS.gene57770:CDS |
| TCTAGGTGTTGCTGCAGCCT+CGG | 0.555653 | 8.4:+3201552 | MS.gene57770:CDS |
| TTGTTGATGAAAAGGTTCAA+TGG | 0.556752 | 8.4:+3204654 | MS.gene57770:CDS |
| TGGTCAAATCAAACCTCTTG+GGG | 0.558742 | 8.4:+3202345 | MS.gene57770:CDS |
| GGTGGCTACAACATCAAGAC+TGG | 0.559048 | 8.4:+3202247 | MS.gene57770:CDS |
| GTAAACACTGGTGGTAGACC+AGG | 0.562483 | 8.4:+3204279 | MS.gene57770:CDS |
| CCTGGTGTGAGAACATTAGC+AGG | 0.565403 | 8.4:-3201314 | None:intergenic |
| AAGAAGAAAATTAACCTTAG+GGG | 0.566260 | 8.4:-3200257 | None:intergenic |
| ATTGTGCTAGGGGCTGTGCT+GGG | 0.569150 | 8.4:+3201131 | MS.gene57770:intron |
| CACCAACATCGAATCCCCTA+AGG | 0.573206 | 8.4:+3200243 | MS.gene57770:CDS |
| CGGATGTTGATGTGACTGAA+TGG | 0.573571 | 8.4:+3200442 | MS.gene57770:CDS |
| ACTGCACTGTATAAGGGTCT+TGG | 0.574721 | 8.4:+3200699 | MS.gene57770:CDS |
| TTGGAAGCTTCTGAGGTGAG+TGG | 0.576502 | 8.4:+3204186 | MS.gene57770:CDS |
| GGGGTGAGTGAGGCCGAGAG+TGG | 0.577763 | 8.4:-3200221 | None:intergenic |
| TGAAGAAAGTCCTTCAGAAG+AGG | 0.580183 | 8.4:-3200781 | None:intergenic |
| TTGACCTTTACAGATCCACT+TGG | 0.582503 | 8.4:-3201613 | None:intergenic |
| TCAAAGAGGATTGGTTTGAT+CGG | 0.585762 | 8.4:+3200654 | MS.gene57770:CDS |
| CTGGTATATGCTTGTAACCA+AGG | 0.587703 | 8.4:+3203284 | MS.gene57770:CDS |
| CAGTCACGTGACACCACTCT+CGG | 0.591727 | 8.4:+3200208 | MS.gene57770:CDS |
| GAAAGGAGACATACTAGCAG+TGG | 0.593850 | 8.4:+3200464 | MS.gene57770:CDS |
| GGAAGCTTCTGAGGTGAGTG+GGG | 0.596647 | 8.4:+3204188 | MS.gene57770:CDS |
| CGATGTTGGTGGGGTGAGTG+AGG | 0.602177 | 8.4:-3200231 | None:intergenic |
| TGGTTGCATATTGACATGGC+TGG | 0.610791 | 8.4:+3204674 | MS.gene57770:CDS |
| TAGGGGATTCGATGTTGGTG+GGG | 0.614139 | 8.4:-3200240 | None:intergenic |
| TTAAAGGACTTGGATCAAAG+AGG | 0.618325 | 8.4:+3200640 | MS.gene57770:CDS |
| ATTAGATGCTGATCAGTGCA+AGG | 0.622870 | 8.4:+3201510 | MS.gene57770:CDS |
| TGACTAACCTCCACCCCAAG+AGG | 0.623663 | 8.4:-3202358 | None:intergenic |
| GGTGAAAACATCACTATAGG+TGG | 0.627383 | 8.4:-3201479 | None:intergenic |
| TCAAATCAAACCTCTTGGGG+TGG | 0.629691 | 8.4:+3202348 | MS.gene57770:CDS |
| CGCTTCTTGTCATTCCACAC+AGG | 0.634105 | 8.4:-3204698 | None:intergenic |
| CTTACTTACAAACCTCCAAG+TGG | 0.646870 | 8.4:+3201598 | MS.gene57770:CDS |
| ACTGTATAAGGGTCTTGGTG+AGG | 0.650936 | 8.4:+3200704 | MS.gene57770:CDS |
| AAGTCCTTTAATCCTAACAA+CGG | 0.658258 | 8.4:-3200628 | None:intergenic |
| TGATTTGGCAACCTTAACTG+GGG | 0.658915 | 8.4:+3203848 | MS.gene57770:CDS |
| TGCTGAGGGAAGACTCACAC+TGG | 0.659444 | 8.4:+3203253 | MS.gene57770:CDS |
| AAAGGAGACATACTAGCAGT+GGG | 0.660959 | 8.4:+3200465 | MS.gene57770:CDS |
| AGTGCAAGGAATTGAAAATG+GGG | 0.671375 | 8.4:+3201524 | MS.gene57770:CDS |
| TTGACATGGCTGGTCCTGTG+TGG | 0.671937 | 8.4:+3204684 | MS.gene57770:CDS |
| TCAATGGTTGCATATTGACA+TGG | 0.673345 | 8.4:+3204670 | MS.gene57770:CDS |
| GGTGAACAACACTGATGCTG+AGG | 0.673515 | 8.4:+3203238 | MS.gene57770:intron |
| GTGAACAACACTGATGCTGA+GGG | 0.676137 | 8.4:+3203239 | MS.gene57770:CDS |
| CTCATGAAATTTGATATGGG+TGG | 0.679380 | 8.4:+3202289 | MS.gene57770:CDS |
| GTTGATGTGACTGAATGGAA+AGG | 0.683142 | 8.4:+3200447 | MS.gene57770:CDS |
| GGAATCAATGAAATCAGGAG+TGG | 0.685410 | 8.4:+3204248 | MS.gene57770:CDS |
| AACACTGGTGGTAGACCAGG+TGG | 0.694030 | 8.4:+3204282 | MS.gene57770:CDS |
| TAAGTAAGATGGATAAAACG+AGG | 0.697138 | 8.4:-3201583 | None:intergenic |
| GCTTGTGAGAATATGATCAG+TGG | 0.702653 | 8.4:+3202672 | MS.gene57770:CDS |
| GCAGCAGTGATAGAACCACC+TGG | 0.709003 | 8.4:-3204297 | None:intergenic |
| GTAAGATGGATAAAACGAGG+AGG | 0.715083 | 8.4:-3201580 | None:intergenic |
| AAAACGAGGAGGATTTGCCG+AGG | 0.716110 | 8.4:-3201569 | None:intergenic |
| GTGGCTGATATGGTAAACAC+TGG | 0.719705 | 8.4:+3204267 | MS.gene57770:CDS |
| TGAGTGGGGAGAAACTATGG+AGG | 0.741229 | 8.4:+3204202 | MS.gene57770:CDS |
| GCTGATATGGTAAACACTGG+TGG | 0.751322 | 8.4:+3204270 | MS.gene57770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAATAAATATGAAA+TGG | - | chr8.4:3202160-3202179 | None:intergenic | 10.0% |
| !! | CAAAAAAATAAATATGAAAT+GGG | - | chr8.4:3202159-3202178 | None:intergenic | 10.0% |
| !!! | ATTTAATATTTTGATAGATT+TGG | + | chr8.4:3203410-3203429 | MS.gene57770:intron | 10.0% |
| !!! | TATTTTAAGAAACTTATTAT+TGG | + | chr8.4:3204543-3204562 | MS.gene57770:intron | 10.0% |
| !! | AAAAAAAATCAAATGAGATT+AGG | - | chr8.4:3202506-3202525 | None:intergenic | 15.0% |
| !! | AAAACATTAGTAAATAGTAA+TGG | - | chr8.4:3200930-3200949 | None:intergenic | 15.0% |
| !! | AAATATGTATATATGTCATA+AGG | + | chr8.4:3202867-3202886 | MS.gene57770:intron | 15.0% |
| !! | AAATCTGTTTATGATTTATA+GGG | - | chr8.4:3203361-3203380 | None:intergenic | 15.0% |
| !! | GAAGTTTGTAAATATAAAAA+AGG | - | chr8.4:3203711-3203730 | None:intergenic | 15.0% |
| !! | TATAAATCATAAACAGATTT+CGG | + | chr8.4:3203361-3203380 | MS.gene57770:intron | 15.0% |
| !! | TGAATTGTAAATAAAAAACA+CGG | - | chr8.4:3201688-3201707 | None:intergenic | 15.0% |
| !!! | AAAATCAATGTTTCTAAAAA+TGG | - | chr8.4:3200995-3201014 | None:intergenic | 15.0% |
| !!! | AAATCAATGTTTCTAAAAAT+GGG | - | chr8.4:3200994-3201013 | None:intergenic | 15.0% |
| !!! | ATATACTAGTTTCTTAAATA+TGG | + | chr8.4:3204572-3204591 | MS.gene57770:intron | 15.0% |
| !!! | CTAAGTTCATATATTATTTT+GGG | + | chr8.4:3204031-3204050 | MS.gene57770:intron | 15.0% |
| !!! | TAAGTTCATATATTATTTTG+GGG | + | chr8.4:3204032-3204051 | MS.gene57770:intron | 15.0% |
| !!! | TGAAAGATATATTATTTTGA+AGG | + | chr8.4:3204126-3204145 | MS.gene57770:intron | 15.0% |
| !!! | TGAAATTTTTACTATAGATT+AGG | - | chr8.4:3204510-3204529 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTGTTTGATGT+AGG | + | chr8.4:3202167-3202186 | MS.gene57770:intron | 15.0% |
| !! | AAATCTATTGTAGTTATACT+TGG | + | chr8.4:3203059-3203078 | MS.gene57770:intron | 20.0% |
| !! | AAATGTTAAGCAAATGATTT+GGG | - | chr8.4:3203394-3203413 | None:intergenic | 20.0% |
| !! | AATAATCATTTATGATGCTT+GGG | + | chr8.4:3202990-3203009 | MS.gene57770:intron | 20.0% |
| !! | ACATGAAATTGAAAAATTGA+AGG | - | chr8.4:3202398-3202417 | None:intergenic | 20.0% |
| !! | ATATTCTTAAAGAATGAGAA+TGG | - | chr8.4:3203626-3203645 | None:intergenic | 20.0% |
| !! | ATGAAACAAAAAAAGAAACA+TGG | - | chr8.4:3200295-3200314 | None:intergenic | 20.0% |
| !! | CCAAAATAATATATGAACTT+AGG | - | chr8.4:3204033-3204052 | None:intergenic | 20.0% |
| !! | GAAAAATTCAAACAATAACA+CGG | - | chr8.4:3204363-3204382 | None:intergenic | 20.0% |
| !! | GAAATCTGTTTATGATTTAT+AGG | - | chr8.4:3203362-3203381 | None:intergenic | 20.0% |
| !! | GTACAATAGGTTAAATTTAT+TGG | - | chr8.4:3202787-3202806 | None:intergenic | 20.0% |
| !! | GTTAATACTTAACAAAATCA+AGG | - | chr8.4:3203169-3203188 | None:intergenic | 20.0% |
| !! | TAAATGTTAAGCAAATGATT+TGG | - | chr8.4:3203395-3203414 | None:intergenic | 20.0% |
| !! | TAAATTTAACCTATTGTACA+TGG | + | chr8.4:3202788-3202807 | MS.gene57770:intron | 20.0% |
| !! | TATTTACAATTCATAAGACA+TGG | + | chr8.4:3201695-3201714 | MS.gene57770:intron | 20.0% |
| !! | TGAAACAAAAAAAGAAACAT+GGG | - | chr8.4:3200294-3200313 | None:intergenic | 20.0% |
| !! | TTTAAGAAACTTATTATTGG+AGG | + | chr8.4:3204546-3204565 | MS.gene57770:intron | 20.0% |
| !!! | AACATTTTATATGATGTACT+AGG | + | chr8.4:3203186-3203205 | MS.gene57770:intron | 20.0% |
| !!! | AATCAATGTTTCTAAAAATG+GGG | - | chr8.4:3200993-3201012 | None:intergenic | 20.0% |
| !!! | ATTGCGAAACTTTTTTAAAA+TGG | - | chr8.4:3202973-3202992 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTCTCAATGTAAT+TGG | + | chr8.4:3204376-3204395 | MS.gene57770:intron | 20.0% |
| !!! | CCTAAGTTCATATATTATTT+TGG | + | chr8.4:3204030-3204049 | MS.gene57770:intron | 20.0% |
| !!! | GCTTCTTCAAATATTTTATT+TGG | + | chr8.4:3202914-3202933 | MS.gene57770:intron | 20.0% |
| !!! | GTTGATAAATCTTTAATATG+AGG | + | chr8.4:3201812-3201831 | MS.gene57770:intron | 20.0% |
| !!! | TCATTCTTTAAGAATATCTA+TGG | + | chr8.4:3203629-3203648 | MS.gene57770:intron | 20.0% |
| ! | AACGTAATAAAAAAGCAGTA+AGG | - | chr8.4:3202210-3202229 | None:intergenic | 25.0% |
| ! | AAGAAGAAAATTAACCTTAG+GGG | - | chr8.4:3200260-3200279 | None:intergenic | 25.0% |
| ! | AGACATGGAAAAATTTGAAA+CGG | + | chr8.4:3201710-3201729 | MS.gene57770:intron | 25.0% |
| ! | AGTCAAAATGTGAATTTAGT+TGG | - | chr8.4:3203580-3203599 | None:intergenic | 25.0% |
| ! | AGTGTTTGATGTGTTAAAAT+AGG | + | chr8.4:3200897-3200916 | MS.gene57770:intron | 25.0% |
| ! | ATAATAAGAGTTGTTGAGTA+TGG | + | chr8.4:3202533-3202552 | MS.gene57770:intron | 25.0% |
| ! | ATATGTTTACAGAGTTCATA+GGG | - | chr8.4:3203136-3203155 | None:intergenic | 25.0% |
| ! | CAAAATTTCTTGCTAGAATT+AGG | + | chr8.4:3203969-3203988 | MS.gene57770:intron | 25.0% |
| ! | CAATAATCATTTATGATGCT+TGG | + | chr8.4:3202989-3203008 | MS.gene57770:intron | 25.0% |
| ! | GAACTCATGAAATTTGATAT+GGG | + | chr8.4:3202286-3202305 | MS.gene57770:CDS | 25.0% |
| ! | GAAGAAGAAAATTAACCTTA+GGG | - | chr8.4:3200261-3200280 | None:intergenic | 25.0% |
| ! | GGAATATGGTAATAAAAAAG+AGG | - | chr8.4:3203950-3203969 | None:intergenic | 25.0% |
| ! | GTGTTTGATGTGTTAAAATA+GGG | + | chr8.4:3200898-3200917 | MS.gene57770:intron | 25.0% |
| ! | TGAACTCATGAAATTTGATA+TGG | + | chr8.4:3202285-3202304 | MS.gene57770:CDS | 25.0% |
| ! | TGAAGAAGAAAATTAACCTT+AGG | - | chr8.4:3200262-3200281 | None:intergenic | 25.0% |
| ! | TGTAAATAAAAAACACGGTT+TGG | - | chr8.4:3201683-3201702 | None:intergenic | 25.0% |
| ! | TTCAAATGGAAAAACTATTG+AGG | + | chr8.4:3202728-3202747 | MS.gene57770:CDS | 25.0% |
| !! | AAAACTCTCAATATTTTGCT+TGG | + | chr8.4:3203996-3204015 | MS.gene57770:intron | 25.0% |
| !! | AATTTTCACAAACACGTTAA+AGG | - | chr8.4:3200398-3200417 | None:intergenic | 25.0% |
| !! | ATCATCACAAACTTTAGAAA+TGG | + | chr8.4:3201016-3201035 | MS.gene57770:intron | 25.0% |
| !! | CTAATTCTAGCAAGAAATTT+TGG | - | chr8.4:3203971-3203990 | None:intergenic | 25.0% |
| !! | GTTGTTTCAACTCAAAATTA+AGG | + | chr8.4:3202116-3202135 | MS.gene57770:intron | 25.0% |
| !! | TCTTCTTCAGATTATTGATT+TGG | + | chr8.4:3203833-3203852 | MS.gene57770:intron | 25.0% |
| !! | TTTATACAAACCCGTTATTT+TGG | - | chr8.4:3202464-3202483 | None:intergenic | 25.0% |
| !!! | AATGATTTGTTTGGAATACT+TGG | + | chr8.4:3202594-3202613 | MS.gene57770:intron | 25.0% |
| !!! | ATCAGCATCTAATATTTTAG+CGG | - | chr8.4:3201503-3201522 | None:intergenic | 25.0% |
| !!! | ATTATCCATGGTTTTGATTA+TGG | + | chr8.4:3201746-3201765 | MS.gene57770:intron | 25.0% |
| !!! | GGATTTTCATTTTACTTTTC+TGG | + | chr8.4:3202554-3202573 | MS.gene57770:intron | 25.0% |
| !!! | GTTTCTTCTGGAATAATTTT+TGG | + | chr8.4:3201272-3201291 | MS.gene57770:CDS | 25.0% |
| !!! | TAGCAAGAAATTTTGGAATA+TGG | - | chr8.4:3203964-3203983 | None:intergenic | 25.0% |
| !!! | TTATTTTTACCTGCAATTGA+GGG | - | chr8.4:3203894-3203913 | None:intergenic | 25.0% |
| !!! | TTCTGGAATAATTTTTGGAA+GGG | + | chr8.4:3201277-3201296 | MS.gene57770:CDS | 25.0% |
| !!! | TTTATTTTTACCTGCAATTG+AGG | - | chr8.4:3203895-3203914 | None:intergenic | 25.0% |
| !!! | TTTGTAGTTTGTTGATGAAA+AGG | + | chr8.4:3204646-3204665 | MS.gene57770:intron | 25.0% |
| !!! | TTTTCATTTTACTTTTCTGG+TGG | + | chr8.4:3202557-3202576 | MS.gene57770:intron | 25.0% |
| !!! | TTTTGAGAAAGCAATAACAA+TGG | - | chr8.4:3200098-3200117 | None:intergenic | 25.0% |
| AAGTCCTTTAATCCTAACAA+CGG | - | chr8.4:3200631-3200650 | None:intergenic | 30.0% | |
| AATAAAAACCTTGCATATGC+AGG | + | chr8.4:3202632-3202651 | MS.gene57770:intron | 30.0% | |
| AATAATTTGATCCATGTAGC+CGG | - | chr8.4:3201909-3201928 | None:intergenic | 30.0% | |
| ATATACACACAAGACAAGTA+GGG | - | chr8.4:3201049-3201068 | None:intergenic | 30.0% | |
| ATCAAAACCATGGATAATAC+AGG | - | chr8.4:3201744-3201763 | None:intergenic | 30.0% | |
| ATGTACTAGGAATTTGACAT+TGG | + | chr8.4:3203199-3203218 | MS.gene57770:intron | 30.0% | |
| ATTATTGGGTGATGTAGTAT+GGG | + | chr8.4:3202434-3202453 | MS.gene57770:intron | 30.0% | |
| ATTCCAAACAAATCATTCCA+CGG | - | chr8.4:3202591-3202610 | None:intergenic | 30.0% | |
| CACAATCACTTGGATAAATA+TGG | - | chr8.4:3204466-3204485 | None:intergenic | 30.0% | |
| CATATGTTTACAGAGTTCAT+AGG | - | chr8.4:3203137-3203156 | None:intergenic | 30.0% | |
| GATGAAAGAGAATTACTAGT+AGG | + | chr8.4:3203451-3203470 | MS.gene57770:intron | 30.0% | |
| GTTAGATCCATTGACATTAT+TGG | + | chr8.4:3201200-3201219 | MS.gene57770:CDS | 30.0% | |
| TAAGTAAGATGGATAAAACG+AGG | - | chr8.4:3201586-3201605 | None:intergenic | 30.0% | |
| TACAATGGCATACTAAGTAT+TGG | + | chr8.4:3202080-3202099 | MS.gene57770:intron | 30.0% | |
| TATGTTTACAGAGTTCATAG+GGG | - | chr8.4:3203135-3203154 | None:intergenic | 30.0% | |
| TCAAAACCATGGATAATACA+GGG | - | chr8.4:3201743-3201762 | None:intergenic | 30.0% | |
| ! | AAAGATCTCTTTTTCTGCTA+CGG | + | chr8.4:3200422-3200441 | MS.gene57770:intron | 30.0% |
| ! | AAGATTTGCTTAGGGATTAT+TGG | + | chr8.4:3202419-3202438 | MS.gene57770:intron | 30.0% |
| ! | AGATTTGCTTAGGGATTATT+GGG | + | chr8.4:3202420-3202439 | MS.gene57770:intron | 30.0% |
| ! | AGGTTAGTCACTTAAATCAT+TGG | + | chr8.4:3202371-3202390 | MS.gene57770:intron | 30.0% |
| ! | ATATAAGAGTGTACTCAAGA+CGG | - | chr8.4:3203501-3203520 | None:intergenic | 30.0% |
| ! | ATTGGTGTAACTTTTTGTGT+AGG | + | chr8.4:3203217-3203236 | MS.gene57770:intron | 30.0% |
| ! | GACATGGAAAAATTTGAAAC+GGG | + | chr8.4:3201711-3201730 | MS.gene57770:intron | 30.0% |
| ! | TCTAAAATCTGATCTGTACT+TGG | + | chr8.4:3201406-3201425 | MS.gene57770:intron | 30.0% |
| ! | TCTTTTACCAGTTCATCATT+GGG | - | chr8.4:3204162-3204181 | None:intergenic | 30.0% |
| ! | TGAACTGGTAAAAGAAGTTT+TGG | + | chr8.4:3204167-3204186 | MS.gene57770:CDS | 30.0% |
| ! | TTCATGTCAAGATTTGCTTA+GGG | + | chr8.4:3202411-3202430 | MS.gene57770:intron | 30.0% |
| ! | TTCTTTTACCAGTTCATCAT+TGG | - | chr8.4:3204163-3204182 | None:intergenic | 30.0% |
| ! | TTGCAATTGAAGAGAAGTTT+TGG | + | chr8.4:3203109-3203128 | MS.gene57770:intron | 30.0% |
| ! | TTGTTGATGAAAAGGTTCAA+TGG | + | chr8.4:3204654-3204673 | MS.gene57770:CDS | 30.0% |
| ! | TTTCATGTCAAGATTTGCTT+AGG | + | chr8.4:3202410-3202429 | MS.gene57770:intron | 30.0% |
| !! | AAGATTGATTTGAAGTTGGA+TGG | + | chr8.4:3200549-3200568 | MS.gene57770:CDS | 30.0% |
| !! | CTCATATGTTGTTTGTTTTC+TGG | + | chr8.4:3203730-3203749 | MS.gene57770:intron | 30.0% |
| !! | GAAAAGGTTTGACTTTTGAT+AGG | + | chr8.4:3201650-3201669 | MS.gene57770:CDS | 30.0% |
| !! | GAACAAGATTGATTTGAAGT+TGG | + | chr8.4:3200545-3200564 | MS.gene57770:CDS | 30.0% |
| !! | GGACAAGTTTACTTTTGTTT+CGG | + | chr8.4:3203650-3203669 | MS.gene57770:intron | 30.0% |
| !! | GTTTGACAGTTTTATCTTTC+AGG | - | chr8.4:3204090-3204109 | None:intergenic | 30.0% |
| !!! | AGTTTTAGAATACTGCTAAC+TGG | + | chr8.4:3203801-3203820 | MS.gene57770:intron | 30.0% |
| !!! | CTTCTGGAATAATTTTTGGA+AGG | + | chr8.4:3201276-3201295 | MS.gene57770:CDS | 30.0% |
| AAAATGAACCTGCATATGCA+AGG | - | chr8.4:3202643-3202662 | None:intergenic | 35.0% | |
| AAATTATTGGTCCGTCTCAT+AGG | + | chr8.4:3201921-3201940 | MS.gene57770:intron | 35.0% | |
| AATAACAATGGCAGAAGCTA+TGG | - | chr8.4:3200086-3200105 | None:intergenic | 35.0% | |
| AATTATTGGTCCGTCTCATA+GGG | + | chr8.4:3201922-3201941 | MS.gene57770:intron | 35.0% | |
| ACTCAAAATTAAGGAGTCCA+TGG | + | chr8.4:3202125-3202144 | MS.gene57770:intron | 35.0% | |
| ACTCAAGACGGTGTAAAAAA+TGG | - | chr8.4:3203489-3203508 | None:intergenic | 35.0% | |
| AGCAGAAAAAGAGATCTTTC+AGG | - | chr8.4:3200421-3200440 | None:intergenic | 35.0% | |
| AGTATGCCATTGTAGCAAAT+TGG | - | chr8.4:3202074-3202093 | None:intergenic | 35.0% | |
| AGTGCAAGGAATTGAAAATG+GGG | + | chr8.4:3201524-3201543 | MS.gene57770:CDS | 35.0% | |
| ATATATGTCATAAGGTCCAG+TGG | + | chr8.4:3202875-3202894 | MS.gene57770:intron | 35.0% | |
| ATGGAAAAACTATTGAGGTG+AGG | + | chr8.4:3202733-3202752 | MS.gene57770:intron | 35.0% | |
| CAGTGCAAGGAATTGAAAAT+GGG | + | chr8.4:3201523-3201542 | MS.gene57770:CDS | 35.0% | |
| CATATACACACAAGACAAGT+AGG | - | chr8.4:3201050-3201069 | None:intergenic | 35.0% | |
| CTCAAGACGGTGTAAAAAAT+GGG | - | chr8.4:3203488-3203507 | None:intergenic | 35.0% | |
| CTCATGAAATTTGATATGGG+TGG | + | chr8.4:3202289-3202308 | MS.gene57770:CDS | 35.0% | |
| GATTATTGGGTGATGTAGTA+TGG | + | chr8.4:3202433-3202452 | MS.gene57770:intron | 35.0% | |
| GCATCAATACCATGTACAAT+AGG | - | chr8.4:3202800-3202819 | None:intergenic | 35.0% | |
| GGCTACATGGATCAAATTAT+TGG | + | chr8.4:3201908-3201927 | MS.gene57770:intron | 35.0% | |
| GTATGGGATCTCCAAAATAA+CGG | + | chr8.4:3202450-3202469 | MS.gene57770:intron | 35.0% | |
| GTTGTTAGGATTAAAGGACT+TGG | + | chr8.4:3200630-3200649 | MS.gene57770:CDS | 35.0% | |
| TACTGGGAATCAATGAAATC+AGG | + | chr8.4:3204243-3204262 | MS.gene57770:CDS | 35.0% | |
| TATAGCTACATTTGATGCGT+GGG | + | chr8.4:3201103-3201122 | MS.gene57770:intron | 35.0% | |
| TATGGGATCTCCAAAATAAC+GGG | + | chr8.4:3202451-3202470 | MS.gene57770:intron | 35.0% | |
| TATGGTACCAAAACTATCAG+CGG | + | chr8.4:3201764-3201783 | MS.gene57770:intron | 35.0% | |
| TCAACCGTTGTTAGGATTAA+AGG | + | chr8.4:3200624-3200643 | MS.gene57770:CDS | 35.0% | |
| TCAACTACTGCACTGTATAA+GGG | + | chr8.4:3200693-3200712 | MS.gene57770:CDS | 35.0% | |
| TCAATGGTTGCATATTGACA+TGG | + | chr8.4:3204670-3204689 | MS.gene57770:CDS | 35.0% | |
| TCAGTGCAAGGAATTGAAAA+TGG | + | chr8.4:3201522-3201541 | MS.gene57770:CDS | 35.0% | |
| TCCAAGACCAATAATGTCAA+TGG | - | chr8.4:3201210-3201229 | None:intergenic | 35.0% | |
| TGAAATGGGAAAGAAAACCA+TGG | - | chr8.4:3202145-3202164 | None:intergenic | 35.0% | |
| TGGAAAAACTATTGAGGTGA+GGG | + | chr8.4:3202734-3202753 | MS.gene57770:intron | 35.0% | |
| TGGTACCATAATCAAAACCA+TGG | - | chr8.4:3201754-3201773 | None:intergenic | 35.0% | |
| TTAAAGGACTTGGATCAAAG+AGG | + | chr8.4:3200640-3200659 | MS.gene57770:CDS | 35.0% | |
| TTATACAGTGCAGTAGTTGA+AGG | - | chr8.4:3200693-3200712 | None:intergenic | 35.0% | |
| TTATAGCTACATTTGATGCG+TGG | + | chr8.4:3201102-3201121 | MS.gene57770:intron | 35.0% | |
| TTCAACTACTGCACTGTATA+AGG | + | chr8.4:3200692-3200711 | MS.gene57770:CDS | 35.0% | |
| TTGGAGGTTTGTAAGTAAGA+TGG | - | chr8.4:3201597-3201616 | None:intergenic | 35.0% | |
| TTGGTCAAATCAAACCTCTT+GGG | + | chr8.4:3202344-3202363 | MS.gene57770:CDS | 35.0% | |
| ! | AGTATACCTTTTCAACACCT+TGG | - | chr8.4:3203304-3203323 | None:intergenic | 35.0% |
| ! | CACAAACTTTAGAAATGGTG+AGG | + | chr8.4:3201021-3201040 | MS.gene57770:intron | 35.0% |
| ! | GATTCGACAAAGTTTTACGT+TGG | + | chr8.4:3201944-3201963 | MS.gene57770:intron | 35.0% |
| ! | GATTTGTTTGGAATACTTGG+TGG | + | chr8.4:3202597-3202616 | MS.gene57770:intron | 35.0% |
| ! | GTTAAGCAAATGATTTGGGA+AGG | - | chr8.4:3203390-3203409 | None:intergenic | 35.0% |
| ! | TCCATTGACATTATTGGTCT+TGG | + | chr8.4:3201206-3201225 | MS.gene57770:CDS | 35.0% |
| ! | TTCATAACCGCTGATAGTTT+TGG | - | chr8.4:3201774-3201793 | None:intergenic | 35.0% |
| !! | ATTGATTTGGCAACCTTAAC+TGG | + | chr8.4:3203846-3203865 | MS.gene57770:CDS | 35.0% |
| !! | TCAAAGAGGATTGGTTTGAT+CGG | + | chr8.4:3200654-3200673 | MS.gene57770:CDS | 35.0% |
| !! | TGACATTATTGGTCTTGGAA+CGG | + | chr8.4:3201211-3201230 | MS.gene57770:CDS | 35.0% |
| !! | TTGAGCTTTTTCTCCAATTC+AGG | - | chr8.4:3201239-3201258 | None:intergenic | 35.0% |
| !! | TTGATTTGGCAACCTTAACT+GGG | + | chr8.4:3203847-3203866 | MS.gene57770:CDS | 35.0% |
| !! | TTGTAACCAAGGTGTTGAAA+AGG | + | chr8.4:3203295-3203314 | MS.gene57770:CDS | 35.0% |
| !! | TTTCCGTGGAATGATTTGTT+TGG | + | chr8.4:3202585-3202604 | MS.gene57770:intron | 35.0% |
| !!! | ACTTGTTGATTTTCTCGTTG+TGG | + | chr8.4:3200342-3200361 | MS.gene57770:intron | 35.0% |
| !!! | ATCTGTACTTGGTGATGTTT+TGG | + | chr8.4:3201417-3201436 | MS.gene57770:intron | 35.0% |
| !!! | CGTTTTCTGCTTTTTATCAG+TGG | + | chr8.4:3202226-3202245 | MS.gene57770:intron | 35.0% |
| !!! | CTTGTTGATTTTCTCGTTGT+GGG | + | chr8.4:3200343-3200362 | MS.gene57770:intron | 35.0% |
| !!! | TTTCTGCTTTTTATCAGTGG+TGG | + | chr8.4:3202229-3202248 | MS.gene57770:intron | 35.0% |
| AAACCATGGATAATACAGGG+TGG | - | chr8.4:3201740-3201759 | None:intergenic | 40.0% | |
| AAAGGAGACATACTAGCAGT+GGG | + | chr8.4:3200465-3200484 | MS.gene57770:CDS | 40.0% | |
| ACAAATTACATGCTGTCCAC+TGG | - | chr8.4:3202894-3202913 | None:intergenic | 40.0% | |
| ACTGCTTATGCAATTGCATC+TGG | + | chr8.4:3200819-3200838 | MS.gene57770:CDS | 40.0% | |
| AGCGGTGAAAACATCACTAT+AGG | - | chr8.4:3201485-3201504 | None:intergenic | 40.0% | |
| AGTGAGAAAGAGAGAAGAAG+AGG | - | chr8.4:3200125-3200144 | None:intergenic | 40.0% | |
| ATGAGTTCAATTGAACAGCC+AGG | - | chr8.4:3202274-3202293 | None:intergenic | 40.0% | |
| ATGCTTGACAAGGCTAACAT+AGG | + | chr8.4:3202018-3202037 | MS.gene57770:intron | 40.0% | |
| ATGTAATTGGACAGCTGTGT+TGG | + | chr8.4:3204389-3204408 | MS.gene57770:intron | 40.0% | |
| ATGTCAATGGATCTAACTGC+TGG | - | chr8.4:3201197-3201216 | None:intergenic | 40.0% | |
| ATTAGATGCTGATCAGTGCA+AGG | + | chr8.4:3201510-3201529 | MS.gene57770:CDS | 40.0% | |
| ATTCCACCCTGTATTATCCA+TGG | + | chr8.4:3201734-3201753 | MS.gene57770:intron | 40.0% | |
| ATTGTTCTTGCCTCTTCTGA+AGG | + | chr8.4:3200771-3200790 | MS.gene57770:CDS | 40.0% | |
| CAGATGTTATTACCACTCCA+CGG | - | chr8.4:3204418-3204437 | None:intergenic | 40.0% | |
| CTGGTATATGCTTGTAACCA+AGG | + | chr8.4:3203284-3203303 | MS.gene57770:CDS | 40.0% | |
| CTTACTTACAAACCTCCAAG+TGG | + | chr8.4:3201598-3201617 | MS.gene57770:CDS | 40.0% | |
| CTTGGTCAAATCAAACCTCT+TGG | + | chr8.4:3202343-3202362 | MS.gene57770:CDS | 40.0% | |
| GAGAAAAAGCTCAAGTATGC+TGG | + | chr8.4:3201245-3201264 | MS.gene57770:CDS | 40.0% | |
| GAGAATATGATCAGTGGAAC+AGG | + | chr8.4:3202678-3202697 | MS.gene57770:CDS | 40.0% | |
| GAGGATTTCTCTGGTAAAGT+TGG | + | chr8.4:3200597-3200616 | MS.gene57770:CDS | 40.0% | |
| GATGTTGTCACAGCTTCAAA+TGG | + | chr8.4:3202714-3202733 | MS.gene57770:CDS | 40.0% | |
| GCTTGTGAGAATATGATCAG+TGG | + | chr8.4:3202672-3202691 | MS.gene57770:CDS | 40.0% | |
| GGAATCAATGAAATCAGGAG+TGG | + | chr8.4:3204248-3204267 | MS.gene57770:CDS | 40.0% | |
| GGTGAAAACATCACTATAGG+TGG | - | chr8.4:3201482-3201501 | None:intergenic | 40.0% | |
| GTAAGATGGATAAAACGAGG+AGG | - | chr8.4:3201583-3201602 | None:intergenic | 40.0% | |
| GTTGAATGAAAGCTTCGCTT+AGG | - | chr8.4:3200172-3200191 | None:intergenic | 40.0% | |
| GTTGATGTGACTGAATGGAA+AGG | + | chr8.4:3200447-3200466 | MS.gene57770:CDS | 40.0% | |
| TAAAAGGAGAGGGTTGTGTT+GGG | - | chr8.4:3201979-3201998 | None:intergenic | 40.0% | |
| TATGCTGGAGATGTTTCTTC+TGG | + | chr8.4:3201260-3201279 | MS.gene57770:CDS | 40.0% | |
| TATTGAGGTGAGGGTTTACT+AGG | + | chr8.4:3202743-3202762 | MS.gene57770:intron | 40.0% | |
| TGAAGAAAGTCCTTCAGAAG+AGG | - | chr8.4:3200784-3200803 | None:intergenic | 40.0% | |
| TGGTCAAATCAAACCTCTTG+GGG | + | chr8.4:3202345-3202364 | MS.gene57770:CDS | 40.0% | |
| TGTAATTGGACAGCTGTGTT+GGG | + | chr8.4:3204390-3204409 | MS.gene57770:intron | 40.0% | |
| TTGAAAATGGGGTCCTATCT+AGG | + | chr8.4:3201535-3201554 | MS.gene57770:CDS | 40.0% | |
| TTGACCTTTACAGATCCACT+TGG | - | chr8.4:3201616-3201635 | None:intergenic | 40.0% | |
| TTGGTCAATCAACCGTTGTT+AGG | + | chr8.4:3200616-3200635 | MS.gene57770:CDS | 40.0% | |
| TTTGTCGAATCCCTATGAGA+CGG | - | chr8.4:3201935-3201954 | None:intergenic | 40.0% | |
| ! | ATCTGAAGCTTCTTCTGAAG+AGG | + | chr8.4:3200578-3200597 | MS.gene57770:CDS | 40.0% |
| ! | CAAGCCTTATCCCACTAAAT+GGG | + | chr8.4:3201882-3201901 | MS.gene57770:intron | 40.0% |
| ! | GTTTTCACCCAATGATGAAC+TGG | + | chr8.4:3204152-3204171 | MS.gene57770:CDS | 40.0% |
| ! | TAGGACAGTTCAAGTTCCAA+TGG | - | chr8.4:3204491-3204510 | None:intergenic | 40.0% |
| ! | TCTTCTGAAGAGGATTTCTC+TGG | + | chr8.4:3200588-3200607 | MS.gene57770:CDS | 40.0% |
| ! | TGATTTGGCAACCTTAACTG+GGG | + | chr8.4:3203848-3203867 | MS.gene57770:CDS | 40.0% |
| !! | GACATTATTGGTCTTGGAAC+GGG | + | chr8.4:3201212-3201231 | MS.gene57770:CDS | 40.0% |
| !! | GCATTGCCAATTTGCTACAA+TGG | + | chr8.4:3202065-3202084 | MS.gene57770:intron | 40.0% |
| !! | TTTAAAGTGTCGTACGAACC+TGG | - | chr8.4:3201335-3201354 | None:intergenic | 40.0% |
| !!! | AGAAGTTTTGGAAGCTTCTG+AGG | + | chr8.4:3204179-3204198 | MS.gene57770:CDS | 40.0% |
| !!! | TTGGTGATGTTTTGGTCTCA+GGG | + | chr8.4:3201425-3201444 | MS.gene57770:intron | 40.0% |
| AACCTTAGGGGATTCGATGT+TGG | - | chr8.4:3200248-3200267 | None:intergenic | 45.0% | |
| AACTACACATGCCCCAGTTA+AGG | - | chr8.4:3203862-3203881 | None:intergenic | 45.0% | |
| ACCTCCAAGTGGATCTGTAA+AGG | + | chr8.4:3201609-3201628 | MS.gene57770:CDS | 45.0% | |
| ACCTTTACAGATCCACTTGG+AGG | - | chr8.4:3201613-3201632 | None:intergenic | 45.0% | |
| ACTGCACTGTATAAGGGTCT+TGG | + | chr8.4:3200699-3200718 | MS.gene57770:CDS | 45.0% | |
| ACTGTATAAGGGTCTTGGTG+AGG | + | chr8.4:3200704-3200723 | MS.gene57770:CDS | 45.0% | |
| ATTAAGCACGCACCTGTTTC+AGG | - | chr8.4:3204329-3204348 | None:intergenic | 45.0% | |
| ATTTGGCGTTGCTACTCTAG+TGG | + | chr8.4:3204733-3204752 | MS.gene57770:CDS | 45.0% | |
| CCATTTAGTGGGATAAGGCT+TGG | - | chr8.4:3201884-3201903 | None:intergenic | 45.0% | |
| CGGATGTTGATGTGACTGAA+TGG | + | chr8.4:3200442-3200461 | MS.gene57770:CDS | 45.0% | |
| CGTTGCTACTCTAGTGGAAT+GGG | + | chr8.4:3204739-3204758 | MS.gene57770:CDS | 45.0% | |
| CTTATCCCACTAAATGGGTC+CGG | + | chr8.4:3201887-3201906 | MS.gene57770:intron | 45.0% | |
| GAAAGGAGACATACTAGCAG+TGG | + | chr8.4:3200464-3200483 | MS.gene57770:CDS | 45.0% | |
| GAAATCAGGAGTGGCTGATA+TGG | + | chr8.4:3204257-3204276 | MS.gene57770:CDS | 45.0% | |
| GCCAATAGAGGAAAGCTACT+GGG | + | chr8.4:3204227-3204246 | MS.gene57770:CDS | 45.0% | |
| GCTGATATGGTAAACACTGG+TGG | + | chr8.4:3204270-3204289 | MS.gene57770:CDS | 45.0% | |
| GGACTTGGATCAAAGAGGAT+TGG | + | chr8.4:3200645-3200664 | MS.gene57770:CDS | 45.0% | |
| GTAAAAGGAGAGGGTTGTGT+TGG | - | chr8.4:3201980-3201999 | None:intergenic | 45.0% | |
| GTGAACAACACTGATGCTGA+GGG | + | chr8.4:3203239-3203258 | MS.gene57770:CDS | 45.0% | |
| GTGGCTGATATGGTAAACAC+TGG | + | chr8.4:3204267-3204286 | MS.gene57770:CDS | 45.0% | |
| TACAACATCAAGACTGGACC+TGG | + | chr8.4:3202253-3202272 | MS.gene57770:CDS | 45.0% | |
| TCAAATCAAACCTCTTGGGG+TGG | + | chr8.4:3202348-3202367 | MS.gene57770:CDS | 45.0% | |
| TCCAAGTGATTGTGTGCCAT+TGG | + | chr8.4:3204472-3204491 | MS.gene57770:intron | 45.0% | |
| TCCAATGGCACACAATCACT+TGG | - | chr8.4:3204476-3204495 | None:intergenic | 45.0% | |
| TCCCAGTAGCTTTCCTCTAT+TGG | - | chr8.4:3204231-3204250 | None:intergenic | 45.0% | |
| TGATCAGTGGAACAGGTATG+AGG | + | chr8.4:3202685-3202704 | MS.gene57770:CDS | 45.0% | |
| TGCCAATAGAGGAAAGCTAC+TGG | + | chr8.4:3204226-3204245 | MS.gene57770:CDS | 45.0% | |
| TGGATCTGTAAAGGTCAAGC+TGG | + | chr8.4:3201618-3201637 | MS.gene57770:CDS | 45.0% | |
| TGGTTGCATATTGACATGGC+TGG | + | chr8.4:3204674-3204693 | MS.gene57770:CDS | 45.0% | |
| TTAGGGGATTCGATGTTGGT+GGG | - | chr8.4:3200244-3200263 | None:intergenic | 45.0% | |
| ! | AGCACTTGCTAGGCAAATCT+TGG | - | chr8.4:3203680-3203699 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCCCACTAAA+TGG | + | chr8.4:3201881-3201900 | MS.gene57770:intron | 45.0% |
| ! | TGCTGCTCTTTTCCTGAAAC+AGG | + | chr8.4:3204314-3204333 | MS.gene57770:CDS | 45.0% |
| ! | TGTAAAGGTCAAGCTGGCTT+TGG | + | chr8.4:3201624-3201643 | MS.gene57770:CDS | 45.0% |
| ! | TTTTGCAGCGCCTAAAACTG+CGG | - | chr8.4:3202320-3202339 | None:intergenic | 45.0% |
| !! | AAGCTGGCTTTGGTTGGAAA+AGG | + | chr8.4:3201634-3201653 | MS.gene57770:CDS | 45.0% |
| !! | AGGATTGGTTTGATCGGTCT+TGG | + | chr8.4:3200660-3200679 | MS.gene57770:CDS | 45.0% |
| !!! | CTTGGTGATGTTTTGGTCTC+AGG | + | chr8.4:3201424-3201443 | MS.gene57770:intron | 45.0% |
| !!! | TGGTGATGTTTTGGTCTCAG+GGG | + | chr8.4:3201426-3201445 | MS.gene57770:intron | 45.0% |
| AAAACGAGGAGGATTTGCCG+AGG | - | chr8.4:3201572-3201591 | None:intergenic | 50.0% | |
| AATCAAACCTCTTGGGGTGG+AGG | + | chr8.4:3202351-3202370 | MS.gene57770:CDS | 50.0% | |
| ACTAAATGGGTCCGGCTACA+TGG | + | chr8.4:3201895-3201914 | MS.gene57770:intron | 50.0% | |
| ACTATGGAGGCTGCCAATAG+AGG | + | chr8.4:3204215-3204234 | MS.gene57770:CDS | 50.0% | |
| AGGTGAGTGGGGAGAAACTA+TGG | + | chr8.4:3204199-3204218 | MS.gene57770:CDS | 50.0% | |
| ATGTAGCCGGACCCATTTAG+TGG | - | chr8.4:3201896-3201915 | None:intergenic | 50.0% | |
| CAAGGCTGGGTAAAAGGAGA+GGG | - | chr8.4:3201989-3202008 | None:intergenic | 50.0% | |
| CACCAACATCGAATCCCCTA+AGG | + | chr8.4:3200243-3200262 | MS.gene57770:CDS | 50.0% | |
| CCTGCTAATGTTCTCACACC+AGG | + | chr8.4:3201314-3201333 | MS.gene57770:CDS | 50.0% | |
| CCTGGTGTGAGAACATTAGC+AGG | - | chr8.4:3201317-3201336 | None:intergenic | 50.0% | |
| CGCTTCTTGTCATTCCACAC+AGG | - | chr8.4:3204701-3204720 | None:intergenic | 50.0% | |
| CGGACCCATTTAGTGGGATA+AGG | - | chr8.4:3201889-3201908 | None:intergenic | 50.0% | |
| CGTGGGCTTGAATTGTGCTA+GGG | + | chr8.4:3201120-3201139 | MS.gene57770:intron | 50.0% | |
| CTTAGGGGATTCGATGTTGG+TGG | - | chr8.4:3200245-3200264 | None:intergenic | 50.0% | |
| GAAGCTGTGACAACATCTCC+AGG | - | chr8.4:3202711-3202730 | None:intergenic | 50.0% | |
| GCGTTGCTACTCTAGTGGAA+TGG | + | chr8.4:3204738-3204757 | MS.gene57770:CDS | 50.0% | |
| GGGCATGTGTAGTTGCTCTT+GGG | + | chr8.4:3203868-3203887 | MS.gene57770:CDS | 50.0% | |
| GGTGAACAACACTGATGCTG+AGG | + | chr8.4:3203238-3203257 | MS.gene57770:intron | 50.0% | |
| GGTGGCTACAACATCAAGAC+TGG | + | chr8.4:3202247-3202266 | MS.gene57770:CDS | 50.0% | |
| GTAAACACTGGTGGTAGACC+AGG | + | chr8.4:3204279-3204298 | MS.gene57770:CDS | 50.0% | |
| GTGGGCTTGAATTGTGCTAG+GGG | + | chr8.4:3201121-3201140 | MS.gene57770:intron | 50.0% | |
| TAGGGGATTCGATGTTGGTG+GGG | - | chr8.4:3200243-3200262 | None:intergenic | 50.0% | |
| TCTTGGAACGGGACCTGAAT+TGG | + | chr8.4:3201223-3201242 | MS.gene57770:CDS | 50.0% | |
| TGAGTGGGGAGAAACTATGG+AGG | + | chr8.4:3204202-3204221 | MS.gene57770:CDS | 50.0% | |
| TGTAGCCGGACCCATTTAGT+GGG | - | chr8.4:3201895-3201914 | None:intergenic | 50.0% | |
| ! | CTCTCCTTTTACCCAGCCTT+GGG | + | chr8.4:3201988-3202007 | MS.gene57770:intron | 50.0% |
| !! | AAGGTCAAGCTGGCTTTGGT+TGG | + | chr8.4:3201628-3201647 | MS.gene57770:CDS | 50.0% |
| !! | GTTGGCAGAAGAGGCATCTA+AGG | + | chr8.4:3201450-3201469 | MS.gene57770:CDS | 50.0% |
| !! | TGCCTAGCAAGTGCTGACTT+TGG | + | chr8.4:3203685-3203704 | MS.gene57770:intron | 50.0% |
| !! | TGGAAGCTTCTGAGGTGAGT+GGG | + | chr8.4:3204187-3204206 | MS.gene57770:CDS | 50.0% |
| !! | TTAGGCGCTGCAAAAGCACT+TGG | + | chr8.4:3202325-3202344 | MS.gene57770:CDS | 50.0% |
| !! | TTGGAAGCTTCTGAGGTGAG+TGG | + | chr8.4:3204186-3204205 | MS.gene57770:CDS | 50.0% |
| !!! | TGTTTTGGTCTCAGGGGTGT+TGG | + | chr8.4:3201432-3201451 | MS.gene57770:intron | 50.0% |
| AACACTGGTGGTAGACCAGG+TGG | + | chr8.4:3204282-3204301 | MS.gene57770:CDS | 55.0% | |
| AAGCGCTCAGCGACAGGATT+TGG | + | chr8.4:3204716-3204735 | MS.gene57770:CDS | 55.0% | |
| AATTGTGCTAGGGGCTGTGC+TGG | + | chr8.4:3201130-3201149 | MS.gene57770:intron | 55.0% | |
| ACTCACACTGGCAGATGCTC+TGG | + | chr8.4:3203265-3203284 | MS.gene57770:CDS | 55.0% | |
| AGTGGAACAGGTATGAGGCC+TGG | + | chr8.4:3202690-3202709 | MS.gene57770:CDS | 55.0% | |
| ATTGTGCTAGGGGCTGTGCT+GGG | + | chr8.4:3201131-3201150 | MS.gene57770:intron | 55.0% | |
| CAGTCACGTGACACCACTCT+CGG | + | chr8.4:3200208-3200227 | MS.gene57770:CDS | 55.0% | |
| CAGTCCCAAGGCTGGGTAAA+AGG | - | chr8.4:3201995-3202014 | None:intergenic | 55.0% | |
| CCAAGGCTGGGTAAAAGGAG+AGG | - | chr8.4:3201990-3202009 | None:intergenic | 55.0% | |
| GCAGCAGTGATAGAACCACC+TGG | - | chr8.4:3204300-3204319 | None:intergenic | 55.0% | |
| GCGTGGGCTTGAATTGTGCT+AGG | + | chr8.4:3201119-3201138 | MS.gene57770:intron | 55.0% | |
| GGCCAAAGTCAGCACTTGCT+AGG | - | chr8.4:3203690-3203709 | None:intergenic | 55.0% | |
| GGCTGCAGCAACACCTAGAT+AGG | - | chr8.4:3201551-3201570 | None:intergenic | 55.0% | |
| GGGGCATGTGTAGTTGCTCT+TGG | + | chr8.4:3203867-3203886 | MS.gene57770:CDS | 55.0% | |
| GTCAAGCATAGCCAGTCCCA+AGG | - | chr8.4:3202007-3202026 | None:intergenic | 55.0% | |
| TGACTAACCTCCACCCCAAG+AGG | - | chr8.4:3202361-3202380 | None:intergenic | 55.0% | |
| TGCTGAGGGAAGACTCACAC+TGG | + | chr8.4:3203253-3203272 | MS.gene57770:CDS | 55.0% | |
| ! | CCTCTCCTTTTACCCAGCCT+TGG | + | chr8.4:3201987-3202006 | MS.gene57770:intron | 55.0% |
| ! | CTTTTACCCAGCCTTGGGAC+TGG | + | chr8.4:3201993-3202012 | MS.gene57770:intron | 55.0% |
| ! | GGTGGTTCAGCCGCAGTTTT+AGG | + | chr8.4:3202307-3202326 | MS.gene57770:CDS | 55.0% |
| ! | TTGACATGGCTGGTCCTGTG+TGG | + | chr8.4:3204684-3204703 | MS.gene57770:CDS | 55.0% |
| !! | GGAAGCTTCTGAGGTGAGTG+GGG | + | chr8.4:3204188-3204207 | MS.gene57770:CDS | 55.0% |
| !! | GGGACTGGCTATGCTTGACA+AGG | + | chr8.4:3202008-3202027 | MS.gene57770:intron | 55.0% |
| !! | TCTAGGTGTTGCTGCAGCCT+CGG | + | chr8.4:3201552-3201571 | MS.gene57770:CDS | 55.0% |
| !!! | TTCTGGTGGCTGCTTTTCCG+TGG | + | chr8.4:3202571-3202590 | MS.gene57770:intron | 55.0% |
| AGCATAGCCAGTCCCAAGGC+TGG | - | chr8.4:3202003-3202022 | None:intergenic | 60.0% | |
| CGCAGCTGCTAAGTCTGCTC+AGG | + | chr8.4:3200734-3200753 | MS.gene57770:CDS | 60.0% | |
| GCATAGCCAGTCCCAAGGCT+GGG | - | chr8.4:3202002-3202021 | None:intergenic | 60.0% | |
| GCTCTTGGGCCCTCAATTGC+AGG | + | chr8.4:3203882-3203901 | MS.gene57770:CDS | 60.0% | |
| ! | CGATGTTGGTGGGGTGAGTG+AGG | - | chr8.4:3200234-3200253 | None:intergenic | 60.0% |
| ! | CTGTGTTGGGTACCGTGGAG+TGG | + | chr8.4:3204403-3204422 | MS.gene57770:intron | 60.0% |
| ! | GACAGCTGTGTTGGGTACCG+TGG | + | chr8.4:3204398-3204417 | MS.gene57770:intron | 60.0% |
| !! | CTCAGGGGTGTTGGCAGAAG+AGG | + | chr8.4:3201441-3201460 | MS.gene57770:intron | 60.0% |
| !! | GACAAGAAGCGCTCAGCGAC+AGG | + | chr8.4:3204710-3204729 | MS.gene57770:CDS | 60.0% |
| GGGGTGAGTGAGGCCGAGAG+TGG | - | chr8.4:3200224-3200243 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3200076 | 3204781 | 3200076 | ID=MS.gene57770 |
| chr8.4 | mRNA | 3200076 | 3204781 | 3200076 | ID=MS.gene57770.t1;Parent=MS.gene57770 |
| chr8.4 | exon | 3200076 | 3200264 | 3200076 | ID=MS.gene57770.t1.exon1;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3200076 | 3200264 | 3200076 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3200426 | 3200840 | 3200426 | ID=MS.gene57770.t1.exon2;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3200426 | 3200840 | 3200426 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3201141 | 3201335 | 3201141 | ID=MS.gene57770.t1.exon3;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3201141 | 3201335 | 3201141 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3201446 | 3201671 | 3201446 | ID=MS.gene57770.t1.exon4;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3201446 | 3201671 | 3201446 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3202246 | 3202372 | 3202246 | ID=MS.gene57770.t1.exon5;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3202246 | 3202372 | 3202246 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3202654 | 3202749 | 3202654 | ID=MS.gene57770.t1.exon6;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3202654 | 3202749 | 3202654 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3203239 | 3203316 | 3203239 | ID=MS.gene57770.t1.exon7;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3203239 | 3203316 | 3203239 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3203843 | 3203903 | 3203843 | ID=MS.gene57770.t1.exon8;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3203843 | 3203903 | 3203843 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3204148 | 3204335 | 3204148 | ID=MS.gene57770.t1.exon9;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3204148 | 3204335 | 3204148 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| chr8.4 | exon | 3204653 | 3204781 | 3204653 | ID=MS.gene57770.t1.exon10;Parent=MS.gene57770.t1 |
| chr8.4 | CDS | 3204653 | 3204781 | 3204653 | ID=cds.MS.gene57770.t1;Parent=MS.gene57770.t1 |
| Gene Sequence |
| Protein sequence |
