Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57802.t1 | PNY05956.1 | 78 | 508 | 110 | 2 | 1 | 508 | 724 | 1229 | 3.80E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57802.t1 | A0A2K3NSE5 | 78.0 | 508 | 110 | 2 | 1 | 508 | 724 | 1229 | 2.7e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05248 | MS.gene57802 | 0.815619 | 8.43E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57802.t1 | MTR_3g012470 | 40.678 | 236 | 137 | 2 | 272 | 504 | 1156 | 1391 | 7.43e-43 | 164 |
| MS.gene57802.t1 | MTR_3g012470 | 34.783 | 138 | 76 | 4 | 8 | 133 | 904 | 1039 | 1.25e-12 | 71.2 |
| MS.gene57802.t1 | MTR_6g078420 | 37.198 | 207 | 127 | 2 | 233 | 436 | 1194 | 1400 | 1.04e-29 | 124 |
| MS.gene57802.t1 | MTR_3g012470 | 34.783 | 138 | 76 | 4 | 8 | 133 | 904 | 1039 | 2.80e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTACTTCCTTTCAGTTTC+TGG | 0.099802 | 6.1:-69432396 | MS.gene57802:CDS |
| GCATCTTGCCTGAGAATTTA+AGG | 0.141317 | 6.1:-69432074 | MS.gene57802:CDS |
| CAGAATTTCCAAGGCTTTCT+TGG | 0.181579 | 6.1:+69430846 | None:intergenic |
| TCACATTCATGCAGTTTAAT+TGG | 0.185572 | 6.1:+69431842 | None:intergenic |
| AGCTATATGGTGATAGAATT+TGG | 0.209577 | 6.1:-69431885 | MS.gene57802:CDS |
| GGGAAGCCAACTAGTTTATT+TGG | 0.226997 | 6.1:-69430527 | MS.gene57802:CDS |
| TACAAGTGATGATTCAAAAT+TGG | 0.249810 | 6.1:-69430893 | MS.gene57802:CDS |
| CTTGTGCACAATGTCAAATT+TGG | 0.257329 | 6.1:+69432198 | None:intergenic |
| GAGAAATTCTTGGGAACTTA+TGG | 0.268693 | 6.1:+69432514 | None:intergenic |
| TCAGAAATGCCTGAAGTTAA+TGG | 0.307766 | 6.1:-69431997 | MS.gene57802:CDS |
| CAGTTTCTGGTGATCTTGTA+TGG | 0.320226 | 6.1:-69432383 | MS.gene57802:CDS |
| GAACTAGGAAATAAAAGAAT+TGG | 0.326392 | 6.1:-69432477 | MS.gene57802:CDS |
| ATTTGTTCATCTGATATTTC+AGG | 0.331132 | 6.1:+69432048 | None:intergenic |
| TTGTGGAGTTCATGAGTATA+AGG | 0.333715 | 6.1:-69432241 | MS.gene57802:CDS |
| GAAGTTCAGATATCTATTAA+TGG | 0.340004 | 6.1:-69432441 | MS.gene57802:CDS |
| TGCATGAATGTGAAGAATAA+AGG | 0.378043 | 6.1:-69431832 | MS.gene57802:intron |
| TTGACACAAATTCTTTGAAC+TGG | 0.396527 | 6.1:+69430563 | None:intergenic |
| TGGATCCTCCTTTGCTGCTA+TGG | 0.402704 | 6.1:+69432553 | None:intergenic |
| ATGAAGCATAGAGAAATTCT+TGG | 0.403478 | 6.1:+69432504 | None:intergenic |
| GCTATATGGTGATAGAATTT+GGG | 0.406693 | 6.1:-69431884 | MS.gene57802:CDS |
| TTTCTTCCAAATAAACTAGT+TGG | 0.410595 | 6.1:+69430521 | None:intergenic |
| TCATTAGATATGCAGCTATA+TGG | 0.416306 | 6.1:-69431898 | MS.gene57802:CDS |
| TTTGCCGAGTCATCAAGAAT+TGG | 0.421448 | 6.1:-69430998 | MS.gene57802:CDS |
| AAGGAAGTACTGTTCTCTAT+TGG | 0.424478 | 6.1:+69432407 | None:intergenic |
| TCAGGCAGCCTTAAATTCTC+AGG | 0.433284 | 6.1:+69432066 | None:intergenic |
| AATTGGCATTCTAATAGCAT+TGG | 0.442766 | 6.1:+69431859 | None:intergenic |
| ATGTCATTCTGAAGATAACT+TGG | 0.456310 | 6.1:-69432109 | MS.gene57802:CDS |
| GTGTCAATAGAGAGTGAGTT+GGG | 0.459553 | 6.1:-69430547 | MS.gene57802:CDS |
| TCCTTGTAATAATGAATACT+TGG | 0.471344 | 6.1:-69432169 | MS.gene57802:CDS |
| CTCGTCCTCAACGTATCCTT+TGG | 0.472095 | 6.1:+69430309 | None:intergenic |
| AGGAGGATCCATGTCATTCT+CGG | 0.483498 | 6.1:-69432541 | MS.gene57802:CDS |
| GGCTCCAATTCTTGATGACT+CGG | 0.489421 | 6.1:+69430994 | None:intergenic |
| TTCATGGATGTTGATGATGT+TGG | 0.501106 | 6.1:+69430784 | None:intergenic |
| TGAAGCATAGAGAAATTCTT+GGG | 0.502712 | 6.1:+69432505 | None:intergenic |
| GTCATACAACCATTAACTTC+AGG | 0.505828 | 6.1:+69431988 | None:intergenic |
| GTATCAGCAAGAAAACTTGA+TGG | 0.507216 | 6.1:-69432358 | MS.gene57802:CDS |
| GTTGAGAGCGGAGCAAGAAT+CGG | 0.514851 | 6.1:-69430341 | MS.gene57802:CDS |
| AAAAGAGAAACATTTGAAGC+AGG | 0.515322 | 6.1:-69430412 | MS.gene57802:CDS |
| AATAGATATCTGAACTTCAC+AGG | 0.515847 | 6.1:+69432446 | None:intergenic |
| GATGACACATTTGTTTAGAG+AGG | 0.519007 | 6.1:+69430815 | None:intergenic |
| TGTCAATCACTGCAGTGGCT+AGG | 0.521011 | 6.1:-69430453 | MS.gene57802:CDS |
| GTCAATCACTGCAGTGGCTA+GGG | 0.524146 | 6.1:-69430452 | MS.gene57802:CDS |
| ACTGTATGAACAGAATTATG+TGG | 0.531472 | 6.1:-69432319 | MS.gene57802:CDS |
| TCCAAGTATTCATTATTACA+AGG | 0.531821 | 6.1:+69432168 | None:intergenic |
| TGAAGAAACCAAGAAAGCCT+TGG | 0.537656 | 6.1:-69430854 | MS.gene57802:CDS |
| GAGTTCTTTCAGAATTTCCA+AGG | 0.547092 | 6.1:+69430837 | None:intergenic |
| CTATGGTAGTTGAACTTGAA+AGG | 0.550415 | 6.1:+69432570 | None:intergenic |
| TTCAACTACCATAGCAGCAA+AGG | 0.555751 | 6.1:-69432561 | MS.gene57802:CDS |
| TGTGTCAATAGAGAGTGAGT+TGG | 0.565145 | 6.1:-69430548 | MS.gene57802:CDS |
| GAGATGAGTTGAGGAAGCAA+AGG | 0.566326 | 6.1:-69430369 | MS.gene57802:CDS |
| CGTTGAGGACGAGTGGTCAA+AGG | 0.583748 | 6.1:-69430299 | MS.gene57802:CDS |
| CAAGATCACCAGAAACTGAA+AGG | 0.590671 | 6.1:+69432388 | None:intergenic |
| AAGCTCAAAGAGATGAGTTG+AGG | 0.595628 | 6.1:-69430378 | MS.gene57802:CDS |
| AGCGGAGCAAGAATCGGCTA+AGG | 0.595913 | 6.1:-69430335 | MS.gene57802:CDS |
| TAGTTGAACTTGAAAGGCAT+CGG | 0.600165 | 6.1:+69432576 | None:intergenic |
| AACTACCATAGCAGCAAAGG+AGG | 0.602659 | 6.1:-69432558 | MS.gene57802:CDS |
| GGATCCATGTCATTCTCGGT+TGG | 0.606450 | 6.1:-69432537 | MS.gene57802:CDS |
| ATGAAGCATATGTCTCAGCA+TGG | 0.619026 | 6.1:+69430923 | None:intergenic |
| GAAATTATAGATGCGAGTGA+AGG | 0.619799 | 6.1:-69432285 | MS.gene57802:CDS |
| TGTCATTCTGAAGATAACTT+GGG | 0.620604 | 6.1:-69432108 | MS.gene57802:CDS |
| AGCATATGTCTCAGCATGGA+GGG | 0.627120 | 6.1:+69430927 | None:intergenic |
| GCAAAGGCTGTGGTTGAGAG+CGG | 0.633300 | 6.1:-69430353 | MS.gene57802:CDS |
| ATGGCCAACCGAGAATGACA+TGG | 0.635068 | 6.1:+69432533 | None:intergenic |
| TCATCAAGAATTGGAGCCAG+AGG | 0.639454 | 6.1:-69430989 | MS.gene57802:CDS |
| GAATCGGCTAAGGCTACCAA+AGG | 0.640074 | 6.1:-69430325 | MS.gene57802:CDS |
| GAACATGTCAATCACTGCAG+TGG | 0.650335 | 6.1:-69430458 | MS.gene57802:CDS |
| AAGGATACGTTGAGGACGAG+TGG | 0.661142 | 6.1:-69430306 | MS.gene57802:CDS |
| TCATGAGTATAAGGAAGATG+CGG | 0.667256 | 6.1:-69432232 | MS.gene57802:CDS |
| AGTTGAGGAAGCAAAGGCTG+TGG | 0.673924 | 6.1:-69430363 | MS.gene57802:CDS |
| AAGCATATGTCTCAGCATGG+AGG | 0.675214 | 6.1:+69430926 | None:intergenic |
| CAGATGATGATGTTTCGATG+AGG | 0.720059 | 6.1:-69430729 | MS.gene57802:CDS |
| GGCTACCAAAGGATACGTTG+AGG | 0.733809 | 6.1:-69430314 | MS.gene57802:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATCAAAATTATCATAAAA+TGG | - | chr6.1:69431630-69431649 | MS.gene57802:intron | 15.0% |
| !! | TAGATTAATGACAAAATCTT+TGG | - | chr6.1:69431279-69431298 | MS.gene57802:intron | 20.0% |
| !!! | TAATGAATCGTTTTATAGTA+AGG | - | chr6.1:69431302-69431321 | MS.gene57802:intron | 20.0% |
| !!! | TCTCTCAATTTTTAATATGT+TGG | - | chr6.1:69431516-69431535 | MS.gene57802:intron | 20.0% |
| ! | AAGTGAAACAAAAGATAGTA+AGG | + | chr6.1:69431076-69431095 | None:intergenic | 25.0% |
| ! | AGTGAAACAAAAGATAGTAA+GGG | + | chr6.1:69431075-69431094 | None:intergenic | 25.0% |
| ! | ATTATTGATCAAAAACCAGA+GGG | - | chr6.1:69431569-69431588 | MS.gene57802:intron | 25.0% |
| ! | ATTTGTTCATCTGATATTTC+AGG | + | chr6.1:69430786-69430805 | None:intergenic | 25.0% |
| ! | CACAAAATTCACAACAAATT+TGG | - | chr6.1:69431170-69431189 | MS.gene57802:intron | 25.0% |
| ! | GAACTAGGAAATAAAAGAAT+TGG | - | chr6.1:69430354-69430373 | MS.gene57802:CDS | 25.0% |
| ! | GAAGTTCAGATATCTATTAA+TGG | - | chr6.1:69430390-69430409 | MS.gene57802:CDS | 25.0% |
| ! | TACAAGTGATGATTCAAAAT+TGG | - | chr6.1:69431938-69431957 | MS.gene57802:CDS | 25.0% |
| ! | TATTATTGATCAAAAACCAG+AGG | - | chr6.1:69431568-69431587 | MS.gene57802:intron | 25.0% |
| ! | TCAAAATCAAATCAACCAAA+TGG | + | chr6.1:69431447-69431466 | None:intergenic | 25.0% |
| ! | TCCAAGTATTCATTATTACA+AGG | + | chr6.1:69430666-69430685 | None:intergenic | 25.0% |
| ! | TCCTTGTAATAATGAATACT+TGG | - | chr6.1:69430662-69430681 | MS.gene57802:CDS | 25.0% |
| ! | TGGTTAGTAAAAAAGAAGAT+TGG | + | chr6.1:69431427-69431446 | None:intergenic | 25.0% |
| ! | TTTCTTCCAAATAAACTAGT+TGG | + | chr6.1:69432313-69432332 | None:intergenic | 25.0% |
| !! | ATATTGCAAAGTAGTTTTCA+TGG | + | chr6.1:69432066-69432085 | None:intergenic | 25.0% |
| !! | GGATAACATACAATTTTCAA+GGG | - | chr6.1:69430683-69430702 | MS.gene57802:CDS | 25.0% |
| !! | TGGATAACATACAATTTTCA+AGG | - | chr6.1:69430682-69430701 | MS.gene57802:CDS | 25.0% |
| !!! | AGATTTTAGTAGAAATCAAC+TGG | + | chr6.1:69431384-69431403 | None:intergenic | 25.0% |
| !!! | CTTCTTTTTTACTAACCATT+TGG | - | chr6.1:69431429-69431448 | MS.gene57802:intron | 25.0% |
| !!! | TTTGGTTGATTTGATTTTGA+TGG | - | chr6.1:69431447-69431466 | MS.gene57802:intron | 25.0% |
| AAAGCTACAAAAACTTGAAG+AGG | - | chr6.1:69432226-69432245 | MS.gene57802:CDS | 30.0% | |
| AAGCTACAAAAACTTGAAGA+GGG | - | chr6.1:69432227-69432246 | MS.gene57802:CDS | 30.0% | |
| AATAGATATCTGAACTTCAC+AGG | + | chr6.1:69430388-69430407 | None:intergenic | 30.0% | |
| AATTGGCATTCTAATAGCAT+TGG | + | chr6.1:69430975-69430994 | None:intergenic | 30.0% | |
| ACTGTATGAACAGAATTATG+TGG | - | chr6.1:69430512-69430531 | MS.gene57802:CDS | 30.0% | |
| AGCTATATGGTGATAGAATT+TGG | - | chr6.1:69430946-69430965 | MS.gene57802:CDS | 30.0% | |
| ATGAAGCATAGAGAAATTCT+TGG | + | chr6.1:69430330-69430349 | None:intergenic | 30.0% | |
| CATATGTTGATCATCTAATC+TGG | + | chr6.1:69431774-69431793 | None:intergenic | 30.0% | |
| GCTATATGGTGATAGAATTT+GGG | - | chr6.1:69430947-69430966 | MS.gene57802:CDS | 30.0% | |
| TCACATTCATGCAGTTTAAT+TGG | + | chr6.1:69430992-69431011 | None:intergenic | 30.0% | |
| TCATTAGATATGCAGCTATA+TGG | - | chr6.1:69430933-69430952 | MS.gene57802:CDS | 30.0% | |
| TCTGTTTAACGTTCAGTATA+TGG | - | chr6.1:69431659-69431678 | MS.gene57802:intron | 30.0% | |
| TGAAGCATAGAGAAATTCTT+GGG | + | chr6.1:69430329-69430348 | None:intergenic | 30.0% | |
| TGCATGAATGTGAAGAATAA+AGG | - | chr6.1:69430999-69431018 | MS.gene57802:CDS | 30.0% | |
| TTGACACAAATTCTTTGAAC+TGG | + | chr6.1:69432271-69432290 | None:intergenic | 30.0% | |
| TTTCTACTAAAATCTGATGC+TGG | - | chr6.1:69431389-69431408 | MS.gene57802:intron | 30.0% | |
| ! | AAAAGAGAAACATTTGAAGC+AGG | - | chr6.1:69432419-69432438 | MS.gene57802:CDS | 30.0% |
| ! | ATGTCATTCTGAAGATAACT+TGG | - | chr6.1:69430722-69430741 | MS.gene57802:CDS | 30.0% |
| ! | GATGTAACAATATGCTTTTG+TGG | - | chr6.1:69430573-69430592 | MS.gene57802:CDS | 30.0% |
| ! | TGTCATTCTGAAGATAACTT+GGG | - | chr6.1:69430723-69430742 | MS.gene57802:CDS | 30.0% |
| !! | CTATGCTTCATTTTTGAACT+AGG | - | chr6.1:69430339-69430358 | MS.gene57802:CDS | 30.0% |
| !!! | TGATTTGATTTTGATGGTGT+TGG | - | chr6.1:69431453-69431472 | MS.gene57802:intron | 30.0% |
| AAAATCTAGGTAGGCTTGTA+GGG | + | chr6.1:69431099-69431118 | None:intergenic | 35.0% | |
| AACAGCATACACAGTATTCA+AGG | + | chr6.1:69431347-69431366 | None:intergenic | 35.0% | |
| AGTGCAGTTCAAGAAAATCT+AGG | + | chr6.1:69431112-69431131 | None:intergenic | 35.0% | |
| CAGTTCAAGAAAATCTAGGT+AGG | + | chr6.1:69431108-69431127 | None:intergenic | 35.0% | |
| CTATGGTAGTTGAACTTGAA+AGG | + | chr6.1:69430264-69430283 | None:intergenic | 35.0% | |
| CTTGTGCACAATGTCAAATT+TGG | + | chr6.1:69430636-69430655 | None:intergenic | 35.0% | |
| GAAATTATAGATGCGAGTGA+AGG | - | chr6.1:69430546-69430565 | MS.gene57802:CDS | 35.0% | |
| GAGAAATTCTTGGGAACTTA+TGG | + | chr6.1:69430320-69430339 | None:intergenic | 35.0% | |
| GAGTTCTTTCAGAATTTCCA+AGG | + | chr6.1:69431997-69432016 | None:intergenic | 35.0% | |
| GATGACACATTTGTTTAGAG+AGG | + | chr6.1:69432019-69432038 | None:intergenic | 35.0% | |
| GTATCAGCAAGAAAACTTGA+TGG | - | chr6.1:69430473-69430492 | MS.gene57802:CDS | 35.0% | |
| GTCATACAACCATTAACTTC+AGG | + | chr6.1:69430846-69430865 | None:intergenic | 35.0% | |
| TCAGAAATGCCTGAAGTTAA+TGG | - | chr6.1:69430834-69430853 | MS.gene57802:CDS | 35.0% | |
| TCATCACTAAAAAGTTCCTC+TGG | + | chr6.1:69431861-69431880 | None:intergenic | 35.0% | |
| TCATGAGTATAAGGAAGATG+CGG | - | chr6.1:69430599-69430618 | MS.gene57802:CDS | 35.0% | |
| TGTTGATCATCTAATCTGGA+TGG | + | chr6.1:69431770-69431789 | None:intergenic | 35.0% | |
| TTGTCTGCAGGAAGAAATTT+AGG | + | chr6.1:69431810-69431829 | None:intergenic | 35.0% | |
| TTGTGGAGTTCATGAGTATA+AGG | - | chr6.1:69430590-69430609 | MS.gene57802:CDS | 35.0% | |
| !! | AAGGAAGTACTGTTCTCTAT+TGG | + | chr6.1:69430427-69430446 | None:intergenic | 35.0% |
| !! | TTCATGGATGTTGATGATGT+TGG | + | chr6.1:69432050-69432069 | None:intergenic | 35.0% |
| !! | TTTTAGCTGACTTTACTCAG+TGG | - | chr6.1:69432147-69432166 | MS.gene57802:CDS | 35.0% |
| AAGCTCAAAGAGATGAGTTG+AGG | - | chr6.1:69432453-69432472 | MS.gene57802:CDS | 40.0% | |
| ATGAAGCATATGTCTCAGCA+TGG | + | chr6.1:69431911-69431930 | None:intergenic | 40.0% | |
| CAAGATCACCAGAAACTGAA+AGG | + | chr6.1:69430446-69430465 | None:intergenic | 40.0% | |
| CAGAATTTCCAAGGCTTTCT+TGG | + | chr6.1:69431988-69432007 | None:intergenic | 40.0% | |
| CAGTACTTCCTTTCAGTTTC+TGG | - | chr6.1:69430435-69430454 | MS.gene57802:CDS | 40.0% | |
| GAAAATCTAGGTAGGCTTGT+AGG | + | chr6.1:69431100-69431119 | None:intergenic | 40.0% | |
| GCATCTTGCCTGAGAATTTA+AGG | - | chr6.1:69430757-69430776 | MS.gene57802:CDS | 40.0% | |
| GTGTCAATAGAGAGTGAGTT+GGG | - | chr6.1:69432284-69432303 | MS.gene57802:CDS | 40.0% | |
| TGAAGAAACCAAGAAAGCCT+TGG | - | chr6.1:69431977-69431996 | MS.gene57802:CDS | 40.0% | |
| TGTGTCAATAGAGAGTGAGT+TGG | - | chr6.1:69432283-69432302 | MS.gene57802:CDS | 40.0% | |
| TTCAACTACCATAGCAGCAA+AGG | - | chr6.1:69430270-69430289 | MS.gene57802:CDS | 40.0% | |
| TTTGCCGAGTCATCAAGAAT+TGG | - | chr6.1:69431833-69431852 | MS.gene57802:CDS | 40.0% | |
| ! | ATCTCTCTTCTTTTTCCCTC+TGG | + | chr6.1:69431587-69431606 | None:intergenic | 40.0% |
| ! | CAGATGATGATGTTTCGATG+AGG | - | chr6.1:69432102-69432121 | MS.gene57802:CDS | 40.0% |
| ! | GGGAAGCCAACTAGTTTATT+TGG | - | chr6.1:69432304-69432323 | MS.gene57802:CDS | 40.0% |
| !! | CAGTTTCTGGTGATCTTGTA+TGG | - | chr6.1:69430448-69430467 | MS.gene57802:CDS | 40.0% |
| !!! | GAGACTTTGAAGTGTGCTTT+TGG | - | chr6.1:69431479-69431498 | MS.gene57802:intron | 40.0% |
| AACTACCATAGCAGCAAAGG+AGG | - | chr6.1:69430273-69430292 | MS.gene57802:CDS | 45.0% | |
| AAGCATATGTCTCAGCATGG+AGG | + | chr6.1:69431908-69431927 | None:intergenic | 45.0% | |
| AGCATATGTCTCAGCATGGA+GGG | + | chr6.1:69431907-69431926 | None:intergenic | 45.0% | |
| AGGAGGATCCATGTCATTCT+CGG | - | chr6.1:69430290-69430309 | MS.gene57802:CDS | 45.0% | |
| GAACATGTCAATCACTGCAG+TGG | - | chr6.1:69432373-69432392 | MS.gene57802:CDS | 45.0% | |
| TCAGGCAGCCTTAAATTCTC+AGG | + | chr6.1:69430768-69430787 | None:intergenic | 45.0% | |
| TCATCAAGAATTGGAGCCAG+AGG | - | chr6.1:69431842-69431861 | MS.gene57802:CDS | 45.0% | |
| ! | GAGATGAGTTGAGGAAGCAA+AGG | - | chr6.1:69432462-69432481 | MS.gene57802:CDS | 45.0% |
| ! | GGCTCCAATTCTTGATGACT+CGG | + | chr6.1:69431840-69431859 | None:intergenic | 45.0% |
| AAGGATACGTTGAGGACGAG+TGG | - | chr6.1:69432525-69432544 | MS.gene57802:CDS | 50.0% | |
| AGTTGAGGAAGCAAAGGCTG+TGG | - | chr6.1:69432468-69432487 | MS.gene57802:CDS | 50.0% | |
| ATGGCCAACCGAGAATGACA+TGG | + | chr6.1:69430301-69430320 | None:intergenic | 50.0% | |
| CTCGGCAAAATGTTGTCTGC+AGG | + | chr6.1:69431822-69431841 | None:intergenic | 50.0% | |
| CTCGTCCTCAACGTATCCTT+TGG | + | chr6.1:69432525-69432544 | None:intergenic | 50.0% | |
| GAATCGGCTAAGGCTACCAA+AGG | - | chr6.1:69432506-69432525 | MS.gene57802:CDS | 50.0% | |
| GGATCCATGTCATTCTCGGT+TGG | - | chr6.1:69430294-69430313 | MS.gene57802:CDS | 50.0% | |
| GGCTACCAAAGGATACGTTG+AGG | - | chr6.1:69432517-69432536 | MS.gene57802:CDS | 50.0% | |
| GTCAATCACTGCAGTGGCTA+GGG | - | chr6.1:69432379-69432398 | MS.gene57802:CDS | 50.0% | |
| GTTGAGAGCGGAGCAAGAAT+CGG | - | chr6.1:69432490-69432509 | MS.gene57802:CDS | 50.0% | |
| TGGATCCTCCTTTGCTGCTA+TGG | + | chr6.1:69430281-69430300 | None:intergenic | 50.0% | |
| TGTCAATCACTGCAGTGGCT+AGG | - | chr6.1:69432378-69432397 | MS.gene57802:CDS | 50.0% | |
| AGCGGAGCAAGAATCGGCTA+AGG | - | chr6.1:69432496-69432515 | MS.gene57802:CDS | 55.0% | |
| CGTTGAGGACGAGTGGTCAA+AGG | - | chr6.1:69432532-69432551 | MS.gene57802:CDS | 55.0% | |
| GCAAAGGCTGTGGTTGAGAG+CGG | - | chr6.1:69432478-69432497 | MS.gene57802:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 69430258 | 69432595 | 69430258 | ID=MS.gene57802 |
| chr6.1 | mRNA | 69430258 | 69432595 | 69430258 | ID=MS.gene57802.t1;Parent=MS.gene57802 |
| chr6.1 | exon | 69431833 | 69432595 | 69431833 | ID=MS.gene57802.t1.exon1;Parent=MS.gene57802.t1 |
| chr6.1 | CDS | 69431833 | 69432595 | 69431833 | ID=cds.MS.gene57802.t1;Parent=MS.gene57802.t1 |
| chr6.1 | exon | 69430258 | 69431027 | 69430258 | ID=MS.gene57802.t1.exon2;Parent=MS.gene57802.t1 |
| chr6.1 | CDS | 69430258 | 69431027 | 69430258 | ID=cds.MS.gene57802.t1;Parent=MS.gene57802.t1 |
| Gene Sequence |
| Protein sequence |