Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57896.t1 | XP_003610319.1 | 98.6 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 5.20E-308 | 1066.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57896.t1 | Q42876 | 74.0 | 565 | 134 | 4 | 13 | 567 | 7 | 568 | 5.0e-235 | 815.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57896.t1 | G7JGP9 | 98.6 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 3.7e-308 | 1066.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050630 | MS.gene57896 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene57896 | 0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene055891 | MS.gene57896 | 0.831144 | 1.97E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57896.t1 | MTR_4g130860 | 98.589 | 567 | 8 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1127 |
| MS.gene57896.t1 | MTR_2g460740 | 86.087 | 230 | 32 | 0 | 338 | 567 | 17 | 246 | 4.49e-150 | 431 |
| MS.gene57896.t1 | MTR_2g460760 | 66.567 | 335 | 96 | 7 | 20 | 341 | 26 | 357 | 5.83e-137 | 402 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57896.t1 | AT2G24200 | 78.571 | 518 | 109 | 1 | 50 | 567 | 4 | 519 | 0.0 | 844 |
| MS.gene57896.t1 | AT2G24200 | 78.571 | 518 | 109 | 1 | 50 | 567 | 4 | 519 | 0.0 | 844 |
| MS.gene57896.t1 | AT4G30920 | 75.413 | 545 | 132 | 2 | 24 | 567 | 39 | 582 | 0.0 | 827 |
| MS.gene57896.t1 | AT4G30910 | 72.578 | 547 | 148 | 2 | 22 | 567 | 36 | 581 | 0.0 | 784 |
| MS.gene57896.t1 | AT4G30910 | 69.649 | 570 | 148 | 3 | 22 | 567 | 36 | 604 | 0.0 | 771 |
| MS.gene57896.t1 | AT2G24200 | 72.973 | 518 | 102 | 2 | 50 | 567 | 4 | 483 | 0.0 | 767 |
| MS.gene57896.t1 | AT5G13940 | 72.549 | 51 | 14 | 0 | 278 | 328 | 66 | 116 | 2.55e-16 | 83.2 |
Find 136 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAGATCCATTGACATTAT+TGG | 0.185386 | 8.4:+3119085 | MS.gene57896:CDS |
| TTCAACTACTGCACTGTATA+AGG | 0.215864 | 8.4:+3118577 | MS.gene57896:CDS |
| TCAACCGTTGTTAGGATTAA+AGG | 0.216149 | 8.4:+3118509 | MS.gene57896:CDS |
| ATTAAGCACGCACCTGTTTC+AGG | 0.219303 | 8.4:-3122211 | None:intergenic |
| ATTGATTTGGCAACCTTAAC+TGG | 0.220073 | 8.4:+3121731 | MS.gene57896:CDS |
| TGAACTCATGAAATTTGATA+TGG | 0.264305 | 8.4:+3120170 | MS.gene57896:CDS |
| TCTTCTTCAGATTATTGATT+TGG | 0.273791 | 8.4:+3121718 | MS.gene57896:intron |
| TCAGTGCAAGGAATTGAAAA+TGG | 0.287397 | 8.4:+3119407 | MS.gene57896:CDS |
| TCCCAGTAGCTTTCCTCTAT+TGG | 0.292216 | 8.4:-3122113 | None:intergenic |
| TGAACTGGTAAAAGAAGTTT+TGG | 0.297980 | 8.4:+3122052 | MS.gene57896:CDS |
| AAGCGCTCAGCGACAGGATT+TGG | 0.300652 | 8.4:+3122601 | MS.gene57896:CDS |
| TCCATTGACATTATTGGTCT+TGG | 0.330495 | 8.4:+3119091 | MS.gene57896:CDS |
| GACATTATTGGTCTTGGAAC+GGG | 0.342266 | 8.4:+3119097 | MS.gene57896:CDS |
| TCTTGGAACGGGACCTGAAT+TGG | 0.350120 | 8.4:+3119108 | MS.gene57896:CDS |
| TTGGTCAATCAACCGTTGTT+AGG | 0.351523 | 8.4:+3118501 | MS.gene57896:CDS |
| TATGCTGGAGATGTTTCTTC+TGG | 0.355442 | 8.4:+3119145 | MS.gene57896:CDS |
| GCTCTTGGGCCCTCAATTGC+AGG | 0.355562 | 8.4:+3121767 | MS.gene57896:CDS |
| GAAATCAGGAGTGGCTGATA+TGG | 0.370259 | 8.4:+3122142 | MS.gene57896:CDS |
| AATTGTGCTAGGGGCTGTGC+TGG | 0.374616 | 8.4:+3119015 | MS.gene57896:intron |
| AGGTGAGTGGGGAGAAACTA+TGG | 0.382649 | 8.4:+3122084 | MS.gene57896:CDS |
| TTGAAAATGGGGTCCTATCT+AGG | 0.385305 | 8.4:+3119420 | MS.gene57896:CDS |
| GGGGCATGTGTAGTTGCTCT+TGG | 0.391607 | 8.4:+3121752 | MS.gene57896:CDS |
| GTTGGCAGAAGAGGCATCTA+AGG | 0.398414 | 8.4:+3119335 | MS.gene57896:CDS |
| AGGATTGGTTTGATCGGTCT+TGG | 0.403728 | 8.4:+3118545 | MS.gene57896:CDS |
| TGTAAAGGTCAAGCTGGCTT+TGG | 0.404040 | 8.4:+3119509 | MS.gene57896:CDS |
| CGTTGCTACTCTAGTGGAAT+GGG | 0.404049 | 8.4:+3122624 | MS.gene57896:CDS |
| TTGGTCAAATCAAACCTCTT+GGG | 0.406712 | 8.4:+3120229 | MS.gene57896:CDS |
| TACTGGGAATCAATGAAATC+AGG | 0.417445 | 8.4:+3122128 | MS.gene57896:CDS |
| GGGCATGTGTAGTTGCTCTT+GGG | 0.422892 | 8.4:+3121753 | MS.gene57896:CDS |
| CAGTGCAAGGAATTGAAAAT+GGG | 0.425078 | 8.4:+3119408 | MS.gene57896:CDS |
| GCGTTGCTACTCTAGTGGAA+TGG | 0.434843 | 8.4:+3122623 | MS.gene57896:CDS |
| AACTACACATGCCCCAGTTA+AGG | 0.441925 | 8.4:-3121744 | None:intergenic |
| GAGAATATGATCAGTGGAAC+AGG | 0.442053 | 8.4:+3120563 | MS.gene57896:CDS |
| TGGAAGCTTCTGAGGTGAGT+GGG | 0.445335 | 8.4:+3122072 | MS.gene57896:CDS |
| ATTGTTCTTGCCTCTTCTGA+AGG | 0.447563 | 8.4:+3118656 | MS.gene57896:CDS |
| CGCAGCTGCTAAGTCTGCTC+AGG | 0.448202 | 8.4:+3118619 | MS.gene57896:CDS |
| TCAACTACTGCACTGTATAA+GGG | 0.451795 | 8.4:+3118578 | MS.gene57896:CDS |
| GAACAAGATTGATTTGAAGT+TGG | 0.456119 | 8.4:+3118430 | MS.gene57896:CDS |
| CTTGGTCAAATCAAACCTCT+TGG | 0.456662 | 8.4:+3120228 | MS.gene57896:CDS |
| GACAAGAAGCGCTCAGCGAC+AGG | 0.458688 | 8.4:+3122595 | MS.gene57896:CDS |
| AAGCTGGCTTTGGTTGGAAA+AGG | 0.463001 | 8.4:+3119519 | MS.gene57896:CDS |
| CTTAGGGGATTCGATGTTGG+TGG | 0.464392 | 8.4:-3118127 | None:intergenic |
| ACTGCTTATGCAATTGCATC+TGG | 0.464876 | 8.4:+3118704 | MS.gene57896:CDS |
| TTTGTAGTTTGTTGATGAAA+AGG | 0.465143 | 8.4:+3122531 | MS.gene57896:intron |
| AGCGGTGAAAACATCACTAT+AGG | 0.468504 | 8.4:-3119367 | None:intergenic |
| ACTATGGAGGCTGCCAATAG+AGG | 0.468865 | 8.4:+3122100 | MS.gene57896:CDS |
| TCTTCTGAAGAGGATTTCTC+TGG | 0.470409 | 8.4:+3118473 | MS.gene57896:CDS |
| TCCAAGACCAATAATGTCAA+TGG | 0.470434 | 8.4:-3119092 | None:intergenic |
| TTGGAGGTTTGTAAGTAAGA+TGG | 0.473742 | 8.4:-3119479 | None:intergenic |
| GAGGATTTCTCTGGTAAAGT+TGG | 0.474128 | 8.4:+3118482 | MS.gene57896:CDS |
| GGACTTGGATCAAAGAGGAT+TGG | 0.480400 | 8.4:+3118530 | MS.gene57896:CDS |
| TTAGGGGATTCGATGTTGGT+GGG | 0.482229 | 8.4:-3118126 | None:intergenic |
| AAGATTGATTTGAAGTTGGA+TGG | 0.484032 | 8.4:+3118434 | MS.gene57896:CDS |
| CTCAGGGGTGTTGGCAGAAG+AGG | 0.487176 | 8.4:+3119326 | MS.gene57896:intron |
| ATCTGAAGCTTCTTCTGAAG+AGG | 0.487237 | 8.4:+3118463 | MS.gene57896:CDS |
| GATGTTGTCACAGCTTCAAA+TGG | 0.489147 | 8.4:+3120599 | MS.gene57896:CDS |
| TTATACAGTGCAGTAGTTGA+AGG | 0.495394 | 8.4:-3118575 | None:intergenic |
| AATCAAACCTCTTGGGGTGG+AGG | 0.496211 | 8.4:+3120236 | MS.gene57896:CDS |
| GGCTGCAGCAACACCTAGAT+AGG | 0.496969 | 8.4:-3119433 | None:intergenic |
| ACCTTTACAGATCCACTTGG+AGG | 0.500187 | 8.4:-3119495 | None:intergenic |
| TGCCAATAGAGGAAAGCTAC+TGG | 0.500297 | 8.4:+3122111 | MS.gene57896:CDS |
| ACTCACACTGGCAGATGCTC+TGG | 0.502116 | 8.4:+3121150 | MS.gene57896:CDS |
| GTTGTTAGGATTAAAGGACT+TGG | 0.504860 | 8.4:+3118515 | MS.gene57896:CDS |
| TTGTAACCAAGGTGTTGAAA+AGG | 0.505556 | 8.4:+3121180 | MS.gene57896:CDS |
| AAGGTCAAGCTGGCTTTGGT+TGG | 0.507620 | 8.4:+3119513 | MS.gene57896:CDS |
| GAACTCATGAAATTTGATAT+GGG | 0.511960 | 8.4:+3120171 | MS.gene57896:CDS |
| AGTGAGAAAGAGAGAAGAAG+AGG | 0.514407 | 8.4:-3118007 | None:intergenic |
| TTGATTTGGCAACCTTAACT+GGG | 0.515543 | 8.4:+3121732 | MS.gene57896:CDS |
| GAAGCTGTGACAACATCTCC+AGG | 0.517489 | 8.4:-3120593 | None:intergenic |
| AGTGGAACAGGTATGAGGCC+TGG | 0.518327 | 8.4:+3120575 | MS.gene57896:CDS |
| CCTGCTAATGTTCTCACACC+AGG | 0.523507 | 8.4:+3119199 | MS.gene57896:CDS |
| AATAACAATGGCAGAAGCTA+TGG | 0.524957 | 8.4:-3117968 | None:intergenic |
| AACCTTAGGGGATTCGATGT+TGG | 0.525516 | 8.4:-3118130 | None:intergenic |
| TGGATCTGTAAAGGTCAAGC+TGG | 0.527351 | 8.4:+3119503 | MS.gene57896:CDS |
| ATGTCAATGGATCTAACTGC+TGG | 0.528088 | 8.4:-3119079 | None:intergenic |
| TTAGGCGCTGCAAAAGCACT+TGG | 0.530667 | 8.4:+3120210 | MS.gene57896:CDS |
| GTTGAATGAAAGCTTCGCTT+AGG | 0.533152 | 8.4:-3118054 | None:intergenic |
| ATGAGTTCAATTGAACAGCC+AGG | 0.536964 | 8.4:-3120156 | None:intergenic |
| TGATCAGTGGAACAGGTATG+AGG | 0.537047 | 8.4:+3120570 | MS.gene57896:CDS |
| TGACATTATTGGTCTTGGAA+CGG | 0.541864 | 8.4:+3119096 | MS.gene57896:CDS |
| ACCTCCAAGTGGATCTGTAA+AGG | 0.542413 | 8.4:+3119494 | MS.gene57896:CDS |
| TACAACATCAAGACTGGACC+TGG | 0.549144 | 8.4:+3120138 | MS.gene57896:CDS |
| ATTTGGCGTTGCTACTCTAG+TGG | 0.550785 | 8.4:+3122618 | MS.gene57896:CDS |
| GCCAATAGAGGAAAGCTACT+GGG | 0.555482 | 8.4:+3122112 | MS.gene57896:CDS |
| TCTAGGTGTTGCTGCAGCCT+CGG | 0.555653 | 8.4:+3119437 | MS.gene57896:CDS |
| TTGTTGATGAAAAGGTTCAA+TGG | 0.556752 | 8.4:+3122539 | MS.gene57896:CDS |
| TGGTCAAATCAAACCTCTTG+GGG | 0.558742 | 8.4:+3120230 | MS.gene57896:CDS |
| GGTGGCTACAACATCAAGAC+TGG | 0.559048 | 8.4:+3120132 | MS.gene57896:CDS |
| GTAAACACTGGTGGTAGACC+AGG | 0.562483 | 8.4:+3122164 | MS.gene57896:CDS |
| CCTGGTGTGAGAACATTAGC+AGG | 0.565403 | 8.4:-3119199 | None:intergenic |
| AAGAAGAAAATTAACCTTAG+GGG | 0.566260 | 8.4:-3118142 | None:intergenic |
| ATTGTGCTAGGGGCTGTGCT+GGG | 0.569150 | 8.4:+3119016 | MS.gene57896:intron |
| CACCAACATCGAATCCCCTA+AGG | 0.573206 | 8.4:+3118128 | MS.gene57896:CDS |
| CGGATGTTGATGTGACTGAA+TGG | 0.573571 | 8.4:+3118327 | MS.gene57896:CDS |
| ACTGCACTGTATAAGGGTCT+TGG | 0.574721 | 8.4:+3118584 | MS.gene57896:CDS |
| TTGGAAGCTTCTGAGGTGAG+TGG | 0.576502 | 8.4:+3122071 | MS.gene57896:CDS |
| GGGGTGAGTGAGGCCGAGAG+TGG | 0.577763 | 8.4:-3118106 | None:intergenic |
| TGAAGAAAGTCCTTCAGAAG+AGG | 0.580183 | 8.4:-3118666 | None:intergenic |
| TTGACCTTTACAGATCCACT+TGG | 0.582503 | 8.4:-3119498 | None:intergenic |
| TCAAAGAGGATTGGTTTGAT+CGG | 0.585762 | 8.4:+3118539 | MS.gene57896:CDS |
| CTGGTATATGCTTGTAACCA+AGG | 0.587703 | 8.4:+3121169 | MS.gene57896:CDS |
| CAGTCACGTGACACCACTCT+CGG | 0.591727 | 8.4:+3118093 | MS.gene57896:CDS |
| GAAAGGAGACATACTAGCAG+TGG | 0.593850 | 8.4:+3118349 | MS.gene57896:CDS |
| GGAAGCTTCTGAGGTGAGTG+GGG | 0.596647 | 8.4:+3122073 | MS.gene57896:CDS |
| CGATGTTGGTGGGGTGAGTG+AGG | 0.602177 | 8.4:-3118116 | None:intergenic |
| TGGTTGCATATTGACATGGC+TGG | 0.610791 | 8.4:+3122559 | MS.gene57896:CDS |
| TAGGGGATTCGATGTTGGTG+GGG | 0.614139 | 8.4:-3118125 | None:intergenic |
| TTAAAGGACTTGGATCAAAG+AGG | 0.618325 | 8.4:+3118525 | MS.gene57896:CDS |
| ATTAGATGCTGATCAGTGCA+AGG | 0.622870 | 8.4:+3119395 | MS.gene57896:CDS |
| TGACTAACCTCCACCCCAAG+AGG | 0.623663 | 8.4:-3120243 | None:intergenic |
| GGTGAAAACATCACTATAGG+TGG | 0.627383 | 8.4:-3119364 | None:intergenic |
| TCAAATCAAACCTCTTGGGG+TGG | 0.629691 | 8.4:+3120233 | MS.gene57896:CDS |
| CGCTTCTTGTCATTCCACAC+AGG | 0.634105 | 8.4:-3122583 | None:intergenic |
| CTTACTTACAAACCTCCAAG+TGG | 0.646870 | 8.4:+3119483 | MS.gene57896:CDS |
| ACTGTATAAGGGTCTTGGTG+AGG | 0.650936 | 8.4:+3118589 | MS.gene57896:CDS |
| AAGTCCTTTAATCCTAACAA+CGG | 0.658258 | 8.4:-3118513 | None:intergenic |
| TGATTTGGCAACCTTAACTG+GGG | 0.658915 | 8.4:+3121733 | MS.gene57896:CDS |
| TGCTGAGGGAAGACTCACAC+TGG | 0.659444 | 8.4:+3121138 | MS.gene57896:CDS |
| AAAGGAGACATACTAGCAGT+GGG | 0.660959 | 8.4:+3118350 | MS.gene57896:CDS |
| AGTGCAAGGAATTGAAAATG+GGG | 0.671375 | 8.4:+3119409 | MS.gene57896:CDS |
| TTGACATGGCTGGTCCTGTG+TGG | 0.671937 | 8.4:+3122569 | MS.gene57896:CDS |
| TCAATGGTTGCATATTGACA+TGG | 0.673345 | 8.4:+3122555 | MS.gene57896:CDS |
| GGTGAACAACACTGATGCTG+AGG | 0.673515 | 8.4:+3121123 | MS.gene57896:intron |
| GTGAACAACACTGATGCTGA+GGG | 0.676137 | 8.4:+3121124 | MS.gene57896:CDS |
| CTCATGAAATTTGATATGGG+TGG | 0.679380 | 8.4:+3120174 | MS.gene57896:CDS |
| GTTGATGTGACTGAATGGAA+AGG | 0.683142 | 8.4:+3118332 | MS.gene57896:CDS |
| GGAATCAATGAAATCAGGAG+TGG | 0.685410 | 8.4:+3122133 | MS.gene57896:CDS |
| AACACTGGTGGTAGACCAGG+TGG | 0.694030 | 8.4:+3122167 | MS.gene57896:CDS |
| TAAGTAAGATGGATAAAACG+AGG | 0.697138 | 8.4:-3119468 | None:intergenic |
| GCTTGTGAGAATATGATCAG+TGG | 0.702653 | 8.4:+3120557 | MS.gene57896:CDS |
| GCAGCAGTGATAGAACCACC+TGG | 0.709003 | 8.4:-3122182 | None:intergenic |
| GTAAGATGGATAAAACGAGG+AGG | 0.715083 | 8.4:-3119465 | None:intergenic |
| AAAACGAGGAGGATTTGCCG+AGG | 0.716110 | 8.4:-3119454 | None:intergenic |
| GTGGCTGATATGGTAAACAC+TGG | 0.719705 | 8.4:+3122152 | MS.gene57896:CDS |
| TGAGTGGGGAGAAACTATGG+AGG | 0.741229 | 8.4:+3122087 | MS.gene57896:CDS |
| GCTGATATGGTAAACACTGG+TGG | 0.751322 | 8.4:+3122155 | MS.gene57896:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAATAAATATGAAA+TGG | - | chr8.4:3120045-3120064 | None:intergenic | 10.0% |
| !! | CAAAAAAATAAATATGAAAT+GGG | - | chr8.4:3120044-3120063 | None:intergenic | 10.0% |
| !!! | ATTTAATATTTTGATAGATT+TGG | + | chr8.4:3121295-3121314 | MS.gene57896:intron | 10.0% |
| !!! | TATTTTAAGAAACTTATTAT+TGG | + | chr8.4:3122428-3122447 | MS.gene57896:intron | 10.0% |
| !! | AAAAAAAATCAAATGAGATT+AGG | - | chr8.4:3120391-3120410 | None:intergenic | 15.0% |
| !! | AAAACATTAGTAAATAGTAA+TGG | - | chr8.4:3118815-3118834 | None:intergenic | 15.0% |
| !! | AAATATGTATATATGTCATA+AGG | + | chr8.4:3120752-3120771 | MS.gene57896:intron | 15.0% |
| !! | AAATCTGTTTATGATTTATA+GGG | - | chr8.4:3121246-3121265 | None:intergenic | 15.0% |
| !! | GAAGTTTGTAAATATAAAAA+AGG | - | chr8.4:3121596-3121615 | None:intergenic | 15.0% |
| !! | TATAAATCATAAACAGATTT+CGG | + | chr8.4:3121246-3121265 | MS.gene57896:intron | 15.0% |
| !! | TGAATTGTAAATAAAAAACA+CGG | - | chr8.4:3119573-3119592 | None:intergenic | 15.0% |
| !!! | AAAATCAATGTTTCTAAAAA+TGG | - | chr8.4:3118880-3118899 | None:intergenic | 15.0% |
| !!! | AAATCAATGTTTCTAAAAAT+GGG | - | chr8.4:3118879-3118898 | None:intergenic | 15.0% |
| !!! | ATATACTAGTTTCTTAAATA+TGG | + | chr8.4:3122457-3122476 | MS.gene57896:intron | 15.0% |
| !!! | CTAAGTTCATATATTATTTT+GGG | + | chr8.4:3121916-3121935 | MS.gene57896:intron | 15.0% |
| !!! | TAAGTTCATATATTATTTTG+GGG | + | chr8.4:3121917-3121936 | MS.gene57896:intron | 15.0% |
| !!! | TGAAAGATATATTATTTTGA+AGG | + | chr8.4:3122011-3122030 | MS.gene57896:intron | 15.0% |
| !!! | TGAAATTTTTACTATAGATT+AGG | - | chr8.4:3122395-3122414 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTGTTTGATGT+AGG | + | chr8.4:3120052-3120071 | MS.gene57896:intron | 15.0% |
| !! | AAATCTATTGTAGTTATACT+TGG | + | chr8.4:3120944-3120963 | MS.gene57896:intron | 20.0% |
| !! | AAATGTTAAGCAAATGATTT+GGG | - | chr8.4:3121279-3121298 | None:intergenic | 20.0% |
| !! | AATAATCATTTATGATGCTT+GGG | + | chr8.4:3120875-3120894 | MS.gene57896:intron | 20.0% |
| !! | ACATGAAATTGAAAAATTGA+AGG | - | chr8.4:3120283-3120302 | None:intergenic | 20.0% |
| !! | ATATTCTTAAAGAATGAGAA+TGG | - | chr8.4:3121511-3121530 | None:intergenic | 20.0% |
| !! | ATGAAACAAAAAAAGAAACA+TGG | - | chr8.4:3118180-3118199 | None:intergenic | 20.0% |
| !! | CCAAAATAATATATGAACTT+AGG | - | chr8.4:3121918-3121937 | None:intergenic | 20.0% |
| !! | GAAAAATTCAAACAATAACA+CGG | - | chr8.4:3122248-3122267 | None:intergenic | 20.0% |
| !! | GAAATCTGTTTATGATTTAT+AGG | - | chr8.4:3121247-3121266 | None:intergenic | 20.0% |
| !! | GTACAATAGGTTAAATTTAT+TGG | - | chr8.4:3120672-3120691 | None:intergenic | 20.0% |
| !! | GTTAATACTTAACAAAATCA+AGG | - | chr8.4:3121054-3121073 | None:intergenic | 20.0% |
| !! | TAAATGTTAAGCAAATGATT+TGG | - | chr8.4:3121280-3121299 | None:intergenic | 20.0% |
| !! | TAAATTTAACCTATTGTACA+TGG | + | chr8.4:3120673-3120692 | MS.gene57896:intron | 20.0% |
| !! | TATTTACAATTCATAAGACA+TGG | + | chr8.4:3119580-3119599 | MS.gene57896:intron | 20.0% |
| !! | TGAAACAAAAAAAGAAACAT+GGG | - | chr8.4:3118179-3118198 | None:intergenic | 20.0% |
| !! | TTTAAGAAACTTATTATTGG+AGG | + | chr8.4:3122431-3122450 | MS.gene57896:intron | 20.0% |
| !!! | AACATTTTATATGATGTACT+AGG | + | chr8.4:3121071-3121090 | MS.gene57896:intron | 20.0% |
| !!! | AATCAATGTTTCTAAAAATG+GGG | - | chr8.4:3118878-3118897 | None:intergenic | 20.0% |
| !!! | ATTGCGAAACTTTTTTAAAA+TGG | - | chr8.4:3120858-3120877 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTCTCAATGTAAT+TGG | + | chr8.4:3122261-3122280 | MS.gene57896:intron | 20.0% |
| !!! | CCTAAGTTCATATATTATTT+TGG | + | chr8.4:3121915-3121934 | MS.gene57896:intron | 20.0% |
| !!! | GCTTCTTCAAATATTTTATT+TGG | + | chr8.4:3120799-3120818 | MS.gene57896:intron | 20.0% |
| !!! | GTTGATAAATCTTTAATATG+AGG | + | chr8.4:3119697-3119716 | MS.gene57896:intron | 20.0% |
| !!! | TCATTCTTTAAGAATATCTA+TGG | + | chr8.4:3121514-3121533 | MS.gene57896:intron | 20.0% |
| ! | AACGTAATAAAAAAGCAGTA+AGG | - | chr8.4:3120095-3120114 | None:intergenic | 25.0% |
| ! | AAGAAGAAAATTAACCTTAG+GGG | - | chr8.4:3118145-3118164 | None:intergenic | 25.0% |
| ! | AGACATGGAAAAATTTGAAA+CGG | + | chr8.4:3119595-3119614 | MS.gene57896:intron | 25.0% |
| ! | AGTCAAAATGTGAATTTAGT+TGG | - | chr8.4:3121465-3121484 | None:intergenic | 25.0% |
| ! | AGTGTTTGATGTGTTAAAAT+AGG | + | chr8.4:3118782-3118801 | MS.gene57896:intron | 25.0% |
| ! | ATAATAAGAGTTGTTGAGTA+TGG | + | chr8.4:3120418-3120437 | MS.gene57896:intron | 25.0% |
| ! | ATATGTTTACAGAGTTCATA+GGG | - | chr8.4:3121021-3121040 | None:intergenic | 25.0% |
| ! | CAAAATTTCTTGCTAGAATT+AGG | + | chr8.4:3121854-3121873 | MS.gene57896:intron | 25.0% |
| ! | CAATAATCATTTATGATGCT+TGG | + | chr8.4:3120874-3120893 | MS.gene57896:intron | 25.0% |
| ! | GAACTCATGAAATTTGATAT+GGG | + | chr8.4:3120171-3120190 | MS.gene57896:CDS | 25.0% |
| ! | GAAGAAGAAAATTAACCTTA+GGG | - | chr8.4:3118146-3118165 | None:intergenic | 25.0% |
| ! | GGAATATGGTAATAAAAAAG+AGG | - | chr8.4:3121835-3121854 | None:intergenic | 25.0% |
| ! | GTGTTTGATGTGTTAAAATA+GGG | + | chr8.4:3118783-3118802 | MS.gene57896:intron | 25.0% |
| ! | TGAACTCATGAAATTTGATA+TGG | + | chr8.4:3120170-3120189 | MS.gene57896:CDS | 25.0% |
| ! | TGAAGAAGAAAATTAACCTT+AGG | - | chr8.4:3118147-3118166 | None:intergenic | 25.0% |
| ! | TGTAAATAAAAAACACGGTT+TGG | - | chr8.4:3119568-3119587 | None:intergenic | 25.0% |
| ! | TTCAAATGGAAAAACTATTG+AGG | + | chr8.4:3120613-3120632 | MS.gene57896:CDS | 25.0% |
| !! | AAAACTCTCAATATTTTGCT+TGG | + | chr8.4:3121881-3121900 | MS.gene57896:intron | 25.0% |
| !! | AATTTTCACAAACACGTTAA+AGG | - | chr8.4:3118283-3118302 | None:intergenic | 25.0% |
| !! | ATCATCACAAACTTTAGAAA+TGG | + | chr8.4:3118901-3118920 | MS.gene57896:intron | 25.0% |
| !! | CTAATTCTAGCAAGAAATTT+TGG | - | chr8.4:3121856-3121875 | None:intergenic | 25.0% |
| !! | GTTGTTTCAACTCAAAATTA+AGG | + | chr8.4:3120001-3120020 | MS.gene57896:intron | 25.0% |
| !! | TCTTCTTCAGATTATTGATT+TGG | + | chr8.4:3121718-3121737 | MS.gene57896:intron | 25.0% |
| !! | TTTATACAAACCCGTTATTT+TGG | - | chr8.4:3120349-3120368 | None:intergenic | 25.0% |
| !!! | AATGATTTGTTTGGAATACT+TGG | + | chr8.4:3120479-3120498 | MS.gene57896:intron | 25.0% |
| !!! | ATCAGCATCTAATATTTTAG+CGG | - | chr8.4:3119388-3119407 | None:intergenic | 25.0% |
| !!! | ATTATCCATGGTTTTGATTA+TGG | + | chr8.4:3119631-3119650 | MS.gene57896:intron | 25.0% |
| !!! | GGATTTTCATTTTACTTTTC+TGG | + | chr8.4:3120439-3120458 | MS.gene57896:intron | 25.0% |
| !!! | GTTTCTTCTGGAATAATTTT+TGG | + | chr8.4:3119157-3119176 | MS.gene57896:CDS | 25.0% |
| !!! | TAGCAAGAAATTTTGGAATA+TGG | - | chr8.4:3121849-3121868 | None:intergenic | 25.0% |
| !!! | TTATTTTTACCTGCAATTGA+GGG | - | chr8.4:3121779-3121798 | None:intergenic | 25.0% |
| !!! | TTCTGGAATAATTTTTGGAA+GGG | + | chr8.4:3119162-3119181 | MS.gene57896:CDS | 25.0% |
| !!! | TTTATTTTTACCTGCAATTG+AGG | - | chr8.4:3121780-3121799 | None:intergenic | 25.0% |
| !!! | TTTGTAGTTTGTTGATGAAA+AGG | + | chr8.4:3122531-3122550 | MS.gene57896:intron | 25.0% |
| !!! | TTTTCATTTTACTTTTCTGG+TGG | + | chr8.4:3120442-3120461 | MS.gene57896:intron | 25.0% |
| !!! | TTTTGAGAAAGCAATAACAA+TGG | - | chr8.4:3117983-3118002 | None:intergenic | 25.0% |
| AAGTCCTTTAATCCTAACAA+CGG | - | chr8.4:3118516-3118535 | None:intergenic | 30.0% | |
| AATAAAAACCTTGCATATGC+AGG | + | chr8.4:3120517-3120536 | MS.gene57896:intron | 30.0% | |
| AATAATTTGATCCATGTAGC+CGG | - | chr8.4:3119794-3119813 | None:intergenic | 30.0% | |
| ATATACACACAAGACAAGTA+GGG | - | chr8.4:3118934-3118953 | None:intergenic | 30.0% | |
| ATCAAAACCATGGATAATAC+AGG | - | chr8.4:3119629-3119648 | None:intergenic | 30.0% | |
| ATGTACTAGGAATTTGACAT+TGG | + | chr8.4:3121084-3121103 | MS.gene57896:intron | 30.0% | |
| ATTATTGGGTGATGTAGTAT+GGG | + | chr8.4:3120319-3120338 | MS.gene57896:intron | 30.0% | |
| ATTCCAAACAAATCATTCCA+CGG | - | chr8.4:3120476-3120495 | None:intergenic | 30.0% | |
| CACAATCACTTGGATAAATA+TGG | - | chr8.4:3122351-3122370 | None:intergenic | 30.0% | |
| CATATGTTTACAGAGTTCAT+AGG | - | chr8.4:3121022-3121041 | None:intergenic | 30.0% | |
| GATGAAAGAGAATTACTAGT+AGG | + | chr8.4:3121336-3121355 | MS.gene57896:intron | 30.0% | |
| GTTAGATCCATTGACATTAT+TGG | + | chr8.4:3119085-3119104 | MS.gene57896:CDS | 30.0% | |
| TAAGTAAGATGGATAAAACG+AGG | - | chr8.4:3119471-3119490 | None:intergenic | 30.0% | |
| TACAATGGCATACTAAGTAT+TGG | + | chr8.4:3119965-3119984 | MS.gene57896:intron | 30.0% | |
| TATGTTTACAGAGTTCATAG+GGG | - | chr8.4:3121020-3121039 | None:intergenic | 30.0% | |
| TCAAAACCATGGATAATACA+GGG | - | chr8.4:3119628-3119647 | None:intergenic | 30.0% | |
| ! | AAAGATCTCTTTTTCTGCTA+CGG | + | chr8.4:3118307-3118326 | MS.gene57896:intron | 30.0% |
| ! | AAGATTTGCTTAGGGATTAT+TGG | + | chr8.4:3120304-3120323 | MS.gene57896:intron | 30.0% |
| ! | AGATTTGCTTAGGGATTATT+GGG | + | chr8.4:3120305-3120324 | MS.gene57896:intron | 30.0% |
| ! | AGGTTAGTCACTTAAATCAT+TGG | + | chr8.4:3120256-3120275 | MS.gene57896:intron | 30.0% |
| ! | ATATAAGAGTGTACTCAAGA+CGG | - | chr8.4:3121386-3121405 | None:intergenic | 30.0% |
| ! | ATTGGTGTAACTTTTTGTGT+AGG | + | chr8.4:3121102-3121121 | MS.gene57896:intron | 30.0% |
| ! | GACATGGAAAAATTTGAAAC+GGG | + | chr8.4:3119596-3119615 | MS.gene57896:intron | 30.0% |
| ! | TCTAAAATCTGATCTGTACT+TGG | + | chr8.4:3119291-3119310 | MS.gene57896:intron | 30.0% |
| ! | TCTTTTACCAGTTCATCATT+GGG | - | chr8.4:3122047-3122066 | None:intergenic | 30.0% |
| ! | TGAACTGGTAAAAGAAGTTT+TGG | + | chr8.4:3122052-3122071 | MS.gene57896:CDS | 30.0% |
| ! | TTCATGTCAAGATTTGCTTA+GGG | + | chr8.4:3120296-3120315 | MS.gene57896:intron | 30.0% |
| ! | TTCTTTTACCAGTTCATCAT+TGG | - | chr8.4:3122048-3122067 | None:intergenic | 30.0% |
| ! | TTGCAATTGAAGAGAAGTTT+TGG | + | chr8.4:3120994-3121013 | MS.gene57896:intron | 30.0% |
| ! | TTGTTGATGAAAAGGTTCAA+TGG | + | chr8.4:3122539-3122558 | MS.gene57896:CDS | 30.0% |
| ! | TTTCATGTCAAGATTTGCTT+AGG | + | chr8.4:3120295-3120314 | MS.gene57896:intron | 30.0% |
| !! | AAGATTGATTTGAAGTTGGA+TGG | + | chr8.4:3118434-3118453 | MS.gene57896:CDS | 30.0% |
| !! | CTCATATGTTGTTTGTTTTC+TGG | + | chr8.4:3121615-3121634 | MS.gene57896:intron | 30.0% |
| !! | GAAAAGGTTTGACTTTTGAT+AGG | + | chr8.4:3119535-3119554 | MS.gene57896:CDS | 30.0% |
| !! | GAACAAGATTGATTTGAAGT+TGG | + | chr8.4:3118430-3118449 | MS.gene57896:CDS | 30.0% |
| !! | GGACAAGTTTACTTTTGTTT+CGG | + | chr8.4:3121535-3121554 | MS.gene57896:intron | 30.0% |
| !! | GTTTGACAGTTTTATCTTTC+AGG | - | chr8.4:3121975-3121994 | None:intergenic | 30.0% |
| !!! | AGTTTTAGAATACTGCTAAC+TGG | + | chr8.4:3121686-3121705 | MS.gene57896:intron | 30.0% |
| !!! | CTTCTGGAATAATTTTTGGA+AGG | + | chr8.4:3119161-3119180 | MS.gene57896:CDS | 30.0% |
| AAAATGAACCTGCATATGCA+AGG | - | chr8.4:3120528-3120547 | None:intergenic | 35.0% | |
| AAATTATTGGTCCGTCTCAT+AGG | + | chr8.4:3119806-3119825 | MS.gene57896:intron | 35.0% | |
| AATAACAATGGCAGAAGCTA+TGG | - | chr8.4:3117971-3117990 | None:intergenic | 35.0% | |
| AATTATTGGTCCGTCTCATA+GGG | + | chr8.4:3119807-3119826 | MS.gene57896:intron | 35.0% | |
| ACTCAAAATTAAGGAGTCCA+TGG | + | chr8.4:3120010-3120029 | MS.gene57896:intron | 35.0% | |
| ACTCAAGACGGTGTAAAAAA+TGG | - | chr8.4:3121374-3121393 | None:intergenic | 35.0% | |
| AGCAGAAAAAGAGATCTTTC+AGG | - | chr8.4:3118306-3118325 | None:intergenic | 35.0% | |
| AGTATGCCATTGTAGCAAAT+TGG | - | chr8.4:3119959-3119978 | None:intergenic | 35.0% | |
| AGTGCAAGGAATTGAAAATG+GGG | + | chr8.4:3119409-3119428 | MS.gene57896:CDS | 35.0% | |
| ATATATGTCATAAGGTCCAG+TGG | + | chr8.4:3120760-3120779 | MS.gene57896:intron | 35.0% | |
| ATGGAAAAACTATTGAGGTG+AGG | + | chr8.4:3120618-3120637 | MS.gene57896:intron | 35.0% | |
| CAGTGCAAGGAATTGAAAAT+GGG | + | chr8.4:3119408-3119427 | MS.gene57896:CDS | 35.0% | |
| CATATACACACAAGACAAGT+AGG | - | chr8.4:3118935-3118954 | None:intergenic | 35.0% | |
| CTCAAGACGGTGTAAAAAAT+GGG | - | chr8.4:3121373-3121392 | None:intergenic | 35.0% | |
| CTCATGAAATTTGATATGGG+TGG | + | chr8.4:3120174-3120193 | MS.gene57896:CDS | 35.0% | |
| GATTATTGGGTGATGTAGTA+TGG | + | chr8.4:3120318-3120337 | MS.gene57896:intron | 35.0% | |
| GCATCAATACCATGTACAAT+AGG | - | chr8.4:3120685-3120704 | None:intergenic | 35.0% | |
| GGCTACATGGATCAAATTAT+TGG | + | chr8.4:3119793-3119812 | MS.gene57896:intron | 35.0% | |
| GTATGGGATCTCCAAAATAA+CGG | + | chr8.4:3120335-3120354 | MS.gene57896:intron | 35.0% | |
| GTTGTTAGGATTAAAGGACT+TGG | + | chr8.4:3118515-3118534 | MS.gene57896:CDS | 35.0% | |
| TACTGGGAATCAATGAAATC+AGG | + | chr8.4:3122128-3122147 | MS.gene57896:CDS | 35.0% | |
| TATAGCTACATTTGATGCGT+GGG | + | chr8.4:3118988-3119007 | MS.gene57896:intron | 35.0% | |
| TATGGGATCTCCAAAATAAC+GGG | + | chr8.4:3120336-3120355 | MS.gene57896:intron | 35.0% | |
| TATGGTACCAAAACTATCAG+CGG | + | chr8.4:3119649-3119668 | MS.gene57896:intron | 35.0% | |
| TCAACCGTTGTTAGGATTAA+AGG | + | chr8.4:3118509-3118528 | MS.gene57896:CDS | 35.0% | |
| TCAACTACTGCACTGTATAA+GGG | + | chr8.4:3118578-3118597 | MS.gene57896:CDS | 35.0% | |
| TCAATGGTTGCATATTGACA+TGG | + | chr8.4:3122555-3122574 | MS.gene57896:CDS | 35.0% | |
| TCAGTGCAAGGAATTGAAAA+TGG | + | chr8.4:3119407-3119426 | MS.gene57896:CDS | 35.0% | |
| TCCAAGACCAATAATGTCAA+TGG | - | chr8.4:3119095-3119114 | None:intergenic | 35.0% | |
| TGAAATGGGAAAGAAAACCA+TGG | - | chr8.4:3120030-3120049 | None:intergenic | 35.0% | |
| TGGAAAAACTATTGAGGTGA+GGG | + | chr8.4:3120619-3120638 | MS.gene57896:intron | 35.0% | |
| TGGTACCATAATCAAAACCA+TGG | - | chr8.4:3119639-3119658 | None:intergenic | 35.0% | |
| TTAAAGGACTTGGATCAAAG+AGG | + | chr8.4:3118525-3118544 | MS.gene57896:CDS | 35.0% | |
| TTATACAGTGCAGTAGTTGA+AGG | - | chr8.4:3118578-3118597 | None:intergenic | 35.0% | |
| TTATAGCTACATTTGATGCG+TGG | + | chr8.4:3118987-3119006 | MS.gene57896:intron | 35.0% | |
| TTCAACTACTGCACTGTATA+AGG | + | chr8.4:3118577-3118596 | MS.gene57896:CDS | 35.0% | |
| TTGGAGGTTTGTAAGTAAGA+TGG | - | chr8.4:3119482-3119501 | None:intergenic | 35.0% | |
| TTGGTCAAATCAAACCTCTT+GGG | + | chr8.4:3120229-3120248 | MS.gene57896:CDS | 35.0% | |
| ! | AGTATACCTTTTCAACACCT+TGG | - | chr8.4:3121189-3121208 | None:intergenic | 35.0% |
| ! | CACAAACTTTAGAAATGGTG+AGG | + | chr8.4:3118906-3118925 | MS.gene57896:intron | 35.0% |
| ! | GATTCGACAAAGTTTTACGT+TGG | + | chr8.4:3119829-3119848 | MS.gene57896:intron | 35.0% |
| ! | GATTTGTTTGGAATACTTGG+TGG | + | chr8.4:3120482-3120501 | MS.gene57896:intron | 35.0% |
| ! | GTTAAGCAAATGATTTGGGA+AGG | - | chr8.4:3121275-3121294 | None:intergenic | 35.0% |
| ! | TCCATTGACATTATTGGTCT+TGG | + | chr8.4:3119091-3119110 | MS.gene57896:CDS | 35.0% |
| ! | TTCATAACCGCTGATAGTTT+TGG | - | chr8.4:3119659-3119678 | None:intergenic | 35.0% |
| !! | ATTGATTTGGCAACCTTAAC+TGG | + | chr8.4:3121731-3121750 | MS.gene57896:CDS | 35.0% |
| !! | TCAAAGAGGATTGGTTTGAT+CGG | + | chr8.4:3118539-3118558 | MS.gene57896:CDS | 35.0% |
| !! | TGACATTATTGGTCTTGGAA+CGG | + | chr8.4:3119096-3119115 | MS.gene57896:CDS | 35.0% |
| !! | TTGAGCTTTTTCTCCAATTC+AGG | - | chr8.4:3119124-3119143 | None:intergenic | 35.0% |
| !! | TTGATTTGGCAACCTTAACT+GGG | + | chr8.4:3121732-3121751 | MS.gene57896:CDS | 35.0% |
| !! | TTGTAACCAAGGTGTTGAAA+AGG | + | chr8.4:3121180-3121199 | MS.gene57896:CDS | 35.0% |
| !! | TTTCCGTGGAATGATTTGTT+TGG | + | chr8.4:3120470-3120489 | MS.gene57896:intron | 35.0% |
| !!! | ACTTGTTGATTTTCTCGTTG+TGG | + | chr8.4:3118227-3118246 | MS.gene57896:intron | 35.0% |
| !!! | ATCTGTACTTGGTGATGTTT+TGG | + | chr8.4:3119302-3119321 | MS.gene57896:intron | 35.0% |
| !!! | CGTTTTCTGCTTTTTATCAG+TGG | + | chr8.4:3120111-3120130 | MS.gene57896:intron | 35.0% |
| !!! | CTTGTTGATTTTCTCGTTGT+GGG | + | chr8.4:3118228-3118247 | MS.gene57896:intron | 35.0% |
| !!! | TTTCTGCTTTTTATCAGTGG+TGG | + | chr8.4:3120114-3120133 | MS.gene57896:intron | 35.0% |
| AAACCATGGATAATACAGGG+TGG | - | chr8.4:3119625-3119644 | None:intergenic | 40.0% | |
| AAAGGAGACATACTAGCAGT+GGG | + | chr8.4:3118350-3118369 | MS.gene57896:CDS | 40.0% | |
| ACAAATTACATGCTGTCCAC+TGG | - | chr8.4:3120779-3120798 | None:intergenic | 40.0% | |
| ACTGCTTATGCAATTGCATC+TGG | + | chr8.4:3118704-3118723 | MS.gene57896:CDS | 40.0% | |
| AGCGGTGAAAACATCACTAT+AGG | - | chr8.4:3119370-3119389 | None:intergenic | 40.0% | |
| AGTGAGAAAGAGAGAAGAAG+AGG | - | chr8.4:3118010-3118029 | None:intergenic | 40.0% | |
| ATGAGTTCAATTGAACAGCC+AGG | - | chr8.4:3120159-3120178 | None:intergenic | 40.0% | |
| ATGCTTGACAAGGCTAACAT+AGG | + | chr8.4:3119903-3119922 | MS.gene57896:intron | 40.0% | |
| ATGTAATTGGACAGCTGTGT+TGG | + | chr8.4:3122274-3122293 | MS.gene57896:intron | 40.0% | |
| ATGTCAATGGATCTAACTGC+TGG | - | chr8.4:3119082-3119101 | None:intergenic | 40.0% | |
| ATTAGATGCTGATCAGTGCA+AGG | + | chr8.4:3119395-3119414 | MS.gene57896:CDS | 40.0% | |
| ATTCCACCCTGTATTATCCA+TGG | + | chr8.4:3119619-3119638 | MS.gene57896:intron | 40.0% | |
| ATTGTTCTTGCCTCTTCTGA+AGG | + | chr8.4:3118656-3118675 | MS.gene57896:CDS | 40.0% | |
| CAGATGTTATTACCACTCCA+CGG | - | chr8.4:3122303-3122322 | None:intergenic | 40.0% | |
| CTGGTATATGCTTGTAACCA+AGG | + | chr8.4:3121169-3121188 | MS.gene57896:CDS | 40.0% | |
| CTTACTTACAAACCTCCAAG+TGG | + | chr8.4:3119483-3119502 | MS.gene57896:CDS | 40.0% | |
| CTTGGTCAAATCAAACCTCT+TGG | + | chr8.4:3120228-3120247 | MS.gene57896:CDS | 40.0% | |
| GAGAAAAAGCTCAAGTATGC+TGG | + | chr8.4:3119130-3119149 | MS.gene57896:CDS | 40.0% | |
| GAGAATATGATCAGTGGAAC+AGG | + | chr8.4:3120563-3120582 | MS.gene57896:CDS | 40.0% | |
| GAGGATTTCTCTGGTAAAGT+TGG | + | chr8.4:3118482-3118501 | MS.gene57896:CDS | 40.0% | |
| GATGTTGTCACAGCTTCAAA+TGG | + | chr8.4:3120599-3120618 | MS.gene57896:CDS | 40.0% | |
| GCTTGTGAGAATATGATCAG+TGG | + | chr8.4:3120557-3120576 | MS.gene57896:CDS | 40.0% | |
| GGAATCAATGAAATCAGGAG+TGG | + | chr8.4:3122133-3122152 | MS.gene57896:CDS | 40.0% | |
| GGTGAAAACATCACTATAGG+TGG | - | chr8.4:3119367-3119386 | None:intergenic | 40.0% | |
| GTAAGATGGATAAAACGAGG+AGG | - | chr8.4:3119468-3119487 | None:intergenic | 40.0% | |
| GTTGAATGAAAGCTTCGCTT+AGG | - | chr8.4:3118057-3118076 | None:intergenic | 40.0% | |
| GTTGATGTGACTGAATGGAA+AGG | + | chr8.4:3118332-3118351 | MS.gene57896:CDS | 40.0% | |
| TAAAAGGAGAGGGTTGTGTT+GGG | - | chr8.4:3119864-3119883 | None:intergenic | 40.0% | |
| TATGCTGGAGATGTTTCTTC+TGG | + | chr8.4:3119145-3119164 | MS.gene57896:CDS | 40.0% | |
| TATTGAGGTGAGGGTTTACT+AGG | + | chr8.4:3120628-3120647 | MS.gene57896:intron | 40.0% | |
| TGAAGAAAGTCCTTCAGAAG+AGG | - | chr8.4:3118669-3118688 | None:intergenic | 40.0% | |
| TGGTCAAATCAAACCTCTTG+GGG | + | chr8.4:3120230-3120249 | MS.gene57896:CDS | 40.0% | |
| TGTAATTGGACAGCTGTGTT+GGG | + | chr8.4:3122275-3122294 | MS.gene57896:intron | 40.0% | |
| TTGAAAATGGGGTCCTATCT+AGG | + | chr8.4:3119420-3119439 | MS.gene57896:CDS | 40.0% | |
| TTGACCTTTACAGATCCACT+TGG | - | chr8.4:3119501-3119520 | None:intergenic | 40.0% | |
| TTGGTCAATCAACCGTTGTT+AGG | + | chr8.4:3118501-3118520 | MS.gene57896:CDS | 40.0% | |
| TTTGTCGAATCCCTATGAGA+CGG | - | chr8.4:3119820-3119839 | None:intergenic | 40.0% | |
| ! | ATCTGAAGCTTCTTCTGAAG+AGG | + | chr8.4:3118463-3118482 | MS.gene57896:CDS | 40.0% |
| ! | CAAGCCTTATCCCACTAAAT+GGG | + | chr8.4:3119767-3119786 | MS.gene57896:intron | 40.0% |
| ! | GTTTTCACCCAATGATGAAC+TGG | + | chr8.4:3122037-3122056 | MS.gene57896:CDS | 40.0% |
| ! | TAGGACAGTTCAAGTTCCAA+TGG | - | chr8.4:3122376-3122395 | None:intergenic | 40.0% |
| ! | TCTTCTGAAGAGGATTTCTC+TGG | + | chr8.4:3118473-3118492 | MS.gene57896:CDS | 40.0% |
| ! | TGATTTGGCAACCTTAACTG+GGG | + | chr8.4:3121733-3121752 | MS.gene57896:CDS | 40.0% |
| !! | GACATTATTGGTCTTGGAAC+GGG | + | chr8.4:3119097-3119116 | MS.gene57896:CDS | 40.0% |
| !! | GCATTGCCAATTTGCTACAA+TGG | + | chr8.4:3119950-3119969 | MS.gene57896:intron | 40.0% |
| !! | TTTAAAGTGTCGTACGAACC+TGG | - | chr8.4:3119220-3119239 | None:intergenic | 40.0% |
| !!! | AGAAGTTTTGGAAGCTTCTG+AGG | + | chr8.4:3122064-3122083 | MS.gene57896:CDS | 40.0% |
| !!! | TTGGTGATGTTTTGGTCTCA+GGG | + | chr8.4:3119310-3119329 | MS.gene57896:intron | 40.0% |
| AACCTTAGGGGATTCGATGT+TGG | - | chr8.4:3118133-3118152 | None:intergenic | 45.0% | |
| AACTACACATGCCCCAGTTA+AGG | - | chr8.4:3121747-3121766 | None:intergenic | 45.0% | |
| ACCTCCAAGTGGATCTGTAA+AGG | + | chr8.4:3119494-3119513 | MS.gene57896:CDS | 45.0% | |
| ACCTTTACAGATCCACTTGG+AGG | - | chr8.4:3119498-3119517 | None:intergenic | 45.0% | |
| ACTGCACTGTATAAGGGTCT+TGG | + | chr8.4:3118584-3118603 | MS.gene57896:CDS | 45.0% | |
| ACTGTATAAGGGTCTTGGTG+AGG | + | chr8.4:3118589-3118608 | MS.gene57896:CDS | 45.0% | |
| ATTAAGCACGCACCTGTTTC+AGG | - | chr8.4:3122214-3122233 | None:intergenic | 45.0% | |
| ATTTGGCGTTGCTACTCTAG+TGG | + | chr8.4:3122618-3122637 | MS.gene57896:CDS | 45.0% | |
| CCATTTAGTGGGATAAGGCT+TGG | - | chr8.4:3119769-3119788 | None:intergenic | 45.0% | |
| CGGATGTTGATGTGACTGAA+TGG | + | chr8.4:3118327-3118346 | MS.gene57896:CDS | 45.0% | |
| CGTTGCTACTCTAGTGGAAT+GGG | + | chr8.4:3122624-3122643 | MS.gene57896:CDS | 45.0% | |
| CTTATCCCACTAAATGGGTC+CGG | + | chr8.4:3119772-3119791 | MS.gene57896:intron | 45.0% | |
| GAAAGGAGACATACTAGCAG+TGG | + | chr8.4:3118349-3118368 | MS.gene57896:CDS | 45.0% | |
| GAAATCAGGAGTGGCTGATA+TGG | + | chr8.4:3122142-3122161 | MS.gene57896:CDS | 45.0% | |
| GCCAATAGAGGAAAGCTACT+GGG | + | chr8.4:3122112-3122131 | MS.gene57896:CDS | 45.0% | |
| GCTGATATGGTAAACACTGG+TGG | + | chr8.4:3122155-3122174 | MS.gene57896:CDS | 45.0% | |
| GGACTTGGATCAAAGAGGAT+TGG | + | chr8.4:3118530-3118549 | MS.gene57896:CDS | 45.0% | |
| GTAAAAGGAGAGGGTTGTGT+TGG | - | chr8.4:3119865-3119884 | None:intergenic | 45.0% | |
| GTGAACAACACTGATGCTGA+GGG | + | chr8.4:3121124-3121143 | MS.gene57896:CDS | 45.0% | |
| GTGGCTGATATGGTAAACAC+TGG | + | chr8.4:3122152-3122171 | MS.gene57896:CDS | 45.0% | |
| TACAACATCAAGACTGGACC+TGG | + | chr8.4:3120138-3120157 | MS.gene57896:CDS | 45.0% | |
| TCAAATCAAACCTCTTGGGG+TGG | + | chr8.4:3120233-3120252 | MS.gene57896:CDS | 45.0% | |
| TCCAAGTGATTGTGTGCCAT+TGG | + | chr8.4:3122357-3122376 | MS.gene57896:intron | 45.0% | |
| TCCAATGGCACACAATCACT+TGG | - | chr8.4:3122361-3122380 | None:intergenic | 45.0% | |
| TCCCAGTAGCTTTCCTCTAT+TGG | - | chr8.4:3122116-3122135 | None:intergenic | 45.0% | |
| TGATCAGTGGAACAGGTATG+AGG | + | chr8.4:3120570-3120589 | MS.gene57896:CDS | 45.0% | |
| TGCCAATAGAGGAAAGCTAC+TGG | + | chr8.4:3122111-3122130 | MS.gene57896:CDS | 45.0% | |
| TGGATCTGTAAAGGTCAAGC+TGG | + | chr8.4:3119503-3119522 | MS.gene57896:CDS | 45.0% | |
| TGGTTGCATATTGACATGGC+TGG | + | chr8.4:3122559-3122578 | MS.gene57896:CDS | 45.0% | |
| TTAGGGGATTCGATGTTGGT+GGG | - | chr8.4:3118129-3118148 | None:intergenic | 45.0% | |
| ! | AGCACTTGCTAGGCAAATCT+TGG | - | chr8.4:3121565-3121584 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCCCACTAAA+TGG | + | chr8.4:3119766-3119785 | MS.gene57896:intron | 45.0% |
| ! | TGCTGCTCTTTTCCTGAAAC+AGG | + | chr8.4:3122199-3122218 | MS.gene57896:CDS | 45.0% |
| ! | TGTAAAGGTCAAGCTGGCTT+TGG | + | chr8.4:3119509-3119528 | MS.gene57896:CDS | 45.0% |
| ! | TTTTGCAGCGCCTAAAACTG+CGG | - | chr8.4:3120205-3120224 | None:intergenic | 45.0% |
| !! | AAGCTGGCTTTGGTTGGAAA+AGG | + | chr8.4:3119519-3119538 | MS.gene57896:CDS | 45.0% |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | + | chr8.4:3119838-3119857 | MS.gene57896:intron | 45.0% |
| !! | AGGATTGGTTTGATCGGTCT+TGG | + | chr8.4:3118545-3118564 | MS.gene57896:CDS | 45.0% |
| !!! | CTTGGTGATGTTTTGGTCTC+AGG | + | chr8.4:3119309-3119328 | MS.gene57896:intron | 45.0% |
| !!! | TGGTGATGTTTTGGTCTCAG+GGG | + | chr8.4:3119311-3119330 | MS.gene57896:intron | 45.0% |
| AAAACGAGGAGGATTTGCCG+AGG | - | chr8.4:3119457-3119476 | None:intergenic | 50.0% | |
| AATCAAACCTCTTGGGGTGG+AGG | + | chr8.4:3120236-3120255 | MS.gene57896:CDS | 50.0% | |
| ACTAAATGGGTCCGGCTACA+TGG | + | chr8.4:3119780-3119799 | MS.gene57896:intron | 50.0% | |
| ACTATGGAGGCTGCCAATAG+AGG | + | chr8.4:3122100-3122119 | MS.gene57896:CDS | 50.0% | |
| AGGTGAGTGGGGAGAAACTA+TGG | + | chr8.4:3122084-3122103 | MS.gene57896:CDS | 50.0% | |
| ATGTAGCCGGACCCATTTAG+TGG | - | chr8.4:3119781-3119800 | None:intergenic | 50.0% | |
| CAAGGCTGGGTAAAAGGAGA+GGG | - | chr8.4:3119874-3119893 | None:intergenic | 50.0% | |
| CACCAACATCGAATCCCCTA+AGG | + | chr8.4:3118128-3118147 | MS.gene57896:CDS | 50.0% | |
| CCTGCTAATGTTCTCACACC+AGG | + | chr8.4:3119199-3119218 | MS.gene57896:CDS | 50.0% | |
| CCTGGTGTGAGAACATTAGC+AGG | - | chr8.4:3119202-3119221 | None:intergenic | 50.0% | |
| CGCTTCTTGTCATTCCACAC+AGG | - | chr8.4:3122586-3122605 | None:intergenic | 50.0% | |
| CGGACCCATTTAGTGGGATA+AGG | - | chr8.4:3119774-3119793 | None:intergenic | 50.0% | |
| CGTGGGCTTGAATTGTGCTA+GGG | + | chr8.4:3119005-3119024 | MS.gene57896:intron | 50.0% | |
| CTTAGGGGATTCGATGTTGG+TGG | - | chr8.4:3118130-3118149 | None:intergenic | 50.0% | |
| GAAGCTGTGACAACATCTCC+AGG | - | chr8.4:3120596-3120615 | None:intergenic | 50.0% | |
| GCGTTGCTACTCTAGTGGAA+TGG | + | chr8.4:3122623-3122642 | MS.gene57896:CDS | 50.0% | |
| GGGCATGTGTAGTTGCTCTT+GGG | + | chr8.4:3121753-3121772 | MS.gene57896:CDS | 50.0% | |
| GGTGAACAACACTGATGCTG+AGG | + | chr8.4:3121123-3121142 | MS.gene57896:intron | 50.0% | |
| GGTGGCTACAACATCAAGAC+TGG | + | chr8.4:3120132-3120151 | MS.gene57896:CDS | 50.0% | |
| GTAAACACTGGTGGTAGACC+AGG | + | chr8.4:3122164-3122183 | MS.gene57896:CDS | 50.0% | |
| GTGGGCTTGAATTGTGCTAG+GGG | + | chr8.4:3119006-3119025 | MS.gene57896:intron | 50.0% | |
| TAGGGGATTCGATGTTGGTG+GGG | - | chr8.4:3118128-3118147 | None:intergenic | 50.0% | |
| TCTTGGAACGGGACCTGAAT+TGG | + | chr8.4:3119108-3119127 | MS.gene57896:CDS | 50.0% | |
| TGAGTGGGGAGAAACTATGG+AGG | + | chr8.4:3122087-3122106 | MS.gene57896:CDS | 50.0% | |
| TGTAGCCGGACCCATTTAGT+GGG | - | chr8.4:3119780-3119799 | None:intergenic | 50.0% | |
| ! | CTCTCCTTTTACCCAGCCTT+GGG | + | chr8.4:3119873-3119892 | MS.gene57896:intron | 50.0% |
| !! | AAGGTCAAGCTGGCTTTGGT+TGG | + | chr8.4:3119513-3119532 | MS.gene57896:CDS | 50.0% |
| !! | GTTGGCAGAAGAGGCATCTA+AGG | + | chr8.4:3119335-3119354 | MS.gene57896:CDS | 50.0% |
| !! | TGCCTAGCAAGTGCTGACTT+TGG | + | chr8.4:3121570-3121589 | MS.gene57896:intron | 50.0% |
| !! | TGGAAGCTTCTGAGGTGAGT+GGG | + | chr8.4:3122072-3122091 | MS.gene57896:CDS | 50.0% |
| !! | TTAGGCGCTGCAAAAGCACT+TGG | + | chr8.4:3120210-3120229 | MS.gene57896:CDS | 50.0% |
| !! | TTGGAAGCTTCTGAGGTGAG+TGG | + | chr8.4:3122071-3122090 | MS.gene57896:CDS | 50.0% |
| !!! | TGTTTTGGTCTCAGGGGTGT+TGG | + | chr8.4:3119317-3119336 | MS.gene57896:intron | 50.0% |
| AACACTGGTGGTAGACCAGG+TGG | + | chr8.4:3122167-3122186 | MS.gene57896:CDS | 55.0% | |
| AAGCGCTCAGCGACAGGATT+TGG | + | chr8.4:3122601-3122620 | MS.gene57896:CDS | 55.0% | |
| AATTGTGCTAGGGGCTGTGC+TGG | + | chr8.4:3119015-3119034 | MS.gene57896:intron | 55.0% | |
| ACTCACACTGGCAGATGCTC+TGG | + | chr8.4:3121150-3121169 | MS.gene57896:CDS | 55.0% | |
| AGTGGAACAGGTATGAGGCC+TGG | + | chr8.4:3120575-3120594 | MS.gene57896:CDS | 55.0% | |
| ATTGTGCTAGGGGCTGTGCT+GGG | + | chr8.4:3119016-3119035 | MS.gene57896:intron | 55.0% | |
| CAGTCACGTGACACCACTCT+CGG | + | chr8.4:3118093-3118112 | MS.gene57896:CDS | 55.0% | |
| CAGTCCCAAGGCTGGGTAAA+AGG | - | chr8.4:3119880-3119899 | None:intergenic | 55.0% | |
| CCAAGGCTGGGTAAAAGGAG+AGG | - | chr8.4:3119875-3119894 | None:intergenic | 55.0% | |
| GCAGCAGTGATAGAACCACC+TGG | - | chr8.4:3122185-3122204 | None:intergenic | 55.0% | |
| GCGTGGGCTTGAATTGTGCT+AGG | + | chr8.4:3119004-3119023 | MS.gene57896:intron | 55.0% | |
| GGCCAAAGTCAGCACTTGCT+AGG | - | chr8.4:3121575-3121594 | None:intergenic | 55.0% | |
| GGCTGCAGCAACACCTAGAT+AGG | - | chr8.4:3119436-3119455 | None:intergenic | 55.0% | |
| GGGGCATGTGTAGTTGCTCT+TGG | + | chr8.4:3121752-3121771 | MS.gene57896:CDS | 55.0% | |
| GTCAAGCATAGCCAGTCCCA+AGG | - | chr8.4:3119892-3119911 | None:intergenic | 55.0% | |
| TGACTAACCTCCACCCCAAG+AGG | - | chr8.4:3120246-3120265 | None:intergenic | 55.0% | |
| TGCTGAGGGAAGACTCACAC+TGG | + | chr8.4:3121138-3121157 | MS.gene57896:CDS | 55.0% | |
| ! | CCTCTCCTTTTACCCAGCCT+TGG | + | chr8.4:3119872-3119891 | MS.gene57896:intron | 55.0% |
| ! | CTTTTACCCAGCCTTGGGAC+TGG | + | chr8.4:3119878-3119897 | MS.gene57896:intron | 55.0% |
| ! | GGTGGTTCAGCCGCAGTTTT+AGG | + | chr8.4:3120192-3120211 | MS.gene57896:CDS | 55.0% |
| ! | TTGACATGGCTGGTCCTGTG+TGG | + | chr8.4:3122569-3122588 | MS.gene57896:CDS | 55.0% |
| !! | GGAAGCTTCTGAGGTGAGTG+GGG | + | chr8.4:3122073-3122092 | MS.gene57896:CDS | 55.0% |
| !! | GGGACTGGCTATGCTTGACA+AGG | + | chr8.4:3119893-3119912 | MS.gene57896:intron | 55.0% |
| !! | TCTAGGTGTTGCTGCAGCCT+CGG | + | chr8.4:3119437-3119456 | MS.gene57896:CDS | 55.0% |
| !!! | TTCTGGTGGCTGCTTTTCCG+TGG | + | chr8.4:3120456-3120475 | MS.gene57896:intron | 55.0% |
| AGCATAGCCAGTCCCAAGGC+TGG | - | chr8.4:3119888-3119907 | None:intergenic | 60.0% | |
| CGCAGCTGCTAAGTCTGCTC+AGG | + | chr8.4:3118619-3118638 | MS.gene57896:CDS | 60.0% | |
| GCATAGCCAGTCCCAAGGCT+GGG | - | chr8.4:3119887-3119906 | None:intergenic | 60.0% | |
| GCTCTTGGGCCCTCAATTGC+AGG | + | chr8.4:3121767-3121786 | MS.gene57896:CDS | 60.0% | |
| ! | CGATGTTGGTGGGGTGAGTG+AGG | - | chr8.4:3118119-3118138 | None:intergenic | 60.0% |
| ! | CTGTGTTGGGTACCGTGGAG+TGG | + | chr8.4:3122288-3122307 | MS.gene57896:intron | 60.0% |
| ! | GACAGCTGTGTTGGGTACCG+TGG | + | chr8.4:3122283-3122302 | MS.gene57896:intron | 60.0% |
| !! | CTCAGGGGTGTTGGCAGAAG+AGG | + | chr8.4:3119326-3119345 | MS.gene57896:intron | 60.0% |
| !! | GACAAGAAGCGCTCAGCGAC+AGG | + | chr8.4:3122595-3122614 | MS.gene57896:CDS | 60.0% |
| GGGGTGAGTGAGGCCGAGAG+TGG | - | chr8.4:3118109-3118128 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3117961 | 3122666 | 3117961 | ID=MS.gene57896 |
| chr8.4 | mRNA | 3117961 | 3122666 | 3117961 | ID=MS.gene57896.t1;Parent=MS.gene57896 |
| chr8.4 | exon | 3117961 | 3118149 | 3117961 | ID=MS.gene57896.t1.exon1;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3117961 | 3118149 | 3117961 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3118311 | 3118725 | 3118311 | ID=MS.gene57896.t1.exon2;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3118311 | 3118725 | 3118311 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3119026 | 3119220 | 3119026 | ID=MS.gene57896.t1.exon3;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3119026 | 3119220 | 3119026 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3119331 | 3119556 | 3119331 | ID=MS.gene57896.t1.exon4;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3119331 | 3119556 | 3119331 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3120131 | 3120257 | 3120131 | ID=MS.gene57896.t1.exon5;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3120131 | 3120257 | 3120131 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3120539 | 3120634 | 3120539 | ID=MS.gene57896.t1.exon6;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3120539 | 3120634 | 3120539 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3121124 | 3121201 | 3121124 | ID=MS.gene57896.t1.exon7;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3121124 | 3121201 | 3121124 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3121728 | 3121788 | 3121728 | ID=MS.gene57896.t1.exon8;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3121728 | 3121788 | 3121728 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3122033 | 3122220 | 3122033 | ID=MS.gene57896.t1.exon9;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3122033 | 3122220 | 3122033 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| chr8.4 | exon | 3122538 | 3122666 | 3122538 | ID=MS.gene57896.t1.exon10;Parent=MS.gene57896.t1 |
| chr8.4 | CDS | 3122538 | 3122666 | 3122538 | ID=cds.MS.gene57896.t1;Parent=MS.gene57896.t1 |
| Gene Sequence |
| Protein sequence |
