Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57897.t1 | XP_003610321.1 | 98.7 | 375 | 5 | 0 | 1 | 375 | 1 | 375 | 2.30E-203 | 718 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57897.t1 | Q7VG78 | 41.9 | 210 | 119 | 1 | 123 | 329 | 761 | 970 | 4.3e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57897.t1 | G7JGQ1 | 98.7 | 375 | 5 | 0 | 1 | 375 | 1 | 375 | 1.6e-203 | 718.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059154 | MS.gene57897 | 0.803255 | 3.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57897.t1 | MTR_4g130880 | 98.667 | 375 | 5 | 0 | 1 | 375 | 1 | 375 | 0.0 | 760 |
| MS.gene57897.t1 | MTR_4g130880 | 96.899 | 258 | 8 | 0 | 1 | 258 | 1 | 258 | 0.0 | 507 |
| MS.gene57897.t1 | MTR_4g007070 | 52.699 | 389 | 141 | 9 | 4 | 374 | 2 | 365 | 4.52e-118 | 347 |
| MS.gene57897.t1 | MTR_3g111690 | 53.942 | 241 | 101 | 2 | 107 | 346 | 96 | 327 | 1.99e-95 | 288 |
| MS.gene57897.t1 | MTR_0009s0230 | 54.450 | 191 | 87 | 0 | 148 | 338 | 112 | 302 | 8.25e-79 | 244 |
| MS.gene57897.t1 | MTR_0009s0230 | 54.450 | 191 | 86 | 1 | 148 | 338 | 112 | 301 | 3.33e-77 | 240 |
| MS.gene57897.t1 | MTR_2g063510 | 52.332 | 193 | 90 | 1 | 145 | 337 | 198 | 388 | 5.95e-70 | 224 |
| MS.gene57897.t1 | MTR_8g447000 | 51.579 | 190 | 90 | 1 | 145 | 334 | 192 | 379 | 1.32e-69 | 223 |
| MS.gene57897.t1 | MTR_8g066040 | 47.115 | 208 | 93 | 2 | 148 | 338 | 116 | 323 | 3.57e-68 | 218 |
| MS.gene57897.t1 | MTR_2g063510 | 46.610 | 118 | 59 | 2 | 145 | 260 | 198 | 313 | 1.57e-27 | 110 |
| MS.gene57897.t1 | MTR_8g447000 | 44.954 | 109 | 58 | 1 | 145 | 253 | 192 | 298 | 1.02e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57897.t1 | AT5G57970 | 63.112 | 347 | 118 | 2 | 4 | 341 | 2 | 347 | 2.33e-156 | 444 |
| MS.gene57897.t1 | AT5G57970 | 63.112 | 347 | 118 | 2 | 4 | 341 | 2 | 347 | 2.33e-156 | 444 |
| MS.gene57897.t1 | AT1G15970 | 52.367 | 338 | 148 | 4 | 7 | 338 | 5 | 335 | 5.08e-108 | 321 |
| MS.gene57897.t1 | AT1G15970 | 52.367 | 338 | 148 | 4 | 7 | 338 | 5 | 335 | 5.08e-108 | 321 |
| MS.gene57897.t1 | AT1G80850 | 50.867 | 346 | 136 | 7 | 4 | 338 | 2 | 324 | 3.07e-104 | 310 |
| MS.gene57897.t1 | AT1G75090 | 59.686 | 191 | 77 | 0 | 148 | 338 | 119 | 309 | 8.54e-87 | 266 |
| MS.gene57897.t1 | AT1G13635 | 48.691 | 191 | 98 | 0 | 148 | 338 | 115 | 305 | 2.12e-72 | 228 |
| MS.gene57897.t1 | AT1G13635 | 48.691 | 191 | 98 | 0 | 148 | 338 | 115 | 305 | 2.12e-72 | 228 |
| MS.gene57897.t1 | AT3G12710 | 50.000 | 190 | 93 | 1 | 148 | 337 | 122 | 309 | 2.20e-66 | 213 |
| MS.gene57897.t1 | AT5G44680 | 49.495 | 198 | 88 | 2 | 145 | 337 | 161 | 351 | 5.38e-66 | 213 |
Find 99 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAATATACCTTTGATATT+TGG | 0.167727 | 8.4:-3103492 | None:intergenic |
| CATTAGTTGCTTCAGATTTC+AGG | 0.175137 | 8.4:+3104913 | MS.gene57897:CDS |
| ACTGAGAAAGGCTGAGAAAT+TGG | 0.233316 | 8.4:+3101870 | MS.gene57897:CDS |
| GATCCAAGCACACCTCTTCT+TGG | 0.242214 | 8.4:-3102181 | None:intergenic |
| AGAAGCATCTTTCTTCTCTT+TGG | 0.257673 | 8.4:-3101911 | None:intergenic |
| CGGGAACCTGTCGGGGATAT+CGG | 0.276657 | 8.4:-3104772 | None:intergenic |
| TTGCTAATAACTTCAGCTTT+TGG | 0.286287 | 8.4:-3104803 | None:intergenic |
| CCGTCAGAAACAACACTTCT+TGG | 0.294148 | 8.4:-3102123 | None:intergenic |
| ATTGGGCAAGGAGGTTGATT+TGG | 0.323664 | 8.4:+3101888 | MS.gene57897:CDS |
| TTGAGCATCCTCATTCTTGA+TGG | 0.348083 | 8.4:-3104972 | None:intergenic |
| TCATGGAAAGCAGCATAATA+TGG | 0.372996 | 8.4:-3102982 | None:intergenic |
| TGCCAGGTCATAGTAGAGTT+TGG | 0.373213 | 8.4:+3104692 | MS.gene57897:intron |
| TTTGTGTTAATGTCAGCTTC+AGG | 0.378827 | 8.4:+3101736 | None:intergenic |
| GATGAATGCTTCGTGTTCTT+CGG | 0.379133 | 8.4:+3102005 | MS.gene57897:CDS |
| GGTCATTCGACAATTACATT+TGG | 0.384849 | 8.4:+3104714 | MS.gene57897:CDS |
| AAGGAACTTGTAGTGGTTCC+TGG | 0.388803 | 8.4:-3103427 | None:intergenic |
| TTCTTGGATTGTGCACCATC+AGG | 0.399421 | 8.4:-3102165 | None:intergenic |
| TTTCATAGCCGAGCTTCTAC+TGG | 0.408353 | 8.4:+3102045 | MS.gene57897:CDS |
| ATCACACTATCACATGCATT+TGG | 0.411863 | 8.4:-3104995 | None:intergenic |
| AGGCCTGTGTTTGGTCCTGC+TGG | 0.417888 | 8.4:+3101802 | MS.gene57897:CDS |
| GCTTGGATCACTCCCAATAC+TGG | 0.420323 | 8.4:+3102195 | MS.gene57897:CDS |
| GAGTGGAACAAACCAGTATT+GGG | 0.425297 | 8.4:-3102207 | None:intergenic |
| CTGAGAAAGGCTGAGAAATT+GGG | 0.429522 | 8.4:+3101871 | MS.gene57897:CDS |
| GCCAGGTCATAGTAGAGTTT+GGG | 0.439992 | 8.4:+3104693 | MS.gene57897:intron |
| ATACTCCTTCATGCAGGTGG+TGG | 0.445350 | 8.4:+3104871 | MS.gene57897:CDS |
| TGCTTTCCATGATGAAGAAT+GGG | 0.446554 | 8.4:+3102993 | MS.gene57897:CDS |
| CTCAAAATTAAATGAGAAGA+AGG | 0.457503 | 8.4:+3103396 | MS.gene57897:CDS |
| TACTCCTTCATGCAGGTGGT+GGG | 0.461248 | 8.4:+3104872 | MS.gene57897:CDS |
| ACATACTTGTCGTCATGTAC+TGG | 0.466966 | 8.4:-3103021 | None:intergenic |
| TGCTTCAAAGCCACTGAGAA+AGG | 0.468747 | 8.4:+3101858 | MS.gene57897:CDS |
| GGAGTGGAACAAACCAGTAT+TGG | 0.477722 | 8.4:-3102208 | None:intergenic |
| TCAGAAGCAAGGCCTGTGTT+TGG | 0.484933 | 8.4:+3101793 | MS.gene57897:CDS |
| CACATGTAGGAAACTGTTTG+AGG | 0.486819 | 8.4:+3103125 | MS.gene57897:intron |
| TTGGAATCTCCTCCTCCTGA+TGG | 0.488289 | 8.4:+3102150 | MS.gene57897:CDS |
| TATCGGAATTTGCTAAGTAT+AGG | 0.490240 | 8.4:-3104755 | None:intergenic |
| AGAAGAGGTTTCCGCGGTGT+GGG | 0.494446 | 8.4:+3104836 | MS.gene57897:CDS |
| ACATTCATAGACCTCAATCT+AGG | 0.495280 | 8.4:-3101763 | None:intergenic |
| GAATGTGTGGCTGCAGCAGA+AGG | 0.497985 | 8.4:+3104935 | MS.gene57897:CDS |
| TGTCTCTTGCTTAGAATGGC+TGG | 0.501678 | 8.4:-3103186 | None:intergenic |
| CTGCTTTCCATGATGAAGAA+TGG | 0.506293 | 8.4:+3102992 | MS.gene57897:CDS |
| CAATTTCTGATCAGAGAGTA+AGG | 0.506313 | 8.4:-3103446 | None:intergenic |
| AATCCAAGAAGAGGTGTGCT+TGG | 0.508627 | 8.4:+3102178 | MS.gene57897:CDS |
| CGCGGAAACCTCTTCTCACC+AGG | 0.511916 | 8.4:-3104829 | None:intergenic |
| TTGACTCGGTCTAATAGCTA+TGG | 0.521589 | 8.4:+3102072 | MS.gene57897:CDS |
| GAACCTGTCTTATTTCCAGC+AGG | 0.522965 | 8.4:-3101817 | None:intergenic |
| AATGTGTCTCTTGCTTAGAA+TGG | 0.523823 | 8.4:-3103190 | None:intergenic |
| GGTCCTGCTGGAAATAAGAC+AGG | 0.532123 | 8.4:+3101814 | MS.gene57897:CDS |
| TGTTGTTTCTGACGGTGTGT+TGG | 0.536773 | 8.4:+3102131 | MS.gene57897:CDS |
| GGACAAACTCAAATTATCAA+TGG | 0.537441 | 8.4:-3105038 | None:intergenic |
| ACTCAAATTATCAATGGCAA+TGG | 0.539519 | 8.4:-3105032 | None:intergenic |
| CTTCAGATTTCAGGAATGTG+TGG | 0.546257 | 8.4:+3104922 | MS.gene57897:CDS |
| CTTCAGGAGGTCCTAGATTG+AGG | 0.547316 | 8.4:+3101752 | MS.gene57897:CDS |
| ATTTACTGTGATTCATTCTG+AGG | 0.549011 | 8.4:-3105059 | None:intergenic |
| GAGAAGAGGTTTCCGCGGTG+TGG | 0.552325 | 8.4:+3104835 | MS.gene57897:CDS |
| GAACTCCCCATTCTTCATCA+TGG | 0.554190 | 8.4:-3102999 | None:intergenic |
| TTTCCGCGGTGTGGGTCCCA+CGG | 0.558212 | 8.4:+3104844 | MS.gene57897:CDS |
| ATTTGCTAAGTATAGGCTTG+TGG | 0.560857 | 8.4:-3104748 | None:intergenic |
| CCAAGAAGTGTTGTTTCTGA+CGG | 0.562851 | 8.4:+3102123 | MS.gene57897:CDS |
| CTCTCTGATCAGAAATTGCG+TGG | 0.565696 | 8.4:+3103451 | MS.gene57897:CDS |
| ACTCCTTCATGCAGGTGGTG+GGG | 0.578093 | 8.4:+3104873 | MS.gene57897:CDS |
| GAAATCTGAAGCAACTAATG+AGG | 0.581296 | 8.4:-3104910 | None:intergenic |
| CAAATTCCGATATCCCCGAC+AGG | 0.584407 | 8.4:+3104766 | MS.gene57897:CDS |
| AGCAAAGACCTGGTGAGAAG+AGG | 0.585041 | 8.4:+3104821 | MS.gene57897:CDS |
| GTGCTCTATCTGAACTCACT+TGG | 0.585688 | 8.4:+3103163 | MS.gene57897:CDS |
| TCAATCTTCCAGTAGAAGCT+CGG | 0.588776 | 8.4:-3102053 | None:intergenic |
| GGAGAATTCCATCAAGAATG+AGG | 0.588997 | 8.4:+3104964 | MS.gene57897:CDS |
| AATTTCTCAGCCTTTCTCAG+TGG | 0.596074 | 8.4:-3101868 | None:intergenic |
| TTGGATTGTGCACCATCAGG+AGG | 0.596535 | 8.4:-3102162 | None:intergenic |
| ATCTGAAGCAACTAATGAGG+TGG | 0.598594 | 8.4:-3104907 | None:intergenic |
| GTGTTAATGTCAGCTTCAGG+AGG | 0.603358 | 8.4:+3101739 | None:intergenic |
| CTTCTACTGGAAGATTGACT+CGG | 0.603962 | 8.4:+3102058 | MS.gene57897:CDS |
| GGCTGCAGCAGAAGGGAAGG+TGG | 0.608615 | 8.4:+3104943 | MS.gene57897:CDS |
| GATTGTGCACCATCAGGAGG+AGG | 0.608674 | 8.4:-3102159 | None:intergenic |
| AGAGAGTAAGGAACTTGTAG+TGG | 0.609547 | 8.4:-3103434 | None:intergenic |
| TAACCCCACCACCTGCATGA+AGG | 0.610546 | 8.4:-3104876 | None:intergenic |
| GAATGCACGCCAAATATCAA+AGG | 0.612654 | 8.4:+3103483 | MS.gene57897:CDS |
| GGTCATATACTCCTTCATGC+AGG | 0.616386 | 8.4:+3104865 | MS.gene57897:CDS |
| CATATACTCCTTCATGCAGG+TGG | 0.620564 | 8.4:+3104868 | MS.gene57897:CDS |
| CTAATAGCTATGGTTTGACA+AGG | 0.620795 | 8.4:+3102082 | MS.gene57897:CDS |
| AAATGCATGTGATAGTGTGA+TGG | 0.629136 | 8.4:+3104997 | MS.gene57897:CDS |
| AATGTGTGGCTGCAGCAGAA+GGG | 0.629409 | 8.4:+3104936 | MS.gene57897:CDS |
| TGAAGTTATTAGCAAAGACC+TGG | 0.634551 | 8.4:+3104811 | MS.gene57897:CDS |
| GGCTGAGAAATTGGGCAAGG+AGG | 0.635303 | 8.4:+3101879 | MS.gene57897:CDS |
| GCTATGGTTTGACAAGGAAG+CGG | 0.636905 | 8.4:+3102088 | MS.gene57897:CDS |
| ATGGTGCACAATCCAAGAAG+AGG | 0.638802 | 8.4:+3102169 | MS.gene57897:CDS |
| GAGAAGAAGGTGATAACACC+AGG | 0.639020 | 8.4:+3103409 | MS.gene57897:CDS |
| TTTCCAGCAGGACCAAACAC+AGG | 0.641381 | 8.4:-3101805 | None:intergenic |
| GCGCAACACTGAAGAAACAC+TGG | 0.647990 | 8.4:-3101950 | None:intergenic |
| ATGTTGCTGACTCAGAAGCA+AGG | 0.650117 | 8.4:+3101782 | MS.gene57897:CDS |
| TCGGCTATGAAACGAGTCTG+TGG | 0.650238 | 8.4:-3102034 | None:intergenic |
| AAAGGCTGAGAAATTGGGCA+AGG | 0.650312 | 8.4:+3101876 | MS.gene57897:CDS |
| ATGAAGGAGTATATGACCGT+GGG | 0.650909 | 8.4:-3104860 | None:intergenic |
| TGTGGCTGCAGCAGAAGGGA+AGG | 0.656234 | 8.4:+3104940 | MS.gene57897:CDS |
| AATGCAACAACTGCTCATGT+CGG | 0.657461 | 8.4:-3101972 | None:intergenic |
| CATGAAGGAGTATATGACCG+TGG | 0.677378 | 8.4:-3104861 | None:intergenic |
| CTGGTGAGAAGAGGTTTCCG+CGG | 0.690988 | 8.4:+3104830 | MS.gene57897:CDS |
| ACACTGGCAGAATGTGACTG+AGG | 0.705590 | 8.4:-3101934 | None:intergenic |
| GCTTTCCATGATGAAGAATG+GGG | 0.729667 | 8.4:+3102994 | MS.gene57897:CDS |
| TGACCGTGGGACCCACACCG+CGG | 0.744972 | 8.4:-3104847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCTTTAGTTATATATT+GGG | + | chr8.4:3103601-3103620 | MS.gene57897:intron | 10.0% |
| !! | ATTTAATGATGATTTGATTA+GGG | + | chr8.4:3104359-3104378 | MS.gene57897:intron | 15.0% |
| !! | CTAAATCTTTAGTTATATAT+TGG | + | chr8.4:3103600-3103619 | MS.gene57897:intron | 15.0% |
| !! | CTTATTCACATTTATTTATA+TGG | - | chr8.4:3102602-3102621 | None:intergenic | 15.0% |
| !! | TTGAAGAAATAAAAGAAATT+TGG | - | chr8.4:3103242-3103261 | None:intergenic | 15.0% |
| !! | TTTAGATAATAAAGGTAATT+GGG | + | chr8.4:3104385-3104404 | MS.gene57897:intron | 15.0% |
| !!! | ATAACTAAAGATTTAGAATA+TGG | - | chr8.4:3103596-3103615 | None:intergenic | 15.0% |
| !! | AAGTCGAATAATTTCATAAA+AGG | + | chr8.4:3104148-3104167 | MS.gene57897:intron | 20.0% |
| !! | ACTAATATACCTTTGATATT+TGG | - | chr8.4:3103495-3103514 | None:intergenic | 20.0% |
| !! | AGTCGAATAATTTCATAAAA+GGG | + | chr8.4:3104149-3104168 | MS.gene57897:intron | 20.0% |
| !! | ATTGTGACAAATTAGAATAT+AGG | - | chr8.4:3104491-3104510 | None:intergenic | 20.0% |
| !! | CATTTAATGATGATTTGATT+AGG | + | chr8.4:3104358-3104377 | MS.gene57897:intron | 20.0% |
| !! | GTTAAAGAATCCAAATAATT+AGG | - | chr8.4:3104523-3104542 | None:intergenic | 20.0% |
| !! | GTTTAGATAATAAAGGTAAT+TGG | + | chr8.4:3104384-3104403 | MS.gene57897:intron | 20.0% |
| !! | TTTAAATTCATAACTCCATT+TGG | + | chr8.4:3102558-3102577 | MS.gene57897:intron | 20.0% |
| !!! | AAGCCTTTTTTTTCAAAAAA+GGG | - | chr8.4:3104229-3104248 | None:intergenic | 20.0% |
| !!! | AAGTAAAATCTCAATTTTCA+AGG | - | chr8.4:3102540-3102559 | None:intergenic | 20.0% |
| !!! | ATAATTACCATTGATAATGA+GGG | + | chr8.4:3104291-3104310 | MS.gene57897:intron | 20.0% |
| !!! | ATATTTCTGTATTGATCTTT+TGG | + | chr8.4:3104104-3104123 | MS.gene57897:intron | 20.0% |
| !!! | ATGATTTATTTTTTTTCCGA+AGG | - | chr8.4:3104080-3104099 | None:intergenic | 20.0% |
| !!! | TAAAAATAGTCTTGTTATGT+TGG | + | chr8.4:3103054-3103073 | MS.gene57897:intron | 20.0% |
| !!! | TAGTTGTTGTTTTTTATCAT+TGG | + | chr8.4:3102748-3102767 | MS.gene57897:intron | 20.0% |
| !!! | TATAATTACCATTGATAATG+AGG | + | chr8.4:3104290-3104309 | MS.gene57897:intron | 20.0% |
| !!! | TGATTTATTTTTTTTCCGAA+GGG | - | chr8.4:3104079-3104098 | None:intergenic | 20.0% |
| ! | AATGTCTTCTTAAGAAATCA+AGG | - | chr8.4:3102245-3102264 | None:intergenic | 25.0% |
| ! | AGATATATATTGGGTGTATA+TGG | + | chr8.4:3103690-3103709 | MS.gene57897:intron | 25.0% |
| ! | AGTTATATATTGGGTGTATA+TGG | + | chr8.4:3103610-3103629 | MS.gene57897:intron | 25.0% |
| ! | ATAATATGTTGATGTCCAAA+TGG | - | chr8.4:3102576-3102595 | None:intergenic | 25.0% |
| ! | ATGAATAAAGTGTAATTCTG+AGG | + | chr8.4:3103996-3104015 | MS.gene57897:intron | 25.0% |
| ! | CAAAGTCAAAGAGAAAAAAA+TGG | - | chr8.4:3103309-3103328 | None:intergenic | 25.0% |
| ! | CTCAAAATTAAATGAGAAGA+AGG | + | chr8.4:3103396-3103415 | MS.gene57897:CDS | 25.0% |
| ! | CTTAAGAAATCAAGGAAATT+GGG | - | chr8.4:3102237-3102256 | None:intergenic | 25.0% |
| ! | GAATTGTAGTGTTTAATGTT+AGG | - | chr8.4:3104580-3104599 | None:intergenic | 25.0% |
| ! | GTTATATATTGGGTGTATAT+GGG | + | chr8.4:3103611-3103630 | MS.gene57897:intron | 25.0% |
| ! | TCTTAAGAAATCAAGGAAAT+TGG | - | chr8.4:3102238-3102257 | None:intergenic | 25.0% |
| ! | TGAATAAAGTGTAATTCTGA+GGG | + | chr8.4:3103997-3104016 | MS.gene57897:intron | 25.0% |
| ! | TGATTTCTTAAGAAGACATT+TGG | + | chr8.4:3102245-3102264 | MS.gene57897:intron | 25.0% |
| ! | TGTACGAAAGATTAATATCA+TGG | - | chr8.4:3104458-3104477 | None:intergenic | 25.0% |
| ! | TTAAGAAATCAAGGAAATTG+GGG | - | chr8.4:3102236-3102255 | None:intergenic | 25.0% |
| ! | TTATCATTGGAGAGAAAATT+GGG | + | chr8.4:3102761-3102780 | MS.gene57897:intron | 25.0% |
| ! | TTTATCATTGGAGAGAAAAT+TGG | + | chr8.4:3102760-3102779 | MS.gene57897:intron | 25.0% |
| !! | AAATGTAGCCAATTTTATCA+TGG | + | chr8.4:3103261-3103280 | MS.gene57897:intron | 25.0% |
| !! | TATGGTTCTTTTGGTATAAT+TGG | + | chr8.4:3103708-3103727 | MS.gene57897:intron | 25.0% |
| !!! | CAAGCCTTTTTTTTCAAAAA+AGG | - | chr8.4:3104230-3104249 | None:intergenic | 25.0% |
| !!! | CTTCCCTTTTTTGAAAAAAA+AGG | + | chr8.4:3104223-3104242 | MS.gene57897:intron | 25.0% |
| !!! | GAGTGATTTTAAAACATCAT+GGG | + | chr8.4:3102267-3102286 | MS.gene57897:intron | 25.0% |
| !!! | TATTAAGTTCTGAACTACTT+TGG | + | chr8.4:3102907-3102926 | MS.gene57897:intron | 25.0% |
| !!! | TTTTTTTTCCTGTATATGTG+TGG | + | chr8.4:3102324-3102343 | MS.gene57897:intron | 25.0% |
| AATTATGATCTAACCCAAGA+GGG | - | chr8.4:3103555-3103574 | None:intergenic | 30.0% | |
| AATTGCTTTCACATATATGG+CGG | + | chr8.4:3102403-3102422 | MS.gene57897:intron | 30.0% | |
| ACCCAATATATATCTACTCA+AGG | - | chr8.4:3103685-3103704 | None:intergenic | 30.0% | |
| ACTCAAATTATCAATGGCAA+TGG | - | chr8.4:3105035-3105054 | None:intergenic | 30.0% | |
| AGAAATTTCCAGTAAAGGTA+TGG | - | chr8.4:3102865-3102884 | None:intergenic | 30.0% | |
| ATCAACAAGTAAACTTAGTC+AGG | - | chr8.4:3102955-3102974 | None:intergenic | 30.0% | |
| ATTGATCTATATCCAGTTTG+CGG | - | chr8.4:3102807-3102826 | None:intergenic | 30.0% | |
| ATTGTAGAATATACCCTCTT+GGG | + | chr8.4:3103539-3103558 | MS.gene57897:intron | 30.0% | |
| CAAATATTCATTCGTGCAAT+GGG | + | chr8.4:3102668-3102687 | MS.gene57897:intron | 30.0% | |
| CCCAATATATATCTACTCAA+GGG | - | chr8.4:3103684-3103703 | None:intergenic | 30.0% | |
| CCCTTGAGTAGATATATATT+GGG | + | chr8.4:3103681-3103700 | MS.gene57897:intron | 30.0% | |
| CTGAATTGCTTTCACATATA+TGG | + | chr8.4:3102400-3102419 | MS.gene57897:intron | 30.0% | |
| GAAAAAAATGGCTACATATG+AGG | - | chr8.4:3103297-3103316 | None:intergenic | 30.0% | |
| GAGTACTATAACAAAGATCT+CGG | - | chr8.4:3104263-3104282 | None:intergenic | 30.0% | |
| GGACAAACTCAAATTATCAA+TGG | - | chr8.4:3105041-3105060 | None:intergenic | 30.0% | |
| GGTTAGATCATAATTACTTG+TGG | + | chr8.4:3103560-3103579 | MS.gene57897:intron | 30.0% | |
| GTAGTTTAATCTCATTCATC+TGG | + | chr8.4:3102428-3102447 | MS.gene57897:intron | 30.0% | |
| TAATGATGATTTGATTAGGG+AGG | + | chr8.4:3104362-3104381 | MS.gene57897:intron | 30.0% | |
| TAATTATGATCTAACCCAAG+AGG | - | chr8.4:3103556-3103575 | None:intergenic | 30.0% | |
| TAGGGAGGTTTAGATAATAA+AGG | + | chr8.4:3104377-3104396 | MS.gene57897:intron | 30.0% | |
| TCAAATATTCATTCGTGCAA+TGG | + | chr8.4:3102667-3102686 | MS.gene57897:intron | 30.0% | |
| TCAACAAGTAAACTTAGTCA+GGG | - | chr8.4:3102954-3102973 | None:intergenic | 30.0% | |
| TCCCTTGAGTAGATATATAT+TGG | + | chr8.4:3103680-3103699 | MS.gene57897:intron | 30.0% | |
| TGATGTGAGACCTAATTATT+TGG | + | chr8.4:3104510-3104529 | MS.gene57897:intron | 30.0% | |
| TGTAGAGAAATTTCCAGTAA+AGG | - | chr8.4:3102870-3102889 | None:intergenic | 30.0% | |
| TTAAACACATAATTATGCCC+CGG | - | chr8.4:3102293-3102312 | None:intergenic | 30.0% | |
| ! | AGCTCTCTCAAGATTTTTAA+CGG | + | chr8.4:3103795-3103814 | MS.gene57897:intron | 30.0% |
| ! | ATCCTCCATTAAATTTTGCT+TGG | + | chr8.4:3103092-3103111 | MS.gene57897:intron | 30.0% |
| ! | ATGGGTTCTTTTGGTATAAT+TGG | + | chr8.4:3103629-3103648 | MS.gene57897:intron | 30.0% |
| ! | CTAGTTCTCATTCATTCATA+TGG | - | chr8.4:3102842-3102861 | None:intergenic | 30.0% |
| ! | TAAGCAAGAGACACATTTTT+AGG | + | chr8.4:3103196-3103215 | MS.gene57897:CDS | 30.0% |
| ! | TAATAAAGGTAATTGGGTTG+TGG | + | chr8.4:3104391-3104410 | MS.gene57897:intron | 30.0% |
| ! | TGGGTTCTTTTGGTATAATT+GGG | + | chr8.4:3103630-3103649 | MS.gene57897:intron | 30.0% |
| ! | TTGCTAATAACTTCAGCTTT+TGG | - | chr8.4:3104806-3104825 | None:intergenic | 30.0% |
| !! | AATAGTCTTGTTATGTTGGT+TGG | + | chr8.4:3103058-3103077 | MS.gene57897:intron | 30.0% |
| !! | ATTGATAATGAGGGACTAAT+GGG | + | chr8.4:3104300-3104319 | MS.gene57897:intron | 30.0% |
| !! | TATCGGAATTTGCTAAGTAT+AGG | - | chr8.4:3104758-3104777 | None:intergenic | 30.0% |
| !! | TTAATTTGCATGACCCATAT+GGG | + | chr8.4:3104427-3104446 | MS.gene57897:intron | 30.0% |
| !! | TTTAATTTGCATGACCCATA+TGG | + | chr8.4:3104426-3104445 | MS.gene57897:intron | 30.0% |
| !!! | GGAGTGATTTTAAAACATCA+TGG | + | chr8.4:3102266-3102285 | MS.gene57897:intron | 30.0% |
| !!! | TTCAGCTTTTGGTGTTTTAA+CGG | - | chr8.4:3104795-3104814 | None:intergenic | 30.0% |
| !!! | TTTAATTTTGAGACAGCAAC+TGG | - | chr8.4:3103388-3103407 | None:intergenic | 30.0% |
| AAATGGGGTAAAACATGCAA+TGG | + | chr8.4:3102701-3102720 | MS.gene57897:intron | 35.0% | |
| AATGTGTCTCTTGCTTAGAA+TGG | - | chr8.4:3103193-3103212 | None:intergenic | 35.0% | |
| AATTGTGCAGAGTGCAATTA+TGG | - | chr8.4:3104620-3104639 | None:intergenic | 35.0% | |
| ACATTCATAGACCTCAATCT+AGG | - | chr8.4:3101766-3101785 | None:intergenic | 35.0% | |
| ACTATGAACTATCCTACCAA+AGG | - | chr8.4:3102357-3102376 | None:intergenic | 35.0% | |
| ATCACACTATCACATGCATT+TGG | - | chr8.4:3104998-3105017 | None:intergenic | 35.0% | |
| ATGCAAATTAAATGAGGACC+AGG | - | chr8.4:3104418-3104437 | None:intergenic | 35.0% | |
| ATGGGCTTAATAACATGTCT+AGG | + | chr8.4:3103913-3103932 | MS.gene57897:intron | 35.0% | |
| ATTGTGTCATACTCTACTCA+AGG | - | chr8.4:3103766-3103785 | None:intergenic | 35.0% | |
| CAACTATAGCCCATAATAAG+AGG | - | chr8.4:3102734-3102753 | None:intergenic | 35.0% | |
| CAATTTCTGATCAGAGAGTA+AGG | - | chr8.4:3103449-3103468 | None:intergenic | 35.0% | |
| CATTAGTCCCTCATTATCAA+TGG | - | chr8.4:3104301-3104320 | None:intergenic | 35.0% | |
| CATTAGTTGCTTCAGATTTC+AGG | + | chr8.4:3104913-3104932 | MS.gene57897:CDS | 35.0% | |
| CATTGTAGAATATACCCTCT+TGG | + | chr8.4:3103538-3103557 | MS.gene57897:intron | 35.0% | |
| CTAATAGCTATGGTTTGACA+AGG | + | chr8.4:3102082-3102101 | MS.gene57897:CDS | 35.0% | |
| GAGTGCCAAGCAAAATTTAA+TGG | - | chr8.4:3103100-3103119 | None:intergenic | 35.0% | |
| GGACATGTACCTCTTATTAT+GGG | + | chr8.4:3102722-3102741 | MS.gene57897:intron | 35.0% | |
| GGTCATTCGACAATTACATT+TGG | + | chr8.4:3104714-3104733 | MS.gene57897:CDS | 35.0% | |
| GTATATAGTACCACCTAGAA+CGG | - | chr8.4:3103958-3103977 | None:intergenic | 35.0% | |
| TCATGGAAAGCAGCATAATA+TGG | - | chr8.4:3102985-3103004 | None:intergenic | 35.0% | |
| TCTCATTCATTCATATGGAG+TGG | - | chr8.4:3102837-3102856 | None:intergenic | 35.0% | |
| TGAAGTTATTAGCAAAGACC+TGG | + | chr8.4:3104811-3104830 | MS.gene57897:CDS | 35.0% | |
| TGAGTAGAGTATGACACAAT+GGG | + | chr8.4:3103766-3103785 | MS.gene57897:intron | 35.0% | |
| TGCCAAGCAAAATTTAATGG+AGG | - | chr8.4:3103097-3103116 | None:intergenic | 35.0% | |
| TGCTTTCCATGATGAAGAAT+GGG | + | chr8.4:3102993-3103012 | MS.gene57897:CDS | 35.0% | |
| TGGACATGTACCTCTTATTA+TGG | + | chr8.4:3102721-3102740 | MS.gene57897:intron | 35.0% | |
| TGGGTCATGCAAATTAAATG+AGG | - | chr8.4:3104424-3104443 | None:intergenic | 35.0% | |
| TGGTAGGATAGTTCATAGTT+CGG | + | chr8.4:3102358-3102377 | MS.gene57897:intron | 35.0% | |
| TGTTAACAAAGTCCTTTGCA+GGG | + | chr8.4:3103342-3103361 | MS.gene57897:intron | 35.0% | |
| TTCGACTTACTTTCCTAGTT+AGG | - | chr8.4:3104136-3104155 | None:intergenic | 35.0% | |
| TTGAGTAGAGTATGACACAA+TGG | + | chr8.4:3103765-3103784 | MS.gene57897:intron | 35.0% | |
| TTGTGTCATACTCTACTCAA+GGG | - | chr8.4:3103765-3103784 | None:intergenic | 35.0% | |
| TTGTTAACAAAGTCCTTTGC+AGG | + | chr8.4:3103341-3103360 | MS.gene57897:intron | 35.0% | |
| ! | AAAGTGTAATTCTGAGGGTT+TGG | + | chr8.4:3104002-3104021 | MS.gene57897:intron | 35.0% |
| ! | AAATGCATGTGATAGTGTGA+TGG | + | chr8.4:3104997-3105016 | MS.gene57897:CDS | 35.0% |
| ! | AAGTGTAATTCTGAGGGTTT+GGG | + | chr8.4:3104003-3104022 | MS.gene57897:intron | 35.0% |
| ! | AATGGGTTTGTAGCCAAAAT+GGG | + | chr8.4:3102685-3102704 | MS.gene57897:intron | 35.0% |
| ! | AGTTCGGTTCATGATACTTT+TGG | + | chr8.4:3102374-3102393 | MS.gene57897:intron | 35.0% |
| ! | ATATCATGGTTTGTCCCATA+TGG | - | chr8.4:3104444-3104463 | None:intergenic | 35.0% |
| ! | ATTTGCTAAGTATAGGCTTG+TGG | - | chr8.4:3104751-3104770 | None:intergenic | 35.0% |
| ! | CTTGTTATGTTGGTTGGAAA+AGG | + | chr8.4:3103064-3103083 | MS.gene57897:intron | 35.0% |
| ! | GAAATCTGAAGCAACTAATG+AGG | - | chr8.4:3104913-3104932 | None:intergenic | 35.0% |
| ! | GAGGGTATATTCTACAATGA+AGG | - | chr8.4:3103537-3103556 | None:intergenic | 35.0% |
| ! | TATCATGGTTTGTCCCATAT+GGG | - | chr8.4:3104443-3104462 | None:intergenic | 35.0% |
| ! | TCTCATTCATCTGGTTTCAT+TGG | + | chr8.4:3102437-3102456 | MS.gene57897:intron | 35.0% |
| ! | TTAACGGTGCTTCATTTTCA+GGG | + | chr8.4:3103811-3103830 | MS.gene57897:intron | 35.0% |
| ! | TTGCATGTTTTACCCCATTT+TGG | - | chr8.4:3102701-3102720 | None:intergenic | 35.0% |
| ! | TTGGGTGTATATGGTTCTTT+TGG | + | chr8.4:3103699-3103718 | MS.gene57897:intron | 35.0% |
| ! | TTTAACGGTGCTTCATTTTC+AGG | + | chr8.4:3103810-3103829 | MS.gene57897:intron | 35.0% |
| !! | AGAAGCATCTTTCTTCTCTT+TGG | - | chr8.4:3101914-3101933 | None:intergenic | 35.0% |
| !! | CATTGATAATGAGGGACTAA+TGG | + | chr8.4:3104299-3104318 | MS.gene57897:intron | 35.0% |
| !!! | ATTTTAAAACATCATGGGCC+GGG | + | chr8.4:3102272-3102291 | MS.gene57897:intron | 35.0% |
| !!! | GATTTTAAAACATCATGGGC+CGG | + | chr8.4:3102271-3102290 | MS.gene57897:intron | 35.0% |
| !!! | TCAGCTTTTGGTGTTTTAAC+GGG | - | chr8.4:3104794-3104813 | None:intergenic | 35.0% |
| AATGCAACAACTGCTCATGT+CGG | - | chr8.4:3101975-3101994 | None:intergenic | 40.0% | |
| AATTTCTCAGCCTTTCTCAG+TGG | - | chr8.4:3101871-3101890 | None:intergenic | 40.0% | |
| ACATACTTGTCGTCATGTAC+TGG | - | chr8.4:3103024-3103043 | None:intergenic | 40.0% | |
| ACTCTGCACAATTTGCATCA+CGG | + | chr8.4:3104627-3104646 | MS.gene57897:intron | 40.0% | |
| ACTGAGAAAGGCTGAGAAAT+TGG | + | chr8.4:3101870-3101889 | MS.gene57897:CDS | 40.0% | |
| AGAACTAGCCATACCTTTAC+TGG | + | chr8.4:3102854-3102873 | MS.gene57897:intron | 40.0% | |
| AGAGAGTAAGGAACTTGTAG+TGG | - | chr8.4:3103437-3103456 | None:intergenic | 40.0% | |
| ATAATTGGGTATCCTTCACC+CGG | + | chr8.4:3103644-3103663 | MS.gene57897:intron | 40.0% | |
| ATGGGTTTGTAGCCAAAATG+GGG | + | chr8.4:3102686-3102705 | MS.gene57897:intron | 40.0% | |
| CACATGTAGGAAACTGTTTG+AGG | + | chr8.4:3103125-3103144 | MS.gene57897:intron | 40.0% | |
| CTGAGAAAGGCTGAGAAATT+GGG | + | chr8.4:3101871-3101890 | MS.gene57897:CDS | 40.0% | |
| CTGCTTTCCATGATGAAGAA+TGG | + | chr8.4:3102992-3103011 | MS.gene57897:CDS | 40.0% | |
| CTTCAGATTTCAGGAATGTG+TGG | + | chr8.4:3104922-3104941 | MS.gene57897:CDS | 40.0% | |
| CTTCTACTGGAAGATTGACT+CGG | + | chr8.4:3102058-3102077 | MS.gene57897:CDS | 40.0% | |
| GAAATCAAGGAAATTGGGGA+AGG | - | chr8.4:3102232-3102251 | None:intergenic | 40.0% | |
| GAATGCACGCCAAATATCAA+AGG | + | chr8.4:3103483-3103502 | MS.gene57897:CDS | 40.0% | |
| GAGTGGAACAAACCAGTATT+GGG | - | chr8.4:3102210-3102229 | None:intergenic | 40.0% | |
| GATGAATGCTTCGTGTTCTT+CGG | + | chr8.4:3102005-3102024 | MS.gene57897:CDS | 40.0% | |
| GCTTTCCATGATGAAGAATG+GGG | + | chr8.4:3102994-3103013 | MS.gene57897:CDS | 40.0% | |
| GGAGAATTCCATCAAGAATG+AGG | + | chr8.4:3104964-3104983 | MS.gene57897:CDS | 40.0% | |
| GTCTCTTCCAAATTAACCAG+AGG | - | chr8.4:3103855-3103874 | None:intergenic | 40.0% | |
| TCAATCTTCCAGTAGAAGCT+CGG | - | chr8.4:3102056-3102075 | None:intergenic | 40.0% | |
| TGGCACTCTTTATCACATGT+AGG | + | chr8.4:3103112-3103131 | MS.gene57897:intron | 40.0% | |
| TTGAGCATCCTCATTCTTGA+TGG | - | chr8.4:3104975-3104994 | None:intergenic | 40.0% | |
| ! | AGTGTAATTCTGAGGGTTTG+GGG | + | chr8.4:3104004-3104023 | MS.gene57897:intron | 40.0% |
| ! | ATCTGAAGCAACTAATGAGG+TGG | - | chr8.4:3104910-3104929 | None:intergenic | 40.0% |
| ! | ATGAAGGAGTATATGACCGT+GGG | - | chr8.4:3104863-3104882 | None:intergenic | 40.0% |
| ! | CAATGGGTTTGTAGCCAAAA+TGG | + | chr8.4:3102684-3102703 | MS.gene57897:intron | 40.0% |
| ! | CGTTGCAACTAACTTTTTGC+AGG | + | chr8.4:3104660-3104679 | MS.gene57897:intron | 40.0% |
| ! | CTGGTTAATTTGGAAGAGAC+CGG | + | chr8.4:3103855-3103874 | MS.gene57897:intron | 40.0% |
| ! | GTAGCCAATTTTATCATGGC+TGG | + | chr8.4:3103265-3103284 | MS.gene57897:intron | 40.0% |
| ! | TGGGTGTATATGGGTTCTTT+TGG | + | chr8.4:3103620-3103639 | MS.gene57897:intron | 40.0% |
| !! | CCAAGAAGTGTTGTTTCTGA+CGG | + | chr8.4:3102123-3102142 | MS.gene57897:CDS | 40.0% |
| !! | CTTTTGGAGAACACCTAACT+AGG | + | chr8.4:3104120-3104139 | MS.gene57897:intron | 40.0% |
| !! | TTGACTCGGTCTAATAGCTA+TGG | + | chr8.4:3102072-3102091 | MS.gene57897:CDS | 40.0% |
| !!! | TTTTAAAACATCATGGGCCG+GGG | + | chr8.4:3102273-3102292 | MS.gene57897:intron | 40.0% |
| AAAGGCTGAGAAATTGGGCA+AGG | + | chr8.4:3101876-3101895 | MS.gene57897:CDS | 45.0% | |
| AAGGAACTTGTAGTGGTTCC+TGG | - | chr8.4:3103430-3103449 | None:intergenic | 45.0% | |
| AAGGGATTTCTCTGCAGTTC+CGG | - | chr8.4:3103666-3103685 | None:intergenic | 45.0% | |
| ACCCAAACTCTACTATGACC+TGG | - | chr8.4:3104697-3104716 | None:intergenic | 45.0% | |
| ATGGTGCACAATCCAAGAAG+AGG | + | chr8.4:3102169-3102188 | MS.gene57897:CDS | 45.0% | |
| CAAACTGGCAACACATCAAG+CGG | - | chr8.4:3104048-3104067 | None:intergenic | 45.0% | |
| CACATACCAGCTAAGCATGT+TGG | - | chr8.4:3104549-3104568 | None:intergenic | 45.0% | |
| CAGCAAAAACTTCCCTGCAA+AGG | - | chr8.4:3103357-3103376 | None:intergenic | 45.0% | |
| CATATACTCCTTCATGCAGG+TGG | + | chr8.4:3104868-3104887 | MS.gene57897:CDS | 45.0% | |
| CATCTCATCCAAACGCTCTT+GGG | + | chr8.4:3103881-3103900 | MS.gene57897:intron | 45.0% | |
| CCAAATTAACCAGAGGCCAT+GGG | - | chr8.4:3103848-3103867 | None:intergenic | 45.0% | |
| CCGTCAGAAACAACACTTCT+TGG | - | chr8.4:3102126-3102145 | None:intergenic | 45.0% | |
| CTCTCTGATCAGAAATTGCG+TGG | + | chr8.4:3103451-3103470 | MS.gene57897:CDS | 45.0% | |
| CTTGATGTGTTGCCAGTTTG+GGG | + | chr8.4:3104048-3104067 | MS.gene57897:intron | 45.0% | |
| GAACTCCCCATTCTTCATCA+TGG | - | chr8.4:3103002-3103021 | None:intergenic | 45.0% | |
| GAGAAGAAGGTGATAACACC+AGG | + | chr8.4:3103409-3103428 | MS.gene57897:CDS | 45.0% | |
| GCAGCCAGCCATGATAAAAT+TGG | - | chr8.4:3103272-3103291 | None:intergenic | 45.0% | |
| GCCAGGTCATAGTAGAGTTT+GGG | + | chr8.4:3104693-3104712 | MS.gene57897:intron | 45.0% | |
| GCGTTTGGATGAGATGATTC+CGG | - | chr8.4:3103877-3103896 | None:intergenic | 45.0% | |
| GCTATGGTTTGACAAGGAAG+CGG | + | chr8.4:3102088-3102107 | MS.gene57897:CDS | 45.0% | |
| GCTTGATGTGTTGCCAGTTT+GGG | + | chr8.4:3104047-3104066 | MS.gene57897:intron | 45.0% | |
| GGAGTGGAACAAACCAGTAT+TGG | - | chr8.4:3102211-3102230 | None:intergenic | 45.0% | |
| GGATTACTCTCTGCAGTTGT+GGG | - | chr8.4:3103744-3103763 | None:intergenic | 45.0% | |
| GGTCATATACTCCTTCATGC+AGG | + | chr8.4:3104865-3104884 | MS.gene57897:CDS | 45.0% | |
| GTGATGTTACTAGCCGTTCT+AGG | + | chr8.4:3103942-3103961 | MS.gene57897:intron | 45.0% | |
| GTGCTCTATCTGAACTCACT+TGG | + | chr8.4:3103163-3103182 | MS.gene57897:CDS | 45.0% | |
| TCATCTCATCCAAACGCTCT+TGG | + | chr8.4:3103880-3103899 | MS.gene57897:intron | 45.0% | |
| TCCAAATTAACCAGAGGCCA+TGG | - | chr8.4:3103849-3103868 | None:intergenic | 45.0% | |
| TGCCAGGTCATAGTAGAGTT+TGG | + | chr8.4:3104692-3104711 | MS.gene57897:intron | 45.0% | |
| TGCTTCAAAGCCACTGAGAA+AGG | + | chr8.4:3101858-3101877 | MS.gene57897:CDS | 45.0% | |
| TGTCTCTTGCTTAGAATGGC+TGG | - | chr8.4:3103189-3103208 | None:intergenic | 45.0% | |
| TTCTTGGATTGTGCACCATC+AGG | - | chr8.4:3102168-3102187 | None:intergenic | 45.0% | |
| TTGATGTGTTGCCAGTTTGG+GGG | + | chr8.4:3104049-3104068 | MS.gene57897:intron | 45.0% | |
| TTTCATAGCCGAGCTTCTAC+TGG | + | chr8.4:3102045-3102064 | MS.gene57897:CDS | 45.0% | |
| ! | AAGAAGTACATGCCGCAAAC+TGG | + | chr8.4:3102792-3102811 | MS.gene57897:intron | 45.0% |
| ! | AATCCAAGAAGAGGTGTGCT+TGG | + | chr8.4:3102178-3102197 | MS.gene57897:CDS | 45.0% |
| ! | ATGTTACTAGCCGTTCTAGG+TGG | + | chr8.4:3103945-3103964 | MS.gene57897:intron | 45.0% |
| ! | ATTGGGCAAGGAGGTTGATT+TGG | + | chr8.4:3101888-3101907 | MS.gene57897:CDS | 45.0% |
| ! | CATGAAGGAGTATATGACCG+TGG | - | chr8.4:3104864-3104883 | None:intergenic | 45.0% |
| ! | TTGCAGGTTTTACTGATGCC+AGG | + | chr8.4:3104676-3104695 | MS.gene57897:intron | 45.0% |
| !! | ATGTTGCTGACTCAGAAGCA+AGG | + | chr8.4:3101782-3101801 | MS.gene57897:CDS | 45.0% |
| !! | GAACCTGTCTTATTTCCAGC+AGG | - | chr8.4:3101820-3101839 | None:intergenic | 45.0% |
| !! | GCTCTTGGGTTGGTGTATAT+GGG | + | chr8.4:3103895-3103914 | MS.gene57897:intron | 45.0% |
| !! | TGTTGTTTCTGACGGTGTGT+TGG | + | chr8.4:3102131-3102150 | MS.gene57897:CDS | 45.0% |
| !!! | GTGTTTTAACGGGAACCTGT+CGG | - | chr8.4:3104784-3104803 | None:intergenic | 45.0% |
| !!! | TGTTTTAACGGGAACCTGTC+GGG | - | chr8.4:3104783-3104802 | None:intergenic | 45.0% |
| AACCAGCCAACATGCTTAGC+TGG | + | chr8.4:3104540-3104559 | MS.gene57897:intron | 50.0% | |
| AATGTGTGGCTGCAGCAGAA+GGG | + | chr8.4:3104936-3104955 | MS.gene57897:CDS | 50.0% | |
| ACACTGGCAGAATGTGACTG+AGG | - | chr8.4:3101937-3101956 | None:intergenic | 50.0% | |
| AGCAAAGACCTGGTGAGAAG+AGG | + | chr8.4:3104821-3104840 | MS.gene57897:CDS | 50.0% | |
| AGGGATTTCTCTGCAGTTCC+GGG | - | chr8.4:3103665-3103684 | None:intergenic | 50.0% | |
| ATACTCCTTCATGCAGGTGG+TGG | + | chr8.4:3104871-3104890 | MS.gene57897:CDS | 50.0% | |
| CAAATTCCGATATCCCCGAC+AGG | + | chr8.4:3104766-3104785 | MS.gene57897:CDS | 50.0% | |
| CAAGGAAATTGGGGAAGGAG+TGG | - | chr8.4:3102227-3102246 | None:intergenic | 50.0% | |
| CAGGGTTGGATTTGAACCCA+TGG | + | chr8.4:3103829-3103848 | MS.gene57897:intron | 50.0% | |
| CCCATGGCCTCTGGTTAATT+TGG | + | chr8.4:3103845-3103864 | MS.gene57897:intron | 50.0% | |
| CGCTTGATGTGTTGCCAGTT+TGG | + | chr8.4:3104046-3104065 | MS.gene57897:intron | 50.0% | |
| CTTCAGGAGGTCCTAGATTG+AGG | + | chr8.4:3101752-3101771 | MS.gene57897:CDS | 50.0% | |
| GATCCAAGCACACCTCTTCT+TGG | - | chr8.4:3102184-3102203 | None:intergenic | 50.0% | |
| GCACACAGCCACACATATAC+AGG | - | chr8.4:3102335-3102354 | None:intergenic | 50.0% | |
| GCGCAACACTGAAGAAACAC+TGG | - | chr8.4:3101953-3101972 | None:intergenic | 50.0% | |
| GCTTGGATCACTCCCAATAC+TGG | + | chr8.4:3102195-3102214 | MS.gene57897:CDS | 50.0% | |
| GGGATTACTCTCTGCAGTTG+TGG | - | chr8.4:3103745-3103764 | None:intergenic | 50.0% | |
| GGTCCTGCTGGAAATAAGAC+AGG | + | chr8.4:3101814-3101833 | MS.gene57897:CDS | 50.0% | |
| TACCAGCTAAGCATGTTGGC+TGG | - | chr8.4:3104545-3104564 | None:intergenic | 50.0% | |
| TACTCCTTCATGCAGGTGGT+GGG | + | chr8.4:3104872-3104891 | MS.gene57897:CDS | 50.0% | |
| TATGTGTGGCTGTGTGCCTT+TGG | + | chr8.4:3102338-3102357 | MS.gene57897:intron | 50.0% | |
| TCAGAAGCAAGGCCTGTGTT+TGG | + | chr8.4:3101793-3101812 | MS.gene57897:CDS | 50.0% | |
| TCATCCAAACGCTCTTGGGT+TGG | + | chr8.4:3103885-3103904 | MS.gene57897:intron | 50.0% | |
| TCGGCTATGAAACGAGTCTG+TGG | - | chr8.4:3102037-3102056 | None:intergenic | 50.0% | |
| TTGGAATCTCCTCCTCCTGA+TGG | + | chr8.4:3102150-3102169 | MS.gene57897:CDS | 50.0% | |
| TTGGATTGTGCACCATCAGG+AGG | - | chr8.4:3102165-3102184 | None:intergenic | 50.0% | |
| TTTCCAGCAGGACCAAACAC+AGG | - | chr8.4:3101808-3101827 | None:intergenic | 50.0% | |
| ! | AGGTAATTGGGTTGTGGTCC+TGG | + | chr8.4:3104397-3104416 | MS.gene57897:intron | 50.0% |
| ! | CAGTTTGGGGGTTTTCCCTT+CGG | + | chr8.4:3104061-3104080 | MS.gene57897:intron | 50.0% |
| !! | CGCTCTTGGGTTGGTGTATA+TGG | + | chr8.4:3103894-3103913 | MS.gene57897:intron | 50.0% |
| !! | CGGTGCTTCATTTTCAGGGT+TGG | + | chr8.4:3103815-3103834 | MS.gene57897:intron | 50.0% |
| !! | GTTTTAACGGGAACCTGTCG+GGG | - | chr8.4:3104782-3104801 | None:intergenic | 50.0% |
| !! | TACACCAACCCAAGAGCGTT+TGG | - | chr8.4:3103892-3103911 | None:intergenic | 50.0% |
| ACTCCTTCATGCAGGTGGTG+GGG | + | chr8.4:3104873-3104892 | MS.gene57897:CDS | 55.0% | |
| AGAAGAGGTTTCCGCGGTGT+GGG | + | chr8.4:3104836-3104855 | MS.gene57897:CDS | 55.0% | |
| CGAAGGGAAAACCCCCAAAC+TGG | - | chr8.4:3104063-3104082 | None:intergenic | 55.0% | |
| CTGGTGAGAAGAGGTTTCCG+CGG | + | chr8.4:3104830-3104849 | MS.gene57897:CDS | 55.0% | |
| GAATGTGTGGCTGCAGCAGA+AGG | + | chr8.4:3104935-3104954 | MS.gene57897:CDS | 55.0% | |
| GATTGTGCACCATCAGGAGG+AGG | - | chr8.4:3102162-3102181 | None:intergenic | 55.0% | |
| GGATTTGAACCCATGGCCTC+TGG | + | chr8.4:3103836-3103855 | MS.gene57897:intron | 55.0% | |
| GGCTGAGAAATTGGGCAAGG+AGG | + | chr8.4:3101879-3101898 | MS.gene57897:CDS | 55.0% | |
| TAACCCCACCACCTGCATGA+AGG | - | chr8.4:3104879-3104898 | None:intergenic | 55.0% | |
| TCTCTGCAGTTGTGGGCGAA+GGG | - | chr8.4:3103737-3103756 | None:intergenic | 55.0% | |
| TGTGGCTGTGTGCCTTTGGT+AGG | + | chr8.4:3102342-3102361 | MS.gene57897:intron | 55.0% | |
| TTCTCTGCAGTTCCGGGTGA+AGG | - | chr8.4:3103659-3103678 | None:intergenic | 55.0% | |
| AGGCCTGTGTTTGGTCCTGC+TGG | + | chr8.4:3101802-3101821 | MS.gene57897:CDS | 60.0% | |
| CGCGGAAACCTCTTCTCACC+AGG | - | chr8.4:3104832-3104851 | None:intergenic | 60.0% | |
| CGGGAACCTGTCGGGGATAT+CGG | - | chr8.4:3104775-3104794 | None:intergenic | 60.0% | |
| CTCTCTGCAGTTGTGGGCGA+AGG | - | chr8.4:3103738-3103757 | None:intergenic | 60.0% | |
| GAGAAGAGGTTTCCGCGGTG+TGG | + | chr8.4:3104835-3104854 | MS.gene57897:CDS | 60.0% | |
| TGTGGCTGCAGCAGAAGGGA+AGG | + | chr8.4:3104940-3104959 | MS.gene57897:CDS | 60.0% | |
| GGCTGCAGCAGAAGGGAAGG+TGG | + | chr8.4:3104943-3104962 | MS.gene57897:CDS | 65.0% | |
| TTTCCGCGGTGTGGGTCCCA+CGG | + | chr8.4:3104844-3104863 | MS.gene57897:CDS | 65.0% | |
| TGACCGTGGGACCCACACCG+CGG | - | chr8.4:3104850-3104869 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3101745 | 3105069 | 3101745 | ID=MS.gene57897 |
| chr8.4 | mRNA | 3101745 | 3105069 | 3101745 | ID=MS.gene57897.t1;Parent=MS.gene57897 |
| chr8.4 | exon | 3101745 | 3102216 | 3101745 | ID=MS.gene57897.t1.exon1;Parent=MS.gene57897.t1 |
| chr8.4 | CDS | 3101745 | 3102216 | 3101745 | ID=cds.MS.gene57897.t1;Parent=MS.gene57897.t1 |
| chr8.4 | exon | 3102980 | 3103037 | 3102980 | ID=MS.gene57897.t1.exon2;Parent=MS.gene57897.t1 |
| chr8.4 | CDS | 3102980 | 3103037 | 3102980 | ID=cds.MS.gene57897.t1;Parent=MS.gene57897.t1 |
| chr8.4 | exon | 3103134 | 3103217 | 3103134 | ID=MS.gene57897.t1.exon3;Parent=MS.gene57897.t1 |
| chr8.4 | CDS | 3103134 | 3103217 | 3103134 | ID=cds.MS.gene57897.t1;Parent=MS.gene57897.t1 |
| chr8.4 | exon | 3103363 | 3103504 | 3103363 | ID=MS.gene57897.t1.exon4;Parent=MS.gene57897.t1 |
| chr8.4 | CDS | 3103363 | 3103504 | 3103363 | ID=cds.MS.gene57897.t1;Parent=MS.gene57897.t1 |
| chr8.4 | exon | 3104698 | 3105069 | 3104698 | ID=MS.gene57897.t1.exon5;Parent=MS.gene57897.t1 |
| chr8.4 | CDS | 3104698 | 3105069 | 3104698 | ID=cds.MS.gene57897.t1;Parent=MS.gene57897.t1 |
| Gene Sequence |
| Protein sequence |
