Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57970.t1 | XP_003610256.1 | 99.2 | 611 | 4 | 1 | 1 | 611 | 31 | 640 | 6.60E-277 | 963 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57970.t1 | Q8VYT3 | 73.7 | 616 | 149 | 6 | 2 | 611 | 40 | 648 | 4.9e-196 | 685.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57970.t1 | E2IXG5 | 99.2 | 611 | 4 | 1 | 1 | 611 | 31 | 640 | 4.8e-277 | 963.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene57970 | 0.800445 | 1.44E-48 | -1.69E-46 |
| MS.gene051248 | MS.gene57970 | 0.825186 | 5.38E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 135 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAATTTGCTTCGCTTAAT+TGG | 0.064953 | 8.4:+4995607 | MS.gene57970:CDS |
| TCTGATTCCTCCCTTGTTAT+TGG | 0.116697 | 8.4:+4993797 | MS.gene57970:CDS |
| AGCAGTTACTTCCATAATTA+TGG | 0.157870 | 8.4:-4997640 | None:intergenic |
| GAGGCTATCGTTGGTGATTT+TGG | 0.193677 | 8.4:+4996544 | MS.gene57970:CDS |
| TTAGGAAATCTCAAACATTT+TGG | 0.218050 | 8.4:+4995388 | MS.gene57970:CDS |
| AAGAGCAATTGCTAGTTTCT+TGG | 0.229169 | 8.4:-4995142 | None:intergenic |
| ACATCTCTGTGTATGATCTT+TGG | 0.241214 | 8.4:-4996487 | None:intergenic |
| TACTGTTGTTGCTGTGACTA+TGG | 0.245986 | 8.4:-4997667 | None:intergenic |
| ATACTCGGTGCTGGAGGTTT+TGG | 0.252430 | 8.4:+4995457 | MS.gene57970:CDS |
| ATTATTATTCTAATTTATCT+AGG | 0.262006 | 8.4:-4997827 | None:intergenic |
| AGAAAAGAAGGTTGAAGTTT+TGG | 0.284583 | 8.4:+4997457 | MS.gene57970:CDS |
| TACTCCTAATGACAAAATTC+TGG | 0.299554 | 8.4:+4995639 | MS.gene57970:CDS |
| GGAATGACAGCCCTTGAGTT+TGG | 0.305215 | 8.4:+4996721 | MS.gene57970:CDS |
| AAAAGCTGCTAATGTGCTTC+TGG | 0.309989 | 8.4:+4996510 | MS.gene57970:CDS |
| GCCGGTGAGCTGTCAAATAT+TGG | 0.323372 | 8.4:-4997553 | None:intergenic |
| TTCGGAAGGTTTCCAAGTTC+CGG | 0.324912 | 8.4:-4994360 | None:intergenic |
| CATGATCGTTCAAGCATGTT+TGG | 0.327120 | 8.4:+4997743 | MS.gene57970:CDS |
| CTCTGTTGACCCTTGTAGTT+GGG | 0.329974 | 8.4:+4993757 | MS.gene57970:CDS |
| CTCTTATTAGAGCTTATAAC+TGG | 0.333241 | 8.4:+4996700 | MS.gene57970:CDS |
| GAGGTGCTTACACAAATTAA+TGG | 0.333580 | 8.4:-4994952 | None:intergenic |
| CACACAATGTATTAAGCAAC+TGG | 0.364302 | 8.4:+4993726 | MS.gene57970:CDS |
| TGATGATGATGATCAGTCTT+TGG | 0.364685 | 8.4:+4997778 | MS.gene57970:CDS |
| TGGGCATCGACCCATAATTA+TGG | 0.366709 | 8.4:+4997629 | MS.gene57970:CDS |
| GAATGACAGCCCTTGAGTTT+GGG | 0.374182 | 8.4:+4996722 | MS.gene57970:CDS |
| GTTTACCCTTACATGTCTAA+TGG | 0.377250 | 8.4:+4995661 | MS.gene57970:CDS |
| TAGGAAAACCCGCTTTAGAT+TGG | 0.378603 | 8.4:+4996398 | MS.gene57970:intron |
| GTTACAGTTCCAAACAGAAT+TGG | 0.387136 | 8.4:+4995561 | MS.gene57970:CDS |
| CTGAACAACAATAGCTTGTC+TGG | 0.389744 | 8.4:+4994611 | MS.gene57970:CDS |
| GAAGAGGCTGTTGTTAGCTT+AGG | 0.392534 | 8.4:+4995370 | MS.gene57970:CDS |
| AGAAACTAGCAATTGCTCTT+GGG | 0.394218 | 8.4:+4995145 | MS.gene57970:CDS |
| ACCTCTATTGAAGGCTGCTC+TGG | 0.395123 | 8.4:+4994970 | MS.gene57970:CDS |
| AGATCTAAAGTTTGAAGCTT+CGG | 0.399992 | 8.4:-4994378 | None:intergenic |
| TCTCTGTTGACCCTTGTAGT+TGG | 0.400018 | 8.4:+4993756 | MS.gene57970:CDS |
| TTCAATTGATTGAGTGAAGA+TGG | 0.402418 | 8.4:-4994429 | None:intergenic |
| GATAGCAATTGGAGCTGCTC+GGG | 0.404104 | 8.4:+4996435 | MS.gene57970:CDS |
| CATGGAGCCATCTTGTATAT+TGG | 0.405305 | 8.4:+4995237 | MS.gene57970:CDS |
| TGGGAAAACCTTGAATCAAA+AGG | 0.406957 | 8.4:+4996741 | MS.gene57970:CDS |
| AGGTGCTTACACAAATTAAT+GGG | 0.408951 | 8.4:-4994951 | None:intergenic |
| TAATCATCTCCAATTCTGTT+TGG | 0.409840 | 8.4:-4995570 | None:intergenic |
| AAAAGGCTGAAAGATGTAAA+TGG | 0.410708 | 8.4:+4995526 | MS.gene57970:CDS |
| GGCAAAATACCACCGGAACT+TGG | 0.412278 | 8.4:+4994348 | MS.gene57970:CDS |
| TCTGAGAAAACTGATGTGTT+TGG | 0.413753 | 8.4:+4996667 | MS.gene57970:CDS |
| GTGATATTTGACAGTGAAAC+AGG | 0.415378 | 8.4:-4994641 | None:intergenic |
| GCAGTTACTTCCATAATTAT+GGG | 0.416389 | 8.4:-4997639 | None:intergenic |
| CTTTCAAATAACAGATTCTC+TGG | 0.417680 | 8.4:+4994399 | MS.gene57970:CDS |
| AAGAAACTAGCAATTGCTCT+TGG | 0.430683 | 8.4:+4995144 | MS.gene57970:CDS |
| TGTGTAAGCACCTCTATTGA+AGG | 0.434046 | 8.4:+4994961 | MS.gene57970:CDS |
| GAATGATCTAGCTGGAAACT+TGG | 0.443349 | 8.4:-4994791 | None:intergenic |
| CCGGTGAGCTGTCAAATATT+GGG | 0.449268 | 8.4:-4997552 | None:intergenic |
| GTCCATCTCCTTCAAGCATC+CGG | 0.453360 | 8.4:-4997595 | None:intergenic |
| CTAATGGCAGTGTGGCCTCC+AGG | 0.453444 | 8.4:+4995677 | MS.gene57970:CDS |
| AAAACTGATGTGTTTGGATT+CGG | 0.453994 | 8.4:+4996673 | MS.gene57970:CDS |
| GAGAGAAAGGAACAGGCATA+AGG | 0.459838 | 8.4:-4995002 | None:intergenic |
| ACTATGATAGAATAGAGGTT+GGG | 0.460598 | 8.4:+4997501 | MS.gene57970:CDS |
| ACAAGAAAGAGGATAGCAAT+TGG | 0.467119 | 8.4:+4996424 | MS.gene57970:CDS |
| TGTAATGTAGCTTGAGAGAA+AGG | 0.467215 | 8.4:-4995015 | None:intergenic |
| CTGCAGAATAACAATATCTC+AGG | 0.472794 | 8.4:+4994327 | MS.gene57970:CDS |
| AGTGTGGCCTCCAGGCTTAG+AGG | 0.474485 | 8.4:+4995685 | MS.gene57970:CDS |
| TCCTATGCCATGGAACTCTC+TGG | 0.475946 | 8.4:+4997803 | MS.gene57970:CDS |
| CGAAAATGTCCGAAGTGGTC+CGG | 0.482877 | 8.4:+4997576 | MS.gene57970:CDS |
| GTAGCTTGAGAGAAAGGAAC+AGG | 0.483056 | 8.4:-4995009 | None:intergenic |
| TTCTCTCAAGCTACATTACA+AGG | 0.487136 | 8.4:+4995018 | MS.gene57970:CDS |
| GTCTTTGGATTCCTATGCCA+TGG | 0.488423 | 8.4:+4997793 | MS.gene57970:CDS |
| TTATTATTCTAATTTATCTA+GGG | 0.493768 | 8.4:-4997826 | None:intergenic |
| AGAATTGGAGATGATTAGCT+TGG | 0.500575 | 8.4:+4995576 | MS.gene57970:CDS |
| GAAGTGGTCCGGATGCTTGA+AGG | 0.504978 | 8.4:+4997587 | MS.gene57970:CDS |
| GCTTCTGGATGATGATTATG+AGG | 0.505832 | 8.4:+4996525 | MS.gene57970:CDS |
| GTCCGGATGCTTGAAGGAGA+TGG | 0.506859 | 8.4:+4997593 | MS.gene57970:CDS |
| CACGTACAGCAGTGGTGACA+TGG | 0.507834 | 8.4:-4996597 | None:intergenic |
| GCTCCTAGTCAATCTCTCTC+TGG | 0.510664 | 8.4:+4993924 | MS.gene57970:CDS |
| TCCAGAGCAGCCTTCAATAG+AGG | 0.511260 | 8.4:-4994971 | None:intergenic |
| ATAATTATGGAAGTAACTGC+TGG | 0.516926 | 8.4:+4997642 | MS.gene57970:CDS |
| GGATAGCAATTGGAGCTGCT+CGG | 0.517987 | 8.4:+4996434 | MS.gene57970:CDS |
| GCATACTTGAATGATCTAGC+TGG | 0.520617 | 8.4:-4994799 | None:intergenic |
| ACACTGCCATTAGACATGTA+AGG | 0.521490 | 8.4:-4995667 | None:intergenic |
| GGGAAAACCTTGAATCAAAA+GGG | 0.522291 | 8.4:+4996742 | MS.gene57970:CDS |
| CATGGGAATCAGCATGATCA+AGG | 0.525739 | 8.4:-4996579 | None:intergenic |
| TAGATTGGAACACAAGAAAG+AGG | 0.526629 | 8.4:+4996413 | MS.gene57970:CDS |
| GAAACTAGCAATTGCTCTTG+GGG | 0.526686 | 8.4:+4995146 | MS.gene57970:CDS |
| AGAGAAAGGAACAGGCATAA+GGG | 0.528614 | 8.4:-4995001 | None:intergenic |
| CTTGTGTTCCAATCTAAAGC+GGG | 0.530400 | 8.4:-4996406 | None:intergenic |
| CAGTTGCTTAATACATTGTG+TGG | 0.532963 | 8.4:-4993725 | None:intergenic |
| CTATGATAGAATAGAGGTTG+GGG | 0.534263 | 8.4:+4997502 | MS.gene57970:CDS |
| GAGATGGACTTGCTGAGAAG+TGG | 0.534650 | 8.4:+4997609 | MS.gene57970:CDS |
| GTAATCATAGCCCAACTACA+AGG | 0.539646 | 8.4:-4993767 | None:intergenic |
| AACTATGATAGAATAGAGGT+TGG | 0.540887 | 8.4:+4997500 | MS.gene57970:CDS |
| CCCAATATTTGACAGCTCAC+CGG | 0.543255 | 8.4:+4997552 | MS.gene57970:CDS |
| GCACGTTGGTGGCTGTGAAA+AGG | 0.543763 | 8.4:+4995509 | MS.gene57970:CDS |
| AATGATCTAGCTGGAAACTT+GGG | 0.547284 | 8.4:-4994790 | None:intergenic |
| CTAAAGTTTGAAGCTTCGGA+AGG | 0.551286 | 8.4:-4994374 | None:intergenic |
| GGAGCCATCTTGTATATTGG+TGG | 0.554478 | 8.4:+4995240 | MS.gene57970:CDS |
| ACTGCTGTACGTGGCACTGT+TGG | 0.560910 | 8.4:+4996607 | MS.gene57970:CDS |
| GAGCAACTATGATAGAATAG+AGG | 0.561325 | 8.4:+4997496 | MS.gene57970:CDS |
| AAAAGGGTGCTATGCTAGAG+TGG | 0.561565 | 8.4:+4996758 | MS.gene57970:CDS |
| GGATTAACTACCTCTAAGCC+TGG | 0.567961 | 8.4:-4995695 | None:intergenic |
| TGTTGCAGATTATAAAGAAG+AGG | 0.568279 | 8.4:+4995354 | MS.gene57970:intron |
| TCTTGTGTTCCAATCTAAAG+CGG | 0.575435 | 8.4:-4996407 | None:intergenic |
| TTTGACAGTGAAACAGGAAA+GGG | 0.576440 | 8.4:-4994635 | None:intergenic |
| ATTTGACAGTGAAACAGGAA+AGG | 0.581805 | 8.4:-4994636 | None:intergenic |
| TTCAAGCATCCGGACCACTT+CGG | 0.582402 | 8.4:-4997585 | None:intergenic |
| CATGATCAAGGAGCTTTGCA+AGG | 0.583148 | 8.4:-4996567 | None:intergenic |
| AAAGATGTAAATGGTAGTGC+TGG | 0.584402 | 8.4:+4995535 | MS.gene57970:CDS |
| CATACCACCAATATACAAGA+TGG | 0.586633 | 8.4:-4995244 | None:intergenic |
| TGGCCAGTCGAGAGGTACTC+CGG | 0.591031 | 8.4:-4996640 | None:intergenic |
| AGATGGACTTGCTGAGAAGT+GGG | 0.591600 | 8.4:+4997610 | MS.gene57970:CDS |
| CACTGCCATTAGACATGTAA+GGG | 0.593834 | 8.4:-4995666 | None:intergenic |
| GCACCGGAGTACCTCTCGAC+TGG | 0.596007 | 8.4:+4996637 | MS.gene57970:CDS |
| CACTGTTGGACACATTGCAC+CGG | 0.597740 | 8.4:+4996621 | MS.gene57970:CDS |
| GCTTGGAGATGGCACGTTGG+TGG | 0.601329 | 8.4:+4995498 | MS.gene57970:CDS |
| TATAGAAAGAAAAGACAGCA+TGG | 0.607515 | 8.4:+4995219 | MS.gene57970:CDS |
| AAGCATGTTTGGCATGACCA+TGG | 0.618862 | 8.4:+4997754 | MS.gene57970:CDS |
| AAAGGGTGCTATGCTAGAGT+GGG | 0.619734 | 8.4:+4996759 | MS.gene57970:CDS |
| CATGTCACCACTGCTGTACG+TGG | 0.619960 | 8.4:+4996598 | MS.gene57970:CDS |
| CAGATGATTGGCCAGTCGAG+AGG | 0.622760 | 8.4:-4996648 | None:intergenic |
| AACAGTGCCACGTACAGCAG+TGG | 0.627238 | 8.4:-4996605 | None:intergenic |
| TTACTTACAAGCCAATAACA+AGG | 0.630606 | 8.4:-4993808 | None:intergenic |
| TGAAACTATCTGTTGCGTGT+TGG | 0.632247 | 8.4:-4995423 | None:intergenic |
| GTTCCAGAGAGAGATTGACT+AGG | 0.633737 | 8.4:-4993927 | None:intergenic |
| GATGATTATGAGGCTATCGT+TGG | 0.639849 | 8.4:+4996535 | MS.gene57970:CDS |
| TCTAGGGCCAGAGAGTTCCA+TGG | 0.640192 | 8.4:-4997810 | None:intergenic |
| GAAGCTTGGAGATGGCACGT+TGG | 0.642164 | 8.4:+4995495 | MS.gene57970:CDS |
| TATCTCAGGCAAAATACCAC+CGG | 0.642190 | 8.4:+4994341 | MS.gene57970:CDS |
| TACTTACAAGCCAATAACAA+GGG | 0.643923 | 8.4:-4993807 | None:intergenic |
| GCCAGAGAGTTCCATGGCAT+AGG | 0.645514 | 8.4:-4997804 | None:intergenic |
| TAATCATAGCCCAACTACAA+GGG | 0.646229 | 8.4:-4993766 | None:intergenic |
| CAATTAAGCGAAGCAAATTG+CGG | 0.648023 | 8.4:-4995606 | None:intergenic |
| ACGTACAGCAGTGGTGACAT+GGG | 0.649817 | 8.4:-4996596 | None:intergenic |
| GGAAGGTTTCCAAGTTCCGG+TGG | 0.651991 | 8.4:-4994357 | None:intergenic |
| ATAGCAATTGGAGCTGCTCG+GGG | 0.653496 | 8.4:+4996436 | MS.gene57970:CDS |
| ATTGCTCATGAAGATACAGA+AGG | 0.668712 | 8.4:-4996459 | None:intergenic |
| ACACAATGTATTAAGCAACT+GGG | 0.681492 | 8.4:+4993727 | MS.gene57970:CDS |
| CCGGCCGAAAATGTCCGAAG+TGG | 0.682814 | 8.4:+4997571 | MS.gene57970:CDS |
| TTACAAGCCAATAACAAGGG+AGG | 0.685025 | 8.4:-4993804 | None:intergenic |
| TTACATGTCTAATGGCAGTG+TGG | 0.705590 | 8.4:+4995669 | MS.gene57970:CDS |
| TTAACTACCTCTAAGCCTGG+AGG | 0.741652 | 8.4:-4995692 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATTAATTAAAAAA+AGG | - | chr8.4:4993883-4993902 | None:intergenic | 0.0% |
| !! | ATAAAAAAAAAAGTGAAAAT+TGG | - | chr8.4:4994036-4994055 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAGTGAAAATT+GGG | - | chr8.4:4994035-4994054 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATTTTATTTGCA+GGG | + | chr8.4:4993899-4993918 | MS.gene57970:intron | 10.0% |
| !!! | TTTTTTTTTATTTTATTTGC+AGG | + | chr8.4:4993898-4993917 | MS.gene57970:intron | 10.0% |
| !! | AAAAAAAAAAAATGTTGCAA+AGG | - | chr8.4:4994249-4994268 | None:intergenic | 15.0% |
| !! | TAATACTATTATTGAAAAGT+TGG | + | chr8.4:4997059-4997078 | MS.gene57970:intron | 15.0% |
| !!! | ACAATAATATTAAGACATTT+TGG | - | chr8.4:4996988-4997007 | None:intergenic | 15.0% |
| !!! | ATTTTTAAGAAGAAAAGATA+AGG | - | chr8.4:4995077-4995096 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTTTATTTGCAG+GGG | + | chr8.4:4993900-4993919 | MS.gene57970:intron | 15.0% |
| !!! | TTTTTTTTATGTGAAATTGT+TGG | + | chr8.4:4994263-4994282 | MS.gene57970:intron | 15.0% |
| !! | AAATCAACAACCATAATTAT+CGG | - | chr8.4:4996254-4996273 | None:intergenic | 20.0% |
| !! | AAATCAACTACCATAATTAT+CGG | - | chr8.4:4995941-4995960 | None:intergenic | 20.0% |
| !! | AAGTGAAAAGGTAATAATAA+TGG | - | chr8.4:4993855-4993874 | None:intergenic | 20.0% |
| !! | TACTGTTTAAAGATTAATCA+GGG | + | chr8.4:4995781-4995800 | MS.gene57970:intron | 20.0% |
| !! | TTAATTAGCATTTATGATGT+TGG | + | chr8.4:4995328-4995347 | MS.gene57970:intron | 20.0% |
| !! | TTACTGTTTAAAGATTAATC+AGG | + | chr8.4:4995780-4995799 | MS.gene57970:intron | 20.0% |
| ! | AAAAAAGTGAAAATTGGGAA+AGG | - | chr8.4:4994030-4994049 | None:intergenic | 25.0% |
| ! | AAAAATACAGCAAGAAAAGA+AGG | + | chr8.4:4997445-4997464 | MS.gene57970:CDS | 25.0% |
| ! | AATGTTTGAATTGTAGAGTA+TGG | - | chr8.4:4996790-4996809 | None:intergenic | 25.0% |
| ! | CTATTATTGAAAAGTTGGAA+AGG | + | chr8.4:4997064-4997083 | MS.gene57970:intron | 25.0% |
| ! | TAAGATTCAATGGCTAATTA+AGG | - | chr8.4:4996051-4996070 | None:intergenic | 25.0% |
| ! | TAGATTATCTAGTTACAAAG+TGG | + | chr8.4:4995293-4995312 | MS.gene57970:intron | 25.0% |
| ! | TGATATTAAACACGATTCTT+TGG | + | chr8.4:4996828-4996847 | MS.gene57970:intron | 25.0% |
| ! | TTAATATGCATGTACTGTTA+TGG | + | chr8.4:4997194-4997213 | MS.gene57970:intron | 25.0% |
| !! | AATTCTTTGTGAACTCTTTT+GGG | + | chr8.4:4995857-4995876 | MS.gene57970:intron | 25.0% |
| !! | CAATTGCTACTTACAAATAA+TGG | - | chr8.4:4995837-4995856 | None:intergenic | 25.0% |
| !! | GACTAGTGATAAATTTTTGT+TGG | + | chr8.4:4997406-4997425 | MS.gene57970:intron | 25.0% |
| !! | TAAACCAGAATTTTGTCATT+AGG | - | chr8.4:4995646-4995665 | None:intergenic | 25.0% |
| !! | TTAGGAAATCTCAAACATTT+TGG | + | chr8.4:4995388-4995407 | MS.gene57970:CDS | 25.0% |
| !!! | GTTGTTTTTTGAAATGTGTT+TGG | + | chr8.4:4994096-4994115 | MS.gene57970:intron | 25.0% |
| !!! | TGTTACTTTTGTAGTATTGT+GGG | + | chr8.4:4994925-4994944 | MS.gene57970:intron | 25.0% |
| !!! | TTTGTTTGTAACTGTTGTTT+TGG | + | chr8.4:4994134-4994153 | MS.gene57970:intron | 25.0% |
| !!! | TTTTTGAAATGTGTTTGGTT+TGG | + | chr8.4:4994101-4994120 | MS.gene57970:intron | 25.0% |
| AAAAAGGAGTGAAAGTGAAA+AGG | - | chr8.4:4993867-4993886 | None:intergenic | 30.0% | |
| AAAACTGATGTGTTTGGATT+CGG | + | chr8.4:4996673-4996692 | MS.gene57970:CDS | 30.0% | |
| AAAAGGCTGAAAGATGTAAA+TGG | + | chr8.4:4995526-4995545 | MS.gene57970:CDS | 30.0% | |
| AAATTATAGCCTAATGTGGT+AGG | + | chr8.4:4997088-4997107 | MS.gene57970:intron | 30.0% | |
| AACTATGATAGAATAGAGGT+TGG | + | chr8.4:4997500-4997519 | MS.gene57970:CDS | 30.0% | |
| AAGATTTGATGCACAAAAAG+AGG | - | chr8.4:4994502-4994521 | None:intergenic | 30.0% | |
| AAGTGAAGGTAAAAATCAAC+TGG | - | chr8.4:4996325-4996344 | None:intergenic | 30.0% | |
| ACACAATGTATTAAGCAACT+GGG | + | chr8.4:4993727-4993746 | MS.gene57970:CDS | 30.0% | |
| ACATGTCCTTGAAATGAAAT+AGG | + | chr8.4:4997342-4997361 | MS.gene57970:intron | 30.0% | |
| ACTATGATAGAATAGAGGTT+GGG | + | chr8.4:4997501-4997520 | MS.gene57970:CDS | 30.0% | |
| AGCAGTTACTTCCATAATTA+TGG | - | chr8.4:4997643-4997662 | None:intergenic | 30.0% | |
| AGGAAAATTATAGCCTAATG+TGG | + | chr8.4:4997084-4997103 | MS.gene57970:intron | 30.0% | |
| AGGTGCTTACACAAATTAAT+GGG | - | chr8.4:4994954-4994973 | None:intergenic | 30.0% | |
| ATAATTATGGAAGTAACTGC+TGG | + | chr8.4:4997642-4997661 | MS.gene57970:CDS | 30.0% | |
| ATGAAAAATCAGGAAAGTCA+AGG | - | chr8.4:4996360-4996379 | None:intergenic | 30.0% | |
| ATGTGATGTAATAGGAAAAC+TGG | + | chr8.4:4996104-4996123 | MS.gene57970:intron | 30.0% | |
| ATTAAACAACAGGAAAGTGA+AGG | - | chr8.4:4996077-4996096 | None:intergenic | 30.0% | |
| CAGACATGATATGAAAAATC+AGG | - | chr8.4:4996370-4996389 | None:intergenic | 30.0% | |
| CAGATACCTATTTCATTTCA+AGG | - | chr8.4:4997351-4997370 | None:intergenic | 30.0% | |
| CATGCATGATATTAAACAAC+AGG | - | chr8.4:4996087-4996106 | None:intergenic | 30.0% | |
| CTATTATTTACTTGTCTCTG+TGG | + | chr8.4:4996275-4996294 | MS.gene57970:intron | 30.0% | |
| CTCTTATTAGAGCTTATAAC+TGG | + | chr8.4:4996700-4996719 | MS.gene57970:CDS | 30.0% | |
| CTGCAAACGAAAATATAACA+TGG | - | chr8.4:4995110-4995129 | None:intergenic | 30.0% | |
| CTTTCAAATAACAGATTCTC+TGG | + | chr8.4:4994399-4994418 | MS.gene57970:CDS | 30.0% | |
| CTTTCTCTTTCTTTCAAATG+TGG | + | chr8.4:4994825-4994844 | MS.gene57970:intron | 30.0% | |
| GAAATAGGTATCTGTATGTT+AGG | + | chr8.4:4997357-4997376 | MS.gene57970:intron | 30.0% | |
| GCAGTTACTTCCATAATTAT+GGG | - | chr8.4:4997642-4997661 | None:intergenic | 30.0% | |
| GGTAATAAGTTTCAAAGTGA+AGG | - | chr8.4:4996339-4996358 | None:intergenic | 30.0% | |
| TAATCATCTCCAATTCTGTT+TGG | - | chr8.4:4995573-4995592 | None:intergenic | 30.0% | |
| TACTCCTAATGACAAAATTC+TGG | + | chr8.4:4995639-4995658 | MS.gene57970:CDS | 30.0% | |
| TACTTACAAGCCAATAACAA+GGG | - | chr8.4:4993810-4993829 | None:intergenic | 30.0% | |
| TATAGAAAGAAAAGACAGCA+TGG | + | chr8.4:4995219-4995238 | MS.gene57970:CDS | 30.0% | |
| TATCATGCATGTGATGTAAT+AGG | + | chr8.4:4996096-4996115 | MS.gene57970:intron | 30.0% | |
| TATCATGTCTGTGATGTAAT+AGG | + | chr8.4:4996379-4996398 | MS.gene57970:intron | 30.0% | |
| TCTGAGTATTCCGATAATTA+TGG | + | chr8.4:4995928-4995947 | MS.gene57970:intron | 30.0% | |
| TGTTGCAGATTATAAAGAAG+AGG | + | chr8.4:4995354-4995373 | MS.gene57970:intron | 30.0% | |
| TTACTTACAAGCCAATAACA+AGG | - | chr8.4:4993811-4993830 | None:intergenic | 30.0% | |
| TTCAATTGATTGAGTGAAGA+TGG | - | chr8.4:4994432-4994451 | None:intergenic | 30.0% | |
| TTCAGCTCCAAAAATATACT+CGG | + | chr8.4:4995442-4995461 | MS.gene57970:CDS | 30.0% | |
| ! | AATTGAACTTCGATCTCTTT+TGG | + | chr8.4:4996169-4996188 | MS.gene57970:intron | 30.0% |
| ! | AGAAAAGAAGGTTGAAGTTT+TGG | + | chr8.4:4997457-4997476 | MS.gene57970:CDS | 30.0% |
| ! | AGATCTAAAGTTTGAAGCTT+CGG | - | chr8.4:4994381-4994400 | None:intergenic | 30.0% |
| ! | ATTGAACTTCGATCTCTTTT+GGG | + | chr8.4:4996170-4996189 | MS.gene57970:intron | 30.0% |
| ! | CATGTTATATTTTCGTTTGC+AGG | + | chr8.4:4995108-4995127 | MS.gene57970:intron | 30.0% |
| ! | GAATTCTTTGTGAACTCTTT+TGG | + | chr8.4:4995856-4995875 | MS.gene57970:intron | 30.0% |
| ! | TCTCGGTCATATTTTCTTTT+GGG | - | chr8.4:4997280-4997299 | None:intergenic | 30.0% |
| ! | TTCTCGGTCATATTTTCTTT+TGG | - | chr8.4:4997281-4997300 | None:intergenic | 30.0% |
| ! | TTCTCTATTAGTCCTGTTTT+TGG | + | chr8.4:4995185-4995204 | MS.gene57970:CDS | 30.0% |
| ! | TTGTCTTTTAACAATCTCAC+TGG | + | chr8.4:4994760-4994779 | MS.gene57970:CDS | 30.0% |
| ! | TTTTGGTATGAAACTGGTTA+GGG | + | chr8.4:4994151-4994170 | MS.gene57970:intron | 30.0% |
| !! | AGGTTTTGGCAATGTTTATA+GGG | + | chr8.4:4995471-4995490 | MS.gene57970:CDS | 30.0% |
| !! | GTGAAGGTATTAAGATTCAA+TGG | - | chr8.4:4996061-4996080 | None:intergenic | 30.0% |
| !! | TCTCTATTAGTCCTGTTTTT+GGG | + | chr8.4:4995186-4995205 | MS.gene57970:CDS | 30.0% |
| !!! | CTGTATTTTTTTAACCTGTG+AGG | - | chr8.4:4997435-4997454 | None:intergenic | 30.0% |
| !!! | CTGTTACTTTTGTAGTATTG+TGG | + | chr8.4:4994924-4994943 | MS.gene57970:intron | 30.0% |
| !!! | GTTACTTTTGTAGTATTGTG+GGG | + | chr8.4:4994926-4994945 | MS.gene57970:intron | 30.0% |
| !!! | TTCATCATGTTTTGAAGTAG+TGG | - | chr8.4:4997717-4997736 | None:intergenic | 30.0% |
| AAGAAACTAGCAATTGCTCT+TGG | + | chr8.4:4995144-4995163 | MS.gene57970:CDS | 35.0% | |
| AATGATCTAGCTGGAAACTT+GGG | - | chr8.4:4994793-4994812 | None:intergenic | 35.0% | |
| AATGCTAACTCTGTACATTC+AGG | + | chr8.4:4994734-4994753 | MS.gene57970:intron | 35.0% | |
| ACAAGAAAGAGGATAGCAAT+TGG | + | chr8.4:4996424-4996443 | MS.gene57970:CDS | 35.0% | |
| ACAGTGAAGAATCAAGACAA+AGG | - | chr8.4:4994908-4994927 | None:intergenic | 35.0% | |
| ACATCTCTGTGTATGATCTT+TGG | - | chr8.4:4996490-4996509 | None:intergenic | 35.0% | |
| AGAAACTAGCAATTGCTCTT+GGG | + | chr8.4:4995145-4995164 | MS.gene57970:CDS | 35.0% | |
| AGAAGAAAAGATAAGGAACC+AGG | - | chr8.4:4995070-4995089 | None:intergenic | 35.0% | |
| ATCGCTAAGAATTCAAGTGA+TGG | + | chr8.4:4995894-4995913 | MS.gene57970:intron | 35.0% | |
| ATGCATGTACTGTTATGGTA+GGG | + | chr8.4:4997199-4997218 | MS.gene57970:intron | 35.0% | |
| ATGCTAACTCTGTACATTCA+GGG | + | chr8.4:4994735-4994754 | MS.gene57970:intron | 35.0% | |
| ATTGATCTACACTTGACACA+GGG | + | chr8.4:4996947-4996966 | MS.gene57970:intron | 35.0% | |
| ATTGCTCATGAAGATACAGA+AGG | - | chr8.4:4996462-4996481 | None:intergenic | 35.0% | |
| ATTTATCACTAGTCACTCTG+AGG | - | chr8.4:4997400-4997419 | None:intergenic | 35.0% | |
| ATTTGACAGTGAAACAGGAA+AGG | - | chr8.4:4994639-4994658 | None:intergenic | 35.0% | |
| CAATTAAGCGAAGCAAATTG+CGG | - | chr8.4:4995609-4995628 | None:intergenic | 35.0% | |
| CACACAATGTATTAAGCAAC+TGG | + | chr8.4:4993726-4993745 | MS.gene57970:CDS | 35.0% | |
| CAGTTGCTTAATACATTGTG+TGG | - | chr8.4:4993728-4993747 | None:intergenic | 35.0% | |
| CATACCACCAATATACAAGA+TGG | - | chr8.4:4995247-4995266 | None:intergenic | 35.0% | |
| CTATGATAGAATAGAGGTTG+GGG | + | chr8.4:4997502-4997521 | MS.gene57970:CDS | 35.0% | |
| CTGCAGAATAACAATATCTC+AGG | + | chr8.4:4994327-4994346 | MS.gene57970:CDS | 35.0% | |
| GAAAACATACCTACCACATT+AGG | - | chr8.4:4997100-4997119 | None:intergenic | 35.0% | |
| GAGCAACTATGATAGAATAG+AGG | + | chr8.4:4997496-4997515 | MS.gene57970:CDS | 35.0% | |
| GGGAAAACCTTGAATCAAAA+GGG | + | chr8.4:4996742-4996761 | MS.gene57970:CDS | 35.0% | |
| GTGATATTTGACAGTGAAAC+AGG | - | chr8.4:4994644-4994663 | None:intergenic | 35.0% | |
| GTTACAGTTCCAAACAGAAT+TGG | + | chr8.4:4995561-4995580 | MS.gene57970:CDS | 35.0% | |
| GTTTACCCTTACATGTCTAA+TGG | + | chr8.4:4995661-4995680 | MS.gene57970:CDS | 35.0% | |
| TAAAGATTAATCAGGGCTCT+CGG | + | chr8.4:4995788-4995807 | MS.gene57970:intron | 35.0% | |
| TAATCATAGCCCAACTACAA+GGG | - | chr8.4:4993769-4993788 | None:intergenic | 35.0% | |
| TAGATTGGAACACAAGAAAG+AGG | + | chr8.4:4996413-4996432 | MS.gene57970:CDS | 35.0% | |
| TATGCATGTACTGTTATGGT+AGG | + | chr8.4:4997198-4997217 | MS.gene57970:intron | 35.0% | |
| TATTGATCTACACTTGACAC+AGG | + | chr8.4:4996946-4996965 | MS.gene57970:intron | 35.0% | |
| TCGCTAAGAATTCAAGTGAT+GGG | + | chr8.4:4996208-4996227 | MS.gene57970:intron | 35.0% | |
| TCTGAGAAAACTGATGTGTT+TGG | + | chr8.4:4996667-4996686 | MS.gene57970:CDS | 35.0% | |
| TCTTGTGTTCCAATCTAAAG+CGG | - | chr8.4:4996410-4996429 | None:intergenic | 35.0% | |
| TGCTATTGTTTACTTGTCTC+TGG | + | chr8.4:4995960-4995979 | MS.gene57970:intron | 35.0% | |
| TGGGAAAACCTTGAATCAAA+AGG | + | chr8.4:4996741-4996760 | MS.gene57970:CDS | 35.0% | |
| TGTAATGTAGCTTGAGAGAA+AGG | - | chr8.4:4995018-4995037 | None:intergenic | 35.0% | |
| TTCTCTCAAGCTACATTACA+AGG | + | chr8.4:4995018-4995037 | MS.gene57970:CDS | 35.0% | |
| TTTGACAGTGAAACAGGAAA+GGG | - | chr8.4:4994638-4994657 | None:intergenic | 35.0% | |
| ! | AAAGATGTAAATGGTAGTGC+TGG | + | chr8.4:4995535-4995554 | MS.gene57970:CDS | 35.0% |
| ! | AACTTGCTTTCTTGTGAGTA+TGG | + | chr8.4:4994666-4994685 | MS.gene57970:intron | 35.0% |
| ! | AAGAGCAATTGCTAGTTTCT+TGG | - | chr8.4:4995145-4995164 | None:intergenic | 35.0% |
| ! | AGAATTGGAGATGATTAGCT+TGG | + | chr8.4:4995576-4995595 | MS.gene57970:CDS | 35.0% |
| ! | CATCAGTTTTCTCAGATGAT+TGG | - | chr8.4:4996663-4996682 | None:intergenic | 35.0% |
| ! | GAGGTGCTTACACAAATTAA+TGG | - | chr8.4:4994955-4994974 | None:intergenic | 35.0% |
| ! | TGATGATGATGATCAGTCTT+TGG | + | chr8.4:4997778-4997797 | MS.gene57970:CDS | 35.0% |
| !! | AAAGAAGGTTGAAGTTTTGG+TGG | + | chr8.4:4997460-4997479 | MS.gene57970:CDS | 35.0% |
| !! | ACTGGCTTTAGATTGAAACA+CGG | + | chr8.4:4996122-4996141 | MS.gene57970:intron | 35.0% |
| !! | GAGGTTTTGGCAATGTTTAT+AGG | + | chr8.4:4995470-4995489 | MS.gene57970:CDS | 35.0% |
| !! | GGTTTTGGCAATGTTTATAG+GGG | + | chr8.4:4995472-4995491 | MS.gene57970:CDS | 35.0% |
| !! | GTTGGAGTGTTTTCTGATTT+GGG | + | chr8.4:4994281-4994300 | MS.gene57970:intron | 35.0% |
| !! | GTTTTGGCAATGTTTATAGG+GGG | + | chr8.4:4995473-4995492 | MS.gene57970:CDS | 35.0% |
| !! | GTTTTGGTATGAAACTGGTT+AGG | + | chr8.4:4994150-4994169 | MS.gene57970:intron | 35.0% |
| !! | TGTTGGAGTGTTTTCTGATT+TGG | + | chr8.4:4994280-4994299 | MS.gene57970:intron | 35.0% |
| !! | TTCAAGTGATGGGCTATAAA+TGG | + | chr8.4:4996218-4996237 | MS.gene57970:intron | 35.0% |
| !!! | CTCTATTAGTCCTGTTTTTG+GGG | + | chr8.4:4995187-4995206 | MS.gene57970:CDS | 35.0% |
| !!! | CTGTTGTTTTGGTATGAAAC+TGG | + | chr8.4:4994145-4994164 | MS.gene57970:intron | 35.0% |
| !!! | GTTTTCTGATTTGGGTTTGT+TGG | + | chr8.4:4994289-4994308 | MS.gene57970:intron | 35.0% |
| !!! | TCATGTTTTGAAGTAGTGGT+CGG | - | chr8.4:4997713-4997732 | None:intergenic | 35.0% |
| AAAAGCTGCTAATGTGCTTC+TGG | + | chr8.4:4996510-4996529 | MS.gene57970:CDS | 40.0% | |
| AAAGATAAGGAACCAGGTTG+AGG | - | chr8.4:4995064-4995083 | None:intergenic | 40.0% | |
| AATGTTTATAGGGGGAAGCT+TGG | + | chr8.4:4995481-4995500 | MS.gene57970:CDS | 40.0% | |
| ACACTGCCATTAGACATGTA+AGG | - | chr8.4:4995670-4995689 | None:intergenic | 40.0% | |
| ACTGTGTAGTTGTTGACACT+AGG | + | chr8.4:4997300-4997319 | MS.gene57970:intron | 40.0% | |
| AGAGAAAGGAACAGGCATAA+GGG | - | chr8.4:4995004-4995023 | None:intergenic | 40.0% | |
| AGATCAAGCAAAAGCTAAGC+AGG | - | chr8.4:4996916-4996935 | None:intergenic | 40.0% | |
| CACTGCCATTAGACATGTAA+GGG | - | chr8.4:4995669-4995688 | None:intergenic | 40.0% | |
| CATGATCGTTCAAGCATGTT+TGG | + | chr8.4:4997743-4997762 | MS.gene57970:CDS | 40.0% | |
| CATGGAGCCATCTTGTATAT+TGG | + | chr8.4:4995237-4995256 | MS.gene57970:CDS | 40.0% | |
| CATTTCAAGGACATGTACCA+GGG | - | chr8.4:4997338-4997357 | None:intergenic | 40.0% | |
| CTGATCATCATCATCATCCA+TGG | - | chr8.4:4997774-4997793 | None:intergenic | 40.0% | |
| GAAACTAGCAATTGCTCTTG+GGG | + | chr8.4:4995146-4995165 | MS.gene57970:CDS | 40.0% | |
| GAATGATCTAGCTGGAAACT+TGG | - | chr8.4:4994794-4994813 | None:intergenic | 40.0% | |
| GATGATTATGAGGCTATCGT+TGG | + | chr8.4:4996535-4996554 | MS.gene57970:CDS | 40.0% | |
| GCATACTTGAATGATCTAGC+TGG | - | chr8.4:4994802-4994821 | None:intergenic | 40.0% | |
| GCTTCTGGATGATGATTATG+AGG | + | chr8.4:4996525-4996544 | MS.gene57970:CDS | 40.0% | |
| GGACAAACGAGATTGGAAAT+AGG | - | chr8.4:4994009-4994028 | None:intergenic | 40.0% | |
| GTAATCATAGCCCAACTACA+AGG | - | chr8.4:4993770-4993789 | None:intergenic | 40.0% | |
| GTCAACAACTACACAGTTCT+CGG | - | chr8.4:4997297-4997316 | None:intergenic | 40.0% | |
| TATCTCAGGCAAAATACCAC+CGG | + | chr8.4:4994341-4994360 | MS.gene57970:CDS | 40.0% | |
| TCATTTCAAGGACATGTACC+AGG | - | chr8.4:4997339-4997358 | None:intergenic | 40.0% | |
| TCGCTAAGAATTCAAGTGAG+AGG | + | chr8.4:4995895-4995914 | MS.gene57970:intron | 40.0% | |
| TGAAACTATCTGTTGCGTGT+TGG | - | chr8.4:4995426-4995445 | None:intergenic | 40.0% | |
| TGTGTAAGCACCTCTATTGA+AGG | + | chr8.4:4994961-4994980 | MS.gene57970:CDS | 40.0% | |
| TTACAAGCCAATAACAAGGG+AGG | - | chr8.4:4993807-4993826 | None:intergenic | 40.0% | |
| TTACATGTCTAATGGCAGTG+TGG | + | chr8.4:4995669-4995688 | MS.gene57970:CDS | 40.0% | |
| TTCAAGTGAGAGGCTAGAAA+TGG | + | chr8.4:4995905-4995924 | MS.gene57970:intron | 40.0% | |
| ! | CAAGGTTTTCCCAAACTCAA+GGG | - | chr8.4:4996734-4996753 | None:intergenic | 40.0% |
| ! | CGCAATTTGCTTCGCTTAAT+TGG | + | chr8.4:4995607-4995626 | MS.gene57970:CDS | 40.0% |
| ! | CTAAAGTTTGAAGCTTCGGA+AGG | - | chr8.4:4994377-4994396 | None:intergenic | 40.0% |
| ! | CTGAACAACAATAGCTTGTC+TGG | + | chr8.4:4994611-4994630 | MS.gene57970:CDS | 40.0% |
| ! | CTTGTGTTCCAATCTAAAGC+GGG | - | chr8.4:4996409-4996428 | None:intergenic | 40.0% |
| ! | TAGGAAAACCCGCTTTAGAT+TGG | + | chr8.4:4996398-4996417 | MS.gene57970:intron | 40.0% |
| ! | TCAAGGTTTTCCCAAACTCA+AGG | - | chr8.4:4996735-4996754 | None:intergenic | 40.0% |
| ! | TCTGATTCCTCCCTTGTTAT+TGG | + | chr8.4:4993797-4993816 | MS.gene57970:CDS | 40.0% |
| !! | AAAAATATACTCGGTGCTGG+AGG | + | chr8.4:4995451-4995470 | MS.gene57970:CDS | 40.0% |
| !! | ATTTTTGTTGGTGTCCTCAC+AGG | + | chr8.4:4997418-4997437 | MS.gene57970:intron | 40.0% |
| !! | CATAGCACCCTTTTGATTCA+AGG | - | chr8.4:4996752-4996771 | None:intergenic | 40.0% |
| !! | GGGTTTGTTGGTTGAAATGT+AGG | + | chr8.4:4994301-4994320 | MS.gene57970:intron | 40.0% |
| !! | TCCAAAAATATACTCGGTGC+TGG | + | chr8.4:4995448-4995467 | MS.gene57970:CDS | 40.0% |
| !! | TCCAGCACCGAGTATATTTT+TGG | - | chr8.4:4995452-4995471 | None:intergenic | 40.0% |
| !! | TTTTGGTGGACAAGGAACTA+GGG | + | chr8.4:4997474-4997493 | MS.gene57970:CDS | 40.0% |
| AAGCATGTTTGGCATGACCA+TGG | + | chr8.4:4997754-4997773 | MS.gene57970:CDS | 45.0% | |
| ACCAAAAGAGCCCCAAAAAC+AGG | - | chr8.4:4995200-4995219 | None:intergenic | 45.0% | |
| CATGATCAAGGAGCTTTGCA+AGG | - | chr8.4:4996570-4996589 | None:intergenic | 45.0% | |
| CATGGGAATCAGCATGATCA+AGG | - | chr8.4:4996582-4996601 | None:intergenic | 45.0% | |
| CCCAATATTTGACAGCTCAC+CGG | + | chr8.4:4997552-4997571 | MS.gene57970:CDS | 45.0% | |
| CCGGTGAGCTGTCAAATATT+GGG | - | chr8.4:4997555-4997574 | None:intergenic | 45.0% | |
| CTCTGTTGACCCTTGTAGTT+GGG | + | chr8.4:4993757-4993776 | MS.gene57970:CDS | 45.0% | |
| GAATGACAGCCCTTGAGTTT+GGG | + | chr8.4:4996722-4996741 | MS.gene57970:CDS | 45.0% | |
| GAGAGAAAGGAACAGGCATA+AGG | - | chr8.4:4995005-4995024 | None:intergenic | 45.0% | |
| GGAGCCATCTTGTATATTGG+TGG | + | chr8.4:4995240-4995259 | MS.gene57970:CDS | 45.0% | |
| GGATTAACTACCTCTAAGCC+TGG | - | chr8.4:4995698-4995717 | None:intergenic | 45.0% | |
| GGTATGTTGCACTGCAACAA+TGG | + | chr8.4:4995261-4995280 | MS.gene57970:intron | 45.0% | |
| GTAGCTTGAGAGAAAGGAAC+AGG | - | chr8.4:4995012-4995031 | None:intergenic | 45.0% | |
| GTCTTTGGATTCCTATGCCA+TGG | + | chr8.4:4997793-4997812 | MS.gene57970:CDS | 45.0% | |
| GTTCCAGAGAGAGATTGACT+AGG | - | chr8.4:4993930-4993949 | None:intergenic | 45.0% | |
| TCTCTGTTGACCCTTGTAGT+TGG | + | chr8.4:4993756-4993775 | MS.gene57970:CDS | 45.0% | |
| TGGGAAAGGACAAACGAGAT+TGG | - | chr8.4:4994016-4994035 | None:intergenic | 45.0% | |
| TTAACTACCTCTAAGCCTGG+AGG | - | chr8.4:4995695-4995714 | None:intergenic | 45.0% | |
| TTCGGAAGGTTTCCAAGTTC+CGG | - | chr8.4:4994363-4994382 | None:intergenic | 45.0% | |
| TTGCGATGCACTGCACTATA+GGG | + | chr8.4:4997163-4997182 | MS.gene57970:intron | 45.0% | |
| ! | GAAGAGGCTGTTGTTAGCTT+AGG | + | chr8.4:4995370-4995389 | MS.gene57970:CDS | 45.0% |
| ! | TAAGGAACCAGGTTGAGGAA+TGG | - | chr8.4:4995059-4995078 | None:intergenic | 45.0% |
| !! | AAAAGGGTGCTATGCTAGAG+TGG | + | chr8.4:4996758-4996777 | MS.gene57970:CDS | 45.0% |
| !! | AAAGGGTGCTATGCTAGAGT+GGG | + | chr8.4:4996759-4996778 | MS.gene57970:CDS | 45.0% |
| !! | AGATGGACTTGCTGAGAAGT+GGG | + | chr8.4:4997610-4997629 | MS.gene57970:CDS | 45.0% |
| !! | GGTTGAAGTTTTGGTGGACA+AGG | + | chr8.4:4997466-4997485 | MS.gene57970:CDS | 45.0% |
| !! | GTTTTGGTGGACAAGGAACT+AGG | + | chr8.4:4997473-4997492 | MS.gene57970:CDS | 45.0% |
| !! | TGGGCATCGACCCATAATTA+TGG | + | chr8.4:4997629-4997648 | MS.gene57970:CDS | 45.0% |
| !!! | GAGGCTATCGTTGGTGATTT+TGG | + | chr8.4:4996544-4996563 | MS.gene57970:CDS | 45.0% |
| !!! | TCCTGTTTTTGGGGCTCTTT+TGG | + | chr8.4:4995196-4995215 | MS.gene57970:CDS | 45.0% |
| !!! | TTATTATAAGTTTAAAATAA+TGG | - | chr8.4:4994864-4994883 | None:intergenic | 5.0% |
| ACCTCTATTGAAGGCTGCTC+TGG | + | chr8.4:4994970-4994989 | MS.gene57970:CDS | 50.0% | |
| ACGTACAGCAGTGGTGACAT+GGG | - | chr8.4:4996599-4996618 | None:intergenic | 50.0% | |
| ATAGCAATTGGAGCTGCTCG+GGG | + | chr8.4:4996436-4996455 | MS.gene57970:CDS | 50.0% | |
| CACTGTTGGACACATTGCAC+CGG | + | chr8.4:4996621-4996640 | MS.gene57970:CDS | 50.0% | |
| CGAAAATGTCCGAAGTGGTC+CGG | + | chr8.4:4997576-4997595 | MS.gene57970:CDS | 50.0% | |
| CTTGCGATGCACTGCACTAT+AGG | + | chr8.4:4997162-4997181 | MS.gene57970:intron | 50.0% | |
| GATAGCAATTGGAGCTGCTC+GGG | + | chr8.4:4996435-4996454 | MS.gene57970:CDS | 50.0% | |
| GCCGGTGAGCTGTCAAATAT+TGG | - | chr8.4:4997556-4997575 | None:intergenic | 50.0% | |
| GCTCAACAGCAGCTAGTAGA+TGG | - | chr8.4:4995719-4995738 | None:intergenic | 50.0% | |
| GCTCCTAGTCAATCTCTCTC+TGG | + | chr8.4:4993924-4993943 | MS.gene57970:CDS | 50.0% | |
| GGAATGACAGCCCTTGAGTT+TGG | + | chr8.4:4996721-4996740 | MS.gene57970:CDS | 50.0% | |
| GGATAGCAATTGGAGCTGCT+CGG | + | chr8.4:4996434-4996453 | MS.gene57970:CDS | 50.0% | |
| GGCAAAATACCACCGGAACT+TGG | + | chr8.4:4994348-4994367 | MS.gene57970:CDS | 50.0% | |
| GTCCATCTCCTTCAAGCATC+CGG | - | chr8.4:4997598-4997617 | None:intergenic | 50.0% | |
| GTTGAGGAATGGAGGTGGAA+GGG | - | chr8.4:4995048-4995067 | None:intergenic | 50.0% | |
| TATAGGGGGAAGCTTGGAGA+TGG | + | chr8.4:4995487-4995506 | MS.gene57970:CDS | 50.0% | |
| TCCAGAGCAGCCTTCAATAG+AGG | - | chr8.4:4994974-4994993 | None:intergenic | 50.0% | |
| TCCTATGCCATGGAACTCTC+TGG | + | chr8.4:4997803-4997822 | MS.gene57970:CDS | 50.0% | |
| TGTTTGCACGCAATGAGAGC+AGG | + | chr8.4:4994585-4994604 | MS.gene57970:intron | 50.0% | |
| TTCAAGCATCCGGACCACTT+CGG | - | chr8.4:4997588-4997607 | None:intergenic | 50.0% | |
| ! | CGGACCACTTCGGACATTTT+CGG | - | chr8.4:4997578-4997597 | None:intergenic | 50.0% |
| !! | GAGATGGACTTGCTGAGAAG+TGG | + | chr8.4:4997609-4997628 | MS.gene57970:CDS | 50.0% |
| !!! | ATACTCGGTGCTGGAGGTTT+TGG | + | chr8.4:4995457-4995476 | MS.gene57970:CDS | 50.0% |
| AACAGTGCCACGTACAGCAG+TGG | - | chr8.4:4996608-4996627 | None:intergenic | 55.0% | |
| AAGGACATGTACCAGGGAGC+AGG | - | chr8.4:4997332-4997351 | None:intergenic | 55.0% | |
| ACTGCTGTACGTGGCACTGT+TGG | + | chr8.4:4996607-4996626 | MS.gene57970:CDS | 55.0% | |
| AGTGCAGTGCATCGCAAGTC+AGG | - | chr8.4:4997160-4997179 | None:intergenic | 55.0% | |
| CACGTACAGCAGTGGTGACA+TGG | - | chr8.4:4996600-4996619 | None:intergenic | 55.0% | |
| CATGTCACCACTGCTGTACG+TGG | + | chr8.4:4996598-4996617 | MS.gene57970:CDS | 55.0% | |
| GAAGCTTGGAGATGGCACGT+TGG | + | chr8.4:4995495-4995514 | MS.gene57970:CDS | 55.0% | |
| GAAGTGGTCCGGATGCTTGA+AGG | + | chr8.4:4997587-4997606 | MS.gene57970:CDS | 55.0% | |
| GCCAGAGAGTTCCATGGCAT+AGG | - | chr8.4:4997807-4997826 | None:intergenic | 55.0% | |
| GGAAGGTTTCCAAGTTCCGG+TGG | - | chr8.4:4994360-4994379 | None:intergenic | 55.0% | |
| GGTTGAGGAATGGAGGTGGA+AGG | - | chr8.4:4995049-4995068 | None:intergenic | 55.0% | |
| GTCCGGATGCTTGAAGGAGA+TGG | + | chr8.4:4997593-4997612 | MS.gene57970:CDS | 55.0% | |
| TCCACCTCCATTCCTCAACC+TGG | + | chr8.4:4995049-4995068 | MS.gene57970:intron | 55.0% | |
| TTGCACGCAATGAGAGCAGG+AGG | + | chr8.4:4994588-4994607 | MS.gene57970:intron | 55.0% | |
| ! | ACCAGGTTGAGGAATGGAGG+TGG | - | chr8.4:4995053-4995072 | None:intergenic | 55.0% |
| ! | CAGATGATTGGCCAGTCGAG+AGG | - | chr8.4:4996651-4996670 | None:intergenic | 55.0% |
| ! | CCACTTCGGACATTTTCGGC+CGG | - | chr8.4:4997574-4997593 | None:intergenic | 55.0% |
| ! | GGAACCAGGTTGAGGAATGG+AGG | - | chr8.4:4995056-4995075 | None:intergenic | 55.0% |
| ! | TCTAGGGCCAGAGAGTTCCA+TGG | - | chr8.4:4997813-4997832 | None:intergenic | 55.0% |
| !! | GCACGTTGGTGGCTGTGAAA+AGG | + | chr8.4:4995509-4995528 | MS.gene57970:CDS | 55.0% |
| AGTGTGGCCTCCAGGCTTAG+AGG | + | chr8.4:4995685-4995704 | MS.gene57970:CDS | 60.0% | |
| CCGGCCGAAAATGTCCGAAG+TGG | + | chr8.4:4997571-4997590 | MS.gene57970:CDS | 60.0% | |
| CTAATGGCAGTGTGGCCTCC+AGG | + | chr8.4:4995677-4995696 | MS.gene57970:CDS | 60.0% | |
| GCTTGGAGATGGCACGTTGG+TGG | + | chr8.4:4995498-4995517 | MS.gene57970:CDS | 60.0% | |
| !! | TGGCCAGTCGAGAGGTACTC+CGG | - | chr8.4:4996643-4996662 | None:intergenic | 60.0% |
| CTAGGCTGACACCTGCTCCC+TGG | + | chr8.4:4997318-4997337 | MS.gene57970:intron | 65.0% | |
| ! | GCACCGGAGTACCTCTCGAC+TGG | + | chr8.4:4996637-4996656 | MS.gene57970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 4993687 | 4997835 | 4993687 | ID=MS.gene57970 |
| chr8.4 | mRNA | 4993687 | 4997835 | 4993687 | ID=MS.gene57970.t1;Parent=MS.gene57970 |
| chr8.4 | exon | 4993687 | 4993822 | 4993687 | ID=MS.gene57970.t1.exon1;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4993687 | 4993822 | 4993687 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4993920 | 4993991 | 4993920 | ID=MS.gene57970.t1.exon2;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4993920 | 4993991 | 4993920 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4994323 | 4994466 | 4994323 | ID=MS.gene57970.t1.exon3;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4994323 | 4994466 | 4994323 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4994607 | 4994678 | 4994607 | ID=MS.gene57970.t1.exon4;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4994607 | 4994678 | 4994607 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4994756 | 4994815 | 4994756 | ID=MS.gene57970.t1.exon5;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4994756 | 4994815 | 4994756 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4994939 | 4995039 | 4994939 | ID=MS.gene57970.t1.exon6;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4994939 | 4995039 | 4994939 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4995130 | 4995261 | 4995130 | ID=MS.gene57970.t1.exon7;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4995130 | 4995261 | 4995130 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4995362 | 4995706 | 4995362 | ID=MS.gene57970.t1.exon8;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4995362 | 4995706 | 4995362 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4996401 | 4996780 | 4996401 | ID=MS.gene57970.t1.exon9;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4996401 | 4996780 | 4996401 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| chr8.4 | exon | 4997440 | 4997835 | 4997440 | ID=MS.gene57970.t1.exon10;Parent=MS.gene57970.t1 |
| chr8.4 | CDS | 4997440 | 4997835 | 4997440 | ID=cds.MS.gene57970.t1;Parent=MS.gene57970.t1 |
| Gene Sequence |
| Protein sequence |
