AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58002

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 214 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCACCATCTTCAATTT+TGG 0.130863 8.1:-11207213 MS.gene58002:CDS
TTGGTTCCATGCTCCCTTAC+TGG 0.179425 8.1:-11206316 MS.gene58002:CDS
CTTGTTTCTTTGGCTCTCTT+TGG 0.191937 8.1:-11206410 MS.gene58002:CDS
TTCTGCCGCCCTTGTTTCTT+TGG 0.203229 8.1:-11206420 MS.gene58002:CDS
CTGTTATAGGGGTTTGCTAT+TGG 0.234420 8.1:-11206443 MS.gene58002:intron
TTTCTTACAGCTGGATTTCT+TGG 0.236124 8.1:+11207666 None:intergenic
GGCATCACATCAGTTATTTC+TGG 0.246728 8.1:-11208029 MS.gene58002:CDS
ATTTACCTCAATGTACTTCT+TGG 0.252601 8.1:+11205830 None:intergenic
GCTGCTACCAATGTTATATT+TGG 0.268147 8.1:-11206809 MS.gene58002:CDS
CCTTGCTGCTAACGGTCTTT+TGG 0.270868 8.1:-11207889 MS.gene58002:CDS
TGTGTGTTGCAGTTGGTCTT+TGG 0.278175 8.1:-11207015 MS.gene58002:CDS
CTTTGGGCAGGGCTTATCAT+TGG 0.297148 8.1:-11206998 MS.gene58002:CDS
TGGTCTTGGTGGGTCTTCTA+TGG 0.297643 8.1:-11207787 MS.gene58002:CDS
AACTTGTTCAAGATTTACTA+TGG 0.318254 8.1:-11207849 MS.gene58002:CDS
TTGTGTGGGTCTGACCCTTT+TGG 0.320070 8.1:+11205630 None:intergenic
TGCTCACACCCCTTATTGTT+GGG 0.330688 8.1:-11206109 MS.gene58002:CDS
CCACACAAGGCAGCAGTTAT+TGG 0.333559 8.1:-11205615 MS.gene58002:CDS
CAACACCATTCCTGGCTTGA+TGG 0.334758 8.1:-11206222 MS.gene58002:CDS
GGTATGGGATCCGATCTATT+TGG 0.336012 8.1:-11207504 MS.gene58002:CDS
CATCCAACACTGGCGGTGCT+TGG 0.340460 8.1:-11205860 MS.gene58002:CDS
TTGAAGATGGTGAAGGAAGC+TGG 0.341010 8.1:+11207219 None:intergenic
TGGTGTCCTCGCTGGATCTT+TGG 0.346234 8.1:-11206060 MS.gene58002:CDS
AGACAATTCAACACCATTCC+TGG 0.346508 8.1:-11206230 MS.gene58002:CDS
CAGTTATTGGTGACACCATT+GGG 0.357049 8.1:-11205602 MS.gene58002:CDS
TTTGAGGCCATCACTGGTTA+TGG 0.357242 8.1:-11207807 MS.gene58002:CDS
GTTGCTTCTATCTCTTCCTT+TGG 0.368920 8.1:-11207447 MS.gene58002:CDS
TTCGGTGTGGAGACACTCTC+TGG 0.369966 8.1:-11206080 MS.gene58002:CDS
TGTTATATTTGGCCTTGCCT+TGG 0.372360 8.1:-11206798 MS.gene58002:CDS
GTGTGTTGCAGTTGGTCTTT+GGG 0.377712 8.1:-11207014 MS.gene58002:CDS
CTCTTCCTTGGCTCTGTGGA+AGG 0.380915 8.1:-11208152 MS.gene58002:CDS
ATGCTCACACCCCTTATTGT+TGG 0.381031 8.1:-11206110 MS.gene58002:CDS
TTCAGATCAGGTGCAGTTAT+GGG 0.386158 8.1:-11207918 MS.gene58002:CDS
CGTTGGGGATATTGCTGGTA+TGG 0.388711 8.1:-11207520 MS.gene58002:CDS
TCAGTTATTTCTGGTTTCCT+TGG 0.393651 8.1:-11208020 MS.gene58002:CDS
GGTGTTGCTGTTGCTGCACT+TGG 0.400760 8.1:-11206698 MS.gene58002:CDS
CATCGGTTCTCTCACGAATT+CGG 0.403169 8.1:+11206579 None:intergenic
GTTATATTTGGCCTTGCCTT+GGG 0.405894 8.1:-11206797 MS.gene58002:CDS
GCTCCTTTCTTTGCAACCCA+TGG 0.405971 8.1:-11205504 MS.gene58002:CDS
TAAATGCTATGGTGCTGAAA+AGG 0.407077 8.1:+11208060 None:intergenic
ATCTTTGGTGTCTGGTGTAC+AGG 0.412298 8.1:-11206045 MS.gene58002:intron
ATTCAGATCAGGTGCAGTTA+TGG 0.413964 8.1:-11207919 MS.gene58002:CDS
GTATGCATCGATGGCTAATC+CGG 0.414328 8.1:+11206655 None:intergenic
TTCATTACTGCATTCAGATC+AGG 0.414796 8.1:-11207930 MS.gene58002:CDS
GCCATCACTGGTTATGGTCT+TGG 0.417083 8.1:-11207801 MS.gene58002:CDS
CAACGCCCTTTCTTGCCTCA+AGG 0.422448 8.1:+11207961 None:intergenic
GGTCCAGAGGTGTCCTTCAA+TGG 0.422469 8.1:+11205576 None:intergenic
GTAAATCTTGAACAAGTTGA+TGG 0.422772 8.1:+11207854 None:intergenic
GCTGATGGCAGTTGAGTCTC+TGG 0.422778 8.1:-11205532 MS.gene58002:CDS
CTCGCTGGATCTTTGGTGTC+TGG 0.426677 8.1:-11206053 MS.gene58002:CDS
CAAGTACGTGGGAATCTTCA+TGG 0.428775 8.1:-11208198 MS.gene58002:CDS
ATCACTGGTTATGGTCTTGG+TGG 0.432124 8.1:-11207798 MS.gene58002:CDS
GCAAGAAGCCTTGGTCCAAA+AGG 0.433599 8.1:-11205645 MS.gene58002:CDS
GGTGCCTTTGTGAGCCGAGC+TGG 0.435196 8.1:-11206389 MS.gene58002:CDS
CCAATAACTGCTGCCTTGTG+TGG 0.436149 8.1:+11205615 None:intergenic
CCCACAGAACTGATGATAAG+AGG 0.438120 8.1:+11207393 None:intergenic
GTTGCAGTTGGTCTTTGGGC+AGG 0.438761 8.1:-11207010 MS.gene58002:CDS
ATCCAACACTGGCGGTGCTT+GGG 0.444820 8.1:-11205859 MS.gene58002:CDS
AACCACCCTTGAGGCAAGAA+AGG 0.444906 8.1:-11207967 MS.gene58002:CDS
GCAGTTATTGGTGACACCAT+TGG 0.446881 8.1:-11205603 MS.gene58002:CDS
GTAACACATGTGGCATAGTC+AGG 0.448839 8.1:+11206185 None:intergenic
TTGGAATTGCTATTGTTAGT+TGG 0.450940 8.1:-11207251 MS.gene58002:CDS
GGAAACACAACTGCCGCCAT+TGG 0.451423 8.1:-11206542 MS.gene58002:CDS
GTCCAGAGGTGTCCTTCAAT+GGG 0.452390 8.1:+11205577 None:intergenic
GGGTCTTCTATGGCTTTGTT+CGG 0.458010 8.1:-11207777 MS.gene58002:CDS
CAAAGAGAGCCAAAGAAACA+AGG 0.458032 8.1:+11206411 None:intergenic
AGATTTACTATGGTGATGAC+TGG 0.461354 8.1:-11207839 MS.gene58002:CDS
CCCTCTTATCATCAGTTCTG+TGG 0.464167 8.1:-11207394 MS.gene58002:CDS
GTTGCAGACTCCTGCAGGAC+TGG 0.464772 8.1:-11206833 MS.gene58002:CDS
ACCATAGCATTTATCCTTGG+TGG 0.465564 8.1:-11208050 MS.gene58002:CDS
ACACTCTCTGGTGTCCTCGC+TGG 0.466870 8.1:-11206068 MS.gene58002:CDS
CCTCCAGCATTGTCACTGAT+TGG 0.467423 8.1:+11206629 None:intergenic
AACGCCCTTTCTTGCCTCAA+GGG 0.467758 8.1:+11207962 None:intergenic
GGATTTCTTGGATCATCCTC+GGG 0.469581 8.1:+11207678 None:intergenic
CACCATTGGGGACCCATTGA+AGG 0.471314 8.1:-11205589 MS.gene58002:CDS
AAAAGGGCTGTGGCAAGAGC+TGG 0.473440 8.1:+11208077 None:intergenic
GGTCTATTTGAGGCCATCAC+TGG 0.480212 8.1:-11207813 MS.gene58002:CDS
CCTCTTATCATCAGTTCTGT+GGG 0.481204 8.1:-11207393 MS.gene58002:CDS
CTATTCTTGTGTGTTGCAGT+TGG 0.482326 8.1:-11207022 MS.gene58002:CDS
CGTACTTGTACATGGTGAAA+AGG 0.483733 8.1:+11208213 None:intergenic
AGCACCATAGCATTTATCCT+TGG 0.487659 8.1:-11208053 MS.gene58002:CDS
ACAATGTTGGTGATAACGTT+GGG 0.492556 8.1:-11207536 MS.gene58002:CDS
TGGATTTCTTGGATCATCCT+CGG 0.494783 8.1:+11207677 None:intergenic
CAACTGCCATCAGCTTGATA+AGG 0.501293 8.1:+11205541 None:intergenic
TGAAGATGGTGAAGGAAGCT+GGG 0.502083 8.1:+11207220 None:intergenic
CCACCATGGGTTGCAAAGAA+AGG 0.505012 8.1:+11205501 None:intergenic
TCAACTGCATTGATGACTGT+TGG 0.505025 8.1:-11207270 MS.gene58002:CDS
TTGCAGTTGGTCTTTGGGCA+GGG 0.505574 8.1:-11207009 MS.gene58002:CDS
GGTAGCAGCACCAGTCCTGC+AGG 0.507352 8.1:+11206823 None:intergenic
GATGGCTAATCCGGTGGCTA+TGG 0.508187 8.1:+11206664 None:intergenic
AGCAAACCAATGAAAACCTT+GGG 0.508866 8.1:+11206341 None:intergenic
GATGTTGGTGCCGATCTTGT+TGG 0.509172 8.1:-11207720 MS.gene58002:CDS
TCAGAGCATGCAAGAAGCCT+TGG 0.509728 8.1:-11205654 MS.gene58002:CDS
TTCAACCTTGCCAACAAGAT+CGG 0.511156 8.1:+11207710 None:intergenic
ATGGCTTTGTTCGGAAGAGT+TGG 0.512141 8.1:-11207768 MS.gene58002:CDS
AGCAACAGCAACACCATACA+TGG 0.513377 8.1:+11206706 None:intergenic
GGATTTCTCCTTGCTGCTAA+CGG 0.513420 8.1:-11207897 MS.gene58002:CDS
CTGCTCTCCAAAATTGAAGA+TGG 0.515163 8.1:+11207206 None:intergenic
GCTTTGTTCGGAAGAGTTGG+TGG 0.519191 8.1:-11207765 MS.gene58002:CDS
ACCGATGCTCTTGATGCTGC+AGG 0.520524 8.1:-11206563 MS.gene58002:CDS
TGGAAGTGCTGCTCTGAAGA+TGG 0.523019 8.1:-11206267 MS.gene58002:CDS
AAGATGTTGCAGACTCCTGC+AGG 0.523943 8.1:-11206838 MS.gene58002:CDS
TGACTGGGGTGGTCTATTTG+AGG 0.523950 8.1:-11207823 MS.gene58002:CDS
GACCCATTGAAGGACACCTC+TGG 0.527996 8.1:-11205579 MS.gene58002:CDS
AGCAGAAGGATGTCAAGAAC+TGG 0.528099 8.1:-11207188 MS.gene58002:intron
GCCATGACAATGAAGAGTGT+TGG 0.528269 8.1:-11206287 MS.gene58002:CDS
CATCGTAAGTGCAAGGCTGA+TGG 0.530211 8.1:+11208117 None:intergenic
ATCCCAAGCACCGCCAGTGT+TGG 0.530439 8.1:+11205857 None:intergenic
ATCTTGTTGGCAAGGTTGAA+AGG 0.530674 8.1:-11207707 MS.gene58002:CDS
GTCATGGCAGAAAACCAGTA+AGG 0.531717 8.1:+11206302 None:intergenic
ATCAAAGAAATGATCCCTCC+TGG 0.531761 8.1:-11206143 MS.gene58002:CDS
AAATGCTATGGTGCTGAAAA+GGG 0.531934 8.1:+11208061 None:intergenic
TCCAACACTCTTCATTGTCA+TGG 0.532917 8.1:+11206286 None:intergenic
ACCACCCTTGAGGCAAGAAA+GGG 0.533995 8.1:-11207966 MS.gene58002:CDS
CAAGAAGCCTTGGTCCAAAA+GGG 0.535298 8.1:-11205644 MS.gene58002:CDS
AAGCAAACCAATGAAAACCT+TGG 0.536015 8.1:+11206340 None:intergenic
ATTCCTCTTCCTTGGCTCTG+TGG 0.539512 8.1:-11208156 MS.gene58002:CDS
GCTATCTCTGCATCCAACAC+TGG 0.543336 8.1:-11205870 MS.gene58002:CDS
CCTTTCTTTGCAACCCATGG+TGG 0.543391 8.1:-11205501 MS.gene58002:CDS
TACACTAAGGCTGCTGATGT+TGG 0.545128 8.1:-11207735 MS.gene58002:CDS
GTCCTTCAATGGGTCCCCAA+TGG 0.547134 8.1:+11205587 None:intergenic
TCCTGCAGCATCAAGAGCAT+CGG 0.548191 8.1:+11206562 None:intergenic
CACAACTGCCGCCATTGGAA+AGG 0.550654 8.1:-11206537 MS.gene58002:intron
GCAGTTCCCTCCATCAAGCC+AGG 0.551469 8.1:+11206212 None:intergenic
AGTTGATGTGCTGACTCCCA+AGG 0.553587 8.1:-11206357 MS.gene58002:CDS
TGCATATGAACCAAATAGAT+CGG 0.553889 8.1:+11207494 None:intergenic
GGCAAGAAAGGGCGTTGGAA+AGG 0.554268 8.1:-11207955 MS.gene58002:CDS
GTGAGCATAACAAGGGCACC+AGG 0.555207 8.1:+11206125 None:intergenic
TGCTGCTCTGAAGATGGTTG+AGG 0.555346 8.1:-11206261 MS.gene58002:CDS
CATTTCTTTGATAGATGCGT+CGG 0.557439 8.1:+11206154 None:intergenic
ACCATTCCTGGCTTGATGGA+GGG 0.558249 8.1:-11206218 MS.gene58002:CDS
AAGAGATAGAAGCAACAACA+AGG 0.558692 8.1:+11207454 None:intergenic
TCACTGGTTATGGTCTTGGT+GGG 0.560023 8.1:-11207797 MS.gene58002:CDS
GGAGTCTGCAACATCTTGCA+CGG 0.560535 8.1:+11206844 None:intergenic
CTTCCACAGAGCCAAGGAAG+AGG 0.560904 8.1:+11208153 None:intergenic
GGTCCAATCAGTGACAATGC+TGG 0.560909 8.1:-11206632 MS.gene58002:CDS
ACTATACTAGCAATGCATAC+AGG 0.561275 8.1:-11206961 MS.gene58002:intron
TTGTTCGGAAGAGTTGGTGG+AGG 0.562229 8.1:-11207762 MS.gene58002:CDS
GCCCTTTCTTGCCTCAAGGG+TGG 0.562532 8.1:+11207965 None:intergenic
TTCTTTGATAGATGCGTCGG+TGG 0.563054 8.1:+11206157 None:intergenic
ACATGTGGCATAGTCAGGCT+TGG 0.567248 8.1:+11206190 None:intergenic
GTTGGGGATATTGCTGGTAT+GGG 0.568892 8.1:-11207519 MS.gene58002:CDS
CACCATTCCTGGCTTGATGG+AGG 0.568985 8.1:-11206219 MS.gene58002:CDS
GATTCCCACGTACTTGTACA+TGG 0.569899 8.1:+11208205 None:intergenic
GATTGGACCGTATGCATCGA+TGG 0.572500 8.1:+11206646 None:intergenic
GGAGGTATTGCTGAGATGGC+AGG 0.572852 8.1:-11206611 MS.gene58002:CDS
TAAGGGGTGTGAGCATAACA+AGG 0.573917 8.1:+11206117 None:intergenic
TGCTGGAGGTATTGCTGAGA+TGG 0.574265 8.1:-11206615 MS.gene58002:CDS
GATAACGTTGGGGATATTGC+TGG 0.576011 8.1:-11207525 MS.gene58002:CDS
TGGTGCCGATCTTGTTGGCA+AGG 0.576582 8.1:-11207715 MS.gene58002:CDS
CCAAAAGACCGTTAGCAGCA+AGG 0.576784 8.1:+11207889 None:intergenic
TAACATCCTTATCAAGCTGA+TGG 0.577115 8.1:-11205547 MS.gene58002:CDS
GGCAAGGCCAAATATAACAT+TGG 0.577576 8.1:+11206802 None:intergenic
CAATAACTGCTGCCTTGTGT+GGG 0.580560 8.1:+11205616 None:intergenic
ACCAAGACCATAACCAGTGA+TGG 0.582504 8.1:+11207800 None:intergenic
CTTGAGGCAAGAAAGGGCGT+TGG 0.582955 8.1:-11207960 MS.gene58002:CDS
TCCCTCCATCAAGCCAGGAA+TGG 0.583262 8.1:+11206217 None:intergenic
TCCAAAATTGAAGATGGTGA+AGG 0.584840 8.1:+11207212 None:intergenic
TTAGTTTCATCGTAAGTGCA+AGG 0.586245 8.1:+11208110 None:intergenic
GAGTCTGCAACATCTTGCAC+GGG 0.592696 8.1:+11206845 None:intergenic
CCACAGAACTGATGATAAGA+GGG 0.599774 8.1:+11207394 None:intergenic
AGAAAACCAGTAAGGGAGCA+TGG 0.600833 8.1:+11206310 None:intergenic
CTTGAAGAGGAGACCACCAT+GGG 0.604286 8.1:+11205488 None:intergenic
AAAGAGAGCCAAAGAAACAA+GGG 0.606463 8.1:+11206412 None:intergenic
TGGTGGAGGTATCTACACTA+AGG 0.607692 8.1:-11207748 MS.gene58002:CDS
ATGTTGAGTACCATAGCCAC+CGG 0.609968 8.1:-11206674 MS.gene58002:CDS
GATTTACTATGGTGATGACT+GGG 0.611965 8.1:-11207838 MS.gene58002:CDS
TTGATAAGGATGTTAAGAGA+TGG 0.613675 8.1:+11205555 None:intergenic
TCTATTTGGTTCATATGCAG+AGG 0.613857 8.1:-11207490 MS.gene58002:CDS
GGAAAACCAAACCTTTCCAA+TGG 0.618190 8.1:+11206526 None:intergenic
CAGGTGATTGCTGACAATGT+TGG 0.619742 8.1:-11207549 MS.gene58002:CDS
GGATTAGCCATCGATGCATA+CGG 0.622392 8.1:-11206653 MS.gene58002:CDS
GCCACCAAGGATAAATGCTA+TGG 0.623803 8.1:+11208049 None:intergenic
ATCTCTGCATCCAACACTGG+CGG 0.624448 8.1:-11205867 MS.gene58002:CDS
TCAAATCTTAGATCTTGAAG+AGG 0.626578 8.1:+11205475 None:intergenic
TATGGTGCTGAAAAGGGCTG+TGG 0.628781 8.1:+11208067 None:intergenic
TCATGGCAGAAAACCAGTAA+GGG 0.629537 8.1:+11206303 None:intergenic
AGGTGGTGAGCAAACAAACA+AGG 0.629796 8.1:+11207367 None:intergenic
TGAATCCTTCCACAGAGCCA+AGG 0.631485 8.1:+11208147 None:intergenic
GAGAGCCAAAGAAACAAGGG+CGG 0.640186 8.1:+11206415 None:intergenic
AAACCAAACCTTTCCAATGG+CGG 0.642452 8.1:+11206529 None:intergenic
CAACTGTAGTAATACCAGCT+CGG 0.643018 8.1:+11206375 None:intergenic
TAATGCCAAGAAGTACATTG+AGG 0.647080 8.1:-11205835 MS.gene58002:intron
GACAATGTTGGTGATAACGT+TGG 0.648753 8.1:-11207537 MS.gene58002:CDS
TCTTGAAGAGGAGACCACCA+TGG 0.649845 8.1:+11205487 None:intergenic
CAGACTTGTATCCCAAGGCA+AGG 0.653796 8.1:+11206786 None:intergenic
GAACTCATGATTCACTCCAA+AGG 0.654676 8.1:+11207431 None:intergenic
AGAGATAGAAGCAACAACAA+GGG 0.655868 8.1:+11207455 None:intergenic
GCATAACAAGGGCACCAGGA+GGG 0.657047 8.1:+11206129 None:intergenic
TTTCACCATGTACAAGTACG+TGG 0.657279 8.1:-11208210 MS.gene58002:CDS
ATGATAAGAGGGAACAACAT+GGG 0.657960 8.1:+11207405 None:intergenic
TAACTGATGTGATGCCACCA+AGG 0.658904 8.1:+11208036 None:intergenic
GATAACAGACTTGTATCCCA+AGG 0.661520 8.1:+11206781 None:intergenic
TTCACCATGTACAAGTACGT+GGG 0.664598 8.1:-11208209 MS.gene58002:CDS
GATGATAAGAGGGAACAACA+TGG 0.672373 8.1:+11207404 None:intergenic
AGTTATTGGTGACACCATTG+GGG 0.672869 8.1:-11205601 MS.gene58002:CDS
AAGGCTTCTTGCATGCTCTG+AGG 0.672909 8.1:+11205656 None:intergenic
TGCATCGATGGCTAATCCGG+TGG 0.674325 8.1:+11206658 None:intergenic
AAAAGGGTCAGACCCACACA+AGG 0.677344 8.1:-11205628 MS.gene58002:CDS
GGTGGAGATTGTAACACATG+TGG 0.683683 8.1:+11206175 None:intergenic
CCAATCAGTGACAATGCTGG+AGG 0.685325 8.1:-11206629 MS.gene58002:CDS
AGCATAACAAGGGCACCAGG+AGG 0.687438 8.1:+11206128 None:intergenic
AATACCAGCTCGGCTCACAA+AGG 0.689932 8.1:+11206385 None:intergenic
AAAGTCGGTTGCAAATAAGG+TGG 0.692903 8.1:+11207350 None:intergenic
TACTATGGTGATGACTGGGG+TGG 0.694658 8.1:-11207834 MS.gene58002:CDS
GAATGCAAGAACCACCCTTG+AGG 0.706507 8.1:-11207976 MS.gene58002:CDS
GATGTTAAGAGATGGTCCAG+AGG 0.708307 8.1:+11205563 None:intergenic
CAATGTTGGTGATAACGTTG+GGG 0.708816 8.1:-11207535 MS.gene58002:CDS
GAATGGTGTTGAATTGTCTG+CGG 0.717933 8.1:+11206234 None:intergenic
GGTTGAAAGGAACATTCCCG+AGG 0.725543 8.1:-11207694 MS.gene58002:CDS
TGGTGAGCAAACAAACAAGG+AGG 0.740387 8.1:+11207370 None:intergenic
ATTTACTATGGTGATGACTG+GGG 0.741489 8.1:-11207837 MS.gene58002:CDS
AAGGGGTGTGAGCATAACAA+GGG 0.744003 8.1:+11206118 None:intergenic
CAGACACCAAAGATCCAGCG+AGG 0.761300 8.1:+11206054 None:intergenic
GTACGTGGGAATCTTCATGG+TGG 0.787196 8.1:-11208195 MS.gene58002:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTTATAAAGGAAAAA+AGG + chr8.1:11206088-11206107 None:intergenic 15.0%
!! AATGTTTATAAAGGAAAAAA+GGG + chr8.1:11206087-11206106 None:intergenic 15.0%
!! ATCATTATTTAATAATAGAC+TGG + chr8.1:11206609-11206628 None:intergenic 15.0%
!! TTATTAAATAATGATCTGAA+TGG - chr8.1:11206614-11206633 MS.gene58002:CDS 15.0%
!! AACAAAAATACTAATTGCAA+TGG + chr8.1:11206966-11206985 None:intergenic 20.0%
!! ATATAATCAACTAGATGAAT+GGG + chr8.1:11206805-11206824 None:intergenic 20.0%
!! ATTTATTTAGTAAGCTATTC+AGG - chr8.1:11207709-11207728 MS.gene58002:CDS 20.0%
!! TTTATTTAGTAAGCTATTCA+GGG - chr8.1:11207710-11207729 MS.gene58002:CDS 20.0%
!!! TTAAATTAATTTTTGCACTG+TGG - chr8.1:11207794-11207813 MS.gene58002:CDS 20.0%
! AAGTTTGATCTCAAAAAAGT+CGG + chr8.1:11206376-11206395 None:intergenic 25.0%
! ATATGATGTTACTCTGTTAT+AGG - chr8.1:11207252-11207271 MS.gene58002:CDS 25.0%
! ATGAATAAAACAGATTGAAC+TGG + chr8.1:11207223-11207242 None:intergenic 25.0%
! ATTCATACAGACATAAACAA+AGG + chr8.1:11206127-11206146 None:intergenic 25.0%
! ATTCTATATGATATGCTGTT+GGG - chr8.1:11207970-11207989 MS.gene58002:CDS 25.0%
! CATATAATCAACTAGATGAA+TGG + chr8.1:11206806-11206825 None:intergenic 25.0%
! TATAATCAACTAGATGAATG+GGG + chr8.1:11206804-11206823 None:intergenic 25.0%
! TATGATGTTACTCTGTTATA+GGG - chr8.1:11207253-11207272 MS.gene58002:CDS 25.0%
! TGTGTCGAAATAATTGTTAA+TGG - chr8.1:11206576-11206595 MS.gene58002:CDS 25.0%
! TTATTAAAGACTCATCCATT+TGG - chr8.1:11208004-11208023 MS.gene58002:CDS 25.0%
! TTTAATATCTTAGTACTCAC+TGG - chr8.1:11206641-11206660 MS.gene58002:CDS 25.0%
!! AACTTGTTCAAGATTTACTA+TGG - chr8.1:11205859-11205878 MS.gene58002:CDS 25.0%
!!! TATGAATCCTTGTTTTATTC+AGG - chr8.1:11206140-11206159 MS.gene58002:CDS 25.0%
!!! TTTTGAGATCAAACTTGTAA+AGG - chr8.1:11206380-11206399 MS.gene58002:CDS 25.0%
AAAAAAGTCGGTTGCAAATA+AGG + chr8.1:11206364-11206383 None:intergenic 30.0%
AAAAAGATCCCAACAATAAG+GGG + chr8.1:11207610-11207629 None:intergenic 30.0%
AATTATTTCGACACAAAAGC+AGG + chr8.1:11206571-11206590 None:intergenic 30.0%
ACGTTTCATAGCTTATTGTT+AGG - chr8.1:11206544-11206563 MS.gene58002:CDS 30.0%
ATGATGTTACTCTGTTATAG+GGG - chr8.1:11207254-11207273 MS.gene58002:CDS 30.0%
ATTTACCTCAATGTACTTCT+TGG + chr8.1:11207881-11207900 None:intergenic 30.0%
CTAATTGCAATGGCAAAAAT+TGG + chr8.1:11206956-11206975 None:intergenic 30.0%
CTAGTTGATTATATGCTAAC+TGG - chr8.1:11206811-11206830 MS.gene58002:CDS 30.0%
GAAAAAGATCCCAACAATAA+GGG + chr8.1:11207611-11207630 None:intergenic 30.0%
GATTCTATATGATATGCTGT+TGG - chr8.1:11207969-11207988 MS.gene58002:CDS 30.0%
GTGTACAGGTAATTAATGTT+TGG - chr8.1:11207677-11207696 MS.gene58002:CDS 30.0%
TGCATATGAACCAAATAGAT+CGG + chr8.1:11206217-11206236 None:intergenic 30.0%
TTGATAAGGATGTTAAGAGA+TGG + chr8.1:11208156-11208175 None:intergenic 30.0%
! AAGTTGCAATTTTCATTCCA+AGG + chr8.1:11205708-11205727 None:intergenic 30.0%
! ATTAATTTTTGCACTGTGGT+TGG - chr8.1:11207798-11207817 MS.gene58002:CDS 30.0%
! CTTATTGTTGGGATCTTTTT+CGG - chr8.1:11207610-11207629 MS.gene58002:intron 30.0%
! GTAAATCTTGAACAAGTTGA+TGG + chr8.1:11205857-11205876 None:intergenic 30.0%
! TTGGAATTGCTATTGTTAGT+TGG - chr8.1:11206457-11206476 MS.gene58002:intron 30.0%
!! ATTTTGATATTCCTCTTCCT+TGG - chr8.1:11205544-11205563 MS.gene58002:CDS 30.0%
AAAGAGAGCCAAAGAAACAA+GGG + chr8.1:11207299-11207318 None:intergenic 35.0%
AACTGGTTAAAGAGAGAAAG+AGG + chr8.1:11207206-11207225 None:intergenic 35.0%
AAGAGATAGAAGCAACAACA+AGG + chr8.1:11206257-11206276 None:intergenic 35.0%
AAGCAAACCAATGAAAACCT+TGG + chr8.1:11207371-11207390 None:intergenic 35.0%
ACTATACTAGCAATGCATAC+AGG - chr8.1:11206747-11206766 MS.gene58002:CDS 35.0%
AGAGATAGAAGCAACAACAA+GGG + chr8.1:11206256-11206275 None:intergenic 35.0%
AGCAAACCAATGAAAACCTT+GGG + chr8.1:11207370-11207389 None:intergenic 35.0%
AGCAGACAACAAAATGAAGT+AGG + chr8.1:11207738-11207757 None:intergenic 35.0%
AGGATGTAATTTCTTACAGC+TGG + chr8.1:11206054-11206073 None:intergenic 35.0%
ATGATAAGAGGGAACAACAT+GGG + chr8.1:11206306-11206325 None:intergenic 35.0%
CATTTCTTTGATAGATGCGT+CGG + chr8.1:11207557-11207576 None:intergenic 35.0%
CGAAAAAGATCCCAACAATA+AGG + chr8.1:11207612-11207631 None:intergenic 35.0%
GCAATCACCTGAATAAAACA+AGG + chr8.1:11206150-11206169 None:intergenic 35.0%
GCTGCTACCAATGTTATATT+TGG - chr8.1:11206899-11206918 MS.gene58002:intron 35.0%
TAACATCCTTATCAAGCTGA+TGG - chr8.1:11208161-11208180 MS.gene58002:CDS 35.0%
TCCAAAATTGAAGATGGTGA+AGG + chr8.1:11206499-11206518 None:intergenic 35.0%
TTAGTTTCATCGTAAGTGCA+AGG + chr8.1:11205601-11205620 None:intergenic 35.0%
TTCATTACTGCATTCAGATC+AGG - chr8.1:11205778-11205797 MS.gene58002:intron 35.0%
TTTCTTACAGCTGGATTTCT+TGG + chr8.1:11206045-11206064 None:intergenic 35.0%
! AAATGCTATGGTGCTGAAAA+GGG + chr8.1:11205650-11205669 None:intergenic 35.0%
! AGATTTACTATGGTGATGAC+TGG - chr8.1:11205869-11205888 MS.gene58002:CDS 35.0%
! ATTTACTATGGTGATGACTG+GGG - chr8.1:11205871-11205890 MS.gene58002:CDS 35.0%
! GAAAAAAGGGAACTAGTTTC+AGG + chr8.1:11206074-11206093 None:intergenic 35.0%
! GATTTACTATGGTGATGACT+GGG - chr8.1:11205870-11205889 MS.gene58002:CDS 35.0%
! TAAATGCTATGGTGCTGAAA+AGG + chr8.1:11205651-11205670 None:intergenic 35.0%
! TAATGCCAAGAAGTACATTG+AGG - chr8.1:11207873-11207892 MS.gene58002:CDS 35.0%
! TCCTTCACCATCTTCAATTT+TGG - chr8.1:11206495-11206514 MS.gene58002:intron 35.0%
! TCTATTTGGTTCATATGCAG+AGG - chr8.1:11206218-11206237 MS.gene58002:CDS 35.0%
!! ACAATGTTGGTGATAACGTT+GGG - chr8.1:11206172-11206191 MS.gene58002:CDS 35.0%
!! AGTACTCACTGGATTGATTT+TGG - chr8.1:11206652-11206671 MS.gene58002:CDS 35.0%
!! TCAGTTATTTCTGGTTTCCT+TGG - chr8.1:11205688-11205707 MS.gene58002:intron 35.0%
!! TTTCAAGTTGCAACACCAAA+TGG + chr8.1:11208022-11208041 None:intergenic 35.0%
!!! ACAAGCTGTTTTTTCAATGC+AGG + chr8.1:11206414-11206433 None:intergenic 35.0%
!!! GTTTTCATTGGTTTGCTTGT+TGG - chr8.1:11207373-11207392 MS.gene58002:CDS 35.0%
AAACCAAACCTTTCCAATGG+CGG + chr8.1:11207182-11207201 None:intergenic 40.0%
AAAGTCGGTTGCAAATAAGG+TGG + chr8.1:11206361-11206380 None:intergenic 40.0%
ACCATAGCATTTATCCTTGG+TGG - chr8.1:11205658-11205677 MS.gene58002:CDS 40.0%
AGACAATTCAACACCATTCC+TGG - chr8.1:11207478-11207497 MS.gene58002:CDS 40.0%
AGCACCATAGCATTTATCCT+TGG - chr8.1:11205655-11205674 MS.gene58002:CDS 40.0%
ATCAAAGAAATGATCCCTCC+TGG - chr8.1:11207565-11207584 MS.gene58002:intron 40.0%
ATCTTGTTGGCAAGGTTGAA+AGG - chr8.1:11206001-11206020 MS.gene58002:intron 40.0%
ATTCAGATCAGGTGCAGTTA+TGG - chr8.1:11205789-11205808 MS.gene58002:intron 40.0%
CAAAGAGAGCCAAAGAAACA+AGG + chr8.1:11207300-11207319 None:intergenic 40.0%
CAACTGTAGTAATACCAGCT+CGG + chr8.1:11207336-11207355 None:intergenic 40.0%
CCACAGAACTGATGATAAGA+GGG + chr8.1:11206317-11206336 None:intergenic 40.0%
CCTCTTATCATCAGTTCTGT+GGG - chr8.1:11206315-11206334 MS.gene58002:CDS 40.0%
CGTACTTGTACATGGTGAAA+AGG + chr8.1:11205498-11205517 None:intergenic 40.0%
CTATTCTTGTGTGTTGCAGT+TGG - chr8.1:11206686-11206705 MS.gene58002:CDS 40.0%
CTGCTCTCCAAAATTGAAGA+TGG + chr8.1:11206505-11206524 None:intergenic 40.0%
GAACTCATGATTCACTCCAA+AGG + chr8.1:11206280-11206299 None:intergenic 40.0%
GATAACAGACTTGTATCCCA+AGG + chr8.1:11206930-11206949 None:intergenic 40.0%
GATGATAAGAGGGAACAACA+TGG + chr8.1:11206307-11206326 None:intergenic 40.0%
GGAAAACCAAACCTTTCCAA+TGG + chr8.1:11207185-11207204 None:intergenic 40.0%
GGCAAGGCCAAATATAACAT+TGG + chr8.1:11206909-11206928 None:intergenic 40.0%
GTTGCTTCTATCTCTTCCTT+TGG - chr8.1:11206261-11206280 MS.gene58002:CDS 40.0%
TCATGGCAGAAAACCAGTAA+GGG + chr8.1:11207408-11207427 None:intergenic 40.0%
TCCAACACTCTTCATTGTCA+TGG + chr8.1:11207425-11207444 None:intergenic 40.0%
TGCATACAGGTAAGCAATCA+TGG - chr8.1:11206760-11206779 MS.gene58002:CDS 40.0%
TGGATTTCTTGGATCATCCT+CGG + chr8.1:11206034-11206053 None:intergenic 40.0%
TTCAACCTTGCCAACAAGAT+CGG + chr8.1:11206001-11206020 None:intergenic 40.0%
TTCACCATGTACAAGTACGT+GGG - chr8.1:11205499-11205518 MS.gene58002:CDS 40.0%
TTCAGATCAGGTGCAGTTAT+GGG - chr8.1:11205790-11205809 MS.gene58002:intron 40.0%
TTTCACCATGTACAAGTACG+TGG - chr8.1:11205498-11205517 MS.gene58002:CDS 40.0%
! AGTTATTGGTGACACCATTG+GGG - chr8.1:11208107-11208126 MS.gene58002:CDS 40.0%
! CAGTTATTGGTGACACCATT+GGG - chr8.1:11208106-11208125 MS.gene58002:CDS 40.0%
! GAATGGTGTTGAATTGTCTG+CGG + chr8.1:11207477-11207496 None:intergenic 40.0%
! GGCATCACATCAGTTATTTC+TGG - chr8.1:11205679-11205698 MS.gene58002:intron 40.0%
! TCAACTGCATTGATGACTGT+TGG - chr8.1:11206438-11206457 MS.gene58002:intron 40.0%
! TTCAGTTTTGCTGCCATGTA+TGG - chr8.1:11206989-11207008 MS.gene58002:CDS 40.0%
!! CAATGTTGGTGATAACGTTG+GGG - chr8.1:11206173-11206192 MS.gene58002:CDS 40.0%
!! CTGTTATAGGGGTTTGCTAT+TGG - chr8.1:11207265-11207284 MS.gene58002:CDS 40.0%
!! CTTCAATTTTGGAGAGCAGA+AGG - chr8.1:11206506-11206525 MS.gene58002:intron 40.0%
!! CTTGTTTCTTTGGCTCTCTT+TGG - chr8.1:11207298-11207317 MS.gene58002:CDS 40.0%
!! GACAATGTTGGTGATAACGT+TGG - chr8.1:11206171-11206190 MS.gene58002:CDS 40.0%
!! GTTATATTTGGCCTTGCCTT+GGG - chr8.1:11206911-11206930 MS.gene58002:intron 40.0%
!! TGTTATATTTGGCCTTGCCT+TGG - chr8.1:11206910-11206929 MS.gene58002:intron 40.0%
!! TTGGTGTTGCAACTTGAAAC+AGG - chr8.1:11208023-11208042 MS.gene58002:CDS 40.0%
ACCAAGACCATAACCAGTGA+TGG + chr8.1:11205911-11205930 None:intergenic 45.0%
AGAAAACCAGTAAGGGAGCA+TGG + chr8.1:11207401-11207420 None:intergenic 45.0%
AGCAACAGCAACACCATACA+TGG + chr8.1:11207005-11207024 None:intergenic 45.0%
AGCAGAAGGATGTCAAGAAC+TGG - chr8.1:11206520-11206539 MS.gene58002:intron 45.0%
AGGTGGTGAGCAAACAAACA+AGG + chr8.1:11206344-11206363 None:intergenic 45.0%
ATGCTCACACCCCTTATTGT+TGG - chr8.1:11207598-11207617 MS.gene58002:intron 45.0%
ATGTTGAGTACCATAGCCAC+CGG - chr8.1:11207034-11207053 MS.gene58002:intron 45.0%
CAACTGCCATCAGCTTGATA+AGG + chr8.1:11208170-11208189 None:intergenic 45.0%
CAAGAAGCCTTGGTCCAAAA+GGG - chr8.1:11208064-11208083 MS.gene58002:CDS 45.0%
CAAGTACGTGGGAATCTTCA+TGG - chr8.1:11205510-11205529 MS.gene58002:CDS 45.0%
CAATAACTGCTGCCTTGTGT+GGG + chr8.1:11208095-11208114 None:intergenic 45.0%
CAGGTGATTGCTGACAATGT+TGG - chr8.1:11206159-11206178 MS.gene58002:CDS 45.0%
CCCACAGAACTGATGATAAG+AGG + chr8.1:11206318-11206337 None:intergenic 45.0%
CCCTCTTATCATCAGTTCTG+TGG - chr8.1:11206314-11206333 MS.gene58002:CDS 45.0%
GATAACGTTGGGGATATTGC+TGG - chr8.1:11206183-11206202 MS.gene58002:CDS 45.0%
GATGTTAAGAGATGGTCCAG+AGG + chr8.1:11208148-11208167 None:intergenic 45.0%
GATTCCCACGTACTTGTACA+TGG + chr8.1:11205506-11205525 None:intergenic 45.0%
GCCACCAAGGATAAATGCTA+TGG + chr8.1:11205662-11205681 None:intergenic 45.0%
GGATTTCTCCTTGCTGCTAA+CGG - chr8.1:11205811-11205830 MS.gene58002:intron 45.0%
GGATTTCTTGGATCATCCTC+GGG + chr8.1:11206033-11206052 None:intergenic 45.0%
GGTATGGGATCCGATCTATT+TGG - chr8.1:11206204-11206223 MS.gene58002:CDS 45.0%
GGTGGAGATTGTAACACATG+TGG + chr8.1:11207536-11207555 None:intergenic 45.0%
GTAACACATGTGGCATAGTC+AGG + chr8.1:11207526-11207545 None:intergenic 45.0%
GTCATGGCAGAAAACCAGTA+AGG + chr8.1:11207409-11207428 None:intergenic 45.0%
GTTGGGGATATTGCTGGTAT+GGG - chr8.1:11206189-11206208 MS.gene58002:CDS 45.0%
TAACTGATGTGATGCCACCA+AGG + chr8.1:11205675-11205694 None:intergenic 45.0%
TACACTAAGGCTGCTGATGT+TGG - chr8.1:11205973-11205992 MS.gene58002:intron 45.0%
TGAAGATGGTGAAGGAAGCT+GGG + chr8.1:11206491-11206510 None:intergenic 45.0%
TGCTCACACCCCTTATTGTT+GGG - chr8.1:11207599-11207618 MS.gene58002:intron 45.0%
TGGTGAGCAAACAAACAAGG+AGG + chr8.1:11206341-11206360 None:intergenic 45.0%
TGTTGCAACTTGAAACAGGC+TGG - chr8.1:11208027-11208046 MS.gene58002:CDS 45.0%
TTCTTTGATAGATGCGTCGG+TGG + chr8.1:11207554-11207573 None:intergenic 45.0%
TTGAAGATGGTGAAGGAAGC+TGG + chr8.1:11206492-11206511 None:intergenic 45.0%
! AAGGGGTGTGAGCATAACAA+GGG + chr8.1:11207593-11207612 None:intergenic 45.0%
! ATCACTGGTTATGGTCTTGG+TGG - chr8.1:11205910-11205929 MS.gene58002:intron 45.0%
! CTGACTCCCAAGGTTTTCAT+TGG - chr8.1:11207361-11207380 MS.gene58002:CDS 45.0%
! GCAGTTATTGGTGACACCAT+TGG - chr8.1:11208105-11208124 MS.gene58002:CDS 45.0%
! GCCATGACAATGAAGAGTGT+TGG - chr8.1:11207421-11207440 MS.gene58002:CDS 45.0%
! GTATGCATCGATGGCTAATC+CGG + chr8.1:11207056-11207075 None:intergenic 45.0%
! TAAGGGGTGTGAGCATAACA+AGG + chr8.1:11207594-11207613 None:intergenic 45.0%
! TCACTGGTTATGGTCTTGGT+GGG - chr8.1:11205911-11205930 MS.gene58002:intron 45.0%
! TTTGAGGCCATCACTGGTTA+TGG - chr8.1:11205901-11205920 MS.gene58002:intron 45.0%
!! ATCTTTGGTGTCTGGTGTAC+AGG - chr8.1:11207663-11207682 MS.gene58002:intron 45.0%
!! ATGGCTTTGTTCGGAAGAGT+TGG - chr8.1:11205940-11205959 MS.gene58002:intron 45.0%
!! CATCGGTTCTCTCACGAATT+CGG + chr8.1:11207132-11207151 None:intergenic 45.0%
!! GGATTAGCCATCGATGCATA+CGG - chr8.1:11207055-11207074 MS.gene58002:intron 45.0%
!! GGGTCTTCTATGGCTTTGTT+CGG - chr8.1:11205931-11205950 MS.gene58002:intron 45.0%
!! GTGTGTTGCAGTTGGTCTTT+GGG - chr8.1:11206694-11206713 MS.gene58002:CDS 45.0%
!! TGGTGGAGGTATCTACACTA+AGG - chr8.1:11205960-11205979 MS.gene58002:intron 45.0%
!! TGTGTGTTGCAGTTGGTCTT+TGG - chr8.1:11206693-11206712 MS.gene58002:CDS 45.0%
!!! CTGGATTGATTTTGGCTTGC+AGG - chr8.1:11206660-11206679 MS.gene58002:CDS 45.0%
!!! TGTTGGGATCTTTTTCGGTG+TGG - chr8.1:11207615-11207634 MS.gene58002:intron 45.0%
!! AAAAATAAAAATGTTTATAA+AGG + chr8.1:11206096-11206115 None:intergenic 5.0%
AAAAGGGTCAGACCCACACA+AGG - chr8.1:11208080-11208099 MS.gene58002:CDS 50.0%
AACCACCCTTGAGGCAAGAA+AGG - chr8.1:11205741-11205760 MS.gene58002:intron 50.0%
AACGCCCTTTCTTGCCTCAA+GGG + chr8.1:11205749-11205768 None:intergenic 50.0%
AAGATGTTGCAGACTCCTGC+AGG - chr8.1:11206870-11206889 MS.gene58002:intron 50.0%
AAGGCTTCTTGCATGCTCTG+AGG + chr8.1:11208055-11208074 None:intergenic 50.0%
AATACCAGCTCGGCTCACAA+AGG + chr8.1:11207326-11207345 None:intergenic 50.0%
ACATGTGGCATAGTCAGGCT+TGG + chr8.1:11207521-11207540 None:intergenic 50.0%
ACCACCCTTGAGGCAAGAAA+GGG - chr8.1:11205742-11205761 MS.gene58002:intron 50.0%
ATCTCTGCATCCAACACTGG+CGG - chr8.1:11207841-11207860 MS.gene58002:CDS 50.0%
CAGACTTGTATCCCAAGGCA+AGG + chr8.1:11206925-11206944 None:intergenic 50.0%
CATCGTAAGTGCAAGGCTGA+TGG + chr8.1:11205594-11205613 None:intergenic 50.0%
CCAAAAGACCGTTAGCAGCA+AGG + chr8.1:11205822-11205841 None:intergenic 50.0%
CCAATAACTGCTGCCTTGTG+TGG + chr8.1:11208096-11208115 None:intergenic 50.0%
CCAATCAGTGACAATGCTGG+AGG - chr8.1:11207079-11207098 MS.gene58002:intron 50.0%
CCACACAAGGCAGCAGTTAT+TGG - chr8.1:11208093-11208112 MS.gene58002:CDS 50.0%
CCTCCAGCATTGTCACTGAT+TGG + chr8.1:11207082-11207101 None:intergenic 50.0%
CCTTTCTTTGCAACCCATGG+TGG - chr8.1:11208207-11208226 MS.gene58002:CDS 50.0%
CGTTGGGGATATTGCTGGTA+TGG - chr8.1:11206188-11206207 MS.gene58002:CDS 50.0%
CTTGAAGAGGAGACCACCAT+GGG + chr8.1:11208223-11208242 None:intergenic 50.0%
CTTTGGGCAGGGCTTATCAT+TGG - chr8.1:11206710-11206729 MS.gene58002:CDS 50.0%
GAATGCAAGAACCACCCTTG+AGG - chr8.1:11205732-11205751 MS.gene58002:intron 50.0%
GAGAGCCAAAGAAACAAGGG+CGG + chr8.1:11207296-11207315 None:intergenic 50.0%
GAGTCTGCAACATCTTGCAC+GGG + chr8.1:11206866-11206885 None:intergenic 50.0%
GATTGGACCGTATGCATCGA+TGG + chr8.1:11207065-11207084 None:intergenic 50.0%
GCAAGAAGCCTTGGTCCAAA+AGG - chr8.1:11208063-11208082 MS.gene58002:CDS 50.0%
GCTATCTCTGCATCCAACAC+TGG - chr8.1:11207838-11207857 MS.gene58002:CDS 50.0%
GCTCCTTTCTTTGCAACCCA+TGG - chr8.1:11208204-11208223 MS.gene58002:CDS 50.0%
GGAGTCTGCAACATCTTGCA+CGG + chr8.1:11206867-11206886 None:intergenic 50.0%
GGTCCAATCAGTGACAATGC+TGG - chr8.1:11207076-11207095 MS.gene58002:intron 50.0%
GGTTGAAAGGAACATTCCCG+AGG - chr8.1:11206014-11206033 MS.gene58002:intron 50.0%
GTACGTGGGAATCTTCATGG+TGG - chr8.1:11205513-11205532 MS.gene58002:CDS 50.0%
TCAGAGCATGCAAGAAGCCT+TGG - chr8.1:11208054-11208073 MS.gene58002:CDS 50.0%
TCTTGAAGAGGAGACCACCA+TGG + chr8.1:11208224-11208243 None:intergenic 50.0%
TGAATCCTTCCACAGAGCCA+AGG + chr8.1:11205564-11205583 None:intergenic 50.0%
TGACTGGGGTGGTCTATTTG+AGG - chr8.1:11205885-11205904 MS.gene58002:intron 50.0%
TTGGTTCCATGCTCCCTTAC+TGG - chr8.1:11207392-11207411 MS.gene58002:CDS 50.0%
! ACCATTCCTGGCTTGATGGA+GGG - chr8.1:11207490-11207509 MS.gene58002:CDS 50.0%
! CAACACCATTCCTGGCTTGA+TGG - chr8.1:11207486-11207505 MS.gene58002:CDS 50.0%
! CCACCATGGGTTGCAAAGAA+AGG + chr8.1:11208210-11208229 None:intergenic 50.0%
! CCTTGCTGCTAACGGTCTTT+TGG - chr8.1:11205819-11205838 MS.gene58002:intron 50.0%
! GCCATCACTGGTTATGGTCT+TGG - chr8.1:11205907-11205926 MS.gene58002:intron 50.0%
! GCTTTGTTCGGAAGAGTTGG+TGG - chr8.1:11205943-11205962 MS.gene58002:intron 50.0%
! GGTCTATTTGAGGCCATCAC+TGG - chr8.1:11205895-11205914 MS.gene58002:intron 50.0%
! TACTATGGTGATGACTGGGG+TGG - chr8.1:11205874-11205893 MS.gene58002:CDS 50.0%
! TATGGTGCTGAAAAGGGCTG+TGG + chr8.1:11205644-11205663 None:intergenic 50.0%
! TCCTGCAGCATCAAGAGCAT+CGG + chr8.1:11207149-11207168 None:intergenic 50.0%
! TGGTCTTGGTGGGTCTTCTA+TGG - chr8.1:11205921-11205940 MS.gene58002:intron 50.0%
! TTCTGCCGCCCTTGTTTCTT+TGG - chr8.1:11207288-11207307 MS.gene58002:CDS 50.0%
! TTGTGTGGGTCTGACCCTTT+TGG + chr8.1:11208081-11208100 None:intergenic 50.0%
!! AGTTGATGTGCTGACTCCCA+AGG - chr8.1:11207351-11207370 MS.gene58002:CDS 50.0%
!! ATTCCTCTTCCTTGGCTCTG+TGG - chr8.1:11205552-11205571 MS.gene58002:CDS 50.0%
!! GATGTTGGTGCCGATCTTGT+TGG - chr8.1:11205988-11206007 MS.gene58002:intron 50.0%
!! GTCCAGAGGTGTCCTTCAAT+GGG + chr8.1:11208134-11208153 None:intergenic 50.0%
!! TGCTGCTCTGAAGATGGTTG+AGG - chr8.1:11207447-11207466 MS.gene58002:CDS 50.0%
!! TGCTGGAGGTATTGCTGAGA+TGG - chr8.1:11207093-11207112 MS.gene58002:intron 50.0%
!! TGGAAGTGCTGCTCTGAAGA+TGG - chr8.1:11207441-11207460 MS.gene58002:CDS 50.0%
!! TTGCAGTTGGTCTTTGGGCA+GGG - chr8.1:11206699-11206718 MS.gene58002:CDS 50.0%
!! TTGTTCGGAAGAGTTGGTGG+AGG - chr8.1:11205946-11205965 MS.gene58002:intron 50.0%
AAAAGGGCTGTGGCAAGAGC+TGG + chr8.1:11205634-11205653 None:intergenic 55.0%
ACCGATGCTCTTGATGCTGC+AGG - chr8.1:11207145-11207164 MS.gene58002:intron 55.0%
ATCCAACACTGGCGGTGCTT+GGG - chr8.1:11207849-11207868 MS.gene58002:CDS 55.0%
CAACGCCCTTTCTTGCCTCA+AGG + chr8.1:11205750-11205769 None:intergenic 55.0%
CACAACTGCCGCCATTGGAA+AGG - chr8.1:11207171-11207190 MS.gene58002:intron 55.0%
CACCATTGGGGACCCATTGA+AGG - chr8.1:11208119-11208138 MS.gene58002:CDS 55.0%
CAGACACCAAAGATCCAGCG+AGG + chr8.1:11207657-11207676 None:intergenic 55.0%
CTGCCGCCATTGGAAAGGTT+TGG - chr8.1:11207176-11207195 MS.gene58002:intron 55.0%
CTTCCACAGAGCCAAGGAAG+AGG + chr8.1:11205558-11205577 None:intergenic 55.0%
GACCCATTGAAGGACACCTC+TGG - chr8.1:11208129-11208148 MS.gene58002:CDS 55.0%
GATGGCTAATCCGGTGGCTA+TGG + chr8.1:11207047-11207066 None:intergenic 55.0%
GCTGATGGCAGTTGAGTCTC+TGG - chr8.1:11208176-11208195 MS.gene58002:CDS 55.0%
GGAAACACAACTGCCGCCAT+TGG - chr8.1:11207166-11207185 MS.gene58002:intron 55.0%
GTCCTTCAATGGGTCCCCAA+TGG + chr8.1:11208124-11208143 None:intergenic 55.0%
TCCCTCCATCAAGCCAGGAA+TGG + chr8.1:11207494-11207513 None:intergenic 55.0%
TGGTGTCCTCGCTGGATCTT+TGG - chr8.1:11207648-11207667 MS.gene58002:intron 55.0%
! CACCATTCCTGGCTTGATGG+AGG - chr8.1:11207489-11207508 MS.gene58002:CDS 55.0%
! CTTGAGGCAAGAAAGGGCGT+TGG - chr8.1:11205748-11205767 MS.gene58002:intron 55.0%
! GGTCTGACCCTTTTGGACCA+AGG + chr8.1:11208074-11208093 None:intergenic 55.0%
! TGCATCGATGGCTAATCCGG+TGG + chr8.1:11207053-11207072 None:intergenic 55.0%
! TTCGGTGTGGAGACACTCTC+TGG - chr8.1:11207628-11207647 MS.gene58002:intron 55.0%
!! AGCATAACAAGGGCACCAGG+AGG + chr8.1:11207583-11207602 None:intergenic 55.0%
!! CTCGCTGGATCTTTGGTGTC+TGG - chr8.1:11207655-11207674 MS.gene58002:intron 55.0%
!! CTCTTCCTTGGCTCTGTGGA+AGG - chr8.1:11205556-11205575 MS.gene58002:CDS 55.0%
!! GCATAACAAGGGCACCAGGA+GGG + chr8.1:11207582-11207601 None:intergenic 55.0%
!! GGAGGTATTGCTGAGATGGC+AGG - chr8.1:11207097-11207116 MS.gene58002:intron 55.0%
!! GGCAAGAAAGGGCGTTGGAA+AGG - chr8.1:11205753-11205772 MS.gene58002:intron 55.0%
!! GGTCCAGAGGTGTCCTTCAA+TGG + chr8.1:11208135-11208154 None:intergenic 55.0%
!! GGTGTTGCTGTTGCTGCACT+TGG - chr8.1:11207010-11207029 MS.gene58002:CDS 55.0%
!! GTGAGCATAACAAGGGCACC+AGG + chr8.1:11207586-11207605 None:intergenic 55.0%
!! GTTGCAGTTGGTCTTTGGGC+AGG - chr8.1:11206698-11206717 MS.gene58002:CDS 55.0%
!! TGGTGCCGATCTTGTTGGCA+AGG - chr8.1:11205993-11206012 MS.gene58002:intron 55.0%
ACACTCTCTGGTGTCCTCGC+TGG - chr8.1:11207640-11207659 MS.gene58002:intron 60.0%
CATCCAACACTGGCGGTGCT+TGG - chr8.1:11207848-11207867 MS.gene58002:CDS 60.0%
GCAGTTCCCTCCATCAAGCC+AGG + chr8.1:11207499-11207518 None:intergenic 60.0%
GCCCTTTCTTGCCTCAAGGG+TGG + chr8.1:11205746-11205765 None:intergenic 60.0%
GTTGCAGACTCCTGCAGGAC+TGG - chr8.1:11206875-11206894 MS.gene58002:intron 60.0%
! ATCCCAAGCACCGCCAGTGT+TGG + chr8.1:11207854-11207873 None:intergenic 60.0%
GGTAGCAGCACCAGTCCTGC+AGG + chr8.1:11206888-11206907 None:intergenic 65.0%
GGTGCCTTTGTGAGCCGAGC+TGG - chr8.1:11207319-11207338 MS.gene58002:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 11205482 11208248 11205482 ID=MS.gene58002
chr8.1 mRNA 11205482 11208248 11205482 ID=MS.gene58002.t1;Parent=MS.gene58002
chr8.1 exon 11207674 11208248 11207674 ID=MS.gene58002.t1.exon1;Parent=MS.gene58002.t1
chr8.1 CDS 11207674 11208248 11207674 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11207189 11207568 11207189 ID=MS.gene58002.t1.exon2;Parent=MS.gene58002.t1
chr8.1 CDS 11207189 11207568 11207189 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11206962 11207048 11206962 ID=MS.gene58002.t1.exon3;Parent=MS.gene58002.t1
chr8.1 CDS 11206962 11207048 11206962 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11206538 11206868 11206538 ID=MS.gene58002.t1.exon4;Parent=MS.gene58002.t1
chr8.1 CDS 11206538 11206868 11206538 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11206046 11206456 11206046 ID=MS.gene58002.t1.exon5;Parent=MS.gene58002.t1
chr8.1 CDS 11206046 11206456 11206046 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11205836 11205895 11205836 ID=MS.gene58002.t1.exon6;Parent=MS.gene58002.t1
chr8.1 CDS 11205836 11205895 11205836 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
chr8.1 exon 11205482 11205685 11205482 ID=MS.gene58002.t1.exon7;Parent=MS.gene58002.t1
chr8.1 CDS 11205482 11205685 11205482 ID=cds.MS.gene58002.t1;Parent=MS.gene58002.t1
Gene Sequence

>MS.gene58002

GATCAACATCTTTCCTTTTCACCATGTACAAGTACGTGGGAATCTTCATGGTGGCTTTTGCTATTTTGATATTCCTCTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCCATCAGCCTTGCACTTACGATGAAACTAAGATGTGTAAGCCAGCTCTTGCCACAGCCCTTTTCAGCACCATAGCATTTATCCTTGGTGGCATCACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTACGCGAATGCAAGAACCACCCTTGAGGCAAGAAAGGGCGTTGGAAAGGCTTTCATTACTGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCTAACGGTCTTTTGGTTCTTTACATTACCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTATTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTCGGAAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCCGATCTTGTTGGCAAGGTTGAAAGGAACATTCCCGAGGATGATCCAAGAAATCCAGCTGTAAGAAATTACATCCTGAAACTAGTTCCCTTTTTTCCTTTATAAACATTTTTATTTTTGATTTAAACCTTTGTTTATGTCTGTATGAATCCTTGTTTTATTCAGGTGATTGCTGACAATGTTGGTGATAACGTTGGGGATATTGCTGGTATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCTTCTATCTCTTCCTTTGGAGTGAATCATGAGTTCACTCCCATGTTGTTCCCTCTTATCATCAGTTCTGTGGGCCTCCTTGTTTGTTTGCTCACCACCTTATTTGCAACCGACTTTTTTGAGATCAAACTTGTAAAGGAAATTGAGCCTGCATTGAAAAAACAGCTTGTTATTTCAACTGCATTGATGACTGTTGGAATTGCTATTGTTAGTTGGATAGCACTCCCAGCTTCCTTCACCATCTTCAATTTTGGAGAGCAGAAGGATGTCAAGAACTGGTACGTTTCATAGCTTATTGTTAGGACCTGCTTTTGTGTCGAAATAATTGTTAATGGATTTGTTCCAGTCTATTATTAAATAATGATCTGAATGGTAATTTTAATATCTTAGTACTCACTGGATTGATTTTGGCTTGCAGGCAACTATTCTTGTGTGTTGCAGTTGGTCTTTGGGCAGGGCTTATCATTGGATTTGTTACTGAATACTATACTAGCAATGCATACAGGTAAGCAATCATGGATTCATATTTTGCATTTTCCCCATTCATCTAGTTGATTATATGCTAACTGGACTAACATTTTCTTTCTGTTTTTTGCAGTCCCGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTATGGTGTTGCTGTTGCTGCACTTGGAATGTTGAGTACCATAGCCACCGGATTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCAGGAATGAGTCACCGAATTCGTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCCGCCATTGGAAAGGTTTGGTTTTCCTCTTTCTCTCTTTAACCAGTTCAATCTGTTTTATTCATTTTCTCGATATATGATGTTACTCTGTTATAGGGGTTTGCTATTGGTTCTGCCGCCCTTGTTTCTTTGGCTCTCTTTGGTGCCTTTGTGAGCCGAGCTGGTATTACTACAGTTGATGTGCTGACTCCCAAGGTTTTCATTGGTTTGCTTGTTGGTTCCATGCTCCCTTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTCCGCAGACAATTCAACACCATTCCTGGCTTGATGGAGGGAACTGCCAAGCCTGACTATGCCACATGTGTTACAATCTCCACCGACGCATCTATCAAAGAAATGATCCCTCCTGGTGCCCTTGTTATGCTCACACCCCTTATTGTTGGGATCTTTTTCGGTGTGGAGACACTCTCTGGTGTCCTCGCTGGATCTTTGGTGTCTGGTGTACAGGTAATTAATGTTTGGTGCACTGTTATTTATTTAGTAAGCTATTCAGGGCACCTACTTCATTTTGTTGTCTGCTGCTTCTAATACAAACAATCTATTATGTATTTACTTATTAAATTAATTTTTGCACTGTGGTTGGTGTGTTCATTACAGATTGCTATCTCTGCATCCAACACTGGCGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGTAAATACTATTTTATTGAATAGTTTGAGCTGTATCAATTTGATTATGTGATGTGATATCATATGATTTTTAATGATTCTATATGATATGCTGTTGGGATGTTATTATATTATTAAAGACTCATCCATTTGGTGTTGCAACTTGAAACAGGCTGGTGCCTCAGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGACCCACACAAGGCAGCAGTTATTGGTGACACCATTGGGGACCCATTGAAGGACACCTCTGGACCATCTCTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCTCTGGTGTTTGCTCCTTTCTTTGCAACCCATGGTGGTCTCCTCTTCAAGATCTAA
Protein sequence

>MS.gene58002.t1

DQHLSFSPCTSTWESSWWLLLFUYSSSLALWKDSAQAISLALTMKLRCVSQLLPQPFSAPUHLSLVASHQLFLVSLEUKLQLTRMQEPPLRQERALERLSLLHSDQVQLWDFSLLLTVFWFFTLPSTCSRFTMVMTGVVYLRPSLVMVLVGLLWLCSEELVEVSTLRLLMLVPILLARLKGTFPRMIQEIQLULLTMLVITLGILLVWDPIYLVHMQRHLVLPLLLLLSLPLEUIMSSLPCCSLLSSVLWASLFVCSPPYLQPTFLRSNLURKLSLHUKNSLLFQLHUULLELLLLVGUHSQLPSPSSILESRRMSRTGNYSCVLQLVFGQGLSLDLLLNTILAMHTVPCKMLQTPAGLVLLPMLYLALPWDTSLLSFQFLPLQLVFLLVSVLLPCMVLLLLHLECUVPUPPDUPSMHTVQSVTMLEVLLRWQEUVTEFVREPMLLMLQETQLPPLERGLLLVLPPLFLWLSLVPLUAELVLLQLMCULPRFSLVCLLVPCSLTGFLPUQURVLEVLLURWLRKSADNSTPFLAUWRELPSLTMPHVLQSPPTHLSKKUSLLVPLLCSHPLLLGSFSVWRHSLVSSLDLWCLVYRLLSLHPTLAVLGIMPRSTLRLVPQSMQEALVQKGQTHTRQQLLVTPLGTHURTPLDHLLTSLSSUWQLSLWCLLLSLQPMVVSSSRS