AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58003

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 214 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCACCATCTTCAATTT+TGG 0.130863 8.1:-11285603 MS.gene58003:CDS
TTGGTTCCATGCTCCCTTAC+TGG 0.179425 8.1:-11284706 MS.gene58003:CDS
CTTGTTTCTTTGGCTCTCTT+TGG 0.191937 8.1:-11284800 MS.gene58003:CDS
TTCTGCCGCCCTTGTTTCTT+TGG 0.203229 8.1:-11284810 MS.gene58003:CDS
CTGTTATAGGGGTTTGCTAT+TGG 0.234420 8.1:-11284833 MS.gene58003:intron
TTTCTTACAGCTGGATTTCT+TGG 0.236124 8.1:+11286056 None:intergenic
GGCATCACATCAGTTATTTC+TGG 0.246728 8.1:-11286419 MS.gene58003:CDS
ATTTACCTCAATGTACTTCT+TGG 0.252601 8.1:+11284220 None:intergenic
GCTGCTACCAATGTTATATT+TGG 0.268147 8.1:-11285199 MS.gene58003:CDS
CCTTGCTGCTAACGGTCTTT+TGG 0.270868 8.1:-11286279 MS.gene58003:CDS
TGTGTGTTGCAGTTGGTCTT+TGG 0.278175 8.1:-11285405 MS.gene58003:CDS
CTTTGGGCAGGGCTTATCAT+TGG 0.297148 8.1:-11285388 MS.gene58003:CDS
TGGTCTTGGTGGGTCTTCTA+TGG 0.297643 8.1:-11286177 MS.gene58003:CDS
AACTTGTTCAAGATTTACTA+TGG 0.318254 8.1:-11286239 MS.gene58003:CDS
TTGTGTGGGTCTGACCCTTT+TGG 0.320070 8.1:+11284020 None:intergenic
TGCTCACACCCCTTATTGTT+GGG 0.330688 8.1:-11284499 MS.gene58003:CDS
CCACACAAGGCAGCAGTTAT+TGG 0.333559 8.1:-11284005 MS.gene58003:CDS
CAACACCATTCCTGGCTTGA+TGG 0.334758 8.1:-11284612 MS.gene58003:CDS
GGTATGGGATCCGATCTATT+TGG 0.336012 8.1:-11285894 MS.gene58003:CDS
CATCCAACACTGGCGGTGCT+TGG 0.340460 8.1:-11284250 MS.gene58003:CDS
TTGAAGATGGTGAAGGAAGC+TGG 0.341010 8.1:+11285609 None:intergenic
TGGTGTCCTCGCTGGATCTT+TGG 0.346234 8.1:-11284450 MS.gene58003:CDS
AGACAATTCAACACCATTCC+TGG 0.346508 8.1:-11284620 MS.gene58003:CDS
CAGTTATTGGTGACACCATT+GGG 0.357049 8.1:-11283992 MS.gene58003:CDS
TTTGAGGCCATCACTGGTTA+TGG 0.357242 8.1:-11286197 MS.gene58003:CDS
GTTGCTTCTATCTCTTCCTT+TGG 0.368920 8.1:-11285837 MS.gene58003:CDS
TTCGGTGTGGAGACACTCTC+TGG 0.369966 8.1:-11284470 MS.gene58003:CDS
TGTTATATTTGGCCTTGCCT+TGG 0.372360 8.1:-11285188 MS.gene58003:CDS
GTGTGTTGCAGTTGGTCTTT+GGG 0.377712 8.1:-11285404 MS.gene58003:CDS
CTCTTCCTTGGCTCTGTGGA+AGG 0.380915 8.1:-11286542 MS.gene58003:CDS
ATGCTCACACCCCTTATTGT+TGG 0.381031 8.1:-11284500 MS.gene58003:CDS
TTCAGATCAGGTGCAGTTAT+GGG 0.386158 8.1:-11286308 MS.gene58003:CDS
CGTTGGGGATATTGCTGGTA+TGG 0.388711 8.1:-11285910 MS.gene58003:CDS
TCAGTTATTTCTGGTTTCCT+TGG 0.393651 8.1:-11286410 MS.gene58003:CDS
GGTGTTGCTGTTGCTGCACT+TGG 0.400760 8.1:-11285088 MS.gene58003:CDS
CATCGGTTCTCTCACGAATT+CGG 0.403169 8.1:+11284969 None:intergenic
GTTATATTTGGCCTTGCCTT+GGG 0.405894 8.1:-11285187 MS.gene58003:CDS
GCTCCTTTCTTTGCAACCCA+TGG 0.405971 8.1:-11283894 MS.gene58003:CDS
TAAATGCTATGGTGCTGAAA+AGG 0.407077 8.1:+11286450 None:intergenic
ATCTTTGGTGTCTGGTGTAC+AGG 0.412298 8.1:-11284435 MS.gene58003:intron
ATTCAGATCAGGTGCAGTTA+TGG 0.413964 8.1:-11286309 MS.gene58003:CDS
GTATGCATCGATGGCTAATC+CGG 0.414328 8.1:+11285045 None:intergenic
TTCATTACTGCATTCAGATC+AGG 0.414796 8.1:-11286320 MS.gene58003:CDS
GCCATCACTGGTTATGGTCT+TGG 0.417083 8.1:-11286191 MS.gene58003:CDS
CAACGCCCTTTCTTGCCTCA+AGG 0.422448 8.1:+11286351 None:intergenic
GGTCCAGAGGTGTCCTTCAA+TGG 0.422469 8.1:+11283966 None:intergenic
GTAAATCTTGAACAAGTTGA+TGG 0.422772 8.1:+11286244 None:intergenic
GCTGATGGCAGTTGAGTCTC+TGG 0.422778 8.1:-11283922 MS.gene58003:CDS
CTCGCTGGATCTTTGGTGTC+TGG 0.426677 8.1:-11284443 MS.gene58003:CDS
CAAGTACGTGGGAATCTTCA+TGG 0.428775 8.1:-11286588 MS.gene58003:CDS
ATCACTGGTTATGGTCTTGG+TGG 0.432124 8.1:-11286188 MS.gene58003:CDS
GCAAGAAGCCTTGGTCCAAA+AGG 0.433599 8.1:-11284035 MS.gene58003:CDS
GGTGCCTTTGTGAGCCGAGC+TGG 0.435196 8.1:-11284779 MS.gene58003:CDS
CCAATAACTGCTGCCTTGTG+TGG 0.436149 8.1:+11284005 None:intergenic
CCCACAGAACTGATGATAAG+AGG 0.438120 8.1:+11285783 None:intergenic
GTTGCAGTTGGTCTTTGGGC+AGG 0.438761 8.1:-11285400 MS.gene58003:CDS
ATCCAACACTGGCGGTGCTT+GGG 0.444820 8.1:-11284249 MS.gene58003:CDS
AACCACCCTTGAGGCAAGAA+AGG 0.444906 8.1:-11286357 MS.gene58003:CDS
GCAGTTATTGGTGACACCAT+TGG 0.446881 8.1:-11283993 MS.gene58003:CDS
GTAACACATGTGGCATAGTC+AGG 0.448839 8.1:+11284575 None:intergenic
TTGGAATTGCTATTGTTAGT+TGG 0.450940 8.1:-11285641 MS.gene58003:CDS
GGAAACACAACTGCCGCCAT+TGG 0.451423 8.1:-11284932 MS.gene58003:CDS
GTCCAGAGGTGTCCTTCAAT+GGG 0.452390 8.1:+11283967 None:intergenic
GGGTCTTCTATGGCTTTGTT+CGG 0.458010 8.1:-11286167 MS.gene58003:CDS
CAAAGAGAGCCAAAGAAACA+AGG 0.458032 8.1:+11284801 None:intergenic
AGATTTACTATGGTGATGAC+TGG 0.461354 8.1:-11286229 MS.gene58003:CDS
CCCTCTTATCATCAGTTCTG+TGG 0.464167 8.1:-11285784 MS.gene58003:CDS
GTTGCAGACTCCTGCAGGAC+TGG 0.464772 8.1:-11285223 MS.gene58003:CDS
ACCATAGCATTTATCCTTGG+TGG 0.465564 8.1:-11286440 MS.gene58003:CDS
ACACTCTCTGGTGTCCTCGC+TGG 0.466870 8.1:-11284458 MS.gene58003:CDS
CCTCCAGCATTGTCACTGAT+TGG 0.467423 8.1:+11285019 None:intergenic
AACGCCCTTTCTTGCCTCAA+GGG 0.467758 8.1:+11286352 None:intergenic
GGATTTCTTGGATCATCCTC+GGG 0.469581 8.1:+11286068 None:intergenic
CACCATTGGGGACCCATTGA+AGG 0.471314 8.1:-11283979 MS.gene58003:CDS
AAAAGGGCTGTGGCAAGAGC+TGG 0.473440 8.1:+11286467 None:intergenic
GGTCTATTTGAGGCCATCAC+TGG 0.480212 8.1:-11286203 MS.gene58003:CDS
CCTCTTATCATCAGTTCTGT+GGG 0.481204 8.1:-11285783 MS.gene58003:CDS
CTATTCTTGTGTGTTGCAGT+TGG 0.482326 8.1:-11285412 MS.gene58003:CDS
CGTACTTGTACATGGTGAAA+AGG 0.483733 8.1:+11286603 None:intergenic
AGCACCATAGCATTTATCCT+TGG 0.487659 8.1:-11286443 MS.gene58003:CDS
ACAATGTTGGTGATAACGTT+GGG 0.492556 8.1:-11285926 MS.gene58003:CDS
TGGATTTCTTGGATCATCCT+CGG 0.494783 8.1:+11286067 None:intergenic
CAACTGCCATCAGCTTGATA+AGG 0.501293 8.1:+11283931 None:intergenic
TGAAGATGGTGAAGGAAGCT+GGG 0.502083 8.1:+11285610 None:intergenic
CCACCATGGGTTGCAAAGAA+AGG 0.505012 8.1:+11283891 None:intergenic
TCAACTGCATTGATGACTGT+TGG 0.505025 8.1:-11285660 MS.gene58003:CDS
TTGCAGTTGGTCTTTGGGCA+GGG 0.505574 8.1:-11285399 MS.gene58003:CDS
GGTAGCAGCACCAGTCCTGC+AGG 0.507352 8.1:+11285213 None:intergenic
GATGGCTAATCCGGTGGCTA+TGG 0.508187 8.1:+11285054 None:intergenic
AGCAAACCAATGAAAACCTT+GGG 0.508866 8.1:+11284731 None:intergenic
GATGTTGGTGCCGATCTTGT+TGG 0.509172 8.1:-11286110 MS.gene58003:CDS
TCAGAGCATGCAAGAAGCCT+TGG 0.509728 8.1:-11284044 MS.gene58003:CDS
TTCAACCTTGCCAACAAGAT+CGG 0.511156 8.1:+11286100 None:intergenic
ATGGCTTTGTTCGGAAGAGT+TGG 0.512141 8.1:-11286158 MS.gene58003:CDS
AGCAACAGCAACACCATACA+TGG 0.513377 8.1:+11285096 None:intergenic
GGATTTCTCCTTGCTGCTAA+CGG 0.513420 8.1:-11286287 MS.gene58003:CDS
CTGCTCTCCAAAATTGAAGA+TGG 0.515163 8.1:+11285596 None:intergenic
GCTTTGTTCGGAAGAGTTGG+TGG 0.519191 8.1:-11286155 MS.gene58003:CDS
ACCGATGCTCTTGATGCTGC+AGG 0.520524 8.1:-11284953 MS.gene58003:CDS
TGGAAGTGCTGCTCTGAAGA+TGG 0.523019 8.1:-11284657 MS.gene58003:CDS
AAGATGTTGCAGACTCCTGC+AGG 0.523943 8.1:-11285228 MS.gene58003:CDS
TGACTGGGGTGGTCTATTTG+AGG 0.523950 8.1:-11286213 MS.gene58003:CDS
GACCCATTGAAGGACACCTC+TGG 0.527996 8.1:-11283969 MS.gene58003:CDS
AGCAGAAGGATGTCAAGAAC+TGG 0.528099 8.1:-11285578 MS.gene58003:intron
GCCATGACAATGAAGAGTGT+TGG 0.528269 8.1:-11284677 MS.gene58003:CDS
CATCGTAAGTGCAAGGCTGA+TGG 0.530211 8.1:+11286507 None:intergenic
ATCCCAAGCACCGCCAGTGT+TGG 0.530439 8.1:+11284247 None:intergenic
ATCTTGTTGGCAAGGTTGAA+AGG 0.530674 8.1:-11286097 MS.gene58003:CDS
GTCATGGCAGAAAACCAGTA+AGG 0.531717 8.1:+11284692 None:intergenic
ATCAAAGAAATGATCCCTCC+TGG 0.531761 8.1:-11284533 MS.gene58003:CDS
AAATGCTATGGTGCTGAAAA+GGG 0.531934 8.1:+11286451 None:intergenic
TCCAACACTCTTCATTGTCA+TGG 0.532917 8.1:+11284676 None:intergenic
ACCACCCTTGAGGCAAGAAA+GGG 0.533995 8.1:-11286356 MS.gene58003:CDS
CAAGAAGCCTTGGTCCAAAA+GGG 0.535298 8.1:-11284034 MS.gene58003:CDS
AAGCAAACCAATGAAAACCT+TGG 0.536015 8.1:+11284730 None:intergenic
ATTCCTCTTCCTTGGCTCTG+TGG 0.539512 8.1:-11286546 MS.gene58003:CDS
GCTATCTCTGCATCCAACAC+TGG 0.543336 8.1:-11284260 MS.gene58003:CDS
CCTTTCTTTGCAACCCATGG+TGG 0.543391 8.1:-11283891 MS.gene58003:CDS
TACACTAAGGCTGCTGATGT+TGG 0.545128 8.1:-11286125 MS.gene58003:CDS
GTCCTTCAATGGGTCCCCAA+TGG 0.547134 8.1:+11283977 None:intergenic
TCCTGCAGCATCAAGAGCAT+CGG 0.548191 8.1:+11284952 None:intergenic
CACAACTGCCGCCATTGGAA+AGG 0.550654 8.1:-11284927 MS.gene58003:intron
GCAGTTCCCTCCATCAAGCC+AGG 0.551469 8.1:+11284602 None:intergenic
AGTTGATGTGCTGACTCCCA+AGG 0.553587 8.1:-11284747 MS.gene58003:CDS
TGCATATGAACCAAATAGAT+CGG 0.553889 8.1:+11285884 None:intergenic
GGCAAGAAAGGGCGTTGGAA+AGG 0.554268 8.1:-11286345 MS.gene58003:CDS
GTGAGCATAACAAGGGCACC+AGG 0.555207 8.1:+11284515 None:intergenic
TGCTGCTCTGAAGATGGTTG+AGG 0.555346 8.1:-11284651 MS.gene58003:CDS
CATTTCTTTGATAGATGCGT+CGG 0.557439 8.1:+11284544 None:intergenic
ACCATTCCTGGCTTGATGGA+GGG 0.558249 8.1:-11284608 MS.gene58003:CDS
AAGAGATAGAAGCAACAACA+AGG 0.558692 8.1:+11285844 None:intergenic
TCACTGGTTATGGTCTTGGT+GGG 0.560023 8.1:-11286187 MS.gene58003:CDS
GGAGTCTGCAACATCTTGCA+CGG 0.560535 8.1:+11285234 None:intergenic
CTTCCACAGAGCCAAGGAAG+AGG 0.560904 8.1:+11286543 None:intergenic
GGTCCAATCAGTGACAATGC+TGG 0.560909 8.1:-11285022 MS.gene58003:CDS
ACTATACTAGCAATGCATAC+AGG 0.561275 8.1:-11285351 MS.gene58003:intron
TTGTTCGGAAGAGTTGGTGG+AGG 0.562229 8.1:-11286152 MS.gene58003:CDS
GCCCTTTCTTGCCTCAAGGG+TGG 0.562532 8.1:+11286355 None:intergenic
TTCTTTGATAGATGCGTCGG+TGG 0.563054 8.1:+11284547 None:intergenic
ACATGTGGCATAGTCAGGCT+TGG 0.567248 8.1:+11284580 None:intergenic
GTTGGGGATATTGCTGGTAT+GGG 0.568892 8.1:-11285909 MS.gene58003:CDS
CACCATTCCTGGCTTGATGG+AGG 0.568985 8.1:-11284609 MS.gene58003:CDS
GATTCCCACGTACTTGTACA+TGG 0.569899 8.1:+11286595 None:intergenic
GATTGGACCGTATGCATCGA+TGG 0.572500 8.1:+11285036 None:intergenic
GGAGGTATTGCTGAGATGGC+AGG 0.572852 8.1:-11285001 MS.gene58003:CDS
TAAGGGGTGTGAGCATAACA+AGG 0.573917 8.1:+11284507 None:intergenic
TGCTGGAGGTATTGCTGAGA+TGG 0.574265 8.1:-11285005 MS.gene58003:CDS
GATAACGTTGGGGATATTGC+TGG 0.576011 8.1:-11285915 MS.gene58003:CDS
TGGTGCCGATCTTGTTGGCA+AGG 0.576582 8.1:-11286105 MS.gene58003:CDS
CCAAAAGACCGTTAGCAGCA+AGG 0.576784 8.1:+11286279 None:intergenic
TAACATCCTTATCAAGCTGA+TGG 0.577115 8.1:-11283937 MS.gene58003:CDS
GGCAAGGCCAAATATAACAT+TGG 0.577576 8.1:+11285192 None:intergenic
CAATAACTGCTGCCTTGTGT+GGG 0.580560 8.1:+11284006 None:intergenic
ACCAAGACCATAACCAGTGA+TGG 0.582504 8.1:+11286190 None:intergenic
CTTGAGGCAAGAAAGGGCGT+TGG 0.582955 8.1:-11286350 MS.gene58003:CDS
TCCCTCCATCAAGCCAGGAA+TGG 0.583262 8.1:+11284607 None:intergenic
TCCAAAATTGAAGATGGTGA+AGG 0.584840 8.1:+11285602 None:intergenic
TTAGTTTCATCGTAAGTGCA+AGG 0.586245 8.1:+11286500 None:intergenic
GAGTCTGCAACATCTTGCAC+GGG 0.592696 8.1:+11285235 None:intergenic
CCACAGAACTGATGATAAGA+GGG 0.599774 8.1:+11285784 None:intergenic
AGAAAACCAGTAAGGGAGCA+TGG 0.600833 8.1:+11284700 None:intergenic
CTTGAAGAGGAGACCACCAT+GGG 0.604286 8.1:+11283878 None:intergenic
AAAGAGAGCCAAAGAAACAA+GGG 0.606463 8.1:+11284802 None:intergenic
TGGTGGAGGTATCTACACTA+AGG 0.607692 8.1:-11286138 MS.gene58003:CDS
ATGTTGAGTACCATAGCCAC+CGG 0.609968 8.1:-11285064 MS.gene58003:CDS
GATTTACTATGGTGATGACT+GGG 0.611965 8.1:-11286228 MS.gene58003:CDS
TTGATAAGGATGTTAAGAGA+TGG 0.613675 8.1:+11283945 None:intergenic
TCTATTTGGTTCATATGCAG+AGG 0.613857 8.1:-11285880 MS.gene58003:CDS
GGAAAACCAAACCTTTCCAA+TGG 0.618190 8.1:+11284916 None:intergenic
CAGGTGATTGCTGACAATGT+TGG 0.619742 8.1:-11285939 MS.gene58003:CDS
GGATTAGCCATCGATGCATA+CGG 0.622392 8.1:-11285043 MS.gene58003:CDS
GCCACCAAGGATAAATGCTA+TGG 0.623803 8.1:+11286439 None:intergenic
ATCTCTGCATCCAACACTGG+CGG 0.624448 8.1:-11284257 MS.gene58003:CDS
TCAAATCTTAGATCTTGAAG+AGG 0.626578 8.1:+11283865 None:intergenic
TATGGTGCTGAAAAGGGCTG+TGG 0.628781 8.1:+11286457 None:intergenic
TCATGGCAGAAAACCAGTAA+GGG 0.629537 8.1:+11284693 None:intergenic
AGGTGGTGAGCAAACAAACA+AGG 0.629796 8.1:+11285757 None:intergenic
TGAATCCTTCCACAGAGCCA+AGG 0.631485 8.1:+11286537 None:intergenic
GAGAGCCAAAGAAACAAGGG+CGG 0.640186 8.1:+11284805 None:intergenic
AAACCAAACCTTTCCAATGG+CGG 0.642452 8.1:+11284919 None:intergenic
CAACTGTAGTAATACCAGCT+CGG 0.643018 8.1:+11284765 None:intergenic
TAATGCCAAGAAGTACATTG+AGG 0.647080 8.1:-11284225 MS.gene58003:intron
GACAATGTTGGTGATAACGT+TGG 0.648753 8.1:-11285927 MS.gene58003:CDS
TCTTGAAGAGGAGACCACCA+TGG 0.649845 8.1:+11283877 None:intergenic
CAGACTTGTATCCCAAGGCA+AGG 0.653796 8.1:+11285176 None:intergenic
GAACTCATGATTCACTCCAA+AGG 0.654676 8.1:+11285821 None:intergenic
AGAGATAGAAGCAACAACAA+GGG 0.655868 8.1:+11285845 None:intergenic
GCATAACAAGGGCACCAGGA+GGG 0.657047 8.1:+11284519 None:intergenic
TTTCACCATGTACAAGTACG+TGG 0.657279 8.1:-11286600 MS.gene58003:CDS
ATGATAAGAGGGAACAACAT+GGG 0.657960 8.1:+11285795 None:intergenic
TAACTGATGTGATGCCACCA+AGG 0.658904 8.1:+11286426 None:intergenic
GATAACAGACTTGTATCCCA+AGG 0.661520 8.1:+11285171 None:intergenic
TTCACCATGTACAAGTACGT+GGG 0.664598 8.1:-11286599 MS.gene58003:CDS
GATGATAAGAGGGAACAACA+TGG 0.672373 8.1:+11285794 None:intergenic
AGTTATTGGTGACACCATTG+GGG 0.672869 8.1:-11283991 MS.gene58003:CDS
AAGGCTTCTTGCATGCTCTG+AGG 0.672909 8.1:+11284046 None:intergenic
TGCATCGATGGCTAATCCGG+TGG 0.674325 8.1:+11285048 None:intergenic
AAAAGGGTCAGACCCACACA+AGG 0.677344 8.1:-11284018 MS.gene58003:CDS
GGTGGAGATTGTAACACATG+TGG 0.683683 8.1:+11284565 None:intergenic
CCAATCAGTGACAATGCTGG+AGG 0.685325 8.1:-11285019 MS.gene58003:CDS
AGCATAACAAGGGCACCAGG+AGG 0.687438 8.1:+11284518 None:intergenic
AATACCAGCTCGGCTCACAA+AGG 0.689932 8.1:+11284775 None:intergenic
AAAGTCGGTTGCAAATAAGG+TGG 0.692903 8.1:+11285740 None:intergenic
TACTATGGTGATGACTGGGG+TGG 0.694658 8.1:-11286224 MS.gene58003:CDS
GAATGCAAGAACCACCCTTG+AGG 0.706507 8.1:-11286366 MS.gene58003:CDS
GATGTTAAGAGATGGTCCAG+AGG 0.708307 8.1:+11283953 None:intergenic
CAATGTTGGTGATAACGTTG+GGG 0.708816 8.1:-11285925 MS.gene58003:CDS
GAATGGTGTTGAATTGTCTG+CGG 0.717933 8.1:+11284624 None:intergenic
GGTTGAAAGGAACATTCCCG+AGG 0.725543 8.1:-11286084 MS.gene58003:CDS
TGGTGAGCAAACAAACAAGG+AGG 0.740387 8.1:+11285760 None:intergenic
ATTTACTATGGTGATGACTG+GGG 0.741489 8.1:-11286227 MS.gene58003:CDS
AAGGGGTGTGAGCATAACAA+GGG 0.744003 8.1:+11284508 None:intergenic
CAGACACCAAAGATCCAGCG+AGG 0.761300 8.1:+11284444 None:intergenic
GTACGTGGGAATCTTCATGG+TGG 0.787196 8.1:-11286585 MS.gene58003:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTTATAAAGGAAAAA+AGG + chr8.1:11284478-11284497 None:intergenic 15.0%
!! AATGTTTATAAAGGAAAAAA+GGG + chr8.1:11284477-11284496 None:intergenic 15.0%
!! ATCATTATTTAATAATAGAC+TGG + chr8.1:11284999-11285018 None:intergenic 15.0%
!! TTATTAAATAATGATCTGAA+TGG - chr8.1:11285004-11285023 MS.gene58003:CDS 15.0%
!! AACAAAAATACTAATTGCAA+TGG + chr8.1:11285356-11285375 None:intergenic 20.0%
!! ATATAATCAACTAGATGAAT+GGG + chr8.1:11285195-11285214 None:intergenic 20.0%
!! ATTTATTTAGTAAGCTATTC+AGG - chr8.1:11286099-11286118 MS.gene58003:CDS 20.0%
!! TTTATTTAGTAAGCTATTCA+GGG - chr8.1:11286100-11286119 MS.gene58003:CDS 20.0%
!!! TTAAATTAATTTTTGCACTG+TGG - chr8.1:11286184-11286203 MS.gene58003:CDS 20.0%
! AAGTTTGATCTCAAAAAAGT+CGG + chr8.1:11284766-11284785 None:intergenic 25.0%
! ATATGATGTTACTCTGTTAT+AGG - chr8.1:11285642-11285661 MS.gene58003:CDS 25.0%
! ATGAATAAAACAGATTGAAC+TGG + chr8.1:11285613-11285632 None:intergenic 25.0%
! ATTCATACAGACATAAACAA+AGG + chr8.1:11284517-11284536 None:intergenic 25.0%
! ATTCTATATGATATGCTGTT+GGG - chr8.1:11286360-11286379 MS.gene58003:CDS 25.0%
! CATATAATCAACTAGATGAA+TGG + chr8.1:11285196-11285215 None:intergenic 25.0%
! TATAATCAACTAGATGAATG+GGG + chr8.1:11285194-11285213 None:intergenic 25.0%
! TATGATGTTACTCTGTTATA+GGG - chr8.1:11285643-11285662 MS.gene58003:CDS 25.0%
! TGTGTCGAAATAATTGTTAA+TGG - chr8.1:11284966-11284985 MS.gene58003:CDS 25.0%
! TTATTAAAGACTCATCCATT+TGG - chr8.1:11286394-11286413 MS.gene58003:CDS 25.0%
! TTTAATATCTTAGTACTCAC+TGG - chr8.1:11285031-11285050 MS.gene58003:CDS 25.0%
!! AACTTGTTCAAGATTTACTA+TGG - chr8.1:11284249-11284268 MS.gene58003:CDS 25.0%
!!! TATGAATCCTTGTTTTATTC+AGG - chr8.1:11284530-11284549 MS.gene58003:CDS 25.0%
!!! TTTTGAGATCAAACTTGTAA+AGG - chr8.1:11284770-11284789 MS.gene58003:CDS 25.0%
AAAAAAGTCGGTTGCAAATA+AGG + chr8.1:11284754-11284773 None:intergenic 30.0%
AAAAAGATCCCAACAATAAG+GGG + chr8.1:11286000-11286019 None:intergenic 30.0%
AATTATTTCGACACAAAAGC+AGG + chr8.1:11284961-11284980 None:intergenic 30.0%
ACGTTTCATAGCTTATTGTT+AGG - chr8.1:11284934-11284953 MS.gene58003:CDS 30.0%
ATGATGTTACTCTGTTATAG+GGG - chr8.1:11285644-11285663 MS.gene58003:CDS 30.0%
ATTTACCTCAATGTACTTCT+TGG + chr8.1:11286271-11286290 None:intergenic 30.0%
CTAATTGCAATGGCAAAAAT+TGG + chr8.1:11285346-11285365 None:intergenic 30.0%
CTAGTTGATTATATGCTAAC+TGG - chr8.1:11285201-11285220 MS.gene58003:CDS 30.0%
GAAAAAGATCCCAACAATAA+GGG + chr8.1:11286001-11286020 None:intergenic 30.0%
GATTCTATATGATATGCTGT+TGG - chr8.1:11286359-11286378 MS.gene58003:CDS 30.0%
GTGTACAGGTAATTAATGTT+TGG - chr8.1:11286067-11286086 MS.gene58003:CDS 30.0%
TGCATATGAACCAAATAGAT+CGG + chr8.1:11284607-11284626 None:intergenic 30.0%
TTGATAAGGATGTTAAGAGA+TGG + chr8.1:11286546-11286565 None:intergenic 30.0%
! AAGTTGCAATTTTCATTCCA+AGG + chr8.1:11284098-11284117 None:intergenic 30.0%
! ATTAATTTTTGCACTGTGGT+TGG - chr8.1:11286188-11286207 MS.gene58003:CDS 30.0%
! CTTATTGTTGGGATCTTTTT+CGG - chr8.1:11286000-11286019 MS.gene58003:intron 30.0%
! GTAAATCTTGAACAAGTTGA+TGG + chr8.1:11284247-11284266 None:intergenic 30.0%
! TTGGAATTGCTATTGTTAGT+TGG - chr8.1:11284847-11284866 MS.gene58003:intron 30.0%
!! ATTTTGATATTCCTCTTCCT+TGG - chr8.1:11283934-11283953 MS.gene58003:CDS 30.0%
AAAGAGAGCCAAAGAAACAA+GGG + chr8.1:11285689-11285708 None:intergenic 35.0%
AACTGGTTAAAGAGAGAAAG+AGG + chr8.1:11285596-11285615 None:intergenic 35.0%
AAGAGATAGAAGCAACAACA+AGG + chr8.1:11284647-11284666 None:intergenic 35.0%
AAGCAAACCAATGAAAACCT+TGG + chr8.1:11285761-11285780 None:intergenic 35.0%
ACTATACTAGCAATGCATAC+AGG - chr8.1:11285137-11285156 MS.gene58003:CDS 35.0%
AGAGATAGAAGCAACAACAA+GGG + chr8.1:11284646-11284665 None:intergenic 35.0%
AGCAAACCAATGAAAACCTT+GGG + chr8.1:11285760-11285779 None:intergenic 35.0%
AGCAGACAACAAAATGAAGT+AGG + chr8.1:11286128-11286147 None:intergenic 35.0%
AGGATGTAATTTCTTACAGC+TGG + chr8.1:11284444-11284463 None:intergenic 35.0%
ATGATAAGAGGGAACAACAT+GGG + chr8.1:11284696-11284715 None:intergenic 35.0%
CATTTCTTTGATAGATGCGT+CGG + chr8.1:11285947-11285966 None:intergenic 35.0%
CGAAAAAGATCCCAACAATA+AGG + chr8.1:11286002-11286021 None:intergenic 35.0%
GCAATCACCTGAATAAAACA+AGG + chr8.1:11284540-11284559 None:intergenic 35.0%
GCTGCTACCAATGTTATATT+TGG - chr8.1:11285289-11285308 MS.gene58003:intron 35.0%
TAACATCCTTATCAAGCTGA+TGG - chr8.1:11286551-11286570 MS.gene58003:CDS 35.0%
TCCAAAATTGAAGATGGTGA+AGG + chr8.1:11284889-11284908 None:intergenic 35.0%
TTAGTTTCATCGTAAGTGCA+AGG + chr8.1:11283991-11284010 None:intergenic 35.0%
TTCATTACTGCATTCAGATC+AGG - chr8.1:11284168-11284187 MS.gene58003:intron 35.0%
TTTCTTACAGCTGGATTTCT+TGG + chr8.1:11284435-11284454 None:intergenic 35.0%
! AAATGCTATGGTGCTGAAAA+GGG + chr8.1:11284040-11284059 None:intergenic 35.0%
! AGATTTACTATGGTGATGAC+TGG - chr8.1:11284259-11284278 MS.gene58003:CDS 35.0%
! ATTTACTATGGTGATGACTG+GGG - chr8.1:11284261-11284280 MS.gene58003:CDS 35.0%
! GAAAAAAGGGAACTAGTTTC+AGG + chr8.1:11284464-11284483 None:intergenic 35.0%
! GATTTACTATGGTGATGACT+GGG - chr8.1:11284260-11284279 MS.gene58003:CDS 35.0%
! TAAATGCTATGGTGCTGAAA+AGG + chr8.1:11284041-11284060 None:intergenic 35.0%
! TAATGCCAAGAAGTACATTG+AGG - chr8.1:11286263-11286282 MS.gene58003:CDS 35.0%
! TCCTTCACCATCTTCAATTT+TGG - chr8.1:11284885-11284904 MS.gene58003:intron 35.0%
! TCTATTTGGTTCATATGCAG+AGG - chr8.1:11284608-11284627 MS.gene58003:CDS 35.0%
!! ACAATGTTGGTGATAACGTT+GGG - chr8.1:11284562-11284581 MS.gene58003:CDS 35.0%
!! AGTACTCACTGGATTGATTT+TGG - chr8.1:11285042-11285061 MS.gene58003:CDS 35.0%
!! TCAGTTATTTCTGGTTTCCT+TGG - chr8.1:11284078-11284097 MS.gene58003:intron 35.0%
!! TTTCAAGTTGCAACACCAAA+TGG + chr8.1:11286412-11286431 None:intergenic 35.0%
!!! ACAAGCTGTTTTTTCAATGC+AGG + chr8.1:11284804-11284823 None:intergenic 35.0%
!!! GTTTTCATTGGTTTGCTTGT+TGG - chr8.1:11285763-11285782 MS.gene58003:CDS 35.0%
AAACCAAACCTTTCCAATGG+CGG + chr8.1:11285572-11285591 None:intergenic 40.0%
AAAGTCGGTTGCAAATAAGG+TGG + chr8.1:11284751-11284770 None:intergenic 40.0%
ACCATAGCATTTATCCTTGG+TGG - chr8.1:11284048-11284067 MS.gene58003:CDS 40.0%
AGACAATTCAACACCATTCC+TGG - chr8.1:11285868-11285887 MS.gene58003:CDS 40.0%
AGCACCATAGCATTTATCCT+TGG - chr8.1:11284045-11284064 MS.gene58003:CDS 40.0%
ATCAAAGAAATGATCCCTCC+TGG - chr8.1:11285955-11285974 MS.gene58003:intron 40.0%
ATCTTGTTGGCAAGGTTGAA+AGG - chr8.1:11284391-11284410 MS.gene58003:intron 40.0%
ATTCAGATCAGGTGCAGTTA+TGG - chr8.1:11284179-11284198 MS.gene58003:intron 40.0%
CAAAGAGAGCCAAAGAAACA+AGG + chr8.1:11285690-11285709 None:intergenic 40.0%
CAACTGTAGTAATACCAGCT+CGG + chr8.1:11285726-11285745 None:intergenic 40.0%
CCACAGAACTGATGATAAGA+GGG + chr8.1:11284707-11284726 None:intergenic 40.0%
CCTCTTATCATCAGTTCTGT+GGG - chr8.1:11284705-11284724 MS.gene58003:CDS 40.0%
CGTACTTGTACATGGTGAAA+AGG + chr8.1:11283888-11283907 None:intergenic 40.0%
CTATTCTTGTGTGTTGCAGT+TGG - chr8.1:11285076-11285095 MS.gene58003:CDS 40.0%
CTGCTCTCCAAAATTGAAGA+TGG + chr8.1:11284895-11284914 None:intergenic 40.0%
GAACTCATGATTCACTCCAA+AGG + chr8.1:11284670-11284689 None:intergenic 40.0%
GATAACAGACTTGTATCCCA+AGG + chr8.1:11285320-11285339 None:intergenic 40.0%
GATGATAAGAGGGAACAACA+TGG + chr8.1:11284697-11284716 None:intergenic 40.0%
GGAAAACCAAACCTTTCCAA+TGG + chr8.1:11285575-11285594 None:intergenic 40.0%
GGCAAGGCCAAATATAACAT+TGG + chr8.1:11285299-11285318 None:intergenic 40.0%
GTTGCTTCTATCTCTTCCTT+TGG - chr8.1:11284651-11284670 MS.gene58003:CDS 40.0%
TCATGGCAGAAAACCAGTAA+GGG + chr8.1:11285798-11285817 None:intergenic 40.0%
TCCAACACTCTTCATTGTCA+TGG + chr8.1:11285815-11285834 None:intergenic 40.0%
TGCATACAGGTAAGCAATCA+TGG - chr8.1:11285150-11285169 MS.gene58003:CDS 40.0%
TGGATTTCTTGGATCATCCT+CGG + chr8.1:11284424-11284443 None:intergenic 40.0%
TTCAACCTTGCCAACAAGAT+CGG + chr8.1:11284391-11284410 None:intergenic 40.0%
TTCACCATGTACAAGTACGT+GGG - chr8.1:11283889-11283908 MS.gene58003:CDS 40.0%
TTCAGATCAGGTGCAGTTAT+GGG - chr8.1:11284180-11284199 MS.gene58003:intron 40.0%
TTTCACCATGTACAAGTACG+TGG - chr8.1:11283888-11283907 MS.gene58003:CDS 40.0%
! AGTTATTGGTGACACCATTG+GGG - chr8.1:11286497-11286516 MS.gene58003:CDS 40.0%
! CAGTTATTGGTGACACCATT+GGG - chr8.1:11286496-11286515 MS.gene58003:CDS 40.0%
! GAATGGTGTTGAATTGTCTG+CGG + chr8.1:11285867-11285886 None:intergenic 40.0%
! GGCATCACATCAGTTATTTC+TGG - chr8.1:11284069-11284088 MS.gene58003:intron 40.0%
! TCAACTGCATTGATGACTGT+TGG - chr8.1:11284828-11284847 MS.gene58003:intron 40.0%
! TTCAGTTTTGCTGCCATGTA+TGG - chr8.1:11285379-11285398 MS.gene58003:CDS 40.0%
!! CAATGTTGGTGATAACGTTG+GGG - chr8.1:11284563-11284582 MS.gene58003:CDS 40.0%
!! CTGTTATAGGGGTTTGCTAT+TGG - chr8.1:11285655-11285674 MS.gene58003:CDS 40.0%
!! CTTCAATTTTGGAGAGCAGA+AGG - chr8.1:11284896-11284915 MS.gene58003:intron 40.0%
!! CTTGTTTCTTTGGCTCTCTT+TGG - chr8.1:11285688-11285707 MS.gene58003:CDS 40.0%
!! GACAATGTTGGTGATAACGT+TGG - chr8.1:11284561-11284580 MS.gene58003:CDS 40.0%
!! GTTATATTTGGCCTTGCCTT+GGG - chr8.1:11285301-11285320 MS.gene58003:intron 40.0%
!! TGTTATATTTGGCCTTGCCT+TGG - chr8.1:11285300-11285319 MS.gene58003:intron 40.0%
!! TTGGTGTTGCAACTTGAAAC+AGG - chr8.1:11286413-11286432 MS.gene58003:CDS 40.0%
ACCAAGACCATAACCAGTGA+TGG + chr8.1:11284301-11284320 None:intergenic 45.0%
AGAAAACCAGTAAGGGAGCA+TGG + chr8.1:11285791-11285810 None:intergenic 45.0%
AGCAACAGCAACACCATACA+TGG + chr8.1:11285395-11285414 None:intergenic 45.0%
AGCAGAAGGATGTCAAGAAC+TGG - chr8.1:11284910-11284929 MS.gene58003:intron 45.0%
AGGTGGTGAGCAAACAAACA+AGG + chr8.1:11284734-11284753 None:intergenic 45.0%
ATGCTCACACCCCTTATTGT+TGG - chr8.1:11285988-11286007 MS.gene58003:intron 45.0%
ATGTTGAGTACCATAGCCAC+CGG - chr8.1:11285424-11285443 MS.gene58003:intron 45.0%
CAACTGCCATCAGCTTGATA+AGG + chr8.1:11286560-11286579 None:intergenic 45.0%
CAAGAAGCCTTGGTCCAAAA+GGG - chr8.1:11286454-11286473 MS.gene58003:CDS 45.0%
CAAGTACGTGGGAATCTTCA+TGG - chr8.1:11283900-11283919 MS.gene58003:CDS 45.0%
CAATAACTGCTGCCTTGTGT+GGG + chr8.1:11286485-11286504 None:intergenic 45.0%
CAGGTGATTGCTGACAATGT+TGG - chr8.1:11284549-11284568 MS.gene58003:CDS 45.0%
CCCACAGAACTGATGATAAG+AGG + chr8.1:11284708-11284727 None:intergenic 45.0%
CCCTCTTATCATCAGTTCTG+TGG - chr8.1:11284704-11284723 MS.gene58003:CDS 45.0%
GATAACGTTGGGGATATTGC+TGG - chr8.1:11284573-11284592 MS.gene58003:CDS 45.0%
GATGTTAAGAGATGGTCCAG+AGG + chr8.1:11286538-11286557 None:intergenic 45.0%
GATTCCCACGTACTTGTACA+TGG + chr8.1:11283896-11283915 None:intergenic 45.0%
GCCACCAAGGATAAATGCTA+TGG + chr8.1:11284052-11284071 None:intergenic 45.0%
GGATTTCTCCTTGCTGCTAA+CGG - chr8.1:11284201-11284220 MS.gene58003:intron 45.0%
GGATTTCTTGGATCATCCTC+GGG + chr8.1:11284423-11284442 None:intergenic 45.0%
GGTATGGGATCCGATCTATT+TGG - chr8.1:11284594-11284613 MS.gene58003:CDS 45.0%
GGTGGAGATTGTAACACATG+TGG + chr8.1:11285926-11285945 None:intergenic 45.0%
GTAACACATGTGGCATAGTC+AGG + chr8.1:11285916-11285935 None:intergenic 45.0%
GTCATGGCAGAAAACCAGTA+AGG + chr8.1:11285799-11285818 None:intergenic 45.0%
GTTGGGGATATTGCTGGTAT+GGG - chr8.1:11284579-11284598 MS.gene58003:CDS 45.0%
TAACTGATGTGATGCCACCA+AGG + chr8.1:11284065-11284084 None:intergenic 45.0%
TACACTAAGGCTGCTGATGT+TGG - chr8.1:11284363-11284382 MS.gene58003:intron 45.0%
TGAAGATGGTGAAGGAAGCT+GGG + chr8.1:11284881-11284900 None:intergenic 45.0%
TGCTCACACCCCTTATTGTT+GGG - chr8.1:11285989-11286008 MS.gene58003:intron 45.0%
TGGTGAGCAAACAAACAAGG+AGG + chr8.1:11284731-11284750 None:intergenic 45.0%
TGTTGCAACTTGAAACAGGC+TGG - chr8.1:11286417-11286436 MS.gene58003:CDS 45.0%
TTCTTTGATAGATGCGTCGG+TGG + chr8.1:11285944-11285963 None:intergenic 45.0%
TTGAAGATGGTGAAGGAAGC+TGG + chr8.1:11284882-11284901 None:intergenic 45.0%
! AAGGGGTGTGAGCATAACAA+GGG + chr8.1:11285983-11286002 None:intergenic 45.0%
! ATCACTGGTTATGGTCTTGG+TGG - chr8.1:11284300-11284319 MS.gene58003:intron 45.0%
! CTGACTCCCAAGGTTTTCAT+TGG - chr8.1:11285751-11285770 MS.gene58003:CDS 45.0%
! GCAGTTATTGGTGACACCAT+TGG - chr8.1:11286495-11286514 MS.gene58003:CDS 45.0%
! GCCATGACAATGAAGAGTGT+TGG - chr8.1:11285811-11285830 MS.gene58003:CDS 45.0%
! GTATGCATCGATGGCTAATC+CGG + chr8.1:11285446-11285465 None:intergenic 45.0%
! TAAGGGGTGTGAGCATAACA+AGG + chr8.1:11285984-11286003 None:intergenic 45.0%
! TCACTGGTTATGGTCTTGGT+GGG - chr8.1:11284301-11284320 MS.gene58003:intron 45.0%
! TTTGAGGCCATCACTGGTTA+TGG - chr8.1:11284291-11284310 MS.gene58003:intron 45.0%
!! ATCTTTGGTGTCTGGTGTAC+AGG - chr8.1:11286053-11286072 MS.gene58003:intron 45.0%
!! ATGGCTTTGTTCGGAAGAGT+TGG - chr8.1:11284330-11284349 MS.gene58003:intron 45.0%
!! CATCGGTTCTCTCACGAATT+CGG + chr8.1:11285522-11285541 None:intergenic 45.0%
!! GGATTAGCCATCGATGCATA+CGG - chr8.1:11285445-11285464 MS.gene58003:intron 45.0%
!! GGGTCTTCTATGGCTTTGTT+CGG - chr8.1:11284321-11284340 MS.gene58003:intron 45.0%
!! GTGTGTTGCAGTTGGTCTTT+GGG - chr8.1:11285084-11285103 MS.gene58003:CDS 45.0%
!! TGGTGGAGGTATCTACACTA+AGG - chr8.1:11284350-11284369 MS.gene58003:intron 45.0%
!! TGTGTGTTGCAGTTGGTCTT+TGG - chr8.1:11285083-11285102 MS.gene58003:CDS 45.0%
!!! CTGGATTGATTTTGGCTTGC+AGG - chr8.1:11285050-11285069 MS.gene58003:CDS 45.0%
!!! TGTTGGGATCTTTTTCGGTG+TGG - chr8.1:11286005-11286024 MS.gene58003:intron 45.0%
!! AAAAATAAAAATGTTTATAA+AGG + chr8.1:11284486-11284505 None:intergenic 5.0%
AAAAGGGTCAGACCCACACA+AGG - chr8.1:11286470-11286489 MS.gene58003:CDS 50.0%
AACCACCCTTGAGGCAAGAA+AGG - chr8.1:11284131-11284150 MS.gene58003:intron 50.0%
AACGCCCTTTCTTGCCTCAA+GGG + chr8.1:11284139-11284158 None:intergenic 50.0%
AAGATGTTGCAGACTCCTGC+AGG - chr8.1:11285260-11285279 MS.gene58003:intron 50.0%
AAGGCTTCTTGCATGCTCTG+AGG + chr8.1:11286445-11286464 None:intergenic 50.0%
AATACCAGCTCGGCTCACAA+AGG + chr8.1:11285716-11285735 None:intergenic 50.0%
ACATGTGGCATAGTCAGGCT+TGG + chr8.1:11285911-11285930 None:intergenic 50.0%
ACCACCCTTGAGGCAAGAAA+GGG - chr8.1:11284132-11284151 MS.gene58003:intron 50.0%
ATCTCTGCATCCAACACTGG+CGG - chr8.1:11286231-11286250 MS.gene58003:CDS 50.0%
CAGACTTGTATCCCAAGGCA+AGG + chr8.1:11285315-11285334 None:intergenic 50.0%
CATCGTAAGTGCAAGGCTGA+TGG + chr8.1:11283984-11284003 None:intergenic 50.0%
CCAAAAGACCGTTAGCAGCA+AGG + chr8.1:11284212-11284231 None:intergenic 50.0%
CCAATAACTGCTGCCTTGTG+TGG + chr8.1:11286486-11286505 None:intergenic 50.0%
CCAATCAGTGACAATGCTGG+AGG - chr8.1:11285469-11285488 MS.gene58003:intron 50.0%
CCACACAAGGCAGCAGTTAT+TGG - chr8.1:11286483-11286502 MS.gene58003:CDS 50.0%
CCTCCAGCATTGTCACTGAT+TGG + chr8.1:11285472-11285491 None:intergenic 50.0%
CCTTTCTTTGCAACCCATGG+TGG - chr8.1:11286597-11286616 MS.gene58003:CDS 50.0%
CGTTGGGGATATTGCTGGTA+TGG - chr8.1:11284578-11284597 MS.gene58003:CDS 50.0%
CTTGAAGAGGAGACCACCAT+GGG + chr8.1:11286613-11286632 None:intergenic 50.0%
CTTTGGGCAGGGCTTATCAT+TGG - chr8.1:11285100-11285119 MS.gene58003:CDS 50.0%
GAATGCAAGAACCACCCTTG+AGG - chr8.1:11284122-11284141 MS.gene58003:intron 50.0%
GAGAGCCAAAGAAACAAGGG+CGG + chr8.1:11285686-11285705 None:intergenic 50.0%
GAGTCTGCAACATCTTGCAC+GGG + chr8.1:11285256-11285275 None:intergenic 50.0%
GATTGGACCGTATGCATCGA+TGG + chr8.1:11285455-11285474 None:intergenic 50.0%
GCAAGAAGCCTTGGTCCAAA+AGG - chr8.1:11286453-11286472 MS.gene58003:CDS 50.0%
GCTATCTCTGCATCCAACAC+TGG - chr8.1:11286228-11286247 MS.gene58003:CDS 50.0%
GCTCCTTTCTTTGCAACCCA+TGG - chr8.1:11286594-11286613 MS.gene58003:CDS 50.0%
GGAGTCTGCAACATCTTGCA+CGG + chr8.1:11285257-11285276 None:intergenic 50.0%
GGTCCAATCAGTGACAATGC+TGG - chr8.1:11285466-11285485 MS.gene58003:intron 50.0%
GGTTGAAAGGAACATTCCCG+AGG - chr8.1:11284404-11284423 MS.gene58003:intron 50.0%
GTACGTGGGAATCTTCATGG+TGG - chr8.1:11283903-11283922 MS.gene58003:CDS 50.0%
TCAGAGCATGCAAGAAGCCT+TGG - chr8.1:11286444-11286463 MS.gene58003:CDS 50.0%
TCTTGAAGAGGAGACCACCA+TGG + chr8.1:11286614-11286633 None:intergenic 50.0%
TGAATCCTTCCACAGAGCCA+AGG + chr8.1:11283954-11283973 None:intergenic 50.0%
TGACTGGGGTGGTCTATTTG+AGG - chr8.1:11284275-11284294 MS.gene58003:intron 50.0%
TTGGTTCCATGCTCCCTTAC+TGG - chr8.1:11285782-11285801 MS.gene58003:CDS 50.0%
! ACCATTCCTGGCTTGATGGA+GGG - chr8.1:11285880-11285899 MS.gene58003:CDS 50.0%
! CAACACCATTCCTGGCTTGA+TGG - chr8.1:11285876-11285895 MS.gene58003:CDS 50.0%
! CCACCATGGGTTGCAAAGAA+AGG + chr8.1:11286600-11286619 None:intergenic 50.0%
! CCTTGCTGCTAACGGTCTTT+TGG - chr8.1:11284209-11284228 MS.gene58003:intron 50.0%
! GCCATCACTGGTTATGGTCT+TGG - chr8.1:11284297-11284316 MS.gene58003:intron 50.0%
! GCTTTGTTCGGAAGAGTTGG+TGG - chr8.1:11284333-11284352 MS.gene58003:intron 50.0%
! GGTCTATTTGAGGCCATCAC+TGG - chr8.1:11284285-11284304 MS.gene58003:intron 50.0%
! TACTATGGTGATGACTGGGG+TGG - chr8.1:11284264-11284283 MS.gene58003:CDS 50.0%
! TATGGTGCTGAAAAGGGCTG+TGG + chr8.1:11284034-11284053 None:intergenic 50.0%
! TCCTGCAGCATCAAGAGCAT+CGG + chr8.1:11285539-11285558 None:intergenic 50.0%
! TGGTCTTGGTGGGTCTTCTA+TGG - chr8.1:11284311-11284330 MS.gene58003:intron 50.0%
! TTCTGCCGCCCTTGTTTCTT+TGG - chr8.1:11285678-11285697 MS.gene58003:CDS 50.0%
! TTGTGTGGGTCTGACCCTTT+TGG + chr8.1:11286471-11286490 None:intergenic 50.0%
!! AGTTGATGTGCTGACTCCCA+AGG - chr8.1:11285741-11285760 MS.gene58003:CDS 50.0%
!! ATTCCTCTTCCTTGGCTCTG+TGG - chr8.1:11283942-11283961 MS.gene58003:CDS 50.0%
!! GATGTTGGTGCCGATCTTGT+TGG - chr8.1:11284378-11284397 MS.gene58003:intron 50.0%
!! GTCCAGAGGTGTCCTTCAAT+GGG + chr8.1:11286524-11286543 None:intergenic 50.0%
!! TGCTGCTCTGAAGATGGTTG+AGG - chr8.1:11285837-11285856 MS.gene58003:CDS 50.0%
!! TGCTGGAGGTATTGCTGAGA+TGG - chr8.1:11285483-11285502 MS.gene58003:intron 50.0%
!! TGGAAGTGCTGCTCTGAAGA+TGG - chr8.1:11285831-11285850 MS.gene58003:CDS 50.0%
!! TTGCAGTTGGTCTTTGGGCA+GGG - chr8.1:11285089-11285108 MS.gene58003:CDS 50.0%
!! TTGTTCGGAAGAGTTGGTGG+AGG - chr8.1:11284336-11284355 MS.gene58003:intron 50.0%
AAAAGGGCTGTGGCAAGAGC+TGG + chr8.1:11284024-11284043 None:intergenic 55.0%
ACCGATGCTCTTGATGCTGC+AGG - chr8.1:11285535-11285554 MS.gene58003:intron 55.0%
ATCCAACACTGGCGGTGCTT+GGG - chr8.1:11286239-11286258 MS.gene58003:CDS 55.0%
CAACGCCCTTTCTTGCCTCA+AGG + chr8.1:11284140-11284159 None:intergenic 55.0%
CACAACTGCCGCCATTGGAA+AGG - chr8.1:11285561-11285580 MS.gene58003:intron 55.0%
CACCATTGGGGACCCATTGA+AGG - chr8.1:11286509-11286528 MS.gene58003:CDS 55.0%
CAGACACCAAAGATCCAGCG+AGG + chr8.1:11286047-11286066 None:intergenic 55.0%
CTGCCGCCATTGGAAAGGTT+TGG - chr8.1:11285566-11285585 MS.gene58003:intron 55.0%
CTTCCACAGAGCCAAGGAAG+AGG + chr8.1:11283948-11283967 None:intergenic 55.0%
GACCCATTGAAGGACACCTC+TGG - chr8.1:11286519-11286538 MS.gene58003:CDS 55.0%
GATGGCTAATCCGGTGGCTA+TGG + chr8.1:11285437-11285456 None:intergenic 55.0%
GCTGATGGCAGTTGAGTCTC+TGG - chr8.1:11286566-11286585 MS.gene58003:CDS 55.0%
GGAAACACAACTGCCGCCAT+TGG - chr8.1:11285556-11285575 MS.gene58003:intron 55.0%
GTCCTTCAATGGGTCCCCAA+TGG + chr8.1:11286514-11286533 None:intergenic 55.0%
TCCCTCCATCAAGCCAGGAA+TGG + chr8.1:11285884-11285903 None:intergenic 55.0%
TGGTGTCCTCGCTGGATCTT+TGG - chr8.1:11286038-11286057 MS.gene58003:intron 55.0%
! CACCATTCCTGGCTTGATGG+AGG - chr8.1:11285879-11285898 MS.gene58003:CDS 55.0%
! CTTGAGGCAAGAAAGGGCGT+TGG - chr8.1:11284138-11284157 MS.gene58003:intron 55.0%
! GGTCTGACCCTTTTGGACCA+AGG + chr8.1:11286464-11286483 None:intergenic 55.0%
! TGCATCGATGGCTAATCCGG+TGG + chr8.1:11285443-11285462 None:intergenic 55.0%
! TTCGGTGTGGAGACACTCTC+TGG - chr8.1:11286018-11286037 MS.gene58003:intron 55.0%
!! AGCATAACAAGGGCACCAGG+AGG + chr8.1:11285973-11285992 None:intergenic 55.0%
!! CTCGCTGGATCTTTGGTGTC+TGG - chr8.1:11286045-11286064 MS.gene58003:intron 55.0%
!! CTCTTCCTTGGCTCTGTGGA+AGG - chr8.1:11283946-11283965 MS.gene58003:CDS 55.0%
!! GCATAACAAGGGCACCAGGA+GGG + chr8.1:11285972-11285991 None:intergenic 55.0%
!! GGAGGTATTGCTGAGATGGC+AGG - chr8.1:11285487-11285506 MS.gene58003:intron 55.0%
!! GGCAAGAAAGGGCGTTGGAA+AGG - chr8.1:11284143-11284162 MS.gene58003:intron 55.0%
!! GGTCCAGAGGTGTCCTTCAA+TGG + chr8.1:11286525-11286544 None:intergenic 55.0%
!! GGTGTTGCTGTTGCTGCACT+TGG - chr8.1:11285400-11285419 MS.gene58003:CDS 55.0%
!! GTGAGCATAACAAGGGCACC+AGG + chr8.1:11285976-11285995 None:intergenic 55.0%
!! GTTGCAGTTGGTCTTTGGGC+AGG - chr8.1:11285088-11285107 MS.gene58003:CDS 55.0%
!! TGGTGCCGATCTTGTTGGCA+AGG - chr8.1:11284383-11284402 MS.gene58003:intron 55.0%
ACACTCTCTGGTGTCCTCGC+TGG - chr8.1:11286030-11286049 MS.gene58003:intron 60.0%
CATCCAACACTGGCGGTGCT+TGG - chr8.1:11286238-11286257 MS.gene58003:CDS 60.0%
GCAGTTCCCTCCATCAAGCC+AGG + chr8.1:11285889-11285908 None:intergenic 60.0%
GCCCTTTCTTGCCTCAAGGG+TGG + chr8.1:11284136-11284155 None:intergenic 60.0%
GTTGCAGACTCCTGCAGGAC+TGG - chr8.1:11285265-11285284 MS.gene58003:intron 60.0%
! ATCCCAAGCACCGCCAGTGT+TGG + chr8.1:11286244-11286263 None:intergenic 60.0%
GGTAGCAGCACCAGTCCTGC+AGG + chr8.1:11285278-11285297 None:intergenic 65.0%
GGTGCCTTTGTGAGCCGAGC+TGG - chr8.1:11285709-11285728 MS.gene58003:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 11283872 11286638 11283872 ID=MS.gene58003
chr8.1 mRNA 11283872 11286638 11283872 ID=MS.gene58003.t1;Parent=MS.gene58003
chr8.1 exon 11286064 11286638 11286064 ID=MS.gene58003.t1.exon1;Parent=MS.gene58003.t1
chr8.1 CDS 11286064 11286638 11286064 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11285579 11285958 11285579 ID=MS.gene58003.t1.exon2;Parent=MS.gene58003.t1
chr8.1 CDS 11285579 11285958 11285579 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11285352 11285438 11285352 ID=MS.gene58003.t1.exon3;Parent=MS.gene58003.t1
chr8.1 CDS 11285352 11285438 11285352 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11284928 11285258 11284928 ID=MS.gene58003.t1.exon4;Parent=MS.gene58003.t1
chr8.1 CDS 11284928 11285258 11284928 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11284436 11284846 11284436 ID=MS.gene58003.t1.exon5;Parent=MS.gene58003.t1
chr8.1 CDS 11284436 11284846 11284436 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11284226 11284285 11284226 ID=MS.gene58003.t1.exon6;Parent=MS.gene58003.t1
chr8.1 CDS 11284226 11284285 11284226 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
chr8.1 exon 11283872 11284075 11283872 ID=MS.gene58003.t1.exon7;Parent=MS.gene58003.t1
chr8.1 CDS 11283872 11284075 11283872 ID=cds.MS.gene58003.t1;Parent=MS.gene58003.t1
Gene Sequence

>MS.gene58003

GATCAACATCTTTCCTTTTCACCATGTACAAGTACGTGGGAATCTTCATGGTGGCTTTTGCTATTTTGATATTCCTCTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCCATCAGCCTTGCACTTACGATGAAACTAAGATGTGTAAGCCAGCTCTTGCCACAGCCCTTTTCAGCACCATAGCATTTATCCTTGGTGGCATCACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTACGCGAATGCAAGAACCACCCTTGAGGCAAGAAAGGGCGTTGGAAAGGCTTTCATTACTGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCTAACGGTCTTTTGGTTCTTTACATTACCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTATTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTCGGAAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCCGATCTTGTTGGCAAGGTTGAAAGGAACATTCCCGAGGATGATCCAAGAAATCCAGCTGTAAGAAATTACATCCTGAAACTAGTTCCCTTTTTTCCTTTATAAACATTTTTATTTTTGATTTAAACCTTTGTTTATGTCTGTATGAATCCTTGTTTTATTCAGGTGATTGCTGACAATGTTGGTGATAACGTTGGGGATATTGCTGGTATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCTTCTATCTCTTCCTTTGGAGTGAATCATGAGTTCACTCCCATGTTGTTCCCTCTTATCATCAGTTCTGTGGGCCTCCTTGTTTGTTTGCTCACCACCTTATTTGCAACCGACTTTTTTGAGATCAAACTTGTAAAGGAAATTGAGCCTGCATTGAAAAAACAGCTTGTTATTTCAACTGCATTGATGACTGTTGGAATTGCTATTGTTAGTTGGATAGCACTCCCAGCTTCCTTCACCATCTTCAATTTTGGAGAGCAGAAGGATGTCAAGAACTGGTACGTTTCATAGCTTATTGTTAGGACCTGCTTTTGTGTCGAAATAATTGTTAATGGATTTGTTCCAGTCTATTATTAAATAATGATCTGAATGGTAATTTTAATATCTTAGTACTCACTGGATTGATTTTGGCTTGCAGGCAACTATTCTTGTGTGTTGCAGTTGGTCTTTGGGCAGGGCTTATCATTGGATTTGTTACTGAATACTATACTAGCAATGCATACAGGTAAGCAATCATGGATTCATATTTTGCATTTTCCCCATTCATCTAGTTGATTATATGCTAACTGGACTAACATTTTCTTTCTGTTTTTTGCAGTCCCGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTATGGTGTTGCTGTTGCTGCACTTGGAATGTTGAGTACCATAGCCACCGGATTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCAGGAATGAGTCACCGAATTCGTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCCGCCATTGGAAAGGTTTGGTTTTCCTCTTTCTCTCTTTAACCAGTTCAATCTGTTTTATTCATTTTCTCGATATATGATGTTACTCTGTTATAGGGGTTTGCTATTGGTTCTGCCGCCCTTGTTTCTTTGGCTCTCTTTGGTGCCTTTGTGAGCCGAGCTGGTATTACTACAGTTGATGTGCTGACTCCCAAGGTTTTCATTGGTTTGCTTGTTGGTTCCATGCTCCCTTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTCCGCAGACAATTCAACACCATTCCTGGCTTGATGGAGGGAACTGCCAAGCCTGACTATGCCACATGTGTTACAATCTCCACCGACGCATCTATCAAAGAAATGATCCCTCCTGGTGCCCTTGTTATGCTCACACCCCTTATTGTTGGGATCTTTTTCGGTGTGGAGACACTCTCTGGTGTCCTCGCTGGATCTTTGGTGTCTGGTGTACAGGTAATTAATGTTTGGTGCACTGTTATTTATTTAGTAAGCTATTCAGGGCACCTACTTCATTTTGTTGTCTGCTGCTTCTAATACAAACAATCTATTATGTATTTACTTATTAAATTAATTTTTGCACTGTGGTTGGTGTGTTCATTACAGATTGCTATCTCTGCATCCAACACTGGCGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGTAAATACTATTTTATTGAATAGTTTGAGCTGTATCAATTTGATTATGTGATGTGATATCATATGATTTTTAATGATTCTATATGATATGCTGTTGGGATGTTATTATATTATTAAAGACTCATCCATTTGGTGTTGCAACTTGAAACAGGCTGGTGCCTCAGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGACCCACACAAGGCAGCAGTTATTGGTGACACCATTGGGGACCCATTGAAGGACACCTCTGGACCATCTCTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCTCTGGTGTTTGCTCCTTTCTTTGCAACCCATGGTGGTCTCCTCTTCAAGATCTAA
Protein sequence

>MS.gene58003.t1

DQHLSFSPCTSTWESSWWLLLFUYSSSLALWKDSAQAISLALTMKLRCVSQLLPQPFSAPUHLSLVASHQLFLVSLEUKLQLTRMQEPPLRQERALERLSLLHSDQVQLWDFSLLLTVFWFFTLPSTCSRFTMVMTGVVYLRPSLVMVLVGLLWLCSEELVEVSTLRLLMLVPILLARLKGTFPRMIQEIQLULLTMLVITLGILLVWDPIYLVHMQRHLVLPLLLLLSLPLEUIMSSLPCCSLLSSVLWASLFVCSPPYLQPTFLRSNLURKLSLHUKNSLLFQLHUULLELLLLVGUHSQLPSPSSILESRRMSRTGNYSCVLQLVFGQGLSLDLLLNTILAMHTVPCKMLQTPAGLVLLPMLYLALPWDTSLLSFQFLPLQLVFLLVSVLLPCMVLLLLHLECUVPUPPDUPSMHTVQSVTMLEVLLRWQEUVTEFVREPMLLMLQETQLPPLERGLLLVLPPLFLWLSLVPLUAELVLLQLMCULPRFSLVCLLVPCSLTGFLPUQURVLEVLLURWLRKSADNSTPFLAUWRELPSLTMPHVLQSPPTHLSKKUSLLVPLLCSHPLLLGSFSVWRHSLVSSLDLWCLVYRLLSLHPTLAVLGIMPRSTLRLVPQSMQEALVQKGQTHTRQQLLVTPLGTHURTPLDHLLTSLSSUWQLSLWCLLLSLQPMVVSSSRS