Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58275.t1 | XP_003609412.1 | 77.4 | 393 | 43 | 5 | 1 | 347 | 33 | 425 | 4.70E-145 | 524.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58275.t1 | Q9LHS0 | 60.6 | 391 | 110 | 8 | 1 | 347 | 35 | 425 | 8.4e-111 | 401.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58275.t1 | G7JFD3 | 77.4 | 393 | 43 | 5 | 1 | 347 | 33 | 425 | 3.4e-145 | 524.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054585 | MS.gene58275 | 0.808957 | 2.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58275.t1 | MTR_4g115420 | 79.947 | 379 | 30 | 5 | 1 | 333 | 33 | 411 | 0.0 | 543 |
| MS.gene58275.t1 | MTR_4g127440 | 42.143 | 420 | 172 | 10 | 1 | 351 | 31 | 448 | 2.41e-90 | 282 |
| MS.gene58275.t1 | MTR_0530s0020 | 43.164 | 373 | 170 | 10 | 2 | 333 | 17 | 388 | 1.39e-86 | 271 |
| MS.gene58275.t1 | MTR_2g008170 | 28.440 | 327 | 163 | 7 | 1 | 267 | 32 | 347 | 2.98e-33 | 130 |
| MS.gene58275.t1 | MTR_3g080490 | 28.571 | 280 | 167 | 7 | 1 | 249 | 28 | 305 | 1.22e-30 | 124 |
| MS.gene58275.t1 | MTR_8g008860 | 28.428 | 299 | 162 | 7 | 1 | 249 | 32 | 328 | 1.08e-28 | 117 |
| MS.gene58275.t1 | MTR_4g114960 | 26.481 | 287 | 170 | 8 | 1 | 249 | 31 | 314 | 8.57e-26 | 108 |
| MS.gene58275.t1 | MTR_8g106040 | 29.084 | 251 | 142 | 8 | 1 | 219 | 31 | 277 | 4.63e-22 | 97.1 |
| MS.gene58275.t1 | MTR_3g106900 | 38.400 | 125 | 66 | 2 | 1 | 116 | 31 | 153 | 9.49e-21 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58275.t1 | AT5G35200 | 60.606 | 396 | 104 | 9 | 1 | 348 | 35 | 426 | 1.31e-148 | 431 |
| MS.gene58275.t1 | AT5G35200 | 60.606 | 396 | 104 | 9 | 1 | 348 | 35 | 426 | 1.31e-148 | 431 |
| MS.gene58275.t1 | AT4G25940 | 44.976 | 418 | 144 | 8 | 1 | 333 | 31 | 447 | 2.90e-100 | 309 |
| MS.gene58275.t1 | AT1G14910 | 46.973 | 413 | 152 | 13 | 1 | 347 | 31 | 442 | 5.30e-98 | 305 |
| MS.gene58275.t1 | AT2G01600 | 46.283 | 417 | 152 | 12 | 1 | 347 | 31 | 445 | 2.06e-96 | 298 |
| MS.gene58275.t1 | AT1G14910 | 45.933 | 418 | 154 | 12 | 1 | 347 | 31 | 447 | 3.50e-96 | 301 |
| MS.gene58275.t1 | AT5G57200 | 54.861 | 288 | 99 | 5 | 1 | 258 | 31 | 317 | 8.18e-96 | 297 |
| MS.gene58275.t1 | AT1G03050 | 32.881 | 295 | 149 | 8 | 1 | 249 | 33 | 324 | 2.14e-34 | 134 |
| MS.gene58275.t1 | AT4G02650 | 29.373 | 303 | 154 | 9 | 1 | 249 | 33 | 329 | 1.03e-28 | 117 |
| MS.gene58275.t1 | AT1G05020 | 26.462 | 325 | 177 | 9 | 2 | 275 | 36 | 349 | 2.02e-25 | 108 |
| MS.gene58275.t1 | AT2G25430 | 45.000 | 100 | 53 | 1 | 1 | 100 | 30 | 127 | 3.57e-22 | 98.6 |
| MS.gene58275.t1 | AT4G32285 | 42.000 | 100 | 56 | 1 | 1 | 100 | 30 | 127 | 2.85e-19 | 89.7 |
| MS.gene58275.t1 | AT4G32285 | 42.000 | 100 | 56 | 1 | 1 | 100 | 30 | 127 | 2.85e-19 | 89.7 |
Find 93 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAGAACTCATTAATTA+TGG | 0.161452 | 8.3:-11343652 | MS.gene58275:CDS |
| CAGCTTCTCTATCGAGTTAT+TGG | 0.162944 | 8.3:-11343077 | MS.gene58275:CDS |
| TCACAGAGGACCAAAGATTT+TGG | 0.194479 | 8.3:-11343139 | MS.gene58275:intron |
| TTCGCAGTTATGCATTATTT+TGG | 0.226214 | 8.3:-11343459 | MS.gene58275:intron |
| CGAATGTGTTTCTCCTTAGC+TGG | 0.277512 | 8.3:+11344675 | None:intergenic |
| CGGCAGTAATCCAAAATCTT+TGG | 0.292492 | 8.3:+11343129 | None:intergenic |
| GCTGCAGCAGCTAGCAAAAT+TGG | 0.292987 | 8.3:-11340866 | MS.gene58275:intron |
| GCACGTTCCTCCTTCACTTC+TGG | 0.306169 | 8.3:+11341878 | None:intergenic |
| TGTTCCAGCTGCTGCAGAAT+TGG | 0.309206 | 8.3:-11341644 | MS.gene58275:CDS |
| TAAACAGTTCTCATCACTAA+TGG | 0.363021 | 8.3:+11342780 | None:intergenic |
| GTATATATCAAGAGCTTTCA+AGG | 0.370309 | 8.3:+11342642 | None:intergenic |
| AATATGCCGTAATCTTGATA+TGG | 0.370763 | 8.3:-11342491 | MS.gene58275:CDS |
| TGGAACCGCTGGGTGGGAAT+TGG | 0.379150 | 8.3:-11340921 | MS.gene58275:CDS |
| TGGTATTCAGGCTGGAGGTT+TGG | 0.385048 | 8.3:-11340388 | MS.gene58275:intron |
| ATGAAGAACTCATTAATTAT+GGG | 0.394956 | 8.3:-11343651 | MS.gene58275:CDS |
| GCTGTTTCAAATCATGCAAA+TGG | 0.395050 | 8.3:-11340941 | MS.gene58275:CDS |
| TCTTCCAATTCTGCAGCAGC+TGG | 0.400965 | 8.3:+11341640 | None:intergenic |
| TTGGCTTTAGCCATCGTTCC+CGG | 0.405036 | 8.3:-11341607 | MS.gene58275:intron |
| GATTATCAAAGACACATAAC+TGG | 0.406456 | 8.3:-11344255 | MS.gene58275:CDS |
| ATACAGAAGGGTTGGGCTGC+AGG | 0.411427 | 8.3:-11342623 | MS.gene58275:intron |
| GGATTAAGACAAGCACCATT+TGG | 0.428357 | 8.3:+11343577 | None:intergenic |
| TTTCGGAACTATTGCTCCCT+GGG | 0.430388 | 8.3:+11342290 | None:intergenic |
| GGTGGTGTTTCCACTTTCAC+AGG | 0.433455 | 8.3:+11341830 | None:intergenic |
| AATTCTGCAGCAGCTGGAAC+AGG | 0.433629 | 8.3:+11341646 | None:intergenic |
| CTATCGAGTTATTGGTTGCC+AGG | 0.437344 | 8.3:-11343069 | MS.gene58275:intron |
| TCTCAGTGCATCATCATGAT+AGG | 0.437581 | 8.3:+11340346 | None:intergenic |
| ATATTGCAATTAGGTTGCTT+CGG | 0.443544 | 8.3:-11342824 | MS.gene58275:intron |
| CTTTCGGAACTATTGCTCCC+TGG | 0.444013 | 8.3:+11342289 | None:intergenic |
| CCACGTCCATATCAAGATTA+CGG | 0.452955 | 8.3:+11342485 | None:intergenic |
| ACCGTCTGAACCTGTGAAAG+TGG | 0.453685 | 8.3:-11341840 | MS.gene58275:CDS |
| GCAATAGTTCCGAAAGGATC+AGG | 0.462097 | 8.3:-11342282 | MS.gene58275:intron |
| ACAGGTTCAGACGGTGGAGG+GGG | 0.472068 | 8.3:+11341848 | None:intergenic |
| AATCATGCAAATGGAACCGC+TGG | 0.473715 | 8.3:-11340932 | MS.gene58275:CDS |
| GCAGCACTTTCATTTGAGCT+AGG | 0.489574 | 8.3:+11340884 | None:intergenic |
| TCGTACATACCTGATCCTTT+CGG | 0.489817 | 8.3:+11342273 | None:intergenic |
| AATGAGTTCTTCATGAAATG+TGG | 0.492798 | 8.3:+11343660 | None:intergenic |
| GAATGTGTTTCTCCTTAGCT+GGG | 0.493431 | 8.3:+11344676 | None:intergenic |
| CTATGTCAAAGATGCTCCCC+AGG | 0.495058 | 8.3:-11342307 | MS.gene58275:CDS |
| AAAGATGACTCGAGTCCAAA+TGG | 0.496856 | 8.3:-11343592 | MS.gene58275:CDS |
| TCACAGGTTCAGACGGTGGA+GGG | 0.500208 | 8.3:+11341846 | None:intergenic |
| TCACCGTGCTCTGAGGGAGG+TGG | 0.500344 | 8.3:-11343686 | MS.gene58275:CDS |
| ATCTTTGACATAGTCTTCCA+TGG | 0.501357 | 8.3:+11342317 | None:intergenic |
| CACAGGTTCAGACGGTGGAG+GGG | 0.502984 | 8.3:+11341847 | None:intergenic |
| ATGGCTTGCATAAACGATGA+TGG | 0.503236 | 8.3:+11342336 | None:intergenic |
| AGCGAGAGCATGGATGCAAT+AGG | 0.506646 | 8.3:+11344282 | None:intergenic |
| TGTCATTCACCGTGCTCTGA+GGG | 0.508222 | 8.3:-11343692 | MS.gene58275:CDS |
| TAGAGAAGCTGTTGTAAAGC+TGG | 0.511890 | 8.3:+11343089 | None:intergenic |
| TGGCTTGCATAAACGATGAT+GGG | 0.513219 | 8.3:+11342337 | None:intergenic |
| CCGTAATCTTGATATGGACG+TGG | 0.513763 | 8.3:-11342485 | MS.gene58275:CDS |
| TTGATATATACAGAAGGGTT+GGG | 0.514045 | 8.3:-11342630 | MS.gene58275:CDS |
| TGGCAACTGCTCTAGCAATT+CGG | 0.514773 | 8.3:+11343109 | None:intergenic |
| CGATCTCAGCTACAAGACCT+AGG | 0.519172 | 8.3:-11344315 | MS.gene58275:CDS |
| CTTGATATATACAGAAGGGT+TGG | 0.523281 | 8.3:-11342631 | MS.gene58275:CDS |
| AGAAGTCATCAAAGTTGAGC+AGG | 0.524312 | 8.3:-11342460 | MS.gene58275:intron |
| GATTCAGTTAGCACTCCAAT+TGG | 0.526089 | 8.3:-11342920 | MS.gene58275:intron |
| ATTGCATCCATGCTCTCGCT+AGG | 0.535134 | 8.3:-11344279 | MS.gene58275:CDS |
| TCATGTTGAACGCCCAGCTA+AGG | 0.541327 | 8.3:-11344688 | MS.gene58275:CDS |
| TTCACAGGTTCAGACGGTGG+AGG | 0.541839 | 8.3:+11341845 | None:intergenic |
| CAATAGGCAACGTCAGCCCT+AGG | 0.542438 | 8.3:+11344298 | None:intergenic |
| TGCAAATGGAACCGCTGGGT+GGG | 0.556842 | 8.3:-11340927 | MS.gene58275:CDS |
| ATGAGTTCTTCATGAAATGT+GGG | 0.558036 | 8.3:+11343661 | None:intergenic |
| TCCACTTTCACAGGTTCAGA+CGG | 0.567213 | 8.3:+11341839 | None:intergenic |
| ATTGGAAGAGAAGAATGCCT+TGG | 0.567227 | 8.3:-11341626 | MS.gene58275:CDS |
| GCATGATTTGAAACAGCAGA+AGG | 0.573496 | 8.3:+11340947 | None:intergenic |
| CAGAAAATTACCGGGAACGA+TGG | 0.585889 | 8.3:+11341597 | None:intergenic |
| ATAATCGCCTAGCGAGAGCA+TGG | 0.590584 | 8.3:+11344272 | None:intergenic |
| AAGCTCTTGATATATACAGA+AGG | 0.592487 | 8.3:-11342636 | MS.gene58275:CDS |
| TTATTTACAGCTGCTCCTTG+TGG | 0.595184 | 8.3:+11342949 | None:intergenic |
| ATCATCGTTTATGCAAGCCA+TGG | 0.597268 | 8.3:-11342334 | MS.gene58275:CDS |
| ACAATAAGGACCAGAAGTGA+AGG | 0.597810 | 8.3:-11341888 | MS.gene58275:intron |
| GGCTTGCATAAACGATGATG+GGG | 0.600480 | 8.3:+11342338 | None:intergenic |
| GATCCACCTCCCTCAGAGCA+CGG | 0.603781 | 8.3:+11343683 | None:intergenic |
| ATGCAAATGGAACCGCTGGG+TGG | 0.604316 | 8.3:-11340928 | MS.gene58275:CDS |
| CGTAATCTTGATATGGACGT+GGG | 0.604817 | 8.3:-11342484 | MS.gene58275:CDS |
| TTGTCATTCACCGTGCTCTG+AGG | 0.605568 | 8.3:-11343693 | MS.gene58275:CDS |
| GCTAAGGAGAAACACATTCG+AGG | 0.614196 | 8.3:-11344672 | MS.gene58275:intron |
| ACTTTCACAGGTTCAGACGG+TGG | 0.618055 | 8.3:+11341842 | None:intergenic |
| GATCTCAGCTACAAGACCTA+GGG | 0.619658 | 8.3:-11344314 | MS.gene58275:CDS |
| TTTCGTATGCTGCAGCCACA+AGG | 0.624793 | 8.3:-11342964 | MS.gene58275:intron |
| CATTCACCGTGCTCTGAGGG+AGG | 0.628270 | 8.3:-11343689 | MS.gene58275:CDS |
| AGCTCTTGATATATACAGAA+GGG | 0.631545 | 8.3:-11342635 | MS.gene58275:CDS |
| GGGAACGATGGCTAAAGCCA+AGG | 0.647252 | 8.3:+11341609 | None:intergenic |
| ATAAGGACCAGAAGTGAAGG+AGG | 0.661380 | 8.3:-11341885 | MS.gene58275:intron |
| CAGGGAGCAATAGTTCCGAA+AGG | 0.665161 | 8.3:-11342288 | MS.gene58275:CDS |
| TAGAAGTCATATGCTCAACA+TGG | 0.670556 | 8.3:-11343623 | MS.gene58275:CDS |
| TTCGGAACTATTGCTCCCTG+GGG | 0.671911 | 8.3:+11342291 | None:intergenic |
| TATGTCAAAGATGCTCCCCA+GGG | 0.677197 | 8.3:-11342306 | MS.gene58275:CDS |
| ATCATGCAAATGGAACCGCT+GGG | 0.691533 | 8.3:-11340931 | MS.gene58275:CDS |
| TGTGTTGAAGTATGACATTG+AGG | 0.694540 | 8.3:-11343414 | MS.gene58275:CDS |
| ATTATCAAAGACACATAACT+GGG | 0.698534 | 8.3:-11344254 | MS.gene58275:CDS |
| GTAATCTTGATATGGACGTG+GGG | 0.711368 | 8.3:-11342483 | MS.gene58275:CDS |
| GCTTGCATAAACGATGATGG+GGG | 0.721996 | 8.3:+11342339 | None:intergenic |
| AAGAGCCAATTCCCACCCAG+CGG | 0.743374 | 8.3:+11340916 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAACAATAGTAAT+TGG | - | chr8.3:11343551-11343570 | MS.gene58275:intron | 10.0% |
| !! | ATAAAATAATTGAAAAGAAT+TGG | + | chr8.3:11342665-11342684 | None:intergenic | 10.0% |
| !! | TTTAAAAAATATTTACTAAC+TGG | - | chr8.3:11343079-11343098 | MS.gene58275:CDS | 10.0% |
| !!! | ATTTTATTTTAATCTAAAAG+AGG | - | chr8.3:11343109-11343128 | MS.gene58275:CDS | 10.0% |
| !!! | TCTTTTAGATTAAAATAAAA+TGG | + | chr8.3:11343110-11343129 | None:intergenic | 10.0% |
| !!! | TTTTTATTCCATATAAAAAA+AGG | + | chr8.3:11340869-11340888 | None:intergenic | 10.0% |
| !! | AAACAAACAAAAATTAAGTA+TGG | + | chr8.3:11342190-11342209 | None:intergenic | 15.0% |
| !!! | ACTAATACTTTTAATATTAG+AGG | - | chr8.3:11343924-11343943 | MS.gene58275:intron | 15.0% |
| !!! | AGTAATAATAAATTTGCTAA+TGG | + | chr8.3:11343845-11343864 | None:intergenic | 15.0% |
| !! | AAAAACACAAATCATAAAAG+AGG | + | chr8.3:11340436-11340455 | None:intergenic | 20.0% |
| !! | AAAACACAAATCATAAAAGA+GGG | + | chr8.3:11340435-11340454 | None:intergenic | 20.0% |
| !! | AATATAAGGTATATTCAGAA+AGG | + | chr8.3:11342229-11342248 | None:intergenic | 20.0% |
| !! | ACATGCATTTATTAATGAAT+AGG | - | chr8.3:11343796-11343815 | MS.gene58275:intron | 20.0% |
| !! | ACTTATAAAAAGATACCAAT+GGG | + | chr8.3:11344249-11344268 | None:intergenic | 20.0% |
| !! | AGGGATATATTATTTGAAAA+AGG | - | chr8.3:11344419-11344438 | MS.gene58275:intron | 20.0% |
| !! | ATATACCTTATATTGCAATT+AGG | - | chr8.3:11342235-11342254 | MS.gene58275:intron | 20.0% |
| !! | ATATTAAACAACTGCTAATT+TGG | - | chr8.3:11343886-11343905 | MS.gene58275:intron | 20.0% |
| !! | ATATTTATAGATTGTATACG+AGG | - | chr8.3:11340660-11340679 | MS.gene58275:intron | 20.0% |
| !! | ATGAAGAACTCATTAATTAT+GGG | - | chr8.3:11341417-11341436 | MS.gene58275:intron | 20.0% |
| !! | ATGATTAATGAGAGAAAATT+GGG | + | chr8.3:11343726-11343745 | None:intergenic | 20.0% |
| !! | ATTGAATACATTTATATCGA+AGG | + | chr8.3:11344357-11344376 | None:intergenic | 20.0% |
| !! | ATTTATAACAAGATCAATGA+TGG | + | chr8.3:11341517-11341536 | None:intergenic | 20.0% |
| !! | CATTAAGTTTATAATCTTAC+AGG | + | chr8.3:11341688-11341707 | None:intergenic | 20.0% |
| !! | GTCATTAAATTCAAAAAAGT+TGG | + | chr8.3:11342037-11342056 | None:intergenic | 20.0% |
| !! | TATTTATAGATTGTATACGA+GGG | - | chr8.3:11340661-11340680 | MS.gene58275:intron | 20.0% |
| !! | TGAAATTAAATATCATGTCT+TGG | - | chr8.3:11344050-11344069 | MS.gene58275:intron | 20.0% |
| !! | TTGAATACATTTATATCGAA+GGG | + | chr8.3:11344356-11344375 | None:intergenic | 20.0% |
| !! | TTGAATGATCCTTATAAATA+GGG | - | chr8.3:11344499-11344518 | MS.gene58275:intron | 20.0% |
| !! | TTTATAACAAGATCAATGAT+GGG | + | chr8.3:11341516-11341535 | None:intergenic | 20.0% |
| !!! | CTTTTATGATTTGTGTTTTT+TGG | - | chr8.3:11340436-11340455 | MS.gene58275:intron | 20.0% |
| !!! | GATCTTATCCTTTTTTTATA+TGG | - | chr8.3:11340858-11340877 | MS.gene58275:intron | 20.0% |
| !!! | TAATTACTGTGTTTTTCTTT+TGG | - | chr8.3:11343288-11343307 | MS.gene58275:intron | 20.0% |
| ! | AAGTCATTTAGTGAATACAT+TGG | + | chr8.3:11340896-11340915 | None:intergenic | 25.0% |
| ! | AATGTATTCACTAAATGACT+TGG | - | chr8.3:11340895-11340914 | MS.gene58275:CDS | 25.0% |
| ! | ACACGGTAATATTAGTATTT+GGG | - | chr8.3:11342903-11342922 | MS.gene58275:intron | 25.0% |
| ! | ACCTTAAGTCAAATAAAAGT+GGG | - | chr8.3:11341050-11341069 | MS.gene58275:intron | 25.0% |
| ! | ACGTGAATTTAATAATAGAG+AGG | + | chr8.3:11342492-11342511 | None:intergenic | 25.0% |
| ! | ATCTAATAAAACAAACCTAG+TGG | - | chr8.3:11342877-11342896 | MS.gene58275:intron | 25.0% |
| ! | ATTATCAAAGACACATAACT+GGG | - | chr8.3:11340814-11340833 | MS.gene58275:intron | 25.0% |
| ! | CAATAGTCTCATATATACAT+CGG | + | chr8.3:11342368-11342387 | None:intergenic | 25.0% |
| ! | CATGAAGAACTCATTAATTA+TGG | - | chr8.3:11341416-11341435 | MS.gene58275:intron | 25.0% |
| ! | CATGATTAATGAGAGAAAAT+TGG | + | chr8.3:11343727-11343746 | None:intergenic | 25.0% |
| ! | CGTGAATTTAATAATAGAGA+GGG | + | chr8.3:11342491-11342510 | None:intergenic | 25.0% |
| ! | CTATTTATAAGGATCATTCA+AGG | + | chr8.3:11344500-11344519 | None:intergenic | 25.0% |
| ! | CTTATAAAAAGATACCAATG+GGG | + | chr8.3:11344248-11344267 | None:intergenic | 25.0% |
| ! | CTTGAATGATCCTTATAAAT+AGG | - | chr8.3:11344498-11344517 | MS.gene58275:intron | 25.0% |
| ! | GACTTATAAAAAGATACCAA+TGG | + | chr8.3:11344250-11344269 | None:intergenic | 25.0% |
| ! | GGAAGAAATTAATGATGTAT+TGG | + | chr8.3:11343705-11343724 | None:intergenic | 25.0% |
| ! | GGTAATTAATACCAAAAACA+GGG | + | chr8.3:11343316-11343335 | None:intergenic | 25.0% |
| ! | TACACGGTAATATTAGTATT+TGG | - | chr8.3:11342902-11342921 | MS.gene58275:intron | 25.0% |
| ! | TACCTTAAGTCAAATAAAAG+TGG | - | chr8.3:11341049-11341068 | MS.gene58275:intron | 25.0% |
| ! | TACTAGTATGATATTACCAT+CGG | + | chr8.3:11341823-11341842 | None:intergenic | 25.0% |
| ! | TAGTCAATAACCAAATAGAA+TGG | + | chr8.3:11341320-11341339 | None:intergenic | 25.0% |
| ! | TATCCTGAAATTATGTTCTA+AGG | - | chr8.3:11342511-11342530 | MS.gene58275:CDS | 25.0% |
| ! | TATGTACTGCAATGTTTATA+TGG | - | chr8.3:11341208-11341227 | MS.gene58275:intron | 25.0% |
| ! | TGACAAAGTAACATTTAGTT+TGG | + | chr8.3:11343680-11343699 | None:intergenic | 25.0% |
| ! | TGTTTCTTGGTATTTAAACA+AGG | + | chr8.3:11341188-11341207 | None:intergenic | 25.0% |
| ! | TTATAAAAAGATACCAATGG+GGG | + | chr8.3:11344247-11344266 | None:intergenic | 25.0% |
| ! | TTATAACAAGATCAATGATG+GGG | + | chr8.3:11341515-11341534 | None:intergenic | 25.0% |
| ! | TTATTAGCACATATGATTTG+TGG | - | chr8.3:11344552-11344571 | MS.gene58275:intron | 25.0% |
| ! | TTTGGCTATTGAATACAATA+AGG | - | chr8.3:11343166-11343185 | MS.gene58275:intron | 25.0% |
| !! | ACTGTTTAATATGGTTGATA+AGG | - | chr8.3:11342303-11342322 | MS.gene58275:CDS | 25.0% |
| !! | TTCTATTTTCTGCATTTTGT+TGG | - | chr8.3:11343983-11344002 | MS.gene58275:intron | 25.0% |
| !!! | AATAAATTTGCTAATGGACA+TGG | + | chr8.3:11343839-11343858 | None:intergenic | 25.0% |
| !!! | TTCTTTGGAGTTAATCTTAA+CGG | - | chr8.3:11340483-11340502 | MS.gene58275:intron | 25.0% |
| AAACAACTGCTAATTTGGAA+TGG | - | chr8.3:11343891-11343910 | MS.gene58275:intron | 30.0% | |
| AACAATAGTAATTGGATCGT+TGG | - | chr8.3:11343559-11343578 | MS.gene58275:intron | 30.0% | |
| AAGCTCTTGATATATACAGA+AGG | - | chr8.3:11342432-11342451 | MS.gene58275:intron | 30.0% | |
| AATATGCCGTAATCTTGATA+TGG | - | chr8.3:11342577-11342596 | MS.gene58275:intron | 30.0% | |
| AATGAGTTCTTCATGAAATG+TGG | + | chr8.3:11341411-11341430 | None:intergenic | 30.0% | |
| ACAATAGTAATTGGATCGTT+GGG | - | chr8.3:11343560-11343579 | MS.gene58275:intron | 30.0% | |
| ACAGTAATTACCAAAAGTTC+AGG | + | chr8.3:11343278-11343297 | None:intergenic | 30.0% | |
| ACGAGAACACATAAATACTT+GGG | + | chr8.3:11340715-11340734 | None:intergenic | 30.0% | |
| AGCAACCTAATTGCAATATA+AGG | + | chr8.3:11342243-11342262 | None:intergenic | 30.0% | |
| AGCTCTTGATATATACAGAA+GGG | - | chr8.3:11342433-11342452 | MS.gene58275:intron | 30.0% | |
| AGTTATATGCAAAGCAACAT+CGG | + | chr8.3:11343337-11343356 | None:intergenic | 30.0% | |
| ATACGTATGTGAAATTGCAA+GGG | + | chr8.3:11344272-11344291 | None:intergenic | 30.0% | |
| ATGAGTTCTTCATGAAATGT+GGG | + | chr8.3:11341410-11341429 | None:intergenic | 30.0% | |
| ATGATCCTTATAAATAGGGA+TGG | - | chr8.3:11344503-11344522 | MS.gene58275:intron | 30.0% | |
| ATTATGTGAATGTTATCCGA+TGG | - | chr8.3:11341804-11341823 | MS.gene58275:intron | 30.0% | |
| ATTGCAGTACATATGTTTCT+TGG | + | chr8.3:11341201-11341220 | None:intergenic | 30.0% | |
| CAAAGAAGGAATCAAACATT+TGG | + | chr8.3:11340470-11340489 | None:intergenic | 30.0% | |
| CAAATGTTTGATTCCTTCTT+TGG | - | chr8.3:11340468-11340487 | MS.gene58275:intron | 30.0% | |
| CACGGTAATATTAGTATTTG+GGG | - | chr8.3:11342904-11342923 | MS.gene58275:intron | 30.0% | |
| CAGAAAATAGAAAATGATGC+TGG | + | chr8.3:11343975-11343994 | None:intergenic | 30.0% | |
| CAGTAATTACCAAAAGTTCA+GGG | + | chr8.3:11343277-11343296 | None:intergenic | 30.0% | |
| CATACAATCTCTTGTAATGT+TGG | - | chr8.3:11344081-11344100 | MS.gene58275:intron | 30.0% | |
| CGCAAAAACGACTATTAATT+TGG | + | chr8.3:11343644-11343663 | None:intergenic | 30.0% | |
| CGGTAATTAATACCAAAAAC+AGG | + | chr8.3:11343317-11343336 | None:intergenic | 30.0% | |
| GATGGTAATATCATACTAGT+AGG | - | chr8.3:11341822-11341841 | MS.gene58275:intron | 30.0% | |
| GATTATCAAAGACACATAAC+TGG | - | chr8.3:11340813-11340832 | MS.gene58275:intron | 30.0% | |
| GTATATATCAAGAGCTTTCA+AGG | + | chr8.3:11342429-11342448 | None:intergenic | 30.0% | |
| GTGATGAGAACTGTTTAATA+TGG | - | chr8.3:11342294-11342313 | MS.gene58275:CDS | 30.0% | |
| GTTAAGATTAACTCCAAAGA+AGG | + | chr8.3:11340484-11340503 | None:intergenic | 30.0% | |
| TAAACAGTTCTCATCACTAA+TGG | + | chr8.3:11342291-11342310 | None:intergenic | 30.0% | |
| TAAATAAGTGACCTACCAAT+TGG | + | chr8.3:11342166-11342185 | None:intergenic | 30.0% | |
| TAGATGCATACACAAAATGA+GGG | + | chr8.3:11344590-11344609 | None:intergenic | 30.0% | |
| TATACGTATGTGAAATTGCA+AGG | + | chr8.3:11344273-11344292 | None:intergenic | 30.0% | |
| TTAGATGCATACACAAAATG+AGG | + | chr8.3:11344591-11344610 | None:intergenic | 30.0% | |
| TTAGTACAATATTAAGCTGC+TGG | + | chr8.3:11342074-11342093 | None:intergenic | 30.0% | |
| TTCTAGTAGGCAAATCAAAA+TGG | + | chr8.3:11343392-11343411 | None:intergenic | 30.0% | |
| TTGATATATACAGAAGGGTT+GGG | - | chr8.3:11342438-11342457 | MS.gene58275:intron | 30.0% | |
| TTGCATGTGTGATGAATAAA+CGG | + | chr8.3:11341148-11341167 | None:intergenic | 30.0% | |
| TTTGAATGTGCAGAATTAAC+TGG | + | chr8.3:11343532-11343551 | None:intergenic | 30.0% | |
| ! | ATATTGCAATTAGGTTGCTT+CGG | - | chr8.3:11342244-11342263 | MS.gene58275:intron | 30.0% |
| ! | TAATAAGTGAGATGACCTTT+TGG | - | chr8.3:11344660-11344679 | MS.gene58275:intron | 30.0% |
| ! | TCAATAGCCAAAACTTCTTT+TGG | + | chr8.3:11343158-11343177 | None:intergenic | 30.0% |
| ! | TCTATTTGGTTATTGACTAG+TGG | - | chr8.3:11341321-11341340 | MS.gene58275:intron | 30.0% |
| ! | TTCGCAGTTATGCATTATTT+TGG | - | chr8.3:11341609-11341628 | MS.gene58275:CDS | 30.0% |
| !! | ACAGTTTAGTAGTGTTGATT+AGG | - | chr8.3:11344399-11344418 | MS.gene58275:intron | 30.0% |
| !! | ACCCACTTTTATTTGACTTA+AGG | + | chr8.3:11341054-11341073 | None:intergenic | 30.0% |
| !! | ATGTTCTAAGGTGCTTTATT+TGG | - | chr8.3:11342523-11342542 | MS.gene58275:intron | 30.0% |
| !! | CAGTTTAGTAGTGTTGATTA+GGG | - | chr8.3:11344400-11344419 | MS.gene58275:intron | 30.0% |
| !! | TCTTTGGAGTTAATCTTAAC+GGG | - | chr8.3:11340484-11340503 | MS.gene58275:intron | 30.0% |
| !! | TGTTCTAAGGTGCTTTATTT+GGG | - | chr8.3:11342524-11342543 | MS.gene58275:intron | 30.0% |
| !! | TGTTTTTGTGCCATTCTATT+TGG | - | chr8.3:11341307-11341326 | MS.gene58275:intron | 30.0% |
| !! | TTGATTTGCCTACTAGAATA+TGG | - | chr8.3:11343394-11343413 | MS.gene58275:intron | 30.0% |
| !!! | TATGCATTATTTTGGAGGAA+AGG | - | chr8.3:11341617-11341636 | MS.gene58275:CDS | 30.0% |
| !!! | TGACTAGTGGTTTTATCTAT+AGG | - | chr8.3:11341334-11341353 | MS.gene58275:intron | 30.0% |
| ACAAACAAATCGATGACGTA+GGG | + | chr8.3:11340526-11340545 | None:intergenic | 35.0% | |
| ACAAGAGATTGTATGAGTTG+AGG | + | chr8.3:11344076-11344095 | None:intergenic | 35.0% | |
| ACCTTGGCAAGAAAGAATAT+AGG | + | chr8.3:11340958-11340977 | None:intergenic | 35.0% | |
| AGGATCATCCATATTCTAGT+AGG | + | chr8.3:11343405-11343424 | None:intergenic | 35.0% | |
| ATATCAAGTCCTGAAACAAC+TGG | + | chr8.3:11342993-11343012 | None:intergenic | 35.0% | |
| ATATTACCGTGTAATCCACT+AGG | + | chr8.3:11342895-11342914 | None:intergenic | 35.0% | |
| ATCCTTATAAATAGGGATGG+AGG | - | chr8.3:11344506-11344525 | MS.gene58275:intron | 35.0% | |
| ATCTTTGACATAGTCTTCCA+TGG | + | chr8.3:11342754-11342773 | None:intergenic | 35.0% | |
| ATGCAATGTTTCATCAACCT+TGG | + | chr8.3:11340974-11340993 | None:intergenic | 35.0% | |
| ATTGTATACGAGGGAATTGT+TGG | - | chr8.3:11340670-11340689 | MS.gene58275:intron | 35.0% | |
| CAAAGGTTACAGAACAAAAC+AGG | + | chr8.3:11342830-11342849 | None:intergenic | 35.0% | |
| CAACACTACTAAACTGTCTT+GGG | + | chr8.3:11344396-11344415 | None:intergenic | 35.0% | |
| CCATGCATGTTCTTTGAATA+AGG | - | chr8.3:11341883-11341902 | MS.gene58275:CDS | 35.0% | |
| CCTTATTCAAAGAACATGCA+TGG | + | chr8.3:11341886-11341905 | None:intergenic | 35.0% | |
| CTTCATACATAAAGCCACAA+AGG | + | chr8.3:11342847-11342866 | None:intergenic | 35.0% | |
| CTTGATATATACAGAAGGGT+TGG | - | chr8.3:11342437-11342456 | MS.gene58275:intron | 35.0% | |
| GACGAGAACACATAAATACT+TGG | + | chr8.3:11340716-11340735 | None:intergenic | 35.0% | |
| GCACCTTAGAACATAATTTC+AGG | + | chr8.3:11342517-11342536 | None:intergenic | 35.0% | |
| GGTAATATTAGTATTTGGGG+AGG | - | chr8.3:11342907-11342926 | MS.gene58275:intron | 35.0% | |
| GGTGAATTACATAATCGCAA+AGG | + | chr8.3:11341267-11341286 | None:intergenic | 35.0% | |
| TAATTACCAAAAGTTCAGGG+TGG | + | chr8.3:11343274-11343293 | None:intergenic | 35.0% | |
| TAGAAGTCATATGCTCAACA+TGG | - | chr8.3:11341445-11341464 | MS.gene58275:intron | 35.0% | |
| TAGTCTCATATATACATCGG+AGG | + | chr8.3:11342365-11342384 | None:intergenic | 35.0% | |
| TCAACACTACTAAACTGTCT+TGG | + | chr8.3:11344397-11344416 | None:intergenic | 35.0% | |
| TCCTTATAAATAGGGATGGA+GGG | - | chr8.3:11344507-11344526 | MS.gene58275:intron | 35.0% | |
| TGTCTTAACGCAAATGCAAA+AGG | + | chr8.3:11343498-11343517 | None:intergenic | 35.0% | |
| TGTGTTGAAGTATGACATTG+AGG | - | chr8.3:11341654-11341673 | MS.gene58275:CDS | 35.0% | |
| ! | CGACTATTAATTTGGAACGA+AGG | + | chr8.3:11343636-11343655 | None:intergenic | 35.0% |
| ! | GCTGTTTCAAATCATGCAAA+TGG | - | chr8.3:11344127-11344146 | MS.gene58275:intron | 35.0% |
| !! | AACAAACCTAGTGGATTACA+CGG | - | chr8.3:11342886-11342905 | MS.gene58275:intron | 35.0% |
| !! | AGCAGCAATTTTGTTGTCAA+CGG | + | chr8.3:11343135-11343154 | None:intergenic | 35.0% |
| !! | GAAAGAGTGCTTATATTCAG+AGG | - | chr8.3:11344464-11344483 | MS.gene58275:intron | 35.0% |
| !! | GTTTTGTTCTGTAACCTTTG+TGG | - | chr8.3:11342830-11342849 | MS.gene58275:intron | 35.0% |
| !!! | GACAGTTTTTTGAGATGCAA+CGG | - | chr8.3:11342397-11342416 | MS.gene58275:intron | 35.0% |
| !!! | GCAGTTATGCATTATTTTGG+AGG | - | chr8.3:11341612-11341631 | MS.gene58275:CDS | 35.0% |
| AAAGATGACTCGAGTCCAAA+TGG | - | chr8.3:11341476-11341495 | MS.gene58275:intron | 40.0% | |
| ACAATAAGGACCAGAAGTGA+AGG | - | chr8.3:11343180-11343199 | MS.gene58275:intron | 40.0% | |
| ACATGGACAACAACTATGAG+CGG | + | chr8.3:11342950-11342969 | None:intergenic | 40.0% | |
| AGAAGTCATCAAAGTTGAGC+AGG | - | chr8.3:11342608-11342627 | MS.gene58275:intron | 40.0% | |
| AGCAGCTAGCAAAATTGGTA+TGG | - | chr8.3:11344207-11344226 | MS.gene58275:intron | 40.0% | |
| AGCATGGGATTATTCTGCAT+GGG | - | chr8.3:11341586-11341605 | MS.gene58275:intron | 40.0% | |
| AGGGAATTGTTGGATACGTT+AGG | - | chr8.3:11340680-11340699 | MS.gene58275:intron | 40.0% | |
| ATCAAGTATACGTGCAAGCA+AGG | + | chr8.3:11344632-11344651 | None:intergenic | 40.0% | |
| ATCATCGTTTATGCAAGCCA+TGG | - | chr8.3:11342734-11342753 | MS.gene58275:intron | 40.0% | |
| ATTCACAAACACATGCTCAG+TGG | + | chr8.3:11341288-11341307 | None:intergenic | 40.0% | |
| ATTGGAAGAGAAGAATGCCT+TGG | - | chr8.3:11343442-11343461 | MS.gene58275:CDS | 40.0% | |
| CAAAAGGCCAGAAAATTACC+GGG | + | chr8.3:11343482-11343501 | None:intergenic | 40.0% | |
| CAATTGTGACTTTGTCACAG+AGG | - | chr8.3:11341915-11341934 | MS.gene58275:intron | 40.0% | |
| CAGCTTCTCTATCGAGTTAT+TGG | - | chr8.3:11341991-11342010 | MS.gene58275:intron | 40.0% | |
| CATAATAAACGCGATGTCCT+TGG | + | chr8.3:11340562-11340581 | None:intergenic | 40.0% | |
| CATGAGTTATGCCAATGTTG+TGG | - | chr8.3:11341009-11341028 | MS.gene58275:intron | 40.0% | |
| CCACGTCCATATCAAGATTA+CGG | + | chr8.3:11342586-11342605 | None:intergenic | 40.0% | |
| CGGCAGTAATCCAAAATCTT+TGG | + | chr8.3:11341942-11341961 | None:intergenic | 40.0% | |
| CGTAATCTTGATATGGACGT+GGG | - | chr8.3:11342584-11342603 | MS.gene58275:intron | 40.0% | |
| CTCTGTGACAAAGTCACAAT+TGG | + | chr8.3:11341917-11341936 | None:intergenic | 40.0% | |
| GAATGTGTTTCTCCTTAGCT+GGG | + | chr8.3:11340395-11340414 | None:intergenic | 40.0% | |
| GACAAACAAATCGATGACGT+AGG | + | chr8.3:11340527-11340546 | None:intergenic | 40.0% | |
| GATTCAGTTAGCACTCCAAT+TGG | - | chr8.3:11342148-11342167 | MS.gene58275:intron | 40.0% | |
| GCAAAAGGCCAGAAAATTAC+CGG | + | chr8.3:11343483-11343502 | None:intergenic | 40.0% | |
| GCCTATATTCTTTCTTGCCA+AGG | - | chr8.3:11340954-11340973 | MS.gene58275:CDS | 40.0% | |
| GGATTAAGACAAGCACCATT+TGG | + | chr8.3:11341494-11341513 | None:intergenic | 40.0% | |
| GGGAATTGTTGGATACGTTA+GGG | - | chr8.3:11340681-11340700 | MS.gene58275:intron | 40.0% | |
| GGTGAAAGTGAAACAGTACA+TGG | + | chr8.3:11342967-11342986 | None:intergenic | 40.0% | |
| GTAATCTTGATATGGACGTG+GGG | - | chr8.3:11342585-11342604 | MS.gene58275:intron | 40.0% | |
| TAGAGAAGCTGTTGTAAAGC+TGG | + | chr8.3:11341982-11342001 | None:intergenic | 40.0% | |
| TCAAGTATACGTGCAAGCAA+GGG | + | chr8.3:11344631-11344650 | None:intergenic | 40.0% | |
| TCCCTCCATCCCTATTTATA+AGG | + | chr8.3:11344511-11344530 | None:intergenic | 40.0% | |
| TCGTACATACCTGATCCTTT+CGG | + | chr8.3:11342798-11342817 | None:intergenic | 40.0% | |
| TGATGATCAAGCCACAACAT+TGG | + | chr8.3:11341023-11341042 | None:intergenic | 40.0% | |
| TTATTTACAGCTGCTCCTTG+TGG | + | chr8.3:11342122-11342141 | None:intergenic | 40.0% | |
| ! | ATGGCTTGCATAAACGATGA+TGG | + | chr8.3:11342735-11342754 | None:intergenic | 40.0% |
| ! | GAGATGACCTTTTGGTATTC+AGG | - | chr8.3:11344668-11344687 | MS.gene58275:intron | 40.0% |
| ! | GCATGATTTGAAACAGCAGA+AGG | + | chr8.3:11344124-11344143 | None:intergenic | 40.0% |
| ! | TAATTTGGAATGGAGCGAGT+AGG | - | chr8.3:11343901-11343920 | MS.gene58275:intron | 40.0% |
| ! | TCACAGAGGACCAAAGATTT+TGG | - | chr8.3:11341929-11341948 | MS.gene58275:intron | 40.0% |
| ! | TCGTGTTTTGTGTTCAGCAT+GGG | - | chr8.3:11341571-11341590 | MS.gene58275:intron | 40.0% |
| ! | TGCTGCTCCAAAAGAAGTTT+TGG | - | chr8.3:11343148-11343167 | MS.gene58275:intron | 40.0% |
| ! | TGGCTTGCATAAACGATGAT+GGG | + | chr8.3:11342734-11342753 | None:intergenic | 40.0% |
| ! | TTCGTGTTTTGTGTTCAGCA+TGG | - | chr8.3:11341570-11341589 | MS.gene58275:intron | 40.0% |
| ! | TTGTCACATGTTCTGAACCA+AGG | - | chr8.3:11340542-11340561 | MS.gene58275:intron | 40.0% |
| !!! | CATTATTTTGGAGGAAAGGC+TGG | - | chr8.3:11341621-11341640 | MS.gene58275:CDS | 40.0% |
| !!! | TTCTTTTGGTGCCCTGTTTT+TGG | - | chr8.3:11343302-11343321 | MS.gene58275:intron | 40.0% |
| AAGTCCTGAAACAACTGGAG+AGG | + | chr8.3:11342988-11343007 | None:intergenic | 45.0% | |
| AATCATGCAAATGGAACCGC+TGG | - | chr8.3:11344136-11344155 | MS.gene58275:intron | 45.0% | |
| AGTTGGATCAAAAGCTCACC+TGG | + | chr8.3:11342020-11342039 | None:intergenic | 45.0% | |
| ATAAGGACCAGAAGTGAAGG+AGG | - | chr8.3:11343183-11343202 | MS.gene58275:intron | 45.0% | |
| ATCATGCAAATGGAACCGCT+GGG | - | chr8.3:11344137-11344156 | MS.gene58275:intron | 45.0% | |
| CAGAAAATTACCGGGAACGA+TGG | + | chr8.3:11343474-11343493 | None:intergenic | 45.0% | |
| CAGCATGGGATTATTCTGCA+TGG | - | chr8.3:11341585-11341604 | MS.gene58275:intron | 45.0% | |
| CAGTTAGCACTCCAATTGGT+AGG | - | chr8.3:11342152-11342171 | MS.gene58275:intron | 45.0% | |
| CCGTAATCTTGATATGGACG+TGG | - | chr8.3:11342583-11342602 | MS.gene58275:intron | 45.0% | |
| CGAATGTGTTTCTCCTTAGC+TGG | + | chr8.3:11340396-11340415 | None:intergenic | 45.0% | |
| GATCTCAGCTACAAGACCTA+GGG | - | chr8.3:11340754-11340773 | MS.gene58275:intron | 45.0% | |
| GCAAGCAAGGGTAATGATTG+TGG | + | chr8.3:11344619-11344638 | None:intergenic | 45.0% | |
| GCAATAGTTCCGAAAGGATC+AGG | - | chr8.3:11342786-11342805 | MS.gene58275:CDS | 45.0% | |
| GCAGCACTTTCATTTGAGCT+AGG | + | chr8.3:11344187-11344206 | None:intergenic | 45.0% | |
| GCTAAGGAGAAACACATTCG+AGG | - | chr8.3:11340396-11340415 | MS.gene58275:intron | 45.0% | |
| GGCTTGCATAAACGATGATG+GGG | + | chr8.3:11342733-11342752 | None:intergenic | 45.0% | |
| GTCATCAAAGTTGAGCAGGT+TGG | - | chr8.3:11342612-11342631 | MS.gene58275:intron | 45.0% | |
| TATGTCAAAGATGCTCCCCA+GGG | - | chr8.3:11342762-11342781 | MS.gene58275:intron | 45.0% | |
| TCCACTTTCACAGGTTCAGA+CGG | + | chr8.3:11343232-11343251 | None:intergenic | 45.0% | |
| TGGCAACTGCTCTAGCAATT+CGG | + | chr8.3:11341962-11341981 | None:intergenic | 45.0% | |
| TTACCAAAAGTTCAGGGTGG+TGG | + | chr8.3:11343271-11343290 | None:intergenic | 45.0% | |
| TTCTTCTTCAATGCCCCCAT+TGG | - | chr8.3:11344231-11344250 | MS.gene58275:intron | 45.0% | |
| TTTCGGAACTATTGCTCCCT+GGG | + | chr8.3:11342781-11342800 | None:intergenic | 45.0% | |
| ! | CATCGTTCCCGGTAATTTTC+TGG | - | chr8.3:11343472-11343491 | MS.gene58275:intron | 45.0% |
| ! | CTATCGAGTTATTGGTTGCC+AGG | - | chr8.3:11341999-11342018 | MS.gene58275:intron | 45.0% |
| ! | GCTTGCATAAACGATGATGG+GGG | + | chr8.3:11342732-11342751 | None:intergenic | 45.0% |
| ! | TGACCTTTTGGTATTCAGGC+TGG | - | chr8.3:11344672-11344691 | MS.gene58275:intron | 45.0% |
| ! | TTCACCTCTCCAGTTGTTTC+AGG | - | chr8.3:11342981-11343000 | MS.gene58275:intron | 45.0% |
| !! | AAGGTGCTTTATTTGGGTCC+AGG | - | chr8.3:11342530-11342549 | MS.gene58275:intron | 45.0% |
| AATTCTGCAGCAGCTGGAAC+AGG | + | chr8.3:11343425-11343444 | None:intergenic | 50.0% | |
| ACCGTCTGAACCTGTGAAAG+TGG | - | chr8.3:11343228-11343247 | MS.gene58275:intron | 50.0% | |
| ACTTTCACAGGTTCAGACGG+TGG | + | chr8.3:11343229-11343248 | None:intergenic | 50.0% | |
| ATAATCGCCTAGCGAGAGCA+TGG | + | chr8.3:11340799-11340818 | None:intergenic | 50.0% | |
| ATTGCATCCATGCTCTCGCT+AGG | - | chr8.3:11340789-11340808 | MS.gene58275:intron | 50.0% | |
| CAGGGAGCAATAGTTCCGAA+AGG | - | chr8.3:11342780-11342799 | MS.gene58275:intron | 50.0% | |
| CCTCCAGCCTGAATACCAAA+AGG | + | chr8.3:11344678-11344697 | None:intergenic | 50.0% | |
| CGATCTCAGCTACAAGACCT+AGG | - | chr8.3:11340753-11340772 | MS.gene58275:intron | 50.0% | |
| CTATGTCAAAGATGCTCCCC+AGG | - | chr8.3:11342761-11342780 | MS.gene58275:intron | 50.0% | |
| CTTTCGGAACTATTGCTCCC+TGG | + | chr8.3:11342782-11342801 | None:intergenic | 50.0% | |
| GCTGCAGCAGCTAGCAAAAT+TGG | - | chr8.3:11344202-11344221 | MS.gene58275:intron | 50.0% | |
| GGTGGTGTTTCCACTTTCAC+AGG | + | chr8.3:11343241-11343260 | None:intergenic | 50.0% | |
| TCATGTTGAACGCCCAGCTA+AGG | - | chr8.3:11340380-11340399 | MS.gene58275:CDS | 50.0% | |
| TCTTCCAATTCTGCAGCAGC+TGG | + | chr8.3:11343431-11343450 | None:intergenic | 50.0% | |
| TGCATGTTTGACGATGTCGC+TGG | + | chr8.3:11343783-11343802 | None:intergenic | 50.0% | |
| TGGTATTCAGGCTGGAGGTT+TGG | - | chr8.3:11344680-11344699 | MS.gene58275:CDS | 50.0% | |
| TGTCATTCACCGTGCTCTGA+GGG | - | chr8.3:11341376-11341395 | MS.gene58275:intron | 50.0% | |
| TGTTCCAGCTGCTGCAGAAT+TGG | - | chr8.3:11343424-11343443 | MS.gene58275:CDS | 50.0% | |
| TTCGGAACTATTGCTCCCTG+GGG | + | chr8.3:11342780-11342799 | None:intergenic | 50.0% | |
| TTGTCATTCACCGTGCTCTG+AGG | - | chr8.3:11341375-11341394 | MS.gene58275:intron | 50.0% | |
| TTTCGTATGCTGCAGCCACA+AGG | - | chr8.3:11342104-11342123 | MS.gene58275:intron | 50.0% | |
| ! | AGCGAGAGCATGGATGCAAT+AGG | + | chr8.3:11340789-11340808 | None:intergenic | 50.0% |
| ! | CAACCACCACCCTGAACTTT+TGG | - | chr8.3:11343265-11343284 | MS.gene58275:intron | 50.0% |
| ! | CCTTTTGGTATTCAGGCTGG+AGG | - | chr8.3:11344675-11344694 | MS.gene58275:CDS | 50.0% |
| !! | TTGGCTTTAGCCATCGTTCC+CGG | - | chr8.3:11343461-11343480 | MS.gene58275:intron | 50.0% |
| AAGAGCCAATTCCCACCCAG+CGG | + | chr8.3:11344155-11344174 | None:intergenic | 55.0% | |
| ACTCTGACAGTCTCTCAGCC+TGG | + | chr8.3:11342551-11342570 | None:intergenic | 55.0% | |
| ATACAGAAGGGTTGGGCTGC+AGG | - | chr8.3:11342445-11342464 | MS.gene58275:intron | 55.0% | |
| ATGCAAATGGAACCGCTGGG+TGG | - | chr8.3:11344140-11344159 | MS.gene58275:intron | 55.0% | |
| CAATAGGCAACGTCAGCCCT+AGG | + | chr8.3:11340773-11340792 | None:intergenic | 55.0% | |
| GCACGTTCCTCCTTCACTTC+TGG | + | chr8.3:11343193-11343212 | None:intergenic | 55.0% | |
| GGGAACGATGGCTAAAGCCA+AGG | + | chr8.3:11343462-11343481 | None:intergenic | 55.0% | |
| TCACAGGTTCAGACGGTGGA+GGG | + | chr8.3:11343225-11343244 | None:intergenic | 55.0% | |
| TGCAAATGGAACCGCTGGGT+GGG | - | chr8.3:11344141-11344160 | MS.gene58275:intron | 55.0% | |
| TTCACAGGTTCAGACGGTGG+AGG | + | chr8.3:11343226-11343245 | None:intergenic | 55.0% | |
| ! | GTTCAGGGTGGTGGTTGTAC+TGG | + | chr8.3:11343262-11343281 | None:intergenic | 55.0% |
| ACAGGTTCAGACGGTGGAGG+GGG | + | chr8.3:11343223-11343242 | None:intergenic | 60.0% | |
| CACAGGTTCAGACGGTGGAG+GGG | + | chr8.3:11343224-11343243 | None:intergenic | 60.0% | |
| GATCCACCTCCCTCAGAGCA+CGG | + | chr8.3:11341388-11341407 | None:intergenic | 60.0% | |
| TGGAACCGCTGGGTGGGAAT+TGG | - | chr8.3:11344147-11344166 | MS.gene58275:intron | 60.0% | |
| ! | CAGGGTGGTGGTTGTACTGG+TGG | + | chr8.3:11343259-11343278 | None:intergenic | 60.0% |
| !! | CATTCACCGTGCTCTGAGGG+AGG | - | chr8.3:11341379-11341398 | MS.gene58275:intron | 60.0% |
| !! | TCACCGTGCTCTGAGGGAGG+TGG | - | chr8.3:11341382-11341401 | MS.gene58275:intron | 65.0% |
| TCAGACGGTGGAGGGGGCGA+GGG | + | chr8.3:11343217-11343236 | None:intergenic | 70.0% | |
| TTCAGACGGTGGAGGGGGCG+AGG | + | chr8.3:11343218-11343237 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 11340348 | 11344742 | 11340348 | ID=MS.gene58275 |
| chr8.3 | mRNA | 11340348 | 11344742 | 11340348 | ID=MS.gene58275.t1;Parent=MS.gene58275 |
| chr8.3 | exon | 11344673 | 11344742 | 11344673 | ID=MS.gene58275.t1.exon1;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11344673 | 11344742 | 11344673 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11344252 | 11344349 | 11344252 | ID=MS.gene58275.t1.exon2;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11344252 | 11344349 | 11344252 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11343591 | 11343734 | 11343591 | ID=MS.gene58275.t1.exon3;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11343591 | 11343734 | 11343591 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11343403 | 11343474 | 11343403 | ID=MS.gene58275.t1.exon4;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11343403 | 11343474 | 11343403 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11343070 | 11343153 | 11343070 | ID=MS.gene58275.t1.exon5;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11343070 | 11343153 | 11343070 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11342921 | 11342971 | 11342921 | ID=MS.gene58275.t1.exon6;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11342921 | 11342971 | 11342921 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11342785 | 11342833 | 11342785 | ID=MS.gene58275.t1.exon7;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11342785 | 11342833 | 11342785 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11342624 | 11342679 | 11342624 | ID=MS.gene58275.t1.exon8;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11342624 | 11342679 | 11342624 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11342461 | 11342538 | 11342461 | ID=MS.gene58275.t1.exon9;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11342461 | 11342538 | 11342461 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11342283 | 11342361 | 11342283 | ID=MS.gene58275.t1.exon10;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11342283 | 11342361 | 11342283 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11341829 | 11341902 | 11341829 | ID=MS.gene58275.t1.exon11;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11341829 | 11341902 | 11341829 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11341608 | 11341680 | 11341608 | ID=MS.gene58275.t1.exon12;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11341608 | 11341680 | 11341608 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11340867 | 11340980 | 11340867 | ID=MS.gene58275.t1.exon13;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11340867 | 11340980 | 11340867 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| chr8.3 | exon | 11340348 | 11340400 | 11340348 | ID=MS.gene58275.t1.exon14;Parent=MS.gene58275.t1 |
| chr8.3 | CDS | 11340348 | 11340400 | 11340348 | ID=cds.MS.gene58275.t1;Parent=MS.gene58275.t1 |
| Gene Sequence |
| Protein sequence |
